Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:28 (3134956): wrapper (7.7.26015): starting
00:03:28 (3134956): wrapper: running run_atlas (--nthreads 8)
[2026-03-11 00:03:28] Arguments: --nthreads 8
[2026-03-11 00:03:28] Threads: 8
[2026-03-11 00:03:28] Checking for CVMFS
[2026-03-11 00:03:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 00:03:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 00:03:31] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 00:03:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 00:03:33] 2.13.3.0 8593 107087 414420 157140 3 89 21515268 39288832 21110 16776704 0 257355180 99.588 315185245 30471 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-11 00:03:33] CVMFS is ok
[2026-03-11 00:03:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 00:03:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-11 00:03:33] Further information can be found at the LHC@home message board.
[2026-03-11 00:03:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 00:03:33] Checking for apptainer binary...
[2026-03-11 00:03:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 00:03:33] Running /usr/bin/apptainer --version
[2026-03-11 00:03:34] apptainer version 1.4.5-2.el9
[2026-03-11 00:03:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 00:03:35] c-211-25.aglt2.org
[2026-03-11 00:03:35] apptainer works
[2026-03-11 00:03:36] Set ATHENA_PROC_NUMBER=8
[2026-03-11 00:03:36] Set ATHENA_CORE_NUMBER=8
[2026-03-11 00:03:36] Starting ATLAS job with PandaID=7049312436
[2026-03-11 00:03:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 13:12:17]  *** The last 200 lines of the pilot log: ***
[2026-03-12 13:12:17] 2026-03-12 17:10:59,197 | INFO     | sum of deviations: 4133678584340.2803
[2026-03-12 13:12:17] 2026-03-12 17:10:59,197 | INFO     | mean x: 1773268644.348325
[2026-03-12 13:12:17] 2026-03-12 17:10:59,198 | INFO     | mean y: 2489625.460761817
[2026-03-12 13:12:17] 2026-03-12 17:10:59,198 | INFO     | intersect: -2282364128.521537
[2026-03-12 13:12:17] 2026-03-12 17:10:59,224 | INFO     | chi2: 9.171349384801728
[2026-03-12 13:12:17] 2026-03-12 17:10:59,230 | INFO     | current chi2=9.171349384801728 (change=13.980033845933143 %)
[2026-03-12 13:12:17] 2026-03-12 17:10:59,230 | INFO     | right removable region: 2178
[2026-03-12 13:12:17] 2026-03-12 17:10:59,244 | INFO     | sum of square deviations: 3208133862979.225
[2026-03-12 13:12:17] 2026-03-12 17:11:01,611 | INFO     | sum of deviations: 3106720644952.5103
[2026-03-12 13:12:17] 2026-03-12 17:11:01,611 | INFO     | mean x: 1773268949.3492427
[2026-03-12 13:12:17] 2026-03-12 17:11:01,611 | INFO     | mean y: 2492856.975676916
[2026-03-12 13:12:17] 2026-03-12 17:11:01,612 | INFO     | intersect: -1714720790.9861863
[2026-03-12 13:12:17] 2026-03-12 17:11:01,713 | INFO     | chi2: 6.488752445185559
[2026-03-12 13:12:17] 2026-03-12 17:11:01,713 | INFO     | current chi2=6.488752445185559 (change=39.1406605180763 %)
[2026-03-12 13:12:17] 2026-03-12 17:11:02,036 | INFO     | monitor loop #5163: job 0:7049312436 is in state 'finished'
[2026-03-12 13:12:17] 2026-03-12 17:11:02,036 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-12 13:12:17] 2026-03-12 17:11:02,038 | INFO     | sum of square deviations: 3186099278727.5996
[2026-03-12 13:12:17] 2026-03-12 17:11:03,869 | INFO     | sum of deviations: 2561082158603.586
[2026-03-12 13:12:17] 2026-03-12 17:11:03,869 | INFO     | mean x: 1773269101.852346
[2026-03-12 13:12:17] 2026-03-12 17:11:03,869 | INFO     | mean y: 2496633.110855566
[2026-03-12 13:12:17] 2026-03-12 17:11:03,869 | INFO     | intersect: -1422910255.3307176
[2026-03-12 13:12:17] 2026-03-12 17:11:03,878 | INFO     | chi2: 4.331004665281159
[2026-03-12 13:12:17] 2026-03-12 17:11:03,879 | INFO     | current chi2=4.331004665281159 (change=33.25366159569515 %)
[2026-03-12 13:12:17] 2026-03-12 17:11:03,882 | INFO     | sum of square deviations: 3164166210252.086
[2026-03-12 13:12:17] 2026-03-12 17:11:04,642 | INFO     | monitor loop #5164: job 0:7049312436 is in state 'finished'
[2026-03-12 13:12:17] 2026-03-12 17:11:04,642 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-12 13:12:17] 2026-03-12 17:11:06,377 | INFO     | sum of deviations: 2157480192903.401
[2026-03-12 13:12:17] 2026-03-12 17:11:06,377 | INFO     | mean x: 1773269254.3540802
[2026-03-12 13:12:17] 2026-03-12 17:11:06,377 | INFO     | mean y: 2499438.9096357767
[2026-03-12 13:12:17] 2026-03-12 17:11:06,378 | INFO     | intersect: -1206600538.3790774
[2026-03-12 13:12:17] 2026-03-12 17:11:06,483 | INFO     | chi2: 3.159792402837451
[2026-03-12 13:12:17] 2026-03-12 17:11:06,484 | INFO     | current chi2=3.159792402837451 (change=27.04250752331332 %)
[2026-03-12 13:12:17] 2026-03-12 17:11:06,496 | INFO     | sum of square deviations: 3142333895446.3037
[2026-03-12 13:12:17] 2026-03-12 17:11:07,392 | INFO     | monitor loop #5165: job 0:7049312436 is in state 'finished'
[2026-03-12 13:12:17] 2026-03-12 17:11:07,397 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-12 13:12:17] 2026-03-12 17:11:07,495 | INFO     | sum of deviations: 1919896333602.3105
[2026-03-12 13:12:17] 2026-03-12 17:11:07,496 | INFO     | mean x: 1773269406.8562846
[2026-03-12 13:12:17] 2026-03-12 17:11:07,593 | INFO     | mean y: 2501098.4736598893
[2026-03-12 13:12:17] 2026-03-12 17:11:07,593 | INFO     | intersect: -1080927189.5405858
[2026-03-12 13:12:17] 2026-03-12 17:11:07,597 | INFO     | chi2: 2.778898625298615
[2026-03-12 13:12:17] 2026-03-12 17:11:07,648 | INFO     | current chi2=2.778898625298615 (change=12.05439247201172 %)
[2026-03-12 13:12:17] 2026-03-12 17:11:07,648 | INFO     | left removable region: 40
[2026-03-12 13:12:17] 2026-03-12 17:11:07,651 | INFO     | sum of square deviations: 3030426412649.007
[2026-03-12 13:12:17] 2026-03-12 17:11:08,710 | INFO     | PID=3158435 has CPU usage=10.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-12 13:12:17] 2026-03-12 17:11:08,710 | INFO     | .. there are 40 such processes running
[2026-03-12 13:12:17] 2026-03-12 17:11:09,087 | INFO     | sum of deviations: 1444916895591.0186
[2026-03-12 13:12:17] 2026-03-12 17:11:09,087 | INFO     | mean x: 1773269833.8666978
[2026-03-12 13:12:17] 2026-03-12 17:11:09,088 | INFO     | mean y: 2508413.6772684753
[2026-03-12 13:12:17] 2026-03-12 17:11:09,088 | INFO     | intersect: -842992250.0910798
[2026-03-12 13:12:17] 2026-03-12 17:11:09,095 | INFO     | chi2: 0.2823899594914496
[2026-03-12 13:12:17] 2026-03-12 17:11:09,095 | INFO     | current memory leak: 0.48 B/s (using 2138 data points, chi2=0.28)
[2026-03-12 13:12:17] 2026-03-12 17:11:09,097 | INFO     | could have reported an average CPU frequency of 2900 MHz (77 samples)
[2026-03-12 13:12:17] 2026-03-12 17:11:09,097 | INFO     | ..............................
[2026-03-12 13:12:17] 2026-03-12 17:11:09,097 | INFO     | . Timing measurements:
[2026-03-12 13:12:17] 2026-03-12 17:11:09,098 | INFO     | . get job = 1 s
[2026-03-12 13:12:17] 2026-03-12 17:11:09,098 | INFO     | . initial setup = 88 s
[2026-03-12 13:12:17] 2026-03-12 17:11:09,102 | INFO     | . payload setup = 86 s
[2026-03-12 13:12:17] 2026-03-12 17:11:09,102 | INFO     | . stage-in = 2 s
[2026-03-12 13:12:17] 2026-03-12 17:11:09,102 | INFO     | . payload execution = 133287 s
[2026-03-12 13:12:17] 2026-03-12 17:11:09,103 | INFO     | . stage-out = 13 s
[2026-03-12 13:12:17] 2026-03-12 17:11:09,103 | INFO     | . log creation = 5 s
[2026-03-12 13:12:17] 2026-03-12 17:11:09,103 | INFO     | ..............................
[2026-03-12 13:12:17] 2026-03-12 17:11:09,717 | INFO     | time since job start (133429s) is within the limit (345600.0s)
[2026-03-12 13:12:17] 2026-03-12 17:11:10,338 | INFO     | 
[2026-03-12 13:12:17] 2026-03-12 17:11:10,338 | INFO     | job summary report
[2026-03-12 13:12:17] 2026-03-12 17:11:10,338 | INFO     | --------------------------------------------------
[2026-03-12 13:12:17] 2026-03-12 17:11:10,339 | INFO     | PanDA job id: 7049312436
[2026-03-12 13:12:17] 2026-03-12 17:11:10,339 | INFO     | task id: 48967085
[2026-03-12 13:12:17] 2026-03-12 17:11:10,339 | INFO     | errors: (none)
[2026-03-12 13:12:17] 2026-03-12 17:11:10,339 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 13:12:17] 2026-03-12 17:11:10,339 | INFO     | pilot state: finished 
[2026-03-12 13:12:17] 2026-03-12 17:11:10,339 | INFO     | transexitcode: 0
[2026-03-12 13:12:17] 2026-03-12 17:11:10,340 | INFO     | exeerrorcode: 0
[2026-03-12 13:12:17] 2026-03-12 17:11:10,340 | INFO     | exeerrordiag: 
[2026-03-12 13:12:17] 2026-03-12 17:11:10,340 | INFO     | exitcode: 0
[2026-03-12 13:12:17] 2026-03-12 17:11:10,340 | INFO     | exitmsg: OK
[2026-03-12 13:12:17] 2026-03-12 17:11:10,340 | INFO     | cpuconsumptiontime: 97557 s
[2026-03-12 13:12:17] 2026-03-12 17:11:10,340 | INFO     | nevents: 400
[2026-03-12 13:12:17] 2026-03-12 17:11:10,340 | INFO     | neventsw: 0
[2026-03-12 13:12:17] 2026-03-12 17:11:10,341 | INFO     | pid: 3188855
[2026-03-12 13:12:17] 2026-03-12 17:11:10,341 | INFO     | pgrp: 3188855
[2026-03-12 13:12:17] 2026-03-12 17:11:10,341 | INFO     | corecount: 8
[2026-03-12 13:12:17] 2026-03-12 17:11:10,341 | INFO     | event service: False
[2026-03-12 13:12:17] 2026-03-12 17:11:10,341 | INFO     | sizes: {0: 2279146, 2: 2279747, 3: 2279831, 4: 2279859, 5: 2279859, 8: 2279859, 9: 2280476, 11: 2280504, 13: 2280532, 133379: 2360447, 133381: 2360446, 133397: 236
[2026-03-12 13:12:17] 2026-03-12 17:11:10,341 | INFO     | --------------------------------------------------
[2026-03-12 13:12:17] 2026-03-12 17:11:10,341 | INFO     | 
[2026-03-12 13:12:17] 2026-03-12 17:11:10,342 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-12 13:12:17] 2026-03-12 17:11:10,488 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 13:12:17] 2026-03-12 17:11:10,489 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 13:12:17] 2026-03-12 17:11:10,489 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 13:12:17] 2026-03-12 17:11:10,489 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 13:12:17] 2026-03-12 17:11:10,489 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 13:12:17] 2026-03-12 17:11:10,489 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 13:12:17] 2026-03-12 17:11:10,489 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 13:12:17] 2026-03-12 17:11:10,490 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 13:12:17] 2026-03-12 17:11:10,490 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 13:12:17] 2026-03-12 17:11:10,490 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 13:12:17] 2026-03-12 17:11:10,490 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 13:12:17] 2026-03-12 17:11:10,493 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 13:12:17] 2026-03-12 17:11:10,493 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 13:12:17] 2026-03-12 17:11:10,493 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 13:12:17] 2026-03-12 17:11:10,493 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 13:12:17] 2026-03-12 17:11:10,494 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 13:12:17] 2026-03-12 17:11:10,494 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 13:12:17] 2026-03-12 17:11:10,494 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 13:12:17] 2026-03-12 17:11:10,494 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 13:12:17] 2026-03-12 17:11:10,494 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 13:12:17] 2026-03-12 17:11:10,495 | INFO     | job 7049312436 has completed (purged errors)
[2026-03-12 13:12:17] 2026-03-12 17:11:10,495 | INFO     | overall cleanup function is called
[2026-03-12 13:12:17] 2026-03-12 17:11:11,507 | INFO     | --- collectZombieJob: --- 10, [3188855]
[2026-03-12 13:12:17] 2026-03-12 17:11:11,507 | INFO     | zombie collector waiting for pid 3188855
[2026-03-12 13:12:17] 2026-03-12 17:11:11,507 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 13:12:17] 2026-03-12 17:11:11,508 | INFO     | collected zombie processes
[2026-03-12 13:12:17] 2026-03-12 17:11:11,508 | INFO     | will attempt to kill all subprocesses of pid=3188855
[2026-03-12 13:12:17] 2026-03-12 17:11:17,082 | INFO     | process IDs to be killed: [3188855] (in reverse order)
[2026-03-12 13:12:17] 2026-03-12 17:11:18,303 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 13:12:17] 2026-03-12 17:11:18,303 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 13:12:17] 2026-03-12 17:11:18,661 | INFO     | did not find any defunct processes belonging to 3188855
[2026-03-12 13:12:17] 2026-03-12 17:11:19,148 | INFO     | did not find any defunct processes belonging to 3188855
[2026-03-12 13:12:17] 2026-03-12 17:11:19,148 | INFO     | ready for new job
[2026-03-12 13:12:17] 2026-03-12 17:11:19,148 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 13:12:17] 2026-03-12 17:11:19,212 | INFO     | **************************************
[2026-03-12 13:12:17] 2026-03-12 17:11:19,213 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-12 13:12:17] 2026-03-12 17:11:19,213 | INFO     | **************************************
[2026-03-12 13:12:17] 2026-03-12 17:11:19,217 | INFO     | 
[2026-03-12 13:12:17] 2026-03-12 17:11:19,219 | INFO     | architecture information:
[2026-03-12 13:12:17] 2026-03-12 17:11:19,235 | INFO     | executing command: cat /etc/os-release
[2026-03-12 13:12:17] 2026-03-12 17:11:19,361 | INFO     | cat /etc/os-release:
[2026-03-12 13:12:17] NAME="CentOS Linux"
[2026-03-12 13:12:17] VERSION="7 (Core)"
[2026-03-12 13:12:17] ID="centos"
[2026-03-12 13:12:17] ID_LIKE="rhel fedora"
[2026-03-12 13:12:17] VERSION_ID="7"
[2026-03-12 13:12:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 13:12:17] ANSI_COLOR="0;31"
[2026-03-12 13:12:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 13:12:17] HOME_URL="https://www.centos.org/"
[2026-03-12 13:12:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 13:12:17] 
[2026-03-12 13:12:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 13:12:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 13:12:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 13:12:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 13:12:17] 
[2026-03-12 13:12:17] 2026-03-12 17:11:19,362 | INFO     | **************************************
[2026-03-12 13:12:17] 2026-03-12 17:11:19,866 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-12 13:12:17] 2026-03-12 17:11:20,062 | INFO     | sufficient remaining disk space (52592377856 B)
[2026-03-12 13:12:17] 2026-03-12 17:11:20,063 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 13:12:17] 2026-03-12 17:11:20,063 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 13:12:17] 2026-03-12 17:11:20,063 | INFO     | update_server=False
[2026-03-12 13:12:17] 2026-03-12 17:11:20,063 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 13:12:17] 2026-03-12 17:11:20,076 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 13:12:17] 2026-03-12 17:11:20,076 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 13:12:17] 2026-03-12 17:11:20,077 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 13:12:17] 2026-03-12 17:11:20,117 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-12 13:12:17] 2026-03-12 17:11:20,117 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-12 13:12:17] 2026-03-12 17:11:20,118 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 13:12:17] 2026-03-12 17:11:20,118 | INFO     | will abort loop
[2026-03-12 13:12:17] 2026-03-12 17:11:20,960 | INFO     | all job control threads have been joined
[2026-03-12 13:12:17] 2026-03-12 17:11:21,069 | INFO     | [job] retrieve thread has finished
[2026-03-12 13:12:17] 2026-03-12 17:11:21,082 | INFO     | [job] queue monitor thread has finished
[2026-03-12 13:12:17] 2026-03-12 17:11:21,124 | INFO     | [job] job monitor thread has finished
[2026-03-12 13:12:17] 2026-03-12 17:11:21,130 | INFO     | all data control threads have been joined
[2026-03-12 13:12:17] 2026-03-12 17:11:21,331 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 13:12:17] 2026-03-12 17:11:21,342 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 13:12:17] 2026-03-12 17:11:21,411 | INFO     | [job] validate thread has finished
[2026-03-12 13:12:17] 2026-03-12 17:11:21,609 | INFO     | all payload control threads have been joined
[2026-03-12 13:12:17] 2026-03-12 17:11:21,611 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 13:12:17] 2026-03-12 17:11:21,819 | INFO     | [data] copytool_in thread has finished
[2026-03-12 13:12:17] 2026-03-12 17:11:21,820 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 13:12:17] 2026-03-12 17:11:21,966 | INFO     | [job] control thread has finished
[2026-03-12 13:12:17] 2026-03-12 17:11:22,083 | INFO     | [payload] validate_post thread has finished
[2026-03-12 13:12:17] 2026-03-12 17:11:22,084 | INFO     | [data] copytool_out thread has finished
[2026-03-12 13:12:17] 2026-03-12 17:11:22,142 | INFO     | [data] control thread has finished
[2026-03-12 13:12:17] 2026-03-12 17:11:22,447 | INFO     | [payload] failed_post thread has finished
[2026-03-12 13:12:17] 2026-03-12 17:11:22,615 | INFO     | [payload] control thread has finished
[2026-03-12 13:12:17] 2026-03-12 17:11:24,092 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 13:12:17] 2026-03-12 17:11:43,902 | INFO     | PID=3158435 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 13:12:17] 2026-03-12 17:11:43,902 | INFO     | .. there are 40 such processes running
[2026-03-12 13:12:17] 2026-03-12 17:11:43,902 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 13:12:17] 2026-03-12 17:11:43,903 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 13:12:17] 2026-03-12 17:11:43,903 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 13:12:17] 2026-03-12 17:11:57,953 | INFO     | [monitor] cgroup control has ended
[2026-03-12 13:12:17] 2026-03-12 17:11:58,955 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140013654091584)>', '<ExcThread(monitor, started 140013274638080)>']
[2026-03-12 13:12:17] 2026-03-12 17:11:59,139 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 13:12:17] 2026-03-12 17:11:59,139 | INFO     | [monitor] control thread has ended
[2026-03-12 13:12:17] 2026-03-12 17:12:03,995 | INFO     | all workflow threads have been joined
[2026-03-12 13:12:17] 2026-03-12 17:12:03,995 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 13:12:17] 2026-03-12 17:12:03,996 | INFO     | traces error code: 0
[2026-03-12 13:12:17] 2026-03-12 17:12:03,996 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 13:12:17] 2026-03-12 17:12:04,520 [wrapper] ==== pilot stdout END ====
[2026-03-12 13:12:17] 2026-03-12 17:12:04,525 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 13:12:17] 2026-03-12 17:12:04,529 [wrapper] pilotpid: 3158435
[2026-03-12 13:12:17] 2026-03-12 17:12:04,553 [wrapper] Pilot exit status: 0
[2026-03-12 13:12:17] 2026-03-12 17:12:04,731 [wrapper] pandaids: 7049312436
[2026-03-12 13:12:17] 2026-03-12 17:12:04,948 [wrapper] cleanup supervisor_pilot  385348 3158436
[2026-03-12 13:12:17] 2026-03-12 17:12:04,994 [wrapper] Test setup, not cleaning
[2026-03-12 13:12:17] 2026-03-12 17:12:05,023 [wrapper] apfmon messages muted
[2026-03-12 13:12:17] 2026-03-12 17:12:05,048 [wrapper] ==== wrapper stdout END ====
[2026-03-12 13:12:17] 2026-03-12 17:12:05,097 [wrapper] ==== wrapper stderr END ====
[2026-03-12 13:12:17]  *** Error codes and diagnostics ***
[2026-03-12 13:12:17]     "exeErrorCode": 0,
[2026-03-12 13:12:17]     "exeErrorDiag": "",
[2026-03-12 13:12:17]     "pilotErrorCode": 0,
[2026-03-12 13:12:17]     "pilotErrorDiag": "",
[2026-03-12 13:12:17]  *** Listing of results directory ***
[2026-03-12 13:12:17] total 433904
[2026-03-12 13:12:17] -rwx------. 1 boincer umatlas     36322 Mar 10 21:23 runpilot2-wrapper.sh
[2026-03-12 13:12:17] -rw-r--r--. 1 boincer umatlas      5111 Mar 10 21:23 queuedata.json
[2026-03-12 13:12:17] -rw-r--r--. 1 boincer umatlas    585013 Mar 10 21:23 pilot3.tar.gz
[2026-03-12 13:12:17] -rw-r--r--. 1 boincer umatlas       100 Mar 11 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 13:12:17] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 11 00:03 run_atlas
[2026-03-12 13:12:17] -rw-r--r--. 1 boincer umatlas       105 Mar 11 00:03 job.xml
[2026-03-12 13:12:17] -rw-r--r--. 2 boincer umatlas 213351300 Mar 11 00:03 EVNT.48967083._000156.pool.root.1
[2026-03-12 13:12:17] -rw-r--r--. 2 boincer umatlas     15845 Mar 11 00:03 start_atlas.sh
[2026-03-12 13:12:17] drwxrwx--x. 2 boincer umatlas      4096 Mar 11 00:03 shared
[2026-03-12 13:12:17] -rw-r--r--. 2 boincer umatlas    597496 Mar 11 00:03 input.tar.gz
[2026-03-12 13:12:17] -rw-r--r--. 1 boincer umatlas         0 Mar 11 00:03 boinc_lockfile
[2026-03-12 13:12:17] -rw-r--r--. 1 boincer umatlas      2560 Mar 11 00:03 pandaJob.out
[2026-03-12 13:12:17] -rw-------. 1 boincer umatlas        57 Mar 11 00:03 setup.sh.local
[2026-03-12 13:12:17] -rw-------. 1 boincer umatlas       442 Mar 11 00:07 workernode_map.json
[2026-03-12 13:12:17] -rw-------. 1 boincer umatlas   1006644 Mar 11 00:07 agis_schedconf.cvmfs.json
[2026-03-12 13:12:17] drwx------. 5 boincer umatlas      4096 Mar 11 00:07 pilot3
[2026-03-12 13:12:17] -rw-------. 1 boincer umatlas 198653098 Mar 12 13:08 HITS.48967085._003877.pool.root.1
[2026-03-12 13:12:17] -rw-r--r--. 1 boincer umatlas       532 Mar 12 13:08 boinc_task_state.xml
[2026-03-12 13:12:17] -rw-------. 1 boincer umatlas      1045 Mar 12 13:10 memory_monitor_summary.json
[2026-03-12 13:12:17] -rw-------. 1 boincer umatlas   1511578 Mar 12 13:10 agis_ddmendpoints.agis.ALL.json
[2026-03-12 13:12:17] -rw-------. 1 boincer umatlas   1636142 Mar 12 13:10 log.48967085._003877.job.log.tgz.1
[2026-03-12 13:12:17] -rw-------. 1 boincer umatlas        95 Mar 12 13:10 pilot_heartbeat.json
[2026-03-12 13:12:17] -rw-------. 1 boincer umatlas      6394 Mar 12 13:11 heartbeat.json
[2026-03-12 13:12:17] -rw-r--r--. 1 boincer umatlas      6525 Mar 12 13:11 init_data.xml
[2026-03-12 13:12:17] -rw-------. 1 boincer umatlas      5006 Mar 12 13:12 pilotlog.txt
[2026-03-12 13:12:17] -rw-------. 1 boincer umatlas  12550085 Mar 12 13:12 log.48967085._003877.job.log.1
[2026-03-12 13:12:17] -rw-------. 1 boincer umatlas       357 Mar 12 13:12 output.list
[2026-03-12 13:12:17] -rw-r--r--. 1 boincer umatlas       620 Mar 12 13:12 runtime_log
[2026-03-12 13:12:17] -rw-------. 1 boincer umatlas  14202880 Mar 12 13:12 result.tar.gz
[2026-03-12 13:12:17] -rw-r--r--. 1 boincer umatlas      9343 Mar 12 13:12 runtime_log.err
[2026-03-12 13:12:17] -rw-------. 1 boincer umatlas       662 Mar 12 13:12 fcrNDmTTNK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmIxeLDmrIRMDn.diag
[2026-03-12 13:12:17] -rw-r--r--. 1 boincer umatlas      8192 Mar 12 13:12 boinc_mmap_file
[2026-03-12 13:12:17] -rw-r--r--. 1 boincer umatlas     21456 Mar 12 13:12 stderr.txt
[2026-03-12 13:12:17] -rw-r--r--. 1 boincer umatlas        29 Mar 12 13:12 wrapper_checkpoint.txt
[2026-03-12 13:12:17] HITS file was successfully produced:
[2026-03-12 13:12:17] -rw-------. 1 boincer umatlas 198653098 Mar 12 13:08 shared/HITS.pool.root.1
[2026-03-12 13:12:17]  *** Contents of shared directory: ***
[2026-03-12 13:12:17] total 416832
[2026-03-12 13:12:17] -rw-r--r--. 2 boincer umatlas 213351300 Mar 11 00:03 ATLAS.root_0
[2026-03-12 13:12:17] -rw-r--r--. 2 boincer umatlas     15845 Mar 11 00:03 start_atlas.sh
[2026-03-12 13:12:17] -rw-r--r--. 2 boincer umatlas    597496 Mar 11 00:03 input.tar.gz
[2026-03-12 13:12:17] -rw-------. 1 boincer umatlas 198653098 Mar 12 13:08 HITS.pool.root.1
[2026-03-12 13:12:17] -rw-------. 1 boincer umatlas  14202880 Mar 12 13:12 result.tar.gz
13:12:19 (3134956): run_atlas exited; CPU time 103896.159297
13:12:19 (3134956): called boinc_finish(0)

</stderr_txt>
]]>

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