Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
21:42:30 (559470): wrapper (7.7.26015): starting
21:42:30 (559470): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 21:42:30] Arguments: --nthreads 4
[2026-03-10 21:42:30] Threads: 4
[2026-03-10 21:42:30] Checking for CVMFS
[2026-03-10 21:42:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-10 21:42:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-10 21:42:31] Running cvmfs_config stat atlas.cern.ch
[2026-03-10 21:42:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-10 21:42:32] 2.13.3.0 1760492 6707 50256 157137 3 50 3505566 4096000 1832 130560 0 5387416 99.991 237846 815 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-10 21:42:32] CVMFS is ok
[2026-03-10 21:42:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 21:42:32] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-10 21:42:32] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-10 21:42:32] Further information can be found at the LHC@home message board.
[2026-03-10 21:42:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 21:42:32] Checking for apptainer binary...
[2026-03-10 21:42:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-10 21:42:32] Running /usr/bin/apptainer --version
[2026-03-10 21:42:32] apptainer version 1.4.5
[2026-03-10 21:42:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 21:42:32] OptiPlex7070-Ubuntu
[2026-03-10 21:42:32] apptainer works
[2026-03-10 21:42:32] Set ATHENA_PROC_NUMBER=4
[2026-03-10 21:42:32] Set ATHENA_CORE_NUMBER=4
[2026-03-10 21:42:32] Starting ATLAS job with PandaID=7049177347
[2026-03-10 21:42:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 00:34:11]  *** The last 200 lines of the pilot log: ***
[2026-03-11 00:34:11] 2026-03-11 04:33:05,825 | INFO     | total number of processed events: 400 (read)
[2026-03-11 00:34:11] 2026-03-11 04:33:05,827 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/2/PanDA_Pilot-7049177347/memory_monitor_summary.json (trf name=prmon)
[2026-03-11 00:34:11] 2026-03-11 04:33:05,828 | INFO     | extracted standard info from prmon json
[2026-03-11 00:34:11] 2026-03-11 04:33:05,828 | INFO     | extracted standard memory fields from prmon json
[2026-03-11 00:34:11] 2026-03-11 04:33:05,828 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-11 00:34:11] 2026-03-11 04:33:05,828 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-11 00:34:11] 2026-03-11 04:33:05,828 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-11 00:34:11] 2026-03-11 04:33:05,831 | INFO     | fitting pss+swap vs Time
[2026-03-11 00:34:11] 2026-03-11 04:33:05,831 | INFO     | time since job start (10216s) is within the limit (345600.0s)
[2026-03-11 00:34:11] 2026-03-11 04:33:05,831 | INFO     | sum of square deviations: 1470248962.0
[2026-03-11 00:34:11] 2026-03-11 04:33:05,832 | INFO     | sum of deviations: -48459441148.0
[2026-03-11 00:34:11] 2026-03-11 04:33:05,832 | INFO     | mean x: 1773198481.5
[2026-03-11 00:34:11] 2026-03-11 04:33:05,833 | INFO     | mean y: 2401946.0595238097
[2026-03-11 00:34:11] 2026-03-11 04:33:05,833 | INFO     | intersect: 58447066542.91997
[2026-03-11 00:34:11] 2026-03-11 04:33:05,833 | INFO     | chi2: 2.2936735979565115
[2026-03-11 00:34:11] 2026-03-11 04:33:05,833 | INFO     | sum of square deviations: 1342841922.0
[2026-03-11 00:34:11] 2026-03-11 04:33:05,834 | INFO     | sum of deviations: -36840333351.0
[2026-03-11 00:34:11] 2026-03-11 04:33:05,834 | INFO     | mean x: 1773198329.0
[2026-03-11 00:34:11] 2026-03-11 04:33:05,834 | INFO     | mean y: 2415578.030674847
[2026-03-11 00:34:11] 2026-03-11 04:33:05,834 | INFO     | intersect: 48649405568.11245
[2026-03-11 00:34:11] 2026-03-11 04:33:05,834 | INFO     | chi2: 1.6398902312588002
[2026-03-11 00:34:11] 2026-03-11 04:33:05,835 | INFO     | current chi2=1.6398902312588002 (change=28.50376650279196 %)
[2026-03-11 00:34:11] 2026-03-11 04:33:05,835 | INFO     | sum of square deviations: 1223016419.5
[2026-03-11 00:34:11] 2026-03-11 04:33:05,836 | INFO     | sum of deviations: -34971078844.5
[2026-03-11 00:34:11] 2026-03-11 04:33:05,836 | INFO     | mean x: 1773198176.5
[2026-03-11 00:34:11] 2026-03-11 04:33:05,836 | INFO     | mean y: 2417957.7278481014
[2026-03-11 00:34:11] 2026-03-11 04:33:05,836 | INFO     | intersect: 50705460246.11891
[2026-03-11 00:34:11] 2026-03-11 04:33:05,836 | INFO     | chi2: 1.632453851768711
[2026-03-11 00:34:11] 2026-03-11 04:33:05,836 | INFO     | current chi2=1.632453851768711 (change=0.45346812538671394 %)
[2026-03-11 00:34:11] 2026-03-11 04:33:05,836 | INFO     | right removable region: 157
[2026-03-11 00:34:11] 2026-03-11 04:33:05,836 | INFO     | sum of square deviations: 1342841922.0
[2026-03-11 00:34:11] 2026-03-11 04:33:05,837 | INFO     | sum of deviations: -66288222004.00002
[2026-03-11 00:34:11] 2026-03-11 04:33:05,837 | INFO     | mean x: 1773198634.0
[2026-03-11 00:34:11] 2026-03-11 04:33:05,837 | INFO     | mean y: 2422833.8650306747
[2026-03-11 00:34:11] 2026-03-11 04:33:05,837 | INFO     | intersect: 87534829129.8472
[2026-03-11 00:34:11] 2026-03-11 04:33:05,838 | INFO     | chi2: 0.9978006872986802
[2026-03-11 00:34:11] 2026-03-11 04:33:05,838 | INFO     | current chi2=0.9978006872986802 (change=56.49770358835517 %)
[2026-03-11 00:34:11] 2026-03-11 04:33:05,838 | INFO     | sum of square deviations: 1223016419.5
[2026-03-11 00:34:11] 2026-03-11 04:33:05,839 | INFO     | sum of deviations: -59379809439.00001
[2026-03-11 00:34:11] 2026-03-11 04:33:05,839 | INFO     | mean x: 1773198786.5
[2026-03-11 00:34:11] 2026-03-11 04:33:05,839 | INFO     | mean y: 2414032.746835443
[2026-03-11 00:34:11] 2026-03-11 04:33:05,839 | INFO     | intersect: 86094640074.06375
[2026-03-11 00:34:11] 2026-03-11 04:33:05,839 | INFO     | chi2: 0.9946589975180389
[2026-03-11 00:34:11] 2026-03-11 04:33:05,839 | INFO     | current chi2=0.9946589975180389 (change=0.3148614568653733 %)
[2026-03-11 00:34:11] 2026-03-11 04:33:05,839 | INFO     | left removable region: 20
[2026-03-11 00:34:11] 2026-03-11 04:33:05,840 | INFO     | sum of square deviations: 797291228.0
[2026-03-11 00:34:11] 2026-03-11 04:33:05,840 | INFO     | sum of deviations: -32520661051.0
[2026-03-11 00:34:11] 2026-03-11 04:33:05,840 | INFO     | mean x: 1773198756.0
[2026-03-11 00:34:11] 2026-03-11 04:33:05,840 | INFO     | mean y: 2411144.802919708
[2026-03-11 00:34:11] 2026-03-11 04:33:05,840 | INFO     | intersect: 72329302116.10413
[2026-03-11 00:34:11] 2026-03-11 04:33:05,841 | INFO     | chi2: 0.28221620712773987
[2026-03-11 00:34:11] 2026-03-11 04:33:05,841 | INFO     | current memory leak: -40.79 B/s (using 137 data points, chi2=0.28)
[2026-03-11 00:34:11] 2026-03-11 04:33:05,841 | INFO     | could have reported an average CPU frequency of 3429 MHz (9 samples)
[2026-03-11 00:34:11] 2026-03-11 04:33:05,841 | INFO     | ..............................
[2026-03-11 00:34:11] 2026-03-11 04:33:05,841 | INFO     | . Timing measurements:
[2026-03-11 00:34:11] 2026-03-11 04:33:05,841 | INFO     | . get job = 0 s
[2026-03-11 00:34:11] 2026-03-11 04:33:05,841 | INFO     | . initial setup = 6 s
[2026-03-11 00:34:11] 2026-03-11 04:33:05,842 | INFO     | . payload setup = 3 s
[2026-03-11 00:34:11] 2026-03-11 04:33:05,842 | INFO     | . stage-in = 0 s
[2026-03-11 00:34:11] 2026-03-11 04:33:05,842 | INFO     | . payload execution = 10196 s
[2026-03-11 00:34:11] 2026-03-11 04:33:05,842 | INFO     | . stage-out = 0 s
[2026-03-11 00:34:11] 2026-03-11 04:33:05,842 | INFO     | . log creation = 0 s
[2026-03-11 00:34:11] 2026-03-11 04:33:05,842 | INFO     | ..............................
[2026-03-11 00:34:11] 2026-03-11 04:33:05,911 | INFO     | 
[2026-03-11 00:34:11] 2026-03-11 04:33:05,911 | INFO     | job summary report
[2026-03-11 00:34:11] 2026-03-11 04:33:05,912 | INFO     | --------------------------------------------------
[2026-03-11 00:34:11] 2026-03-11 04:33:05,912 | INFO     | PanDA job id: 7049177347
[2026-03-11 00:34:11] 2026-03-11 04:33:05,912 | INFO     | task id: 48967011
[2026-03-11 00:34:11] 2026-03-11 04:33:05,912 | INFO     | errors: (none)
[2026-03-11 00:34:11] 2026-03-11 04:33:05,912 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-11 00:34:11] 2026-03-11 04:33:05,912 | INFO     | pilot state: finished 
[2026-03-11 00:34:11] 2026-03-11 04:33:05,912 | INFO     | transexitcode: 0
[2026-03-11 00:34:11] 2026-03-11 04:33:05,912 | INFO     | exeerrorcode: 0
[2026-03-11 00:34:11] 2026-03-11 04:33:05,912 | INFO     | exeerrordiag: 
[2026-03-11 00:34:11] 2026-03-11 04:33:05,912 | INFO     | exitcode: 0
[2026-03-11 00:34:11] 2026-03-11 04:33:05,912 | INFO     | exitmsg: OK
[2026-03-11 00:34:11] 2026-03-11 04:33:05,912 | INFO     | cpuconsumptiontime: 39633 s
[2026-03-11 00:34:11] 2026-03-11 04:33:05,912 | INFO     | nevents: 400
[2026-03-11 00:34:11] 2026-03-11 04:33:05,913 | INFO     | neventsw: 0
[2026-03-11 00:34:11] 2026-03-11 04:33:05,913 | INFO     | pid: 568170
[2026-03-11 00:34:11] 2026-03-11 04:33:05,913 | INFO     | pgrp: 568170
[2026-03-11 00:34:11] 2026-03-11 04:33:05,913 | INFO     | corecount: 4
[2026-03-11 00:34:11] 2026-03-11 04:33:05,913 | INFO     | event service: False
[2026-03-11 00:34:11] 2026-03-11 04:33:05,913 | INFO     | sizes: {0: 2280046, 1: 2280252, 11: 2280280, 10203: 2309095, 10204: 2318177, 10205: 2318379}
[2026-03-11 00:34:11] 2026-03-11 04:33:05,913 | INFO     | --------------------------------------------------
[2026-03-11 00:34:11] 2026-03-11 04:33:05,913 | INFO     | 
[2026-03-11 00:34:11] 2026-03-11 04:33:05,913 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/2
[2026-03-11 00:34:11] 2026-03-11 04:33:05,927 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-11 00:34:11] 2026-03-11 04:33:05,927 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-11 00:34:11] 2026-03-11 04:33:05,928 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-11 00:34:11] 2026-03-11 04:33:05,928 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-11 00:34:11] 2026-03-11 04:33:05,928 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-11 00:34:11] 2026-03-11 04:33:05,928 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-11 00:34:11] 2026-03-11 04:33:05,928 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-11 00:34:11] 2026-03-11 04:33:05,928 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-11 00:34:11] 2026-03-11 04:33:05,928 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-11 00:34:11] 2026-03-11 04:33:05,928 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-11 00:34:11] 2026-03-11 04:33:05,928 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-11 00:34:11] 2026-03-11 04:33:05,928 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-11 00:34:11] 2026-03-11 04:33:05,928 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-11 00:34:11] 2026-03-11 04:33:05,929 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-11 00:34:11] 2026-03-11 04:33:05,929 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-11 00:34:11] 2026-03-11 04:33:05,929 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-11 00:34:11] 2026-03-11 04:33:05,929 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-11 00:34:11] 2026-03-11 04:33:05,929 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-11 00:34:11] 2026-03-11 04:33:05,929 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-11 00:34:11] 2026-03-11 04:33:05,929 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-11 00:34:11] 2026-03-11 04:33:05,929 | INFO     | job 7049177347 has completed (purged errors)
[2026-03-11 00:34:11] 2026-03-11 04:33:05,929 | INFO     | overall cleanup function is called
[2026-03-11 00:34:11] 2026-03-11 04:33:06,936 | INFO     | --- collectZombieJob: --- 10, [568170]
[2026-03-11 00:34:11] 2026-03-11 04:33:06,936 | INFO     | zombie collector waiting for pid 568170
[2026-03-11 00:34:11] 2026-03-11 04:33:06,936 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-11 00:34:11] 2026-03-11 04:33:06,936 | INFO     | collected zombie processes
[2026-03-11 00:34:11] 2026-03-11 04:33:06,936 | INFO     | will attempt to kill all subprocesses of pid=568170
[2026-03-11 00:34:11] 2026-03-11 04:33:07,075 | INFO     | process IDs to be killed: [568170] (in reverse order)
[2026-03-11 00:34:11] 2026-03-11 04:33:07,113 | WARNING  | found no corresponding commands to process id(s)
[2026-03-11 00:34:11] 2026-03-11 04:33:07,113 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-11 00:34:11] 2026-03-11 04:33:07,116 | INFO     | did not find any defunct processes belonging to 568170
[2026-03-11 00:34:11] 2026-03-11 04:33:07,119 | INFO     | did not find any defunct processes belonging to 568170
[2026-03-11 00:34:11] 2026-03-11 04:33:07,120 | INFO     | ready for new job
[2026-03-11 00:34:11] 2026-03-11 04:33:07,120 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-11 00:34:11] 2026-03-11 04:33:07,121 | INFO     | **************************************
[2026-03-11 00:34:11] 2026-03-11 04:33:07,121 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-11 00:34:11] 2026-03-11 04:33:07,121 | INFO     | **************************************
[2026-03-11 00:34:11] 2026-03-11 04:33:07,121 | INFO     | 
[2026-03-11 00:34:11] 2026-03-11 04:33:07,122 | INFO     | architecture information:
[2026-03-11 00:34:11] 2026-03-11 04:33:07,122 | INFO     | executing command: cat /etc/os-release
[2026-03-11 00:34:11] 2026-03-11 04:33:07,138 | INFO     | cat /etc/os-release:
[2026-03-11 00:34:11] NAME="CentOS Linux"
[2026-03-11 00:34:11] VERSION="7 (Core)"
[2026-03-11 00:34:11] ID="centos"
[2026-03-11 00:34:11] ID_LIKE="rhel fedora"
[2026-03-11 00:34:11] VERSION_ID="7"
[2026-03-11 00:34:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-11 00:34:11] ANSI_COLOR="0;31"
[2026-03-11 00:34:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-11 00:34:11] HOME_URL="https://www.centos.org/"
[2026-03-11 00:34:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-11 00:34:11] 
[2026-03-11 00:34:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-11 00:34:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-11 00:34:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-11 00:34:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-11 00:34:11] 
[2026-03-11 00:34:11] 2026-03-11 04:33:07,138 | INFO     | **************************************
[2026-03-11 00:34:11] 2026-03-11 04:33:07,640 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/2
[2026-03-11 00:34:11] 2026-03-11 04:33:07,651 | INFO     | sufficient remaining disk space (411566080000 B)
[2026-03-11 00:34:11] 2026-03-11 04:33:07,651 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-11 00:34:11] 2026-03-11 04:33:07,651 | INFO     | current server update state: UPDATING_FINAL
[2026-03-11 00:34:11] 2026-03-11 04:33:07,651 | INFO     | update_server=False
[2026-03-11 00:34:11] 2026-03-11 04:33:07,652 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-11 00:34:11] 2026-03-11 04:33:07,652 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-11 00:34:11] 2026-03-11 04:33:07,652 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 00:34:11] 2026-03-11 04:33:07,652 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 00:34:11] 2026-03-11 04:33:07,652 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 00:34:11] 2026-03-11 04:33:07,652 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 00:34:11] 2026-03-11 04:33:07,707 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 00:34:11] 2026-03-11 04:33:08,147 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-11 00:34:11] 2026-03-11 04:33:08,147 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-11 00:34:11] 2026-03-11 04:33:08,147 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-11 00:34:11] 2026-03-11 04:33:08,148 | INFO     | will abort loop
[2026-03-11 00:34:11] 2026-03-11 04:33:08,567 | INFO     | all data control threads have been joined
[2026-03-11 00:34:11] 2026-03-11 04:33:08,657 | INFO     | [job] retrieve thread has finished
[2026-03-11 00:34:11] 2026-03-11 04:33:08,657 | INFO     | [job] queue monitor thread has finished
[2026-03-11 00:34:11] 2026-03-11 04:33:08,658 | INFO     | [data] copytool_in thread has finished
[2026-03-11 00:34:11] 2026-03-11 04:33:08,890 | INFO     | all job control threads have been joined
[2026-03-11 00:34:11] 2026-03-11 04:33:09,119 | INFO     | all payload control threads have been joined
[2026-03-11 00:34:11] 2026-03-11 04:33:09,153 | INFO     | [job] job monitor thread has finished
[2026-03-11 00:34:11] 2026-03-11 04:33:09,483 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 00:34:11] 2026-03-11 04:33:09,572 | INFO     | [data] control thread has finished
[2026-03-11 00:34:11] 2026-03-11 04:33:09,686 | INFO     | [job] validate thread has finished
[2026-03-11 00:34:11] 2026-03-11 04:33:09,713 | INFO     | [data] copytool_out thread has finished
[2026-03-11 00:34:11] 2026-03-11 04:33:09,844 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 00:34:11] 2026-03-11 04:33:09,844 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 00:34:11] 2026-03-11 04:33:09,871 | INFO     | [payload] validate_post thread has finished
[2026-03-11 00:34:11] 2026-03-11 04:33:09,895 | INFO     | [job] control thread has finished
[2026-03-11 00:34:11] 2026-03-11 04:33:10,124 | INFO     | [payload] control thread has finished
[2026-03-11 00:34:11] 2026-03-11 04:33:10,147 | INFO     | [payload] failed_post thread has finished
[2026-03-11 00:34:11] 2026-03-11 04:33:10,777 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 00:34:11] 2026-03-11 04:33:14,782 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 00:34:11] 2026-03-11 04:33:17,939 | INFO     | job.realtimelogging is not enabled
[2026-03-11 00:34:11] 2026-03-11 04:33:18,944 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 00:34:11] 2026-03-11 04:34:05,832 | INFO     | [monitor] cgroup control has ended
[2026-03-11 00:34:11] 2026-03-11 04:34:06,040 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130567721895744)>', '<ExcThread(monitor, started 130566871578368)>']
[2026-03-11 00:34:11] 2026-03-11 04:34:06,939 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 00:34:11] 2026-03-11 04:34:06,939 | INFO     | [monitor] control thread has ended
[2026-03-11 00:34:11] 2026-03-11 04:34:11,065 | INFO     | all workflow threads have been joined
[2026-03-11 00:34:11] 2026-03-11 04:34:11,065 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 00:34:11] 2026-03-11 04:34:11,065 | INFO     | traces error code: 0
[2026-03-11 00:34:11] 2026-03-11 04:34:11,065 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 00:34:11] 2026-03-11 04:34:11,143 [wrapper] ==== pilot stdout END ====
[2026-03-11 00:34:11] 2026-03-11 04:34:11,145 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 00:34:11] 2026-03-11 04:34:11,147 [wrapper] pilotpid: 563653
[2026-03-11 00:34:11] 2026-03-11 04:34:11,148 [wrapper] Pilot exit status: 0
[2026-03-11 00:34:11] 2026-03-11 04:34:11,158 [wrapper] pandaids: 7049177347
[2026-03-11 00:34:11] 2026-03-11 04:34:11,182 [wrapper] cleanup supervisor_pilot  629320 563654
[2026-03-11 00:34:11] 2026-03-11 04:34:11,184 [wrapper] Test setup, not cleaning
[2026-03-11 00:34:11] 2026-03-11 04:34:11,186 [wrapper] apfmon messages muted
[2026-03-11 00:34:11] 2026-03-11 04:34:11,187 [wrapper] ==== wrapper stdout END ====
[2026-03-11 00:34:11] 2026-03-11 04:34:11,189 [wrapper] ==== wrapper stderr END ====
[2026-03-11 00:34:11]  *** Error codes and diagnostics ***
[2026-03-11 00:34:11]     "exeErrorCode": 0,
[2026-03-11 00:34:11]     "exeErrorDiag": "",
[2026-03-11 00:34:11]     "pilotErrorCode": 0,
[2026-03-11 00:34:11]     "pilotErrorDiag": "",
[2026-03-11 00:34:11]  *** Listing of results directory ***
[2026-03-11 00:34:11] total 429008
[2026-03-11 00:34:11] -rw-r--r-- 1 whitlerd whitlerd    585013 Mar 10 16:40 pilot3.tar.gz
[2026-03-11 00:34:11] -rwx------ 1 whitlerd whitlerd     36322 Mar 10 17:09 runpilot2-wrapper.sh
[2026-03-11 00:34:11] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar 10 17:09 queuedata.json
[2026-03-11 00:34:11] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar 10 21:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 00:34:11] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar 10 21:42 run_atlas
[2026-03-11 00:34:11] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar 10 21:42 job.xml
[2026-03-11 00:34:11] -rw-r--r-- 2 whitlerd whitlerd 218946103 Mar 10 21:42 EVNT.48967008._000247.pool.root.1
[2026-03-11 00:34:11] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 10 21:42 start_atlas.sh
[2026-03-11 00:34:11] drwxrwx--x 2 whitlerd whitlerd      4096 Mar 10 21:42 shared
[2026-03-11 00:34:11] -rw-r--r-- 2 whitlerd whitlerd    597525 Mar 10 21:42 input.tar.gz
[2026-03-11 00:34:11] -rw-rw-r-- 1 whitlerd whitlerd      6467 Mar 10 21:42 init_data.xml
[2026-03-11 00:34:11] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 10 21:42 boinc_setup_complete
[2026-03-11 00:34:11] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 10 21:42 boinc_lockfile
[2026-03-11 00:34:11] -rw-rw-r-- 1 whitlerd whitlerd      2561 Mar 10 21:42 pandaJob.out
[2026-03-11 00:34:11] -rw------- 1 whitlerd whitlerd   1006644 Mar 10 21:42 agis_schedconf.cvmfs.json
[2026-03-11 00:34:11] -rw------- 1 whitlerd whitlerd   1511578 Mar 10 21:42 agis_ddmendpoints.agis.ALL.json
[2026-03-11 00:34:11] -rw------- 1 whitlerd whitlerd       439 Mar 10 21:42 workernode_map.json
[2026-03-11 00:34:11] drwx------ 5 whitlerd whitlerd      4096 Mar 10 21:42 pilot3
[2026-03-11 00:34:11] -rw------- 1 whitlerd whitlerd        95 Mar 11 00:32 pilot_heartbeat.json
[2026-03-11 00:34:11] -rw------- 1 whitlerd whitlerd 212749549 Mar 11 00:32 HITS.48967011._006292.pool.root.1
[2026-03-11 00:34:11] -rw-rw-r-- 1 whitlerd whitlerd       530 Mar 11 00:32 boinc_task_state.xml
[2026-03-11 00:34:11] -rw------- 1 whitlerd whitlerd      1031 Mar 11 00:33 memory_monitor_summary.json
[2026-03-11 00:34:11] -rw------- 1 whitlerd whitlerd    341480 Mar 11 00:33 log.48967011._006292.job.log.tgz.1
[2026-03-11 00:34:11] -rw------- 1 whitlerd whitlerd      6372 Mar 11 00:33 heartbeat.json
[2026-03-11 00:34:11] -rw-rw-r-- 1 whitlerd whitlerd        28 Mar 11 00:34 wrapper_checkpoint.txt
[2026-03-11 00:34:11] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar 11 00:34 boinc_mmap_file
[2026-03-11 00:34:11] -rw------- 1 whitlerd whitlerd      4821 Mar 11 00:34 pilotlog.txt
[2026-03-11 00:34:11] -rw------- 1 whitlerd whitlerd   1491846 Mar 11 00:34 log.48967011._006292.job.log.1
[2026-03-11 00:34:11] -rw------- 1 whitlerd whitlerd       357 Mar 11 00:34 output.list
[2026-03-11 00:34:11] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar 11 00:34 runtime_log
[2026-03-11 00:34:11] -rw------- 1 whitlerd whitlerd   1853440 Mar 11 00:34 result.tar.gz
[2026-03-11 00:34:11] -rw-rw-r-- 1 whitlerd whitlerd      9055 Mar 11 00:34 runtime_log.err
[2026-03-11 00:34:11] -rw------- 1 whitlerd whitlerd       660 Mar 11 00:34 8NIMDmjVJK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmbNeLDmppTsom.diag
[2026-03-11 00:34:11] -rw-rw-r-- 1 whitlerd whitlerd     21059 Mar 11 00:34 stderr.txt
[2026-03-11 00:34:11] HITS file was successfully produced:
[2026-03-11 00:34:11] -rw------- 1 whitlerd whitlerd 212749549 Mar 11 00:32 shared/HITS.pool.root.1
[2026-03-11 00:34:11]  *** Contents of shared directory: ***
[2026-03-11 00:34:11] total 424000
[2026-03-11 00:34:11] -rw-r--r-- 2 whitlerd whitlerd 218946103 Mar 10 21:42 ATLAS.root_0
[2026-03-11 00:34:11] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 10 21:42 start_atlas.sh
[2026-03-11 00:34:11] -rw-r--r-- 2 whitlerd whitlerd    597525 Mar 10 21:42 input.tar.gz
[2026-03-11 00:34:11] -rw------- 1 whitlerd whitlerd 212749549 Mar 11 00:32 HITS.pool.root.1
[2026-03-11 00:34:11] -rw------- 1 whitlerd whitlerd   1853440 Mar 11 00:34 result.tar.gz
00:34:12 (559470): run_atlas exited; CPU time 39805.902549
00:34:12 (559470): called boinc_finish(0)

</stderr_txt>
]]>

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