Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:35 (3138394): wrapper (7.7.26015): starting
00:03:35 (3138394): wrapper: running run_atlas (--nthreads 8)
[2026-03-11 00:03:36] Arguments: --nthreads 8
[2026-03-11 00:03:36] Threads: 8
[2026-03-11 00:03:36] Checking for CVMFS
[2026-03-11 00:03:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 00:03:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 00:03:38] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 00:03:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 00:03:40] 2.13.3.0 8593 107087 414424 157140 2 89 21515268 39288832 21411 16776704 0 257357007 99.588 315185245 30471 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-11 00:03:40] CVMFS is ok
[2026-03-11 00:03:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 00:03:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-11 00:03:40] Further information can be found at the LHC@home message board.
[2026-03-11 00:03:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 00:03:40] Checking for apptainer binary...
[2026-03-11 00:03:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 00:03:40] Running /usr/bin/apptainer --version
[2026-03-11 00:03:40] apptainer version 1.4.5-2.el9
[2026-03-11 00:03:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 00:03:42] c-211-25.aglt2.org
[2026-03-11 00:03:42] apptainer works
[2026-03-11 00:03:42] Set ATHENA_PROC_NUMBER=8
[2026-03-11 00:03:42] Set ATHENA_CORE_NUMBER=8
[2026-03-11 00:03:42] Starting ATLAS job with PandaID=7049312273
[2026-03-11 00:03:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 13:13:26]  *** The last 200 lines of the pilot log: ***
[2026-03-12 13:13:26] 2026-03-12 17:12:28,334 | INFO     | sum of square deviations: 3216966835584.7563
[2026-03-12 13:13:26] 2026-03-12 17:12:28,534 | INFO     | time since job start (133517s) is within the limit (345600.0s)
[2026-03-12 13:13:26] 2026-03-12 17:12:29,507 | INFO     | sum of deviations: 4856271609724.531
[2026-03-12 13:13:26] 2026-03-12 17:12:29,507 | INFO     | mean x: 1773268704.601559
[2026-03-12 13:13:26] 2026-03-12 17:12:29,508 | INFO     | mean y: 2484852.0765703805
[2026-03-12 13:13:26] 2026-03-12 17:12:29,508 | INFO     | intersect: -2674407670.194091
[2026-03-12 13:13:26] 2026-03-12 17:12:29,538 | INFO     | chi2: 9.800574443204397
[2026-03-12 13:13:26] 2026-03-12 17:12:29,538 | INFO     | current chi2=9.800574443204397 (change=13.42152110105291 %)
[2026-03-12 13:13:26] 2026-03-12 17:12:29,538 | INFO     | right removable region: 2180
[2026-03-12 13:13:26] 2026-03-12 17:12:29,575 | INFO     | sum of square deviations: 3216965235303.9346
[2026-03-12 13:13:26] 2026-03-12 17:12:30,090 | INFO     | monitor loop #5135: job 0:7049312273 is in state 'finished'
[2026-03-12 13:13:26] 2026-03-12 17:12:30,090 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-12 13:13:26] 2026-03-12 17:12:30,172 | INFO     | sum of deviations: 3831245448732.57
[2026-03-12 13:13:26] 2026-03-12 17:12:30,172 | INFO     | mean x: 1773269009.6033928
[2026-03-12 13:13:26] 2026-03-12 17:12:30,172 | INFO     | mean y: 2488102.7336084363
[2026-03-12 13:13:26] 2026-03-12 17:12:30,172 | INFO     | intersect: -2109387011.0736563
[2026-03-12 13:13:26] 2026-03-12 17:12:30,175 | INFO     | chi2: 7.128643050474306
[2026-03-12 13:13:26] 2026-03-12 17:12:30,175 | INFO     | current chi2=7.128643050474306 (change=37.02541871394428 %)
[2026-03-12 13:13:26] 2026-03-12 17:12:30,178 | INFO     | sum of square deviations: 3194890633868.107
[2026-03-12 13:13:26] 2026-03-12 17:12:30,761 | INFO     | time since job start (133519s) is within the limit (345600.0s)
[2026-03-12 13:13:26] 2026-03-12 17:12:31,102 | INFO     | sum of deviations: 3245620654404.9644
[2026-03-12 13:13:26] 2026-03-12 17:12:31,102 | INFO     | mean x: 1773269162.1047795
[2026-03-12 13:13:26] 2026-03-12 17:12:31,102 | INFO     | mean y: 2492148.263327206
[2026-03-12 13:13:26] 2026-03-12 17:12:31,102 | INFO     | intersect: -1798933840.2621546
[2026-03-12 13:13:26] 2026-03-12 17:12:31,184 | INFO     | chi2: 4.643456359151364
[2026-03-12 13:13:26] 2026-03-12 17:12:31,184 | INFO     | current chi2=4.643456359151364 (change=34.861988091234124 %)
[2026-03-12 13:13:26] 2026-03-12 17:12:31,264 | INFO     | sum of square deviations: 3172917244120.279
[2026-03-12 13:13:26] 2026-03-12 17:12:32,740 | INFO     | monitor loop #5136: job 0:7049312273 is in state 'finished'
[2026-03-12 13:13:26] 2026-03-12 17:12:32,740 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-12 13:13:26] 2026-03-12 17:12:34,376 | INFO     | sum of deviations: 2812511531067.0244
[2026-03-12 13:13:26] 2026-03-12 17:12:34,376 | INFO     | mean x: 1773269314.6061723
[2026-03-12 13:13:26] 2026-03-12 17:12:34,376 | INFO     | mean y: 2495153.5204974664
[2026-03-12 13:13:26] 2026-03-12 17:12:34,377 | INFO     | intersect: -1569351828.7035742
[2026-03-12 13:13:26] 2026-03-12 17:12:34,384 | INFO     | chi2: 3.2810932043051184
[2026-03-12 13:13:26] 2026-03-12 17:12:34,384 | INFO     | current chi2=3.2810932043051184 (change=29.339419808722628 %)
[2026-03-12 13:13:26] 2026-03-12 17:12:34,391 | INFO     | sum of square deviations: 3151045230183.5776
[2026-03-12 13:13:26] 2026-03-12 17:12:34,929 | INFO     | sum of deviations: 2599194200115.8853
[2026-03-12 13:13:26] 2026-03-12 17:12:34,930 | INFO     | mean x: 1773269467.1061866
[2026-03-12 13:13:26] 2026-03-12 17:12:34,943 | INFO     | mean y: 2496640.852723915
[2026-03-12 13:13:26] 2026-03-12 17:12:34,943 | INFO     | intersect: -1460215372.924516
[2026-03-12 13:13:26] 2026-03-12 17:12:34,947 | INFO     | chi2: 2.988231854229488
[2026-03-12 13:13:26] 2026-03-12 17:12:34,947 | INFO     | current chi2=2.988231854229488 (change=8.92572480694445 %)
[2026-03-12 13:13:26] 2026-03-12 17:12:34,947 | INFO     | left removable region: 40
[2026-03-12 13:13:26] 2026-03-12 17:12:34,958 | INFO     | sum of square deviations: 3038930012711.199
[2026-03-12 13:13:26] 2026-03-12 17:12:35,322 | INFO     | monitor loop #5137: job 0:7049312273 is in state 'finished'
[2026-03-12 13:13:26] 2026-03-12 17:12:35,322 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-12 13:13:26] 2026-03-12 17:12:36,197 | INFO     | sum of deviations: 2275017665665.9526
[2026-03-12 13:13:26] 2026-03-12 17:12:36,197 | INFO     | mean x: 1773269894.109813
[2026-03-12 13:13:26] 2026-03-12 17:12:36,198 | INFO     | mean y: 2502825.5406542057
[2026-03-12 13:13:26] 2026-03-12 17:12:36,202 | INFO     | intersect: -1325010581.5530038
[2026-03-12 13:13:26] 2026-03-12 17:12:36,205 | INFO     | chi2: 0.854825418936658
[2026-03-12 13:13:26] 2026-03-12 17:12:36,206 | INFO     | current memory leak: 0.75 B/s (using 2140 data points, chi2=0.85)
[2026-03-12 13:13:26] 2026-03-12 17:12:36,212 | INFO     | could have reported an average CPU frequency of 2900 MHz (77 samples)
[2026-03-12 13:13:26] 2026-03-12 17:12:36,212 | INFO     | ..............................
[2026-03-12 13:13:26] 2026-03-12 17:12:36,212 | INFO     | . Timing measurements:
[2026-03-12 13:13:26] 2026-03-12 17:12:36,212 | INFO     | . get job = 1 s
[2026-03-12 13:13:26] 2026-03-12 17:12:36,213 | INFO     | . initial setup = 76 s
[2026-03-12 13:13:26] 2026-03-12 17:12:36,213 | INFO     | . payload setup = 95 s
[2026-03-12 13:13:26] 2026-03-12 17:12:36,213 | INFO     | . stage-in = 2 s
[2026-03-12 13:13:26] 2026-03-12 17:12:36,213 | INFO     | . payload execution = 133363 s
[2026-03-12 13:13:26] 2026-03-12 17:12:36,213 | INFO     | . stage-out = 15 s
[2026-03-12 13:13:26] 2026-03-12 17:12:36,213 | INFO     | . log creation = 7 s
[2026-03-12 13:13:26] 2026-03-12 17:12:36,213 | INFO     | ..............................
[2026-03-12 13:13:26] 2026-03-12 17:12:36,972 | INFO     | 
[2026-03-12 13:13:26] 2026-03-12 17:12:36,972 | INFO     | job summary report
[2026-03-12 13:13:26] 2026-03-12 17:12:36,972 | INFO     | --------------------------------------------------
[2026-03-12 13:13:26] 2026-03-12 17:12:36,972 | INFO     | PanDA job id: 7049312273
[2026-03-12 13:13:26] 2026-03-12 17:12:36,973 | INFO     | task id: 48967085
[2026-03-12 13:13:26] 2026-03-12 17:12:36,973 | INFO     | errors: (none)
[2026-03-12 13:13:26] 2026-03-12 17:12:36,973 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 13:13:26] 2026-03-12 17:12:36,973 | INFO     | pilot state: finished 
[2026-03-12 13:13:26] 2026-03-12 17:12:36,973 | INFO     | transexitcode: 0
[2026-03-12 13:13:26] 2026-03-12 17:12:36,973 | INFO     | exeerrorcode: 0
[2026-03-12 13:13:26] 2026-03-12 17:12:36,973 | INFO     | exeerrordiag: 
[2026-03-12 13:13:26] 2026-03-12 17:12:36,974 | INFO     | exitcode: 0
[2026-03-12 13:13:26] 2026-03-12 17:12:36,974 | INFO     | exitmsg: OK
[2026-03-12 13:13:26] 2026-03-12 17:12:36,974 | INFO     | cpuconsumptiontime: 96001 s
[2026-03-12 13:13:26] 2026-03-12 17:12:36,974 | INFO     | nevents: 400
[2026-03-12 13:13:26] 2026-03-12 17:12:36,974 | INFO     | neventsw: 0
[2026-03-12 13:13:26] 2026-03-12 17:12:36,974 | INFO     | pid: 3190107
[2026-03-12 13:13:26] 2026-03-12 17:12:36,975 | INFO     | pgrp: 3190107
[2026-03-12 13:13:26] 2026-03-12 17:12:36,975 | INFO     | corecount: 8
[2026-03-12 13:13:26] 2026-03-12 17:12:36,975 | INFO     | event service: False
[2026-03-12 13:13:26] 2026-03-12 17:12:36,975 | INFO     | sizes: {0: 2279148, 2: 2279749, 4: 2279833, 6: 2279861, 7: 2279889, 9: 2279889, 10: 2252623, 12: 2280506, 24: 2280534, 133465: 2360366, 133466: 2360365, 133483: 23
[2026-03-12 13:13:26] 2026-03-12 17:12:36,975 | INFO     | --------------------------------------------------
[2026-03-12 13:13:26] 2026-03-12 17:12:36,975 | INFO     | 
[2026-03-12 13:13:26] 2026-03-12 17:12:36,976 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-12 13:13:26] 2026-03-12 17:12:37,426 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 13:13:26] 2026-03-12 17:12:37,427 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 13:13:26] 2026-03-12 17:12:37,427 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 13:13:26] 2026-03-12 17:12:37,427 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 13:13:26] 2026-03-12 17:12:37,427 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 13:13:26] 2026-03-12 17:12:37,427 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 13:13:26] 2026-03-12 17:12:37,428 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 13:13:26] 2026-03-12 17:12:37,428 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 13:13:26] 2026-03-12 17:12:37,428 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 13:13:26] 2026-03-12 17:12:37,428 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 13:13:26] 2026-03-12 17:12:37,428 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 13:13:26] 2026-03-12 17:12:37,559 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 13:13:26] 2026-03-12 17:12:37,559 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 13:13:26] 2026-03-12 17:12:37,559 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 13:13:26] 2026-03-12 17:12:37,560 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 13:13:26] 2026-03-12 17:12:37,560 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 13:13:26] 2026-03-12 17:12:37,560 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 13:13:26] 2026-03-12 17:12:37,560 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 13:13:26] 2026-03-12 17:12:37,560 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 13:13:26] 2026-03-12 17:12:37,560 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 13:13:26] 2026-03-12 17:12:37,561 | INFO     | job 7049312273 has completed (purged errors)
[2026-03-12 13:13:26] 2026-03-12 17:12:37,561 | INFO     | overall cleanup function is called
[2026-03-12 13:13:26] 2026-03-12 17:12:38,610 | INFO     | --- collectZombieJob: --- 10, [3190107]
[2026-03-12 13:13:26] 2026-03-12 17:12:38,610 | INFO     | zombie collector waiting for pid 3190107
[2026-03-12 13:13:26] 2026-03-12 17:12:38,610 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 13:13:26] 2026-03-12 17:12:38,611 | INFO     | collected zombie processes
[2026-03-12 13:13:26] 2026-03-12 17:12:38,611 | INFO     | will attempt to kill all subprocesses of pid=3190107
[2026-03-12 13:13:26] 2026-03-12 17:12:41,550 | INFO     | PID=3158551 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 13:13:26] 2026-03-12 17:12:41,550 | INFO     | .. there are 39 such processes running
[2026-03-12 13:13:26] 2026-03-12 17:12:43,067 | INFO     | process IDs to be killed: [3190107] (in reverse order)
[2026-03-12 13:13:26] 2026-03-12 17:12:43,535 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 13:13:26] 2026-03-12 17:12:43,536 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 13:13:26] 2026-03-12 17:12:43,562 | INFO     | did not find any defunct processes belonging to 3190107
[2026-03-12 13:13:26] 2026-03-12 17:12:43,711 | INFO     | did not find any defunct processes belonging to 3190107
[2026-03-12 13:13:26] 2026-03-12 17:12:43,711 | INFO     | ready for new job
[2026-03-12 13:13:26] 2026-03-12 17:12:43,712 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 13:13:26] 2026-03-12 17:12:43,745 | INFO     | **************************************
[2026-03-12 13:13:26] 2026-03-12 17:12:43,767 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-12 13:13:26] 2026-03-12 17:12:43,767 | INFO     | **************************************
[2026-03-12 13:13:26] 2026-03-12 17:12:43,767 | INFO     | 
[2026-03-12 13:13:26] 2026-03-12 17:12:43,769 | INFO     | architecture information:
[2026-03-12 13:13:26] 2026-03-12 17:12:43,792 | INFO     | executing command: cat /etc/os-release
[2026-03-12 13:13:26] 2026-03-12 17:12:43,863 | INFO     | cat /etc/os-release:
[2026-03-12 13:13:26] NAME="CentOS Linux"
[2026-03-12 13:13:26] VERSION="7 (Core)"
[2026-03-12 13:13:26] ID="centos"
[2026-03-12 13:13:26] ID_LIKE="rhel fedora"
[2026-03-12 13:13:26] VERSION_ID="7"
[2026-03-12 13:13:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 13:13:26] ANSI_COLOR="0;31"
[2026-03-12 13:13:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 13:13:26] HOME_URL="https://www.centos.org/"
[2026-03-12 13:13:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 13:13:26] 
[2026-03-12 13:13:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 13:13:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 13:13:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 13:13:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 13:13:26] 
[2026-03-12 13:13:26] 2026-03-12 17:12:43,864 | INFO     | **************************************
[2026-03-12 13:13:26] 2026-03-12 17:12:44,367 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-12 13:13:26] 2026-03-12 17:12:44,455 | INFO     | sufficient remaining disk space (52844036096 B)
[2026-03-12 13:13:26] 2026-03-12 17:12:44,456 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 13:13:26] 2026-03-12 17:12:44,456 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 13:13:26] 2026-03-12 17:12:44,456 | INFO     | update_server=False
[2026-03-12 13:13:26] 2026-03-12 17:12:44,456 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 13:13:26] 2026-03-12 17:12:44,457 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 13:13:26] 2026-03-12 17:12:44,464 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 13:13:26] 2026-03-12 17:12:44,491 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 13:13:26] 2026-03-12 17:12:44,491 | INFO     | aborting loop
[2026-03-12 13:13:26] 2026-03-12 17:12:45,331 | INFO     | all payload control threads have been joined
[2026-03-12 13:13:26] 2026-03-12 17:12:45,331 | INFO     | all data control threads have been joined
[2026-03-12 13:13:26] 2026-03-12 17:12:45,479 | INFO     | [job] retrieve thread has finished
[2026-03-12 13:13:26] 2026-03-12 17:12:45,489 | INFO     | all job control threads have been joined
[2026-03-12 13:13:26] 2026-03-12 17:12:45,528 | INFO     | [job] job monitor thread has finished
[2026-03-12 13:13:26] 2026-03-12 17:12:45,601 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 13:13:26] 2026-03-12 17:12:45,684 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 13:13:26] 2026-03-12 17:12:45,699 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 13:13:26] 2026-03-12 17:12:45,751 | INFO     | [job] validate thread has finished
[2026-03-12 13:13:26] 2026-03-12 17:12:45,772 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 13:13:26] 2026-03-12 17:12:45,773 | INFO     | [data] copytool_in thread has finished
[2026-03-12 13:13:26] 2026-03-12 17:12:45,859 | INFO     | [payload] validate_post thread has finished
[2026-03-12 13:13:26] 2026-03-12 17:12:46,132 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 13:13:26] 2026-03-12 17:12:46,337 | INFO     | [payload] control thread has finished
[2026-03-12 13:13:26] 2026-03-12 17:12:46,356 | INFO     | [data] control thread has finished
[2026-03-12 13:13:26] 2026-03-12 17:12:46,494 | INFO     | [data] copytool_out thread has finished
[2026-03-12 13:13:26] 2026-03-12 17:12:46,501 | INFO     | [job] control thread has finished
[2026-03-12 13:13:26] 2026-03-12 17:12:46,826 | INFO     | [payload] failed_post thread has finished
[2026-03-12 13:13:26] 2026-03-12 17:12:47,142 | INFO     | [job] queue monitor thread has finished
[2026-03-12 13:13:26] 2026-03-12 17:12:48,473 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 13:13:26] 2026-03-12 17:12:50,159 | INFO     | [monitor] cgroup control has ended
[2026-03-12 13:13:26] 2026-03-12 17:12:50,855 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139672478865216)>', '<ExcThread(monitor, started 139672101566208)>']
[2026-03-12 13:13:26] 2026-03-12 17:12:55,903 | INFO     | all workflow threads have been joined
[2026-03-12 13:13:26] 2026-03-12 17:12:55,903 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 13:13:26] 2026-03-12 17:12:55,904 | INFO     | traces error code: 0
[2026-03-12 13:13:26] 2026-03-12 17:12:55,904 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 13:13:26] 2026-03-12 17:13:21,289 | INFO     | PID=3158551 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 13:13:26] 2026-03-12 17:13:21,349 | INFO     | .. there are 39 such processes running
[2026-03-12 13:13:26] 2026-03-12 17:13:21,350 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 13:13:26] 2026-03-12 17:13:21,350 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 13:13:26] 2026-03-12 17:13:21,350 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 13:13:26] 2026-03-12 17:13:21,350 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 13:13:26] 2026-03-12 17:13:21,351 | INFO     | [monitor] control thread has ended
[2026-03-12 13:13:26] 2026-03-12 17:13:23,677 [wrapper] ==== pilot stdout END ====
[2026-03-12 13:13:26] 2026-03-12 17:13:23,713 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 13:13:26] 2026-03-12 17:13:23,754 [wrapper] pilotpid: 3158551
[2026-03-12 13:13:26] 2026-03-12 17:13:23,804 [wrapper] Pilot exit status: 0
[2026-03-12 13:13:26] 2026-03-12 17:13:24,020 [wrapper] pandaids: 7049312273
[2026-03-12 13:13:26] 2026-03-12 17:13:25,521 [wrapper] cleanup supervisor_pilot  385368 3158552
[2026-03-12 13:13:26] 2026-03-12 17:13:25,579 [wrapper] Test setup, not cleaning
[2026-03-12 13:13:26] 2026-03-12 17:13:25,624 [wrapper] apfmon messages muted
[2026-03-12 13:13:26] 2026-03-12 17:13:25,680 [wrapper] ==== wrapper stdout END ====
[2026-03-12 13:13:26] 2026-03-12 17:13:25,726 [wrapper] ==== wrapper stderr END ====
[2026-03-12 13:13:26]  *** Error codes and diagnostics ***
[2026-03-12 13:13:26]     "exeErrorCode": 0,
[2026-03-12 13:13:26]     "exeErrorDiag": "",
[2026-03-12 13:13:26]     "pilotErrorCode": 0,
[2026-03-12 13:13:26]     "pilotErrorDiag": "",
[2026-03-12 13:13:26]  *** Listing of results directory ***
[2026-03-12 13:13:26] total 435268
[2026-03-12 13:13:26] -rw-r--r--. 1 boincer umatlas    585013 Mar 10 20:16 pilot3.tar.gz
[2026-03-12 13:13:26] -rwx------. 1 boincer umatlas     36322 Mar 10 20:21 runpilot2-wrapper.sh
[2026-03-12 13:13:26] -rw-r--r--. 1 boincer umatlas      5111 Mar 10 20:21 queuedata.json
[2026-03-12 13:13:26] -rw-r--r--. 1 boincer umatlas       100 Mar 11 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 13:13:26] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 11 00:03 run_atlas
[2026-03-12 13:13:26] -rw-r--r--. 1 boincer umatlas       105 Mar 11 00:03 job.xml
[2026-03-12 13:13:26] -rw-r--r--. 2 boincer umatlas 212133236 Mar 11 00:03 EVNT.48967083._000149.pool.root.1
[2026-03-12 13:13:26] -rw-r--r--. 2 boincer umatlas     15845 Mar 11 00:03 start_atlas.sh
[2026-03-12 13:13:26] drwxrwx--x. 2 boincer umatlas      4096 Mar 11 00:03 shared
[2026-03-12 13:13:26] -rw-r--r--. 2 boincer umatlas    597521 Mar 11 00:03 input.tar.gz
[2026-03-12 13:13:26] -rw-r--r--. 1 boincer umatlas         0 Mar 11 00:03 boinc_lockfile
[2026-03-12 13:13:26] -rw-r--r--. 1 boincer umatlas      2561 Mar 11 00:03 pandaJob.out
[2026-03-12 13:13:26] -rw-------. 1 boincer umatlas        57 Mar 11 00:03 setup.sh.local
[2026-03-12 13:13:26] -rw-------. 1 boincer umatlas       433 Mar 11 00:07 workernode_map.json
[2026-03-12 13:13:26] -rw-------. 1 boincer umatlas   1006644 Mar 11 00:07 agis_schedconf.cvmfs.json
[2026-03-12 13:13:26] drwx------. 5 boincer umatlas      4096 Mar 11 00:07 pilot3
[2026-03-12 13:13:26] -rw-------. 1 boincer umatlas 201374780 Mar 12 13:09 HITS.48967085._003721.pool.root.1
[2026-03-12 13:13:26] -rw-r--r--. 1 boincer umatlas       532 Mar 12 13:09 boinc_task_state.xml
[2026-03-12 13:13:26] -rw-r--r--. 1 boincer umatlas      6525 Mar 12 13:11 init_data.xml
[2026-03-12 13:13:26] -rw-------. 1 boincer umatlas      1045 Mar 12 13:11 memory_monitor_summary.json
[2026-03-12 13:13:26] -rw-------. 1 boincer umatlas   1511578 Mar 12 13:12 agis_ddmendpoints.agis.ALL.json
[2026-03-12 13:13:26] -rw-------. 1 boincer umatlas   1655784 Mar 12 13:12 log.48967085._003721.job.log.tgz.1
[2026-03-12 13:13:26] -rw-------. 1 boincer umatlas      6385 Mar 12 13:12 heartbeat.json
[2026-03-12 13:13:26] -rw-r--r--. 1 boincer umatlas        29 Mar 12 13:13 wrapper_checkpoint.txt
[2026-03-12 13:13:26] -rw-r--r--. 1 boincer umatlas      8192 Mar 12 13:13 boinc_mmap_file
[2026-03-12 13:13:26] -rw-------. 1 boincer umatlas        95 Mar 12 13:13 pilot_heartbeat.json
[2026-03-12 13:13:26] -rw-------. 1 boincer umatlas       823 Mar 12 13:13 pilotlog.txt
[2026-03-12 13:13:26] -rw-------. 1 boincer umatlas  12487303 Mar 12 13:13 log.48967085._003721.job.log.1
[2026-03-12 13:13:26] -rw-------. 1 boincer umatlas       357 Mar 12 13:13 output.list
[2026-03-12 13:13:26] -rw-r--r--. 1 boincer umatlas       620 Mar 12 13:13 runtime_log
[2026-03-12 13:13:26] -rw-------. 1 boincer umatlas  14161920 Mar 12 13:13 result.tar.gz
[2026-03-12 13:13:26] -rw-r--r--. 1 boincer umatlas      9343 Mar 12 13:13 runtime_log.err
[2026-03-12 13:13:26] -rw-------. 1 boincer umatlas       661 Mar 12 13:13 f1ANDm4UMK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmCnhLDmISSYnm.diag
[2026-03-12 13:13:26] -rw-r--r--. 1 boincer umatlas      2143 Mar 12 13:13 stderr.txt
[2026-03-12 13:13:27] HITS file was successfully produced:
[2026-03-12 13:13:27] -rw-------. 1 boincer umatlas 201374780 Mar 12 13:09 shared/HITS.pool.root.1
[2026-03-12 13:13:27]  *** Contents of shared directory: ***
[2026-03-12 13:13:27] total 418260
[2026-03-12 13:13:27] -rw-r--r--. 2 boincer umatlas 212133236 Mar 11 00:03 ATLAS.root_0
[2026-03-12 13:13:27] -rw-r--r--. 2 boincer umatlas     15845 Mar 11 00:03 start_atlas.sh
[2026-03-12 13:13:27] -rw-r--r--. 2 boincer umatlas    597521 Mar 11 00:03 input.tar.gz
[2026-03-12 13:13:27] -rw-------. 1 boincer umatlas 201374780 Mar 12 13:09 HITS.pool.root.1
[2026-03-12 13:13:27] -rw-------. 1 boincer umatlas  14161920 Mar 12 13:13 result.tar.gz
13:13:28 (3138394): run_atlas exited; CPU time 102548.331155
13:13:28 (3138394): called boinc_finish(0)

</stderr_txt>
]]>

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