Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:51:14 (1102079): wrapper (7.7.26015): starting
19:51:14 (1102079): wrapper: running run_atlas (--nthreads 4)
[2026-03-11 19:51:14] Arguments: --nthreads 4
[2026-03-11 19:51:14] Threads: 4
[2026-03-11 19:51:14] Checking for CVMFS
[2026-03-11 19:51:14] No cvmfs_config command found, will try listing directly
[2026-03-11 19:51:14] CVMFS is ok
[2026-03-11 19:51:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 19:51:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-11 19:51:14] Further information can be found at the LHC@home message board.
[2026-03-11 19:51:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 19:51:14] Checking for apptainer binary...
[2026-03-11 19:51:14] which: no apptainer in ((null))
[2026-03-11 19:51:14] apptainer is not installed, using version from CVMFS
[2026-03-11 19:51:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 19:51:14] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot80/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-03-11 19:51:14] apptainer works
[2026-03-11 19:51:14] Set ATHENA_PROC_NUMBER=4
[2026-03-11 19:51:14] Set ATHENA_CORE_NUMBER=4
[2026-03-11 19:51:14] Starting ATLAS job with PandaID=7049157004
[2026-03-11 19:51:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot80/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 21:39:38]  *** The last 200 lines of the pilot log: ***
[2026-03-11 21:39:38] 2026-03-11 20:34:43,349 | INFO     | total number of processed events: 400 (read)
[2026-03-11 21:39:38] 2026-03-11 20:34:43,368 | INFO     | using path: /var/lib/boinc/var/slot80/slots/2/PanDA_Pilot-7049157004/memory_monitor_summary.json (trf name=prmon)
[2026-03-11 21:39:38] 2026-03-11 20:34:43,369 | INFO     | extracted standard info from prmon json
[2026-03-11 21:39:38] 2026-03-11 20:34:43,369 | INFO     | extracted standard memory fields from prmon json
[2026-03-11 21:39:38] 2026-03-11 20:34:43,369 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-11 21:39:38] 2026-03-11 20:34:43,369 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-11 21:39:38] 2026-03-11 20:34:43,369 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-11 21:39:38] 2026-03-11 20:34:43,370 | INFO     | fitting pss+swap vs Time
[2026-03-11 21:39:38] 2026-03-11 20:34:43,371 | INFO     | sum of square deviations: 329031285.5
[2026-03-11 21:39:38] 2026-03-11 20:34:43,371 | INFO     | sum of deviations: 3650084236.499999
[2026-03-11 21:39:38] 2026-03-11 20:34:43,371 | INFO     | mean x: 1773258188.5
[2026-03-11 21:39:38] 2026-03-11 20:34:43,371 | INFO     | mean y: 2273809.3235294116
[2026-03-11 21:39:38] 2026-03-11 20:34:43,371 | INFO     | intersect: -19669234786.743984
[2026-03-11 21:39:38] 2026-03-11 20:34:43,371 | INFO     | chi2: 1.926267906831029
[2026-03-11 21:39:38] 2026-03-11 20:34:43,371 | INFO     | sum of square deviations: 282974608.0
[2026-03-11 21:39:38] 2026-03-11 20:34:43,371 | INFO     | sum of deviations: 9604090161.0
[2026-03-11 21:39:38] 2026-03-11 20:34:43,371 | INFO     | mean x: 1773258036.0
[2026-03-11 21:39:38] 2026-03-11 20:34:43,371 | INFO     | mean y: 2292684.907216495
[2026-03-11 21:39:38] 2026-03-11 20:34:43,372 | INFO     | intersect: -60181658719.17701
[2026-03-11 21:39:38] 2026-03-11 20:34:43,372 | INFO     | chi2: 1.110081300655332
[2026-03-11 21:39:38] 2026-03-11 20:34:43,372 | INFO     | current chi2=1.110081300655332 (change=42.37139617398466 %)
[2026-03-11 21:39:38] 2026-03-11 20:34:43,372 | INFO     | sum of square deviations: 241429643.0
[2026-03-11 21:39:38] 2026-03-11 20:34:43,372 | INFO     | sum of deviations: 9038172604.0
[2026-03-11 21:39:38] 2026-03-11 20:34:43,372 | INFO     | mean x: 1773257883.5
[2026-03-11 21:39:38] 2026-03-11 20:34:43,372 | INFO     | mean y: 2290605.6086956523
[2026-03-11 21:39:38] 2026-03-11 20:34:43,372 | INFO     | intersect: -66381483248.03
[2026-03-11 21:39:38] 2026-03-11 20:34:43,372 | INFO     | chi2: 1.112270807271793
[2026-03-11 21:39:38] 2026-03-11 20:34:43,372 | INFO     | current chi2=1.112270807271793 (change=-0.1972384018331301 %)
[2026-03-11 21:39:38] 2026-03-11 20:34:43,372 | INFO     | right removable region: 91
[2026-03-11 21:39:38] 2026-03-11 20:34:43,372 | INFO     | sum of square deviations: 282974608.0
[2026-03-11 21:39:38] 2026-03-11 20:34:43,373 | INFO     | sum of deviations: -5583700941.0
[2026-03-11 21:39:38] 2026-03-11 20:34:43,373 | INFO     | mean x: 1773258341.0
[2026-03-11 21:39:38] 2026-03-11 20:34:43,373 | INFO     | mean y: 2303359.8969072164
[2026-03-11 21:39:38] 2026-03-11 20:34:43,373 | INFO     | intersect: 34992525052.43053
[2026-03-11 21:39:38] 2026-03-11 20:34:43,373 | INFO     | chi2: 0.8508196641126476
[2026-03-11 21:39:38] 2026-03-11 20:34:43,373 | INFO     | current chi2=0.8508196641126476 (change=55.83066814873322 %)
[2026-03-11 21:39:38] 2026-03-11 20:34:43,373 | INFO     | sum of square deviations: 241429643.0
[2026-03-11 21:39:38] 2026-03-11 20:34:43,373 | INFO     | sum of deviations: -5326982502.0
[2026-03-11 21:39:38] 2026-03-11 20:34:43,373 | INFO     | mean x: 1773258493.5
[2026-03-11 21:39:38] 2026-03-11 20:34:43,373 | INFO     | mean y: 2302409.3695652173
[2026-03-11 21:39:38] 2026-03-11 20:34:43,373 | INFO     | intersect: 39128057014.39701
[2026-03-11 21:39:38] 2026-03-11 20:34:43,373 | INFO     | chi2: 0.8522413287968633
[2026-03-11 21:39:38] 2026-03-11 20:34:43,373 | INFO     | current chi2=0.8522413287968633 (change=-0.16709353864057452 %)
[2026-03-11 21:39:38] 2026-03-11 20:34:43,373 | INFO     | left removable region: 20
[2026-03-11 21:39:38] 2026-03-11 20:34:43,373 | INFO     | sum of square deviations: 110960220.0
[2026-03-11 21:39:38] 2026-03-11 20:34:43,374 | INFO     | sum of deviations: 343931175.9999999
[2026-03-11 21:39:38] 2026-03-11 20:34:43,374 | INFO     | mean x: 1773258463.0
[2026-03-11 21:39:38] 2026-03-11 20:34:43,374 | INFO     | mean y: 2324913.408450704
[2026-03-11 21:39:38] 2026-03-11 20:34:43,374 | INFO     | intersect: -5494049089.198449
[2026-03-11 21:39:38] 2026-03-11 20:34:43,374 | INFO     | chi2: 6.500043821015856e-05
[2026-03-11 21:39:38] 2026-03-11 20:34:43,374 | INFO     | current memory leak: 3.10 B/s (using 71 data points, chi2=0.00)
[2026-03-11 21:39:38] 2026-03-11 20:34:43,374 | INFO     | could have reported an average CPU frequency of 3579 MHz (7 samples)
[2026-03-11 21:39:38] 2026-03-11 20:34:43,374 | INFO     | ..............................
[2026-03-11 21:39:38] 2026-03-11 20:34:43,374 | INFO     | . Timing measurements:
[2026-03-11 21:39:38] 2026-03-11 20:34:43,374 | INFO     | . get job = 0 s
[2026-03-11 21:39:38] 2026-03-11 20:34:43,374 | INFO     | . initial setup = 5 s
[2026-03-11 21:39:38] 2026-03-11 20:34:43,374 | INFO     | . payload setup = 5 s
[2026-03-11 21:39:38] 2026-03-11 20:34:43,374 | INFO     | . stage-in = 0 s
[2026-03-11 21:39:38] 2026-03-11 20:34:43,374 | INFO     | . payload execution = 6173 s
[2026-03-11 21:39:38] 2026-03-11 20:34:43,374 | INFO     | . stage-out = 0 s
[2026-03-11 21:39:38] 2026-03-11 20:34:43,374 | INFO     | . log creation = 0 s
[2026-03-11 21:39:38] 2026-03-11 20:34:43,374 | INFO     | ..............................
[2026-03-11 21:39:38] 2026-03-11 20:34:43,594 | INFO     | 
[2026-03-11 21:39:38] 2026-03-11 20:34:43,595 | INFO     | job summary report
[2026-03-11 21:39:38] 2026-03-11 20:34:43,595 | INFO     | --------------------------------------------------
[2026-03-11 21:39:38] 2026-03-11 20:34:43,595 | INFO     | PanDA job id: 7049157004
[2026-03-11 21:39:38] 2026-03-11 20:34:43,595 | INFO     | task id: 48967085
[2026-03-11 21:39:38] 2026-03-11 20:34:43,595 | INFO     | errors: (none)
[2026-03-11 21:39:38] 2026-03-11 20:34:43,595 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-11 21:39:38] 2026-03-11 20:34:43,595 | INFO     | pilot state: finished 
[2026-03-11 21:39:38] 2026-03-11 20:34:43,595 | INFO     | transexitcode: 0
[2026-03-11 21:39:38] 2026-03-11 20:34:43,595 | INFO     | exeerrorcode: 0
[2026-03-11 21:39:38] 2026-03-11 20:34:43,595 | INFO     | exeerrordiag: 
[2026-03-11 21:39:38] 2026-03-11 20:34:43,595 | INFO     | exitcode: 0
[2026-03-11 21:39:38] 2026-03-11 20:34:43,595 | INFO     | exitmsg: OK
[2026-03-11 21:39:38] 2026-03-11 20:34:43,595 | INFO     | cpuconsumptiontime: 23797 s
[2026-03-11 21:39:38] 2026-03-11 20:34:43,595 | INFO     | nevents: 400
[2026-03-11 21:39:38] 2026-03-11 20:34:43,595 | INFO     | neventsw: 0
[2026-03-11 21:39:38] 2026-03-11 20:34:43,595 | INFO     | pid: 1113156
[2026-03-11 21:39:38] 2026-03-11 20:34:43,595 | INFO     | pgrp: 1113156
[2026-03-11 21:39:38] 2026-03-11 20:34:43,595 | INFO     | corecount: 4
[2026-03-11 21:39:38] 2026-03-11 20:34:43,595 | INFO     | event service: False
[2026-03-11 21:39:38] 2026-03-11 20:34:43,595 | INFO     | sizes: {0: 2280248, 11: 2280248, 6182: 2307146, 6183: 2316166, 6184: 2316222, 6185: 2316416}
[2026-03-11 21:39:38] 2026-03-11 20:34:43,595 | INFO     | --------------------------------------------------
[2026-03-11 21:39:38] 2026-03-11 20:34:43,595 | INFO     | 
[2026-03-11 21:39:38] 2026-03-11 20:34:43,596 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot80/slots/2
[2026-03-11 21:39:38] 2026-03-11 20:34:43,617 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-11 21:39:38] 2026-03-11 20:34:43,617 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-11 21:39:38] 2026-03-11 20:34:43,617 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-11 21:39:38] 2026-03-11 20:34:43,617 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-11 21:39:38] 2026-03-11 20:34:43,617 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-11 21:39:38] 2026-03-11 20:34:43,617 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-11 21:39:38] 2026-03-11 20:34:43,617 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-11 21:39:38] 2026-03-11 20:34:43,617 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-11 21:39:38] 2026-03-11 20:34:43,618 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-11 21:39:38] 2026-03-11 20:34:43,618 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-11 21:39:38] 2026-03-11 20:34:43,618 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-11 21:39:38] 2026-03-11 20:34:43,618 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-11 21:39:38] 2026-03-11 20:34:43,618 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-11 21:39:38] 2026-03-11 20:34:43,618 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-11 21:39:38] 2026-03-11 20:34:43,618 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-11 21:39:38] 2026-03-11 20:34:43,618 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-11 21:39:38] 2026-03-11 20:34:43,618 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-11 21:39:38] 2026-03-11 20:34:43,618 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-11 21:39:38] 2026-03-11 20:34:43,618 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-11 21:39:38] 2026-03-11 20:34:43,618 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-11 21:39:38] 2026-03-11 20:34:43,618 | INFO     | job 7049157004 has completed (purged errors)
[2026-03-11 21:39:38] 2026-03-11 20:34:43,618 | INFO     | overall cleanup function is called
[2026-03-11 21:39:38] 2026-03-11 20:34:44,624 | INFO     | --- collectZombieJob: --- 10, [1113156]
[2026-03-11 21:39:38] 2026-03-11 20:34:44,625 | INFO     | zombie collector waiting for pid 1113156
[2026-03-11 21:39:38] 2026-03-11 20:34:44,625 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-11 21:39:38] 2026-03-11 20:34:44,625 | INFO     | collected zombie processes
[2026-03-11 21:39:38] 2026-03-11 20:34:44,625 | INFO     | will attempt to kill all subprocesses of pid=1113156
[2026-03-11 21:39:38] 2026-03-11 20:34:45,119 | INFO     | process IDs to be killed: [1113156] (in reverse order)
[2026-03-11 21:39:38] 2026-03-11 20:34:45,356 | WARNING  | found no corresponding commands to process id(s)
[2026-03-11 21:39:38] 2026-03-11 20:34:45,356 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-11 21:39:38] 2026-03-11 20:34:45,387 | INFO     | did not find any defunct processes belonging to 1113156
[2026-03-11 21:39:38] 2026-03-11 20:34:45,418 | INFO     | did not find any defunct processes belonging to 1113156
[2026-03-11 21:39:38] 2026-03-11 20:34:45,418 | INFO     | ready for new job
[2026-03-11 21:39:38] 2026-03-11 20:34:45,418 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-11 21:39:38] 2026-03-11 20:34:45,419 | INFO     | **************************************
[2026-03-11 21:39:38] 2026-03-11 20:34:45,420 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-11 21:39:38] 2026-03-11 20:34:45,420 | INFO     | **************************************
[2026-03-11 21:39:38] 2026-03-11 20:34:45,420 | INFO     | 
[2026-03-11 21:39:38] 2026-03-11 20:34:45,426 | INFO     | architecture information:
[2026-03-11 21:39:38] 2026-03-11 20:34:45,426 | INFO     | executing command: cat /etc/os-release
[2026-03-11 21:39:38] 2026-03-11 20:34:45,444 | INFO     | cat /etc/os-release:
[2026-03-11 21:39:38] NAME="CentOS Linux"
[2026-03-11 21:39:38] VERSION="7 (Core)"
[2026-03-11 21:39:38] ID="centos"
[2026-03-11 21:39:38] ID_LIKE="rhel fedora"
[2026-03-11 21:39:38] VERSION_ID="7"
[2026-03-11 21:39:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-11 21:39:38] ANSI_COLOR="0;31"
[2026-03-11 21:39:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-11 21:39:38] HOME_URL="https://www.centos.org/"
[2026-03-11 21:39:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-11 21:39:38] 
[2026-03-11 21:39:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-11 21:39:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-11 21:39:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-11 21:39:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-11 21:39:38] 
[2026-03-11 21:39:38] 2026-03-11 20:34:45,444 | INFO     | **************************************
[2026-03-11 21:39:38] 2026-03-11 20:34:45,947 | INFO     | executing command: df -mP /var/lib/boinc/var/slot80/slots/2
[2026-03-11 21:39:38] 2026-03-11 20:34:45,964 | INFO     | sufficient remaining disk space (30454841344 B)
[2026-03-11 21:39:38] 2026-03-11 20:34:45,964 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-11 21:39:38] 2026-03-11 20:34:45,964 | INFO     | current server update state: UPDATING_FINAL
[2026-03-11 21:39:38] 2026-03-11 20:34:45,964 | INFO     | update_server=False
[2026-03-11 21:39:38] 2026-03-11 20:34:45,964 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-11 21:39:38] 2026-03-11 20:34:46,041 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-11 21:39:38] 2026-03-11 20:34:46,042 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-11 21:39:38] 2026-03-11 20:34:46,042 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-11 21:39:38] 2026-03-11 20:34:46,042 | INFO     | will abort loop
[2026-03-11 21:39:38] 2026-03-11 20:34:46,698 | INFO     | all data control threads have been joined
[2026-03-11 21:39:38] 2026-03-11 20:34:46,908 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 21:39:38] 2026-03-11 20:34:46,970 | INFO     | [job] retrieve thread has finished
[2026-03-11 21:39:38] 2026-03-11 20:34:47,047 | INFO     | [job] job monitor thread has finished
[2026-03-11 21:39:38] 2026-03-11 20:34:47,082 | INFO     | [payload] failed_post thread has finished
[2026-03-11 21:39:38] 2026-03-11 20:34:47,343 | INFO     | all payload control threads have been joined
[2026-03-11 21:39:38] 2026-03-11 20:34:47,400 | INFO     | all job control threads have been joined
[2026-03-11 21:39:38] 2026-03-11 20:34:47,556 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 21:39:38] 2026-03-11 20:34:47,588 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 21:39:38] 2026-03-11 20:34:47,632 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 21:39:38] 2026-03-11 20:34:47,693 | INFO     | [job] validate thread has finished
[2026-03-11 21:39:38] 2026-03-11 20:34:47,704 | INFO     | [data] control thread has finished
[2026-03-11 21:39:38] 2026-03-11 20:34:48,011 | INFO     | [payload] validate_post thread has finished
[2026-03-11 21:39:38] 2026-03-11 20:34:48,224 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 21:39:38] 2026-03-11 20:34:48,281 | INFO     | [data] copytool_in thread has finished
[2026-03-11 21:39:38] 2026-03-11 20:34:48,347 | INFO     | [payload] control thread has finished
[2026-03-11 21:39:38] 2026-03-11 20:34:48,405 | INFO     | [job] control thread has finished
[2026-03-11 21:39:38] 2026-03-11 20:34:48,434 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 21:39:38] 2026-03-11 20:34:48,913 | INFO     | [data] copytool_out thread has finished
[2026-03-11 21:39:38] 2026-03-11 20:34:49,442 | INFO     | [job] queue monitor thread has finished
[2026-03-11 21:39:38] 2026-03-11 20:34:52,230 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 21:39:38] 2026-03-11 20:34:56,315 | INFO     | job.realtimelogging is not enabled
[2026-03-11 21:39:38] 2026-03-11 20:34:57,320 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 21:39:38] 2026-03-11 20:35:16,407 | INFO     | PID=1106658 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-11 21:39:38] 2026-03-11 20:35:16,407 | INFO     | .. there are 45 such processes running
[2026-03-11 21:39:38] 2026-03-11 20:35:16,408 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 21:39:38] 2026-03-11 20:35:16,408 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 21:39:38] 2026-03-11 20:35:16,408 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 21:39:38] 2026-03-11 20:35:36,780 | INFO     | [monitor] cgroup control has ended
[2026-03-11 21:39:38] 2026-03-11 20:35:38,639 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22649293113152)>', '<ExcThread(monitor, started 22649047877376)>']
[2026-03-11 21:39:38] 2026-03-11 20:35:39,521 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 21:39:38] 2026-03-11 20:35:39,522 | INFO     | [monitor] control thread has ended
[2026-03-11 21:39:38] 2026-03-11 20:35:43,664 | INFO     | all workflow threads have been joined
[2026-03-11 21:39:38] 2026-03-11 20:35:43,665 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 21:39:38] 2026-03-11 20:35:43,665 | INFO     | traces error code: 0
[2026-03-11 21:39:38] 2026-03-11 20:35:43,665 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 21:39:38] 2026-03-11 20:35:43,809 [wrapper] ==== pilot stdout END ====
[2026-03-11 21:39:38] 2026-03-11 20:35:43,813 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 21:39:38] 2026-03-11 20:35:43,816 [wrapper] pilotpid: 1106658
[2026-03-11 21:39:38] 2026-03-11 20:35:43,819 [wrapper] Pilot exit status: 0
[2026-03-11 21:39:38] 2026-03-11 20:35:43,828 [wrapper] pandaids: 7049157004
[2026-03-11 21:39:38] 2026-03-11 20:35:43,970 [wrapper] cleanup supervisor_pilot 1782088 1106659
[2026-03-11 21:39:38] 2026-03-11 20:35:43,972 [wrapper] Test setup, not cleaning
[2026-03-11 21:39:38] 2026-03-11 20:35:43,975 [wrapper] apfmon messages muted
[2026-03-11 21:39:38] 2026-03-11 20:35:43,978 [wrapper] ==== wrapper stdout END ====
[2026-03-11 21:39:38] 2026-03-11 20:35:43,980 [wrapper] ==== wrapper stderr END ====
[2026-03-11 21:39:38]  *** Error codes and diagnostics ***
[2026-03-11 21:39:38]     "exeErrorCode": 0,
[2026-03-11 21:39:38]     "exeErrorDiag": "",
[2026-03-11 21:39:38]     "pilotErrorCode": 0,
[2026-03-11 21:39:38]     "pilotErrorDiag": "",
[2026-03-11 21:39:38]  *** Listing of results directory ***
[2026-03-11 21:39:38] total 405516
[2026-03-11 21:39:38] -rw-r--r--. 1 boinc boinc    585013 Mar 10 19:10 pilot3.tar.gz
[2026-03-11 21:39:38] -rwx------. 1 boinc boinc     36322 Mar 10 19:14 runpilot2-wrapper.sh
[2026-03-11 21:39:38] -rw-r--r--. 1 boinc boinc      5111 Mar 10 19:14 queuedata.json
[2026-03-11 21:39:38] -rw-r--r--. 1 boinc boinc       100 Mar 11 19:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 21:39:38] -rwxr-xr-x. 1 boinc boinc      7986 Mar 11 19:51 run_atlas
[2026-03-11 21:39:38] -rw-r--r--. 1 boinc boinc       105 Mar 11 19:51 job.xml
[2026-03-11 21:39:38] -rw-r--r--. 2 boinc boinc     15845 Mar 11 19:51 start_atlas.sh
[2026-03-11 21:39:38] drwxrwx--x. 2 boinc boinc      4096 Mar 11 19:51 shared
[2026-03-11 21:39:38] -rw-r--r--. 2 boinc boinc    597518 Mar 11 19:51 input.tar.gz
[2026-03-11 21:39:38] -rw-r--r--. 1 boinc boinc      6707 Mar 11 19:51 init_data.xml
[2026-03-11 21:39:38] -rw-r--r--. 2 boinc boinc 214713972 Mar 11 19:51 EVNT.48967083._000078.pool.root.1
[2026-03-11 21:39:38] -rw-r--r--. 1 boinc boinc         0 Mar 11 19:51 boinc_lockfile
[2026-03-11 21:39:38] -rw-r--r--. 1 boinc boinc      2561 Mar 11 19:51 pandaJob.out
[2026-03-11 21:39:38] -rw-------. 1 boinc boinc   1006235 Mar 11 19:51 agis_schedconf.cvmfs.json
[2026-03-11 21:39:38] -rw-------. 1 boinc boinc   1511578 Mar 11 19:51 agis_ddmendpoints.agis.ALL.json
[2026-03-11 21:39:38] -rw-------. 1 boinc boinc       443 Mar 11 19:51 workernode_map.json
[2026-03-11 21:39:38] drwx------. 5 boinc boinc      4096 Mar 11 19:51 pilot3
[2026-03-11 21:39:38] -rw-------. 1 boinc boinc 194254235 Mar 11 21:34 HITS.48967085._001933.pool.root.1
[2026-03-11 21:39:38] -rw-r--r--. 1 boinc boinc       528 Mar 11 21:34 boinc_task_state.xml
[2026-03-11 21:39:38] -rw-------. 1 boinc boinc      1030 Mar 11 21:34 memory_monitor_summary.json
[2026-03-11 21:39:38] -rw-------. 1 boinc boinc    282278 Mar 11 21:34 log.48967085._001933.job.log.tgz.1
[2026-03-11 21:39:38] -rw-------. 1 boinc boinc      6346 Mar 11 21:34 heartbeat.json
[2026-03-11 21:39:38] -rw-------. 1 boinc boinc        95 Mar 11 21:35 pilot_heartbeat.json
[2026-03-11 21:39:38] -rw-------. 1 boinc boinc      5087 Mar 11 21:35 pilotlog.txt
[2026-03-11 21:39:38] -rw-------. 1 boinc boinc    892675 Mar 11 21:35 log.48967085._001933.job.log.1
[2026-03-11 21:39:38] -rw-------. 1 boinc boinc       357 Mar 11 21:35 output.list
[2026-03-11 21:39:38] -rw-r--r--. 1 boinc boinc       620 Mar 11 21:35 runtime_log
[2026-03-11 21:39:38] -rw-------. 1 boinc boinc   1187840 Mar 11 21:35 result.tar.gz
[2026-03-11 21:39:38] -rw-r--r--. 1 boinc boinc      9204 Mar 11 21:35 runtime_log.err
[2026-03-11 21:39:38] -rw-------. 1 boinc boinc       663 Mar 11 21:35 YFJODmXmGK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmT7dLDmQlMKbn.diag
[2026-03-11 21:39:38] -rw-r--r--. 1 boinc boinc        26 Mar 11 21:39 wrapper_checkpoint.txt
[2026-03-11 21:39:38] -rw-r--r--. 1 boinc boinc      8192 Mar 11 21:39 boinc_mmap_file
[2026-03-11 21:39:38] -rw-r--r--. 1 boinc boinc     20786 Mar 11 21:39 stderr.txt
[2026-03-11 21:39:38] HITS file was successfully produced:
[2026-03-11 21:39:38] -rw-------. 1 boinc boinc 194254235 Mar 11 21:34 shared/HITS.pool.root.1
[2026-03-11 21:39:38]  *** Contents of shared directory: ***
[2026-03-11 21:39:38] total 401156
[2026-03-11 21:39:38] -rw-r--r--. 2 boinc boinc     15845 Mar 11 19:51 start_atlas.sh
[2026-03-11 21:39:38] -rw-r--r--. 2 boinc boinc    597518 Mar 11 19:51 input.tar.gz
[2026-03-11 21:39:38] -rw-r--r--. 2 boinc boinc 214713972 Mar 11 19:51 ATLAS.root_0
[2026-03-11 21:39:38] -rw-------. 1 boinc boinc 194254235 Mar 11 21:34 HITS.pool.root.1
[2026-03-11 21:39:38] -rw-------. 1 boinc boinc   1187840 Mar 11 21:35 result.tar.gz
21:39:39 (1102079): run_atlas exited; CPU time 24103.943124
21:39:39 (1102079): called boinc_finish(0)

</stderr_txt>
]]>

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