Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:05:36 (1519237): wrapper (7.7.26015): starting
22:05:36 (1519237): wrapper: running run_atlas (--nthreads 8)
[2026-03-10 22:05:36] Arguments: --nthreads 8
[2026-03-10 22:05:36] Threads: 8
[2026-03-10 22:05:36] Checking for CVMFS
[2026-03-10 22:05:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-10 22:05:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-10 22:05:38] Running cvmfs_config stat atlas.cern.ch
[2026-03-10 22:05:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-10 22:05:41] 2.13.3.0 6596 158920 360324 157137 1 334 22786147 32935937 23496 16776704 0 640962160 99.672 528290581 32294 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-10 22:05:41] CVMFS is ok
[2026-03-10 22:05:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 22:05:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 22:05:41] Further information can be found at the LHC@home message board.
[2026-03-10 22:05:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 22:05:41] Checking for apptainer binary...
[2026-03-10 22:05:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-10 22:05:41] Running /usr/bin/apptainer --version
[2026-03-10 22:05:41] apptainer version 1.4.5-2.el9
[2026-03-10 22:05:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 22:05:43] c-6-7.aglt2.org
[2026-03-10 22:05:43] apptainer works
[2026-03-10 22:05:43] Set ATHENA_PROC_NUMBER=8
[2026-03-10 22:05:43] Set ATHENA_CORE_NUMBER=8
[2026-03-10 22:05:43] Starting ATLAS job with PandaID=7049258732
[2026-03-10 22:05:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 00:02:05]  *** The last 200 lines of the pilot log: ***
[2026-03-12 00:02:05] 2026-03-11 10:05:32,964 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7049258732/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 00:02:05] 2026-03-11 10:05:32,965 | INFO     | extracted standard info from prmon json
[2026-03-12 00:02:05] 2026-03-11 10:05:32,965 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 00:02:05] 2026-03-11 10:05:32,965 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 00:02:05] 2026-03-11 10:05:33,021 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 00:02:05] 2026-03-11 10:05:33,021 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 00:02:05] 2026-03-11 10:05:33,205 | INFO     | fitting pss+swap vs Time
[2026-03-12 00:02:05] 2026-03-11 10:05:33,206 | INFO     | sum of square deviations: 32000001712.682316
[2026-03-12 00:02:05] 2026-03-11 10:05:33,331 | INFO     | sum of deviations: 74492178820.27304
[2026-03-12 00:02:05] 2026-03-11 10:05:33,332 | INFO     | mean x: 1773209236.381663
[2026-03-12 00:02:05] 2026-03-11 10:05:33,332 | INFO     | mean y: 2501406.752665245
[2026-03-12 00:02:05] 2026-03-11 10:05:33,332 | INFO     | intersect: -4125317732.392954
[2026-03-12 00:02:05] 2026-03-11 10:05:33,333 | INFO     | chi2: 4.270860593976478
[2026-03-12 00:02:05] 2026-03-11 10:05:33,334 | INFO     | sum of square deviations: 30987578145.71542
[2026-03-12 00:02:05] 2026-03-11 10:05:33,401 | INFO     | sum of deviations: 133078731501.19403
[2026-03-12 00:02:05] 2026-03-11 10:05:33,402 | INFO     | mean x: 1773209083.8663793
[2026-03-12 00:02:05] 2026-03-11 10:05:33,402 | INFO     | mean y: 2510176.4547413792
[2026-03-12 00:02:05] 2026-03-11 10:05:33,402 | INFO     | intersect: -7612683707.290576
[2026-03-12 00:02:05] 2026-03-11 10:05:33,467 | INFO     | chi2: 2.8902282229763854
[2026-03-12 00:02:05] 2026-03-11 10:05:33,468 | INFO     | current chi2=2.8902282229763854 (change=32.32679551627848 %)
[2026-03-12 00:02:05] 2026-03-11 10:05:33,468 | INFO     | sum of square deviations: 29996532964.33109
[2026-03-12 00:02:05] 2026-03-11 10:05:33,686 | INFO     | sum of deviations: 131367326371.95436
[2026-03-12 00:02:05] 2026-03-11 10:05:33,687 | INFO     | mean x: 1773208931.335512
[2026-03-12 00:02:05] 2026-03-11 10:05:33,687 | INFO     | mean y: 2509913.045751634
[2026-03-12 00:02:05] 2026-03-11 10:05:33,687 | INFO     | intersect: -7763111423.440296
[2026-03-12 00:02:05] 2026-03-11 10:05:33,688 | INFO     | chi2: 2.8908719753111867
[2026-03-12 00:02:05] 2026-03-11 10:05:33,688 | INFO     | current chi2=2.8908719753111867 (change=-0.02227340836559795 %)
[2026-03-12 00:02:05] 2026-03-11 10:05:33,688 | INFO     | right removable region: 458
[2026-03-12 00:02:05] 2026-03-11 10:05:33,689 | INFO     | sum of square deviations: 30987322909.721844
[2026-03-12 00:02:05] 2026-03-11 10:05:33,694 | INFO     | sum of deviations: -47325304779.687485
[2026-03-12 00:02:05] 2026-03-11 10:05:33,694 | INFO     | mean x: 1773209388.9159484
[2026-03-12 00:02:05] 2026-03-11 10:05:33,695 | INFO     | mean y: 2519726.1875
[2026-03-12 00:02:05] 2026-03-11 10:05:33,695 | INFO     | intersect: 2710648950.9396853
[2026-03-12 00:02:05] 2026-03-11 10:05:33,695 | INFO     | chi2: 1.7302003241129194
[2026-03-12 00:02:05] 2026-03-11 10:05:33,696 | INFO     | current chi2=1.7302003241129194 (change=59.48825099669247 %)
[2026-03-12 00:02:05] 2026-03-11 10:05:33,696 | INFO     | sum of square deviations: 29996225783.647026
[2026-03-12 00:02:05] 2026-03-11 10:05:33,702 | INFO     | sum of deviations: -76710853334.7059
[2026-03-12 00:02:05] 2026-03-11 10:05:33,702 | INFO     | mean x: 1773209541.4509804
[2026-03-12 00:02:05] 2026-03-11 10:05:33,702 | INFO     | mean y: 2524233.0130718956
[2026-03-12 00:02:05] 2026-03-11 10:05:33,702 | INFO     | intersect: 4537241968.739124
[2026-03-12 00:02:05] 2026-03-11 10:05:33,703 | INFO     | chi2: 1.5298745591309837
[2026-03-12 00:02:05] 2026-03-11 10:05:33,703 | INFO     | current chi2=1.5298745591309837 (change=11.578183299939184 %)
[2026-03-12 00:02:05] 2026-03-11 10:05:33,703 | INFO     | left removable region: 20
[2026-03-12 00:02:05] 2026-03-11 10:05:33,704 | INFO     | sum of square deviations: 26064575201.57311
[2026-03-12 00:02:05] 2026-03-11 10:05:33,709 | INFO     | sum of deviations: -38655160074.01823
[2026-03-12 00:02:05] 2026-03-11 10:05:33,709 | INFO     | mean x: 1773209510.9429224
[2026-03-12 00:02:05] 2026-03-11 10:05:33,709 | INFO     | mean y: 2536886.6392694064
[2026-03-12 00:02:05] 2026-03-11 10:05:33,709 | INFO     | intersect: 2632301498.5763683
[2026-03-12 00:02:05] 2026-03-11 10:05:33,710 | INFO     | chi2: 0.05304747258212937
[2026-03-12 00:02:05] 2026-03-11 10:05:33,710 | INFO     | current memory leak: -1.48 B/s (using 438 data points, chi2=0.05)
[2026-03-12 00:02:05] 2026-03-11 10:05:33,711 | INFO     | could have reported an average CPU frequency of 2600 MHz (19 samples)
[2026-03-12 00:02:05] 2026-03-11 10:05:33,711 | INFO     | ..............................
[2026-03-12 00:02:05] 2026-03-11 10:05:33,711 | INFO     | . Timing measurements:
[2026-03-12 00:02:05] 2026-03-11 10:05:33,711 | INFO     | . get job = 1 s
[2026-03-12 00:02:05] 2026-03-11 10:05:33,711 | INFO     | . initial setup = 54 s
[2026-03-12 00:02:05] 2026-03-11 10:05:33,711 | INFO     | . payload setup = 47 s
[2026-03-12 00:02:05] 2026-03-11 10:05:33,711 | INFO     | . stage-in = 0 s
[2026-03-12 00:02:05] 2026-03-11 10:05:33,712 | INFO     | . payload execution = 28586 s
[2026-03-12 00:02:05] 2026-03-11 10:05:33,712 | INFO     | . stage-out = 10 s
[2026-03-12 00:02:05] 2026-03-11 10:05:33,712 | INFO     | . log creation = 2 s
[2026-03-12 00:02:05] 2026-03-11 10:05:33,712 | INFO     | ..............................
[2026-03-12 00:02:05] 2026-03-11 10:05:34,477 | INFO     | 
[2026-03-12 00:02:05] 2026-03-11 10:05:34,477 | INFO     | job summary report
[2026-03-12 00:02:05] 2026-03-11 10:05:34,477 | INFO     | --------------------------------------------------
[2026-03-12 00:02:05] 2026-03-11 10:05:34,477 | INFO     | PanDA job id: 7049258732
[2026-03-12 00:02:05] 2026-03-11 10:05:34,477 | INFO     | task id: 48967011
[2026-03-12 00:02:05] 2026-03-11 10:05:34,477 | INFO     | errors: (none)
[2026-03-12 00:02:05] 2026-03-11 10:05:34,477 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 00:02:05] 2026-03-11 10:05:34,478 | INFO     | pilot state: finished 
[2026-03-12 00:02:05] 2026-03-11 10:05:34,478 | INFO     | transexitcode: 0
[2026-03-12 00:02:05] 2026-03-11 10:05:34,478 | INFO     | exeerrorcode: 0
[2026-03-12 00:02:05] 2026-03-11 10:05:34,478 | INFO     | exeerrordiag: 
[2026-03-12 00:02:05] 2026-03-11 10:05:34,478 | INFO     | exitcode: 0
[2026-03-12 00:02:05] 2026-03-11 10:05:34,478 | INFO     | exitmsg: OK
[2026-03-12 00:02:05] 2026-03-11 10:05:34,478 | INFO     | cpuconsumptiontime: 60672 s
[2026-03-12 00:02:05] 2026-03-11 10:05:34,478 | INFO     | nevents: 400
[2026-03-12 00:02:05] 2026-03-11 10:05:34,478 | INFO     | neventsw: 0
[2026-03-12 00:02:05] 2026-03-11 10:05:34,478 | INFO     | pid: 1533047
[2026-03-12 00:02:05] 2026-03-11 10:05:34,479 | INFO     | pgrp: 1533047
[2026-03-12 00:02:05] 2026-03-11 10:05:34,479 | INFO     | corecount: 8
[2026-03-12 00:02:05] 2026-03-11 10:05:34,479 | INFO     | event service: False
[2026-03-12 00:02:05] 2026-03-11 10:05:34,479 | INFO     | sizes: {0: 2279749, 1: 2279833, 3: 2279833, 4: 2280294, 5: 2280294, 28639: 2317194, 28650: 2326192, 28651: 2326248, 28653: 2326442}
[2026-03-12 00:02:05] 2026-03-11 10:05:34,479 | INFO     | --------------------------------------------------
[2026-03-12 00:02:05] 2026-03-11 10:05:34,479 | INFO     | 
[2026-03-12 00:02:05] 2026-03-11 10:05:34,479 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-12 00:02:05] 2026-03-11 10:05:34,512 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 00:02:05] 2026-03-11 10:05:34,513 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 00:02:05] 2026-03-11 10:05:34,513 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 00:02:05] 2026-03-11 10:05:34,513 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 00:02:05] 2026-03-11 10:05:34,513 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 00:02:05] 2026-03-11 10:05:34,513 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 00:02:05] 2026-03-11 10:05:34,513 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 00:02:05] 2026-03-11 10:05:34,514 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 00:02:05] 2026-03-11 10:05:34,514 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 00:02:05] 2026-03-11 10:05:34,514 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 00:02:05] 2026-03-11 10:05:34,514 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 00:02:05] 2026-03-11 10:05:34,514 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 00:02:05] 2026-03-11 10:05:34,514 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 00:02:05] 2026-03-11 10:05:34,514 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 00:02:05] 2026-03-11 10:05:34,514 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 00:02:05] 2026-03-11 10:05:34,514 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 00:02:05] 2026-03-11 10:05:34,515 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 00:02:05] 2026-03-11 10:05:34,515 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 00:02:05] 2026-03-11 10:05:34,515 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 00:02:05] 2026-03-11 10:05:34,515 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 00:02:05] 2026-03-11 10:05:34,515 | INFO     | job 7049258732 has completed (purged errors)
[2026-03-12 00:02:05] 2026-03-11 10:05:34,515 | INFO     | overall cleanup function is called
[2026-03-12 00:02:05] 2026-03-11 10:05:34,832 | INFO     | PID=1524840 has CPU usage=11.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-12 00:02:05] 2026-03-11 10:05:34,833 | INFO     | .. there are 45 such processes running
[2026-03-12 00:02:05] 2026-03-11 10:05:35,530 | INFO     | --- collectZombieJob: --- 10, [1533047]
[2026-03-12 00:02:05] 2026-03-11 10:05:35,530 | INFO     | zombie collector waiting for pid 1533047
[2026-03-12 00:02:05] 2026-03-11 10:05:35,530 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 00:02:05] 2026-03-11 10:05:35,530 | INFO     | collected zombie processes
[2026-03-12 00:02:05] 2026-03-11 10:05:35,530 | INFO     | will attempt to kill all subprocesses of pid=1533047
[2026-03-12 00:02:05] 2026-03-11 10:05:36,395 | INFO     | process IDs to be killed: [1533047] (in reverse order)
[2026-03-12 00:02:05] 2026-03-11 10:05:36,787 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 00:02:05] 2026-03-11 10:05:36,787 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 00:02:05] 2026-03-11 10:05:36,901 | INFO     | did not find any defunct processes belonging to 1533047
[2026-03-12 00:02:05] 2026-03-11 10:05:36,919 | INFO     | did not find any defunct processes belonging to 1533047
[2026-03-12 00:02:05] 2026-03-11 10:05:36,920 | INFO     | ready for new job
[2026-03-12 00:02:05] 2026-03-11 10:05:36,920 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 00:02:05] 2026-03-11 10:05:36,923 | INFO     | **************************************
[2026-03-12 00:02:05] 2026-03-11 10:05:36,923 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-12 00:02:05] 2026-03-11 10:05:36,923 | INFO     | **************************************
[2026-03-12 00:02:05] 2026-03-11 10:05:36,924 | INFO     | 
[2026-03-12 00:02:05] 2026-03-11 10:05:36,926 | INFO     | architecture information:
[2026-03-12 00:02:05] 2026-03-11 10:05:36,926 | INFO     | executing command: cat /etc/os-release
[2026-03-12 00:02:05] 2026-03-11 10:05:36,971 | INFO     | cat /etc/os-release:
[2026-03-12 00:02:05] NAME="CentOS Linux"
[2026-03-12 00:02:05] VERSION="7 (Core)"
[2026-03-12 00:02:05] ID="centos"
[2026-03-12 00:02:05] ID_LIKE="rhel fedora"
[2026-03-12 00:02:05] VERSION_ID="7"
[2026-03-12 00:02:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 00:02:05] ANSI_COLOR="0;31"
[2026-03-12 00:02:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 00:02:05] HOME_URL="https://www.centos.org/"
[2026-03-12 00:02:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 00:02:05] 
[2026-03-12 00:02:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 00:02:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 00:02:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 00:02:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 00:02:05] 
[2026-03-12 00:02:05] 2026-03-11 10:05:36,985 | INFO     | **************************************
[2026-03-12 00:02:05] 2026-03-11 10:05:37,489 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-12 00:02:05] 2026-03-11 10:05:37,679 | INFO     | sufficient remaining disk space (74432118784 B)
[2026-03-12 00:02:05] 2026-03-11 10:05:37,680 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 00:02:05] 2026-03-11 10:05:37,680 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 00:02:05] 2026-03-11 10:05:37,680 | INFO     | update_server=False
[2026-03-12 00:02:05] 2026-03-11 10:05:37,680 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 00:02:05] 2026-03-11 10:05:37,681 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 00:02:05] 2026-03-11 10:05:37,963 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-12 00:02:05] 2026-03-11 10:05:37,963 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-12 00:02:05] 2026-03-11 10:05:37,963 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 00:02:05] 2026-03-11 10:05:37,963 | INFO     | will abort loop
[2026-03-12 00:02:05] 2026-03-11 10:05:38,054 | INFO     | all job control threads have been joined
[2026-03-12 00:02:05] 2026-03-11 10:05:38,509 | INFO     | all data control threads have been joined
[2026-03-12 00:02:05] 2026-03-11 10:05:38,543 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 00:02:05] 2026-03-11 10:05:38,686 | INFO     | [job] retrieve thread has finished
[2026-03-12 00:02:05] 2026-03-11 10:05:38,703 | INFO     | all payload control threads have been joined
[2026-03-12 00:02:05] 2026-03-11 10:05:38,891 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 00:02:05] 2026-03-11 10:05:38,970 | INFO     | [job] job monitor thread has finished
[2026-03-12 00:02:05] 2026-03-11 10:05:39,060 | INFO     | [job] control thread has finished
[2026-03-12 00:02:05] 2026-03-11 10:05:39,378 | INFO     | [payload] validate_post thread has finished
[2026-03-12 00:02:05] 2026-03-11 10:05:39,441 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 00:02:05] 2026-03-11 10:05:39,476 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 00:02:05] 2026-03-11 10:05:39,539 | INFO     | [data] control thread has finished
[2026-03-12 00:02:05] 2026-03-11 10:05:39,565 | INFO     | [data] copytool_in thread has finished
[2026-03-12 00:02:05] 2026-03-11 10:05:39,687 | INFO     | [data] copytool_out thread has finished
[2026-03-12 00:02:05] 2026-03-11 10:05:39,709 | INFO     | [payload] control thread has finished
[2026-03-12 00:02:05] 2026-03-11 10:05:39,872 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 00:02:05] 2026-03-11 10:05:39,943 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 00:02:05] 2026-03-11 10:05:39,950 | INFO     | [job] validate thread has finished
[2026-03-12 00:02:05] 2026-03-11 10:05:39,988 | INFO     | [payload] failed_post thread has finished
[2026-03-12 00:02:05] 2026-03-11 10:05:40,482 | INFO     | [job] queue monitor thread has finished
[2026-03-12 00:02:05] 2026-03-11 10:05:42,570 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 00:02:05] 2026-03-11 10:05:50,816 | INFO     | [monitor] cgroup control has ended
[2026-03-12 00:02:05] 2026-03-11 10:05:50,971 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140078626105152)>', '<ExcThread(monitor, started 140077967582976)>']
[2026-03-12 00:02:05] 2026-03-11 10:05:55,997 | INFO     | all workflow threads have been joined
[2026-03-12 00:02:05] 2026-03-11 10:05:55,997 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 00:02:05] 2026-03-11 10:05:55,997 | INFO     | traces error code: 0
[2026-03-12 00:02:05] 2026-03-11 10:05:55,997 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 00:02:05] 2026-03-11 10:06:08,132 | INFO     | PID=1524840 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 00:02:05] 2026-03-11 10:06:08,132 | INFO     | .. there are 45 such processes running
[2026-03-12 00:02:05] 2026-03-11 10:06:08,133 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 00:02:05] 2026-03-11 10:06:08,133 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 00:02:05] 2026-03-11 10:06:08,133 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 00:02:05] 2026-03-11 10:06:08,133 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 00:02:05] 2026-03-11 10:06:08,133 | INFO     | [monitor] control thread has ended
[2026-03-12 00:02:05] 2026-03-11 10:06:10,458 [wrapper] ==== pilot stdout END ====
[2026-03-12 00:02:05] 2026-03-11 10:06:10,496 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 00:02:05] 2026-03-11 10:06:10,534 [wrapper] pilotpid: 1524840
[2026-03-12 00:02:05] 2026-03-11 10:06:10,583 [wrapper] Pilot exit status: 0
[2026-03-12 00:02:05] 2026-03-11 10:06:10,810 [wrapper] pandaids: 7049258732
[2026-03-12 00:02:05] 2026-03-11 10:06:11,622 [wrapper] cleanup supervisor_pilot 3205422 1524841
[2026-03-12 00:02:05] 2026-03-11 10:06:11,681 [wrapper] Test setup, not cleaning
[2026-03-12 00:02:05] 2026-03-11 10:06:11,698 [wrapper] apfmon messages muted
[2026-03-12 00:02:05] 2026-03-11 10:06:11,743 [wrapper] ==== wrapper stdout END ====
[2026-03-12 00:02:05] 2026-03-11 10:06:11,802 [wrapper] ==== wrapper stderr END ====
[2026-03-12 00:02:05]  *** Error codes and diagnostics ***
[2026-03-12 00:02:05]     "exeErrorCode": 0,
[2026-03-12 00:02:05]     "exeErrorDiag": "",
[2026-03-12 00:02:05]     "pilotErrorCode": 0,
[2026-03-12 00:02:05]     "pilotErrorDiag": "",
[2026-03-12 00:02:05]  *** Listing of results directory ***
[2026-03-12 00:02:05] total 430492
[2026-03-12 00:02:05] -rw-r--r--. 1 boincer umatlas    585013 Mar 10 19:17 pilot3.tar.gz
[2026-03-12 00:02:05] -rwx------. 1 boincer umatlas     36322 Mar 10 19:17 runpilot2-wrapper.sh
[2026-03-12 00:02:05] -rw-r--r--. 1 boincer umatlas      5111 Mar 10 19:18 queuedata.json
[2026-03-12 00:02:05] -rw-r--r--. 1 boincer umatlas       100 Mar 10 22:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 00:02:05] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 10 22:05 run_atlas
[2026-03-12 00:02:05] -rw-r--r--. 1 boincer umatlas       105 Mar 10 22:05 job.xml
[2026-03-12 00:02:05] -rw-r--r--. 2 boincer umatlas 219235871 Mar 10 22:05 EVNT.48967008._000303.pool.root.1
[2026-03-12 00:02:05] -rw-r--r--. 2 boincer umatlas     15845 Mar 10 22:05 start_atlas.sh
[2026-03-12 00:02:05] drwxrwx--x. 2 boincer umatlas      4096 Mar 10 22:05 shared
[2026-03-12 00:02:05] -rw-r--r--. 2 boincer umatlas    597526 Mar 10 22:05 input.tar.gz
[2026-03-12 00:02:05] -rw-r--r--. 1 boincer umatlas         0 Mar 10 22:05 boinc_lockfile
[2026-03-12 00:02:05] -rw-r--r--. 1 boincer umatlas      2561 Mar 10 22:05 pandaJob.out
[2026-03-12 00:02:05] -rw-------. 1 boincer umatlas        57 Mar 10 22:05 setup.sh.local
[2026-03-12 00:02:05] -rw-------. 1 boincer umatlas   1006644 Mar 10 22:07 agis_schedconf.cvmfs.json
[2026-03-12 00:02:05] -rw-------. 1 boincer umatlas       429 Mar 10 22:07 workernode_map.json
[2026-03-12 00:02:05] drwx------. 5 boincer umatlas      4096 Mar 10 22:07 pilot3
[2026-03-12 00:02:05] -rw-------. 1 boincer umatlas 210029071 Mar 11 06:03 HITS.48967011._007701.pool.root.1
[2026-03-12 00:02:05] -rw-r--r--. 1 boincer umatlas       530 Mar 11 06:03 boinc_task_state.xml
[2026-03-12 00:02:05] -rw-------. 1 boincer umatlas      1039 Mar 11 06:05 memory_monitor_summary.json
[2026-03-12 00:02:05] -rw-------. 1 boincer umatlas   1511578 Mar 11 06:05 agis_ddmendpoints.agis.ALL.json
[2026-03-12 00:02:05] -rw-------. 1 boincer umatlas    614195 Mar 11 06:05 log.48967011._007701.job.log.tgz.1
[2026-03-12 00:02:05] -rw-------. 1 boincer umatlas      6371 Mar 11 06:05 heartbeat.json
[2026-03-12 00:02:05] -rw-------. 1 boincer umatlas        95 Mar 11 06:06 pilot_heartbeat.json
[2026-03-12 00:02:05] -rw-------. 1 boincer umatlas       823 Mar 11 06:06 pilotlog.txt
[2026-03-12 00:02:05] -rw-------. 1 boincer umatlas   3200271 Mar 11 06:06 log.48967011._007701.job.log.1
[2026-03-12 00:02:05] -rw-------. 1 boincer umatlas       357 Mar 11 06:06 output.list
[2026-03-12 00:02:05] -rw-r--r--. 1 boincer umatlas       620 Mar 11 06:06 runtime_log
[2026-03-12 00:02:05] -rw-------. 1 boincer umatlas   3829760 Mar 11 06:06 result.tar.gz
[2026-03-12 00:02:05] -rw-r--r--. 1 boincer umatlas      9327 Mar 11 06:06 runtime_log.err
[2026-03-12 00:02:05] -rw-------. 1 boincer umatlas       655 Mar 11 06:06 2oJODmoVLK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm1ThLDmTUq6tn.diag
[2026-03-12 00:02:05] -rw-r--r--. 1 boincer umatlas        27 Mar 12 00:01 wrapper_checkpoint.txt
[2026-03-12 00:02:05] -rw-r--r--. 1 boincer umatlas      6660 Mar 12 00:02 init_data.xml
[2026-03-12 00:02:05] -rw-r--r--. 1 boincer umatlas      8192 Mar 12 00:02 boinc_mmap_file
[2026-03-12 00:02:05] -rw-r--r--. 1 boincer umatlas     21267 Mar 12 00:02 stderr.txt
[2026-03-12 00:02:05] HITS file was successfully produced:
[2026-03-12 00:02:05] -rw-------. 1 boincer umatlas 210029071 Mar 11 06:03 shared/HITS.pool.root.1
[2026-03-12 00:02:05]  *** Contents of shared directory: ***
[2026-03-12 00:02:05] total 423552
[2026-03-12 00:02:05] -rw-r--r--. 2 boincer umatlas 219235871 Mar 10 22:05 ATLAS.root_0
[2026-03-12 00:02:05] -rw-r--r--. 2 boincer umatlas     15845 Mar 10 22:05 start_atlas.sh
[2026-03-12 00:02:05] -rw-r--r--. 2 boincer umatlas    597526 Mar 10 22:05 input.tar.gz
[2026-03-12 00:02:05] -rw-------. 1 boincer umatlas 210029071 Mar 11 06:03 HITS.pool.root.1
[2026-03-12 00:02:05] -rw-------. 1 boincer umatlas   3829760 Mar 11 06:06 result.tar.gz
00:02:06 (1519237): run_atlas exited; CPU time 62054.558450
00:02:06 (1519237): called boinc_finish(0)

</stderr_txt>
]]>

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