Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:03:38 (3122661): wrapper (7.7.26015): starting
19:03:38 (3122661): wrapper: running run_atlas (--nthreads 12)
[2026-03-10 19:03:38] Arguments: --nthreads 12
[2026-03-10 19:03:38] Threads: 12
[2026-03-10 19:03:38] Checking for CVMFS
[2026-03-10 19:03:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-10 19:03:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-10 19:03:38] Running cvmfs_config stat atlas.cern.ch
[2026-03-10 19:03:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-10 19:03:38] 2.13.3.0 16090 180397 591016 157132 1 195 22723728 32935936 8835 16776704 0 1848215583 99.586 1973636179 50790 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-10 19:03:38] CVMFS is ok
[2026-03-10 19:03:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 19:03:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 19:03:38] Further information can be found at the LHC@home message board.
[2026-03-10 19:03:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 19:03:38] Checking for apptainer binary...
[2026-03-10 19:03:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-10 19:03:38] Running /usr/bin/apptainer --version
[2026-03-10 19:03:38] apptainer version 1.4.5-2.el9
[2026-03-10 19:03:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 19:03:39] c7-9-15.aglt2.org
[2026-03-10 19:03:39] apptainer works
[2026-03-10 19:03:39] Set ATHENA_PROC_NUMBER=12
[2026-03-10 19:03:39] Set ATHENA_CORE_NUMBER=12
[2026-03-10 19:03:39] Starting ATLAS job with PandaID=7036071730
[2026-03-10 19:03:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 19:47:02]  *** The last 200 lines of the pilot log: ***
[2026-03-10 19:47:02]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-10 19:47:02]  is_altstaged=None
[2026-03-10 19:47:02]  is_tar=False
[2026-03-10 19:47:02]  lfn=log.48850836._000016.job.log.tgz.1
[2026-03-10 19:47:02]  mtime=0
[2026-03-10 19:47:02]  protocol_id=None
[2026-03-10 19:47:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-10 19:47:02]  replicas=None
[2026-03-10 19:47:02]  scope=mc23_13p6TeV
[2026-03-10 19:47:02]  status=None
[2026-03-10 19:47:02]  status_code=0
[2026-03-10 19:47:02]  storage_token=
[2026-03-10 19:47:02]  surl=/tmp/boinchome/slots/5/PanDA_Pilot-7036071730/log.48850836._000016.job.log.tgz.1
[2026-03-10 19:47:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/e4/log.48850836._000016.job.log.tgz.1
[2026-03-10 19:47:02]  workdir=None
[2026-03-10 19:47:02] ]
[2026-03-10 19:47:02] 2026-03-10 23:46:26,232 | INFO     | transferring file log.48850836._000016.job.log.tgz.1 from /tmp/boinchome/slots/5/PanDA_Pilot-7036071730/log.48850836._000016.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-10 19:47:02] 2026-03-10 23:46:26,232 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/5/PanDA_Pilot-7036071730/log.48850836._000016.job.log.tgz.1 /tmp/boinchome/slots/5/log.48850836._000016.job
[2026-03-10 19:47:02] 2026-03-10 23:46:26,252 | INFO     | adding to output.list: log.48850836._000016.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/e4/log.48850836._000016.job.log.tg
[2026-03-10 19:47:02] 2026-03-10 23:46:26,252 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-10 19:47:02] 2026-03-10 23:46:26,252 | INFO     | summary of transferred files:
[2026-03-10 19:47:02] 2026-03-10 23:46:26,252 | INFO     |  -- lfn=log.48850836._000016.job.log.tgz.1, status_code=0, status=transferred
[2026-03-10 19:47:02] 2026-03-10 23:46:26,253 | INFO     | stage-out finished correctly
[2026-03-10 19:47:02] 2026-03-10 23:46:27,187 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-10 19:47:02] 2026-03-10 23:46:27,187 | INFO     | time since job start (2556s) is within the limit (349056.0s)
[2026-03-10 19:47:02] 2026-03-10 23:46:28,047 | WARNING  | process 3133007 can no longer be monitored (due to stat problems) - aborting
[2026-03-10 19:47:02] 2026-03-10 23:46:28,048 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-7036071730/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 19:47:02] 2026-03-10 23:46:28,362 | INFO     | number of running child processes to parent process 3133007: 1
[2026-03-10 19:47:02] 2026-03-10 23:46:28,362 | INFO     | maximum number of monitored processes: 6
[2026-03-10 19:47:02] 2026-03-10 23:46:29,203 | INFO     | time since job start (2558s) is within the limit (349056.0s)
[2026-03-10 19:47:02] 2026-03-10 23:46:29,631 | INFO     | job 7036071730 has state=finished
[2026-03-10 19:47:02] 2026-03-10 23:46:29,631 | INFO     | preparing for final server update for job 7036071730 in state='finished'
[2026-03-10 19:47:02] 2026-03-10 23:46:29,632 | INFO     | reading metadata from: /tmp/boinchome/slots/5/PanDA_Pilot-7036071730/jobReport.json
[2026-03-10 19:47:02] 2026-03-10 23:46:29,633 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/5/workernode_map.json
[2026-03-10 19:47:02] 2026-03-10 23:46:29,633 | INFO     | this job has now completed (state=finished)
[2026-03-10 19:47:02] 2026-03-10 23:46:29,634 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 19:47:02] 2026-03-10 23:46:29,634 | INFO     | log transfer has been attempted: DONE
[2026-03-10 19:47:02] 2026-03-10 23:46:29,634 | INFO     | job 7036071730 has finished - writing final server update
[2026-03-10 19:47:02] 2026-03-10 23:46:29,634 | INFO     | total number of processed events: 400 (read)
[2026-03-10 19:47:02] 2026-03-10 23:46:29,647 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-7036071730/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 19:47:02] 2026-03-10 23:46:29,647 | INFO     | extracted standard info from prmon json
[2026-03-10 19:47:02] 2026-03-10 23:46:29,647 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 19:47:02] 2026-03-10 23:46:29,647 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 19:47:02] 2026-03-10 23:46:29,647 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 19:47:02] 2026-03-10 23:46:29,647 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 19:47:02] 2026-03-10 23:46:29,648 | INFO     | fitting pss+swap vs Time
[2026-03-10 19:47:02] 2026-03-10 23:46:29,648 | INFO     | sum of square deviations: 13283970.0
[2026-03-10 19:47:02] 2026-03-10 23:46:29,648 | INFO     | sum of deviations: 112977124.00000003
[2026-03-10 19:47:02] 2026-03-10 23:46:29,648 | INFO     | mean x: 1773185194.0
[2026-03-10 19:47:02] 2026-03-10 23:46:29,648 | INFO     | mean y: 2712994.9142857143
[2026-03-10 19:47:02] 2026-03-10 23:46:29,648 | INFO     | intersect: -15077821178.040194
[2026-03-10 19:47:02] 2026-03-10 23:46:29,648 | INFO     | chi2: 4.678277313652178e-05
[2026-03-10 19:47:02] 2026-03-10 23:46:29,648 | INFO     | current memory leak: 8.50 B/s (using 35 data points, chi2=0.00)
[2026-03-10 19:47:02] 2026-03-10 23:46:29,649 | INFO     | could have reported an average CPU frequency of 3705 MHz (5 samples)
[2026-03-10 19:47:02] 2026-03-10 23:46:29,649 | INFO     | ..............................
[2026-03-10 19:47:02] 2026-03-10 23:46:29,649 | INFO     | . Timing measurements:
[2026-03-10 19:47:02] 2026-03-10 23:46:29,649 | INFO     | . get job = 0 s
[2026-03-10 19:47:02] 2026-03-10 23:46:29,649 | INFO     | . initial setup = 5 s
[2026-03-10 19:47:02] 2026-03-10 23:46:29,649 | INFO     | . payload setup = 4 s
[2026-03-10 19:47:02] 2026-03-10 23:46:29,649 | INFO     | . stage-in = 0 s
[2026-03-10 19:47:02] 2026-03-10 23:46:29,649 | INFO     | . payload execution = 2534 s
[2026-03-10 19:47:02] 2026-03-10 23:46:29,649 | INFO     | . stage-out = 0 s
[2026-03-10 19:47:02] 2026-03-10 23:46:29,649 | INFO     | . log creation = 0 s
[2026-03-10 19:47:02] 2026-03-10 23:46:29,649 | INFO     | ..............................
[2026-03-10 19:47:02] 2026-03-10 23:46:29,700 | INFO     | 
[2026-03-10 19:47:02] 2026-03-10 23:46:29,701 | INFO     | job summary report
[2026-03-10 19:47:02] 2026-03-10 23:46:29,701 | INFO     | --------------------------------------------------
[2026-03-10 19:47:02] 2026-03-10 23:46:29,701 | INFO     | PanDA job id: 7036071730
[2026-03-10 19:47:02] 2026-03-10 23:46:29,701 | INFO     | task id: 48850836
[2026-03-10 19:47:02] 2026-03-10 23:46:29,701 | INFO     | errors: (none)
[2026-03-10 19:47:02] 2026-03-10 23:46:29,701 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 19:47:02] 2026-03-10 23:46:29,701 | INFO     | pilot state: finished 
[2026-03-10 19:47:02] 2026-03-10 23:46:29,701 | INFO     | transexitcode: 0
[2026-03-10 19:47:02] 2026-03-10 23:46:29,701 | INFO     | exeerrorcode: 0
[2026-03-10 19:47:02] 2026-03-10 23:46:29,701 | INFO     | exeerrordiag: 
[2026-03-10 19:47:02] 2026-03-10 23:46:29,701 | INFO     | exitcode: 0
[2026-03-10 19:47:02] 2026-03-10 23:46:29,701 | INFO     | exitmsg: OK
[2026-03-10 19:47:02] 2026-03-10 23:46:29,701 | INFO     | cpuconsumptiontime: 27293 s
[2026-03-10 19:47:02] 2026-03-10 23:46:29,701 | INFO     | nevents: 400
[2026-03-10 19:47:02] 2026-03-10 23:46:29,701 | INFO     | neventsw: 0
[2026-03-10 19:47:02] 2026-03-10 23:46:29,701 | INFO     | pid: 3133007
[2026-03-10 19:47:02] 2026-03-10 23:46:29,701 | INFO     | pgrp: 3133007
[2026-03-10 19:47:02] 2026-03-10 23:46:29,701 | INFO     | corecount: 12
[2026-03-10 19:47:02] 2026-03-10 23:46:29,702 | INFO     | event service: False
[2026-03-10 19:47:02] 2026-03-10 23:46:29,702 | INFO     | sizes: {0: 2280308, 11: 2280308, 2542: 2305580, 2543: 2314633, 2544: 2314633, 2547: 2314859}
[2026-03-10 19:47:02] 2026-03-10 23:46:29,702 | INFO     | --------------------------------------------------
[2026-03-10 19:47:02] 2026-03-10 23:46:29,702 | INFO     | 
[2026-03-10 19:47:02] 2026-03-10 23:46:29,702 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-03-10 19:47:02] 2026-03-10 23:46:29,721 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 19:47:02] 2026-03-10 23:46:29,722 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 19:47:02] 2026-03-10 23:46:29,722 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 19:47:02] 2026-03-10 23:46:29,722 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 19:47:02] 2026-03-10 23:46:29,722 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 19:47:02] 2026-03-10 23:46:29,722 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 19:47:02] 2026-03-10 23:46:29,722 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 19:47:02] 2026-03-10 23:46:29,722 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 19:47:02] 2026-03-10 23:46:29,722 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 19:47:02] 2026-03-10 23:46:29,722 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 19:47:02] 2026-03-10 23:46:29,722 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 19:47:02] 2026-03-10 23:46:29,722 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 19:47:02] 2026-03-10 23:46:29,722 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 19:47:02] 2026-03-10 23:46:29,722 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 19:47:02] 2026-03-10 23:46:29,722 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 19:47:02] 2026-03-10 23:46:29,722 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 19:47:02] 2026-03-10 23:46:29,722 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 19:47:02] 2026-03-10 23:46:29,723 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 19:47:02] 2026-03-10 23:46:29,723 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 19:47:02] 2026-03-10 23:46:29,723 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 19:47:02] 2026-03-10 23:46:29,724 | INFO     | job 7036071730 has completed (purged errors)
[2026-03-10 19:47:02] 2026-03-10 23:46:29,724 | INFO     | overall cleanup function is called
[2026-03-10 19:47:02] 2026-03-10 23:46:30,732 | INFO     | --- collectZombieJob: --- 10, [3133007]
[2026-03-10 19:47:02] 2026-03-10 23:46:30,732 | INFO     | zombie collector waiting for pid 3133007
[2026-03-10 19:47:02] 2026-03-10 23:46:30,733 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 19:47:02] 2026-03-10 23:46:30,733 | INFO     | collected zombie processes
[2026-03-10 19:47:02] 2026-03-10 23:46:30,733 | INFO     | will attempt to kill all subprocesses of pid=3133007
[2026-03-10 19:47:02] 2026-03-10 23:46:31,049 | INFO     | process IDs to be killed: [3133007] (in reverse order)
[2026-03-10 19:47:02] 2026-03-10 23:46:31,161 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 19:47:02] 2026-03-10 23:46:31,161 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 19:47:02] 2026-03-10 23:46:31,176 | INFO     | did not find any defunct processes belonging to 3133007
[2026-03-10 19:47:02] 2026-03-10 23:46:31,189 | INFO     | did not find any defunct processes belonging to 3133007
[2026-03-10 19:47:02] 2026-03-10 23:46:31,189 | INFO     | ready for new job
[2026-03-10 19:47:02] 2026-03-10 23:46:31,189 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 19:47:02] 2026-03-10 23:46:31,191 | INFO     | **************************************
[2026-03-10 19:47:02] 2026-03-10 23:46:31,191 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 19:47:02] 2026-03-10 23:46:31,191 | INFO     | **************************************
[2026-03-10 19:47:02] 2026-03-10 23:46:31,191 | INFO     | 
[2026-03-10 19:47:02] 2026-03-10 23:46:31,196 | INFO     | architecture information:
[2026-03-10 19:47:02] 2026-03-10 23:46:31,196 | INFO     | executing command: cat /etc/os-release
[2026-03-10 19:47:02] 2026-03-10 23:46:31,212 | INFO     | cat /etc/os-release:
[2026-03-10 19:47:02] NAME="CentOS Linux"
[2026-03-10 19:47:02] VERSION="7 (Core)"
[2026-03-10 19:47:02] ID="centos"
[2026-03-10 19:47:02] ID_LIKE="rhel fedora"
[2026-03-10 19:47:02] VERSION_ID="7"
[2026-03-10 19:47:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 19:47:02] ANSI_COLOR="0;31"
[2026-03-10 19:47:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 19:47:02] HOME_URL="https://www.centos.org/"
[2026-03-10 19:47:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 19:47:02] 
[2026-03-10 19:47:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 19:47:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 19:47:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 19:47:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 19:47:02] 
[2026-03-10 19:47:02] 2026-03-10 23:46:31,212 | INFO     | **************************************
[2026-03-10 19:47:02] 2026-03-10 23:46:31,714 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-03-10 19:47:02] 2026-03-10 23:46:31,726 | INFO     | sufficient remaining disk space (70914146304 B)
[2026-03-10 19:47:02] 2026-03-10 23:46:31,727 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 19:47:02] 2026-03-10 23:46:31,727 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 19:47:02] 2026-03-10 23:46:31,727 | INFO     | update_server=False
[2026-03-10 19:47:02] 2026-03-10 23:46:31,727 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 19:47:02] 2026-03-10 23:46:31,781 | INFO     | all payload control threads have been joined
[2026-03-10 19:47:02] 2026-03-10 23:46:31,818 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 19:47:02] 2026-03-10 23:46:31,870 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 19:47:02] 2026-03-10 23:46:31,871 | INFO     | aborting loop
[2026-03-10 19:47:02] 2026-03-10 23:46:31,881 | INFO     | all data control threads have been joined
[2026-03-10 19:47:02] 2026-03-10 23:46:32,533 | INFO     | all job control threads have been joined
[2026-03-10 19:47:02] 2026-03-10 23:46:32,732 | INFO     | [job] retrieve thread has finished
[2026-03-10 19:47:02] 2026-03-10 23:46:32,786 | INFO     | [payload] control thread has finished
[2026-03-10 19:47:02] 2026-03-10 23:46:32,876 | INFO     | [job] job monitor thread has finished
[2026-03-10 19:47:02] 2026-03-10 23:46:32,887 | INFO     | [data] control thread has finished
[2026-03-10 19:47:02] 2026-03-10 23:46:33,152 | INFO     | [payload] validate_post thread has finished
[2026-03-10 19:47:02] 2026-03-10 23:46:33,248 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 19:47:02] 2026-03-10 23:46:33,273 | INFO     | [job] validate thread has finished
[2026-03-10 19:47:02] 2026-03-10 23:46:33,437 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 19:47:02] 2026-03-10 23:46:33,536 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 19:47:02] 2026-03-10 23:46:33,538 | INFO     | [job] control thread has finished
[2026-03-10 19:47:02] 2026-03-10 23:46:33,738 | INFO     | [data] copytool_in thread has finished
[2026-03-10 19:47:02] 2026-03-10 23:46:33,822 | INFO     | [data] copytool_out thread has finished
[2026-03-10 19:47:02] 2026-03-10 23:46:33,823 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 19:47:02] 2026-03-10 23:46:34,043 | INFO     | [payload] failed_post thread has finished
[2026-03-10 19:47:02] 2026-03-10 23:46:34,711 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 19:47:02] 2026-03-10 23:46:35,717 | INFO     | [job] queue monitor thread has finished
[2026-03-10 19:47:02] 2026-03-10 23:46:37,254 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 19:47:02] 2026-03-10 23:46:42,504 | INFO     | job.realtimelogging is not enabled
[2026-03-10 19:47:02] 2026-03-10 23:46:43,510 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 19:47:02] 2026-03-10 23:46:55,044 | INFO     | [monitor] cgroup control has ended
[2026-03-10 19:47:02] 2026-03-10 23:46:55,281 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140129280538432)>', '<ExcThread(monitor, started 140128794171136)>']
[2026-03-10 19:47:02] 2026-03-10 23:47:00,307 | INFO     | all workflow threads have been joined
[2026-03-10 19:47:02] 2026-03-10 23:47:00,307 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 19:47:02] 2026-03-10 23:47:00,307 | INFO     | traces error code: 0
[2026-03-10 19:47:02] 2026-03-10 23:47:00,308 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 19:47:02] 2026-03-10 23:47:02,679 | INFO     | PID=3126372 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 19:47:02] 2026-03-10 23:47:02,679 | INFO     | .. there are 11 such processes running
[2026-03-10 19:47:02] 2026-03-10 23:47:02,680 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 19:47:02] 2026-03-10 23:47:02,680 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 19:47:02] 2026-03-10 23:47:02,680 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 19:47:02] 2026-03-10 23:47:02,680 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 19:47:02] 2026-03-10 23:47:02,681 | INFO     | [monitor] control thread has ended
[2026-03-10 19:47:02] 2026-03-10 23:47:02,769 [wrapper] ==== pilot stdout END ====
[2026-03-10 19:47:02] 2026-03-10 23:47:02,771 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 19:47:02] 2026-03-10 23:47:02,773 [wrapper] pilotpid: 3126372
[2026-03-10 19:47:02] 2026-03-10 23:47:02,774 [wrapper] Pilot exit status: 0
[2026-03-10 19:47:02] 2026-03-10 23:47:02,785 [wrapper] pandaids: 7036071730
[2026-03-10 19:47:02] 2026-03-10 23:47:02,862 [wrapper] cleanup supervisor_pilot 3271548 3126373
[2026-03-10 19:47:02] 2026-03-10 23:47:02,866 [wrapper] Test setup, not cleaning
[2026-03-10 19:47:02] 2026-03-10 23:47:02,868 [wrapper] apfmon messages muted
[2026-03-10 19:47:02] 2026-03-10 23:47:02,871 [wrapper] ==== wrapper stdout END ====
[2026-03-10 19:47:02] 2026-03-10 23:47:02,873 [wrapper] ==== wrapper stderr END ====
[2026-03-10 19:47:02]  *** Error codes and diagnostics ***
[2026-03-10 19:47:02]     "exeErrorCode": 0,
[2026-03-10 19:47:02]     "exeErrorDiag": "",
[2026-03-10 19:47:02]     "pilotErrorCode": 0,
[2026-03-10 19:47:02]     "pilotErrorDiag": "",
[2026-03-10 19:47:02]  *** Listing of results directory ***
[2026-03-10 19:47:02] total 449900
[2026-03-10 19:47:02] -rw-r--r--. 1 boincer umatlas    584627 Mar  2 13:26 pilot3.tar.gz
[2026-03-10 19:47:02] -rwx------. 1 boincer umatlas     36322 Mar  2 13:29 runpilot2-wrapper.sh
[2026-03-10 19:47:02] -rw-r--r--. 1 boincer umatlas      5111 Mar  2 13:30 queuedata.json
[2026-03-10 19:47:02] -rw-r--r--. 1 boincer umatlas       100 Mar 10 19:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 19:47:02] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 10 19:03 run_atlas
[2026-03-10 19:47:02] -rw-r--r--. 1 boincer umatlas       105 Mar 10 19:03 job.xml
[2026-03-10 19:47:02] -rw-r--r--. 2 boincer umatlas 255024357 Mar 10 19:03 EVNT.48459352._000001.pool.root.1
[2026-03-10 19:47:02] -rw-r--r--. 2 boincer umatlas     15845 Mar 10 19:03 start_atlas.sh
[2026-03-10 19:47:02] drwxrwx--x. 2 boincer umatlas      4096 Mar 10 19:03 shared
[2026-03-10 19:47:02] -rw-r--r--. 2 boincer umatlas    597966 Mar 10 19:03 input.tar.gz
[2026-03-10 19:47:02] -rw-r--r--. 1 boincer umatlas         0 Mar 10 19:03 boinc_lockfile
[2026-03-10 19:47:02] -rw-r--r--. 1 boincer umatlas      2618 Mar 10 19:03 pandaJob.out
[2026-03-10 19:47:02] -rw-------. 1 boincer umatlas        57 Mar 10 19:03 setup.sh.local
[2026-03-10 19:47:02] -rw-------. 1 boincer umatlas   1006644 Mar 10 19:03 agis_schedconf.cvmfs.json
[2026-03-10 19:47:02] -rw-------. 1 boincer umatlas   1511578 Mar 10 19:03 agis_ddmendpoints.agis.ALL.json
[2026-03-10 19:47:02] -rw-------. 1 boincer umatlas       430 Mar 10 19:03 workernode_map.json
[2026-03-10 19:47:02] drwx------. 5 boincer umatlas      4096 Mar 10 19:03 pilot3
[2026-03-10 19:47:02] -rw-------. 1 boincer umatlas 200196108 Mar 10 19:46 HITS.48850836._000016.pool.root.1
[2026-03-10 19:47:02] -rw-r--r--. 1 boincer umatlas       529 Mar 10 19:46 boinc_task_state.xml
[2026-03-10 19:47:02] -rw-------. 1 boincer umatlas      1026 Mar 10 19:46 memory_monitor_summary.json
[2026-03-10 19:47:02] -rw-------. 1 boincer umatlas    363928 Mar 10 19:46 log.48850836._000016.job.log.tgz.1
[2026-03-10 19:47:02] -rw-------. 1 boincer umatlas      6306 Mar 10 19:46 heartbeat.json
[2026-03-10 19:47:02] -rw-r--r--. 1 boincer umatlas      7173 Mar 10 19:46 init_data.xml
[2026-03-10 19:47:02] -rw-r--r--. 1 boincer umatlas        27 Mar 10 19:46 wrapper_checkpoint.txt
[2026-03-10 19:47:02] -rw-r--r--. 1 boincer umatlas      8192 Mar 10 19:46 boinc_mmap_file
[2026-03-10 19:47:02] -rw-------. 1 boincer umatlas        95 Mar 10 19:47 pilot_heartbeat.json
[2026-03-10 19:47:02] -rw-------. 1 boincer umatlas       823 Mar 10 19:47 pilotlog.txt
[2026-03-10 19:47:02] -rw-------. 1 boincer umatlas    405488 Mar 10 19:47 log.48850836._000016.job.log.1
[2026-03-10 19:47:02] -rw-------. 1 boincer umatlas       357 Mar 10 19:47 output.list
[2026-03-10 19:47:02] -rw-r--r--. 1 boincer umatlas       620 Mar 10 19:47 runtime_log
[2026-03-10 19:47:02] -rw-------. 1 boincer umatlas    788480 Mar 10 19:47 result.tar.gz
[2026-03-10 19:47:02] -rw-------. 1 boincer umatlas       651 Mar 10 19:47 VK5LDmrCNH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmxVELDmOTHQGm.diag
[2026-03-10 19:47:02] -rw-r--r--. 1 boincer umatlas      9338 Mar 10 19:47 runtime_log.err
[2026-03-10 19:47:02] -rw-r--r--. 1 boincer umatlas     21445 Mar 10 19:47 stderr.txt
[2026-03-10 19:47:02] HITS file was successfully produced:
[2026-03-10 19:47:02] -rw-------. 1 boincer umatlas 200196108 Mar 10 19:46 shared/HITS.pool.root.1
[2026-03-10 19:47:02]  *** Contents of shared directory: ***
[2026-03-10 19:47:02] total 445936
[2026-03-10 19:47:02] -rw-r--r--. 2 boincer umatlas 255024357 Mar 10 19:03 ATLAS.root_0
[2026-03-10 19:47:02] -rw-r--r--. 2 boincer umatlas     15845 Mar 10 19:03 start_atlas.sh
[2026-03-10 19:47:02] -rw-r--r--. 2 boincer umatlas    597966 Mar 10 19:03 input.tar.gz
[2026-03-10 19:47:02] -rw-------. 1 boincer umatlas 200196108 Mar 10 19:46 HITS.pool.root.1
[2026-03-10 19:47:02] -rw-------. 1 boincer umatlas    788480 Mar 10 19:47 result.tar.gz
19:47:04 (3122661): run_atlas exited; CPU time 27331.089164
19:47:04 (3122661): called boinc_finish(0)

</stderr_txt>
]]>

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