Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:45:15 (3068281): wrapper (7.7.26015): starting
10:45:15 (3068281): wrapper: running run_atlas (--nthreads 3)
[2026-03-11 10:45:15] Arguments: --nthreads 3
[2026-03-11 10:45:15] Threads: 3
[2026-03-11 10:45:15] Checking for CVMFS
[2026-03-11 10:45:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 10:45:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 10:45:16] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 10:45:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 10:45:16] 2.9.2.0 85582 19802 89824 157149 1 49 24430234 36864000 0 130560 0 7921665 99.983 740085 13203 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-11 10:45:16] CVMFS is ok
[2026-03-11 10:45:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 10:45:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-11 10:45:16] Further information can be found at the LHC@home message board.
[2026-03-11 10:45:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 10:45:16] Checking for apptainer binary...
[2026-03-11 10:45:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 10:45:16] Running /usr/bin/apptainer --version
[2026-03-11 10:45:16] apptainer version 1.4.1-1.1
[2026-03-11 10:45:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 10:45:16] thA305
[2026-03-11 10:45:16] apptainer works
[2026-03-11 10:45:16] Set ATHENA_PROC_NUMBER=3
[2026-03-11 10:45:16] Set ATHENA_CORE_NUMBER=3
[2026-03-11 10:45:16] Starting ATLAS job with PandaID=7036071917
[2026-03-11 10:45:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 12:50:53]  *** The last 200 lines of the pilot log: ***
[2026-03-11 12:50:53] 2026-03-11 11:50:24,960 | INFO     | [data] copytool_in thread has finished
[2026-03-11 12:50:53] 2026-03-11 11:50:25,249 | INFO     | [payload] validate_post thread has finished
[2026-03-11 12:50:53] 2026-03-11 11:50:25,330 | INFO     | [data] copytool_out thread has finished
[2026-03-11 12:50:53] 2026-03-11 11:50:25,470 | INFO     | [payload] failed_post thread has finished
[2026-03-11 12:50:53] 2026-03-11 11:50:25,520 | INFO     | [job] control thread has finished
[2026-03-11 12:50:53] 2026-03-11 11:50:26,633 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 12:50:53] 2026-03-11 11:50:30,639 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 12:50:53] 2026-03-11 11:50:34,127 | INFO     | job.realtimelogging is not enabled
[2026-03-11 12:50:53] 2026-03-11 11:50:35,133 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 12:50:53] 2026-03-11 11:50:36,869 | INFO     | [monitor] cgroup control has ended
[2026-03-11 12:50:53] 2026-03-11 11:50:37,867 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140451407955776)>', '<ExcThread(monitor, started 140450765715200)>']
[2026-03-11 12:50:53] 2026-03-11 11:50:42,893 | INFO     | all workflow threads have been joined
[2026-03-11 12:50:53] 2026-03-11 11:50:42,893 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 12:50:53] 2026-03-11 11:50:42,894 | INFO     | traces error code: 0
[2026-03-11 12:50:53] 2026-03-11 11:50:42,894 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 12:50:53] 2026-03-11 11:50:53,278 | INFO     | PID=3072323 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-11 12:50:53] 2026-03-11 11:50:53,278 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 12:50:53] 2026-03-11 11:50:53,278 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 12:50:53] 2026-03-11 11:50:53,278 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 12:50:53] 2026-03-11 11:50:53,278 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 12:50:53] 2026-03-11 11:50:53,278 | INFO     | [monitor] control thread has ended
[2026-03-11 12:50:53] 2026-03-11 11:50:53,324 [wrapper] ==== pilot stdout END ====
[2026-03-11 12:50:53] 2026-03-11 11:50:53,327 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 12:50:53] 2026-03-11 11:50:53,329 [wrapper] pilotpid: 3072323
[2026-03-11 12:50:53] 2026-03-11 11:50:53,331 [wrapper] Pilot exit status: 0
[2026-03-11 12:50:53] 2026-03-11 11:50:53,338 [wrapper] pandaids: 7036071917
[2026-03-11 12:50:53] 2026-03-11 11:50:53,355 [wrapper] cleanup supervisor_pilot 3083729 3072324
[2026-03-11 12:50:53] 2026-03-11 11:50:53,358 [wrapper] Test setup, not cleaning
[2026-03-11 12:50:53] 2026-03-11 11:50:53,360 [wrapper] apfmon messages muted
[2026-03-11 12:50:53] 2026-03-11 11:50:53,362 [wrapper] ==== wrapper stdout END ====
[2026-03-11 12:50:53] 2026-03-11 11:50:53,365 [wrapper] ==== wrapper stderr END ====
[2026-03-11 12:50:53]  *** Error codes and diagnostics ***
[2026-03-11 12:50:53]     "exeErrorCode": 0,
[2026-03-11 12:50:53]     "exeErrorDiag": "",
[2026-03-11 12:50:53]     "pilotErrorCode": 0,
[2026-03-11 12:50:53]     "pilotErrorDiag": "",
[2026-03-11 12:50:53]  *** Listing of results directory ***
[2026-03-11 12:50:53] total 494128
[2026-03-11 12:50:53] -rw-r--r-- 1 boinc boinc      5111 Mar  2 19:26 queuedata.json
[2026-03-11 12:50:53] -rw-r--r-- 1 boinc boinc    584627 Mar  2 19:26 pilot3.tar.gz
[2026-03-11 12:50:53] -rwx------ 1 boinc boinc     36322 Mar  2 19:27 runpilot2-wrapper.sh
[2026-03-11 12:50:53] -rw-r--r-- 1 boinc boinc       100 Mar 11 10:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 12:50:53] -rwxr-xr-x 1 boinc boinc      7986 Mar 11 10:45 run_atlas
[2026-03-11 12:50:53] -rw-r--r-- 1 boinc boinc       105 Mar 11 10:45 job.xml
[2026-03-11 12:50:53] -rw-r--r-- 2 boinc boinc 265844631 Mar 11 10:45 EVNT.48459645._000002.pool.root.1
[2026-03-11 12:50:53] -rw-r--r-- 2 boinc boinc    597957 Mar 11 10:45 input.tar.gz
[2026-03-11 12:50:53] -rw-r--r-- 2 boinc boinc     15845 Mar 11 10:45 start_atlas.sh
[2026-03-11 12:50:53] drwxrwx--x 2 boinc boinc      4096 Mar 11 10:45 shared
[2026-03-11 12:50:53] -rw-r--r-- 1 boinc boinc         0 Mar 11 10:45 boinc_setup_complete
[2026-03-11 12:50:53] -rw-r--r-- 1 boinc boinc      6439 Mar 11 10:45 init_data.xml
[2026-03-11 12:50:53] -rw-r--r-- 1 boinc boinc         0 Mar 11 10:45 boinc_lockfile
[2026-03-11 12:50:53] -rw-r--r-- 1 boinc boinc      2619 Mar 11 10:45 pandaJob.out
[2026-03-11 12:50:53] -rw------- 1 boinc boinc   1006978 Mar 11 10:45 agis_schedconf.cvmfs.json
[2026-03-11 12:50:53] -rw------- 1 boinc boinc   1511578 Mar 11 10:45 agis_ddmendpoints.agis.ALL.json
[2026-03-11 12:50:53] -rw------- 1 boinc boinc       427 Mar 11 10:45 workernode_map.json
[2026-03-11 12:50:53] drwx------ 5 boinc boinc      4096 Mar 11 10:45 pilot3
[2026-03-11 12:50:53] -rw------- 1 boinc boinc 233468227 Mar 11 12:49 HITS.48851070._000048.pool.root.1
[2026-03-11 12:50:53] -rw------- 1 boinc boinc        95 Mar 11 12:50 pilot_heartbeat.json
[2026-03-11 12:50:53] -rw-r--r-- 1 boinc boinc       529 Mar 11 12:50 boinc_task_state.xml
[2026-03-11 12:50:53] -rw------- 1 boinc boinc      1018 Mar 11 12:50 memory_monitor_summary.json
[2026-03-11 12:50:53] -rw------- 1 boinc boinc    301153 Mar 11 12:50 log.48851070._000048.job.log.tgz.1
[2026-03-11 12:50:53] -rw------- 1 boinc boinc      6297 Mar 11 12:50 heartbeat.json
[2026-03-11 12:50:53] -rw-r--r-- 1 boinc boinc      8192 Mar 11 12:50 boinc_mmap_file
[2026-03-11 12:50:53] -rw-r--r-- 1 boinc boinc        27 Mar 11 12:50 wrapper_checkpoint.txt
[2026-03-11 12:50:53] -rw------- 1 boinc boinc       747 Mar 11 12:50 pilotlog.txt
[2026-03-11 12:50:53] -rw------- 1 boinc boinc   1077921 Mar 11 12:50 log.48851070._000048.job.log.1
[2026-03-11 12:50:53] -rw------- 1 boinc boinc       357 Mar 11 12:50 output.list
[2026-03-11 12:50:53] -rw-r--r-- 1 boinc boinc       620 Mar 11 12:50 runtime_log
[2026-03-11 12:50:53] -rw------- 1 boinc boinc   1392640 Mar 11 12:50 result.tar.gz
[2026-03-11 12:50:53] -rw-r--r-- 1 boinc boinc      8896 Mar 11 12:50 runtime_log.err
[2026-03-11 12:50:53] -rw------- 1 boinc boinc       657 Mar 11 12:50 NtDLDm39MH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmmPCLDmsk3lmn.diag
[2026-03-11 12:50:53] -rw-r--r-- 1 boinc boinc      5638 Mar 11 12:50 stderr.txt
[2026-03-11 12:50:53] HITS file was successfully produced:
[2026-03-11 12:50:53] -rw------- 1 boinc boinc 233468227 Mar 11 12:49 shared/HITS.pool.root.1
[2026-03-11 12:50:53]  *** Contents of shared directory: ***
[2026-03-11 12:50:53] total 489584
[2026-03-11 12:50:53] -rw-r--r-- 2 boinc boinc 265844631 Mar 11 10:45 ATLAS.root_0
[2026-03-11 12:50:53] -rw-r--r-- 2 boinc boinc    597957 Mar 11 10:45 input.tar.gz
[2026-03-11 12:50:53] -rw-r--r-- 2 boinc boinc     15845 Mar 11 10:45 start_atlas.sh
[2026-03-11 12:50:53] -rw------- 1 boinc boinc 233468227 Mar 11 12:49 HITS.pool.root.1
[2026-03-11 12:50:53] -rw------- 1 boinc boinc   1392640 Mar 11 12:50 result.tar.gz
12:50:55 (3068281): run_atlas exited; CPU time 21727.474825
12:50:55 (3068281): called boinc_finish(0)

</stderr_txt>
]]>

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