Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:04:59 (277661): wrapper (7.7.26015): starting
19:04:59 (277661): wrapper: running run_atlas (--nthreads 8)
[2026-03-10 19:04:59] Arguments: --nthreads 8
[2026-03-10 19:04:59] Threads: 8
[2026-03-10 19:04:59] Checking for CVMFS
[2026-03-10 19:05:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-10 19:05:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-10 19:05:01] Running cvmfs_config stat atlas.cern.ch
[2026-03-10 19:05:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-10 19:05:03] 2.13.3.0 15794 39105 237572 157133 1 318 24815767 32935937 36602 16776704 0 43078033 99.637 35730324 12287 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-10 19:05:03] CVMFS is ok
[2026-03-10 19:05:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 19:05:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 19:05:04] Further information can be found at the LHC@home message board.
[2026-03-10 19:05:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 19:05:04] Checking for apptainer binary...
[2026-03-10 19:05:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-10 19:05:04] Running /usr/bin/apptainer --version
[2026-03-10 19:05:04] apptainer version 1.4.5-2.el9
[2026-03-10 19:05:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 19:05:05] c6-12-25-1.aglt2.org
[2026-03-10 19:05:05] apptainer works
[2026-03-10 19:05:05] Set ATHENA_PROC_NUMBER=8
[2026-03-10 19:05:05] Set ATHENA_CORE_NUMBER=8
[2026-03-10 19:05:05] Starting ATLAS job with PandaID=7036056750
[2026-03-10 19:05:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 14:06:53]  *** The last 200 lines of the pilot log: ***
[2026-03-11 14:06:53] 2026-03-11 18:04:34,025 | INFO     | mean x: 1773218187.4278028
[2026-03-11 14:06:53] 2026-03-11 18:04:34,026 | INFO     | mean y: 2512462.1605381165
[2026-03-11 14:06:53] 2026-03-11 18:04:34,026 | INFO     | intersect: -2854874789.8496084
[2026-03-11 14:06:53] 2026-03-11 18:04:34,061 | INFO     | chi2: 8.050546499086165
[2026-03-11 14:06:53] 2026-03-11 18:04:34,088 | INFO     | sum of square deviations: 424079344244.7957
[2026-03-11 14:06:53] 2026-03-11 18:04:35,489 | INFO     | sum of deviations: 972444442024.014
[2026-03-11 14:06:53] 2026-03-11 18:04:35,681 | INFO     | mean x: 1773218034.9315314
[2026-03-11 14:06:53] 2026-03-11 18:04:35,681 | INFO     | mean y: 2519867.5396396397
[2026-03-11 14:06:53] 2026-03-11 18:04:35,681 | INFO     | intersect: -4063596641.0034976
[2026-03-11 14:06:53] 2026-03-11 18:04:35,846 | INFO     | chi2: 5.267891835308307
[2026-03-11 14:06:53] 2026-03-11 18:04:35,847 | INFO     | current chi2=5.267891835308307 (change=34.56479214291506 %)
[2026-03-11 14:06:53] 2026-03-11 18:04:35,957 | INFO     | sum of square deviations: 418374597979.62335
[2026-03-11 14:06:53] 2026-03-11 18:04:37,057 | INFO     | number of running child processes to parent process 304275: 1
[2026-03-11 14:06:53] 2026-03-11 18:04:37,057 | INFO     | maximum number of monitored processes: 7
[2026-03-11 14:06:53] 2026-03-11 18:04:37,843 | INFO     | sum of deviations: 966044437508.1776
[2026-03-11 14:06:53] 2026-03-11 18:04:37,843 | INFO     | mean x: 1773217882.4352942
[2026-03-11 14:06:53] 2026-03-11 18:04:37,844 | INFO     | mean y: 2519696.4570135744
[2026-03-11 14:06:53] 2026-03-11 18:04:37,869 | INFO     | intersect: -4091914526.100821
[2026-03-11 14:06:53] 2026-03-11 18:04:37,887 | INFO     | chi2: 5.268040832391439
[2026-03-11 14:06:53] 2026-03-11 18:04:37,894 | INFO     | current chi2=5.268040832391439 (change=-0.002828400578275016 %)
[2026-03-11 14:06:53] 2026-03-11 18:04:37,895 | INFO     | right removable region: 1104
[2026-03-11 14:06:53] 2026-03-11 18:04:37,927 | INFO     | sum of square deviations: 424078847893.6577
[2026-03-11 14:06:53] 2026-03-11 18:04:38,380 | INFO     | sum of deviations: 350129138183.2658
[2026-03-11 14:06:53] 2026-03-11 18:04:38,381 | INFO     | mean x: 1773218339.9306307
[2026-03-11 14:06:53] 2026-03-11 18:04:38,381 | INFO     | mean y: 2521531.9774774774
[2026-03-11 14:06:53] 2026-03-11 18:04:38,382 | INFO     | intersect: -1461487843.2940736
[2026-03-11 14:06:53] 2026-03-11 18:04:38,406 | INFO     | chi2: 4.720691438690246
[2026-03-11 14:06:53] 2026-03-11 18:04:38,407 | INFO     | current chi2=4.720691438690246 (change=41.36185115847598 %)
[2026-03-11 14:06:53] 2026-03-11 18:04:38,431 | INFO     | sum of square deviations: 418373538659.491
[2026-03-11 14:06:53] 2026-03-11 18:04:38,807 | INFO     | sum of deviations: 138946110654.49786
[2026-03-11 14:06:53] 2026-03-11 18:04:38,838 | INFO     | mean x: 1773218492.434389
[2026-03-11 14:06:53] 2026-03-11 18:04:38,839 | INFO     | mean y: 2527172.54479638
[2026-03-11 14:06:53] 2026-03-11 18:04:38,839 | INFO     | intersect: -586376737.7116255
[2026-03-11 14:06:53] 2026-03-11 18:04:38,847 | INFO     | chi2: 3.4009512849936034
[2026-03-11 14:06:53] 2026-03-11 18:04:38,848 | INFO     | current chi2=3.4009512849936034 (change=27.95650109389069 %)
[2026-03-11 14:06:53] 2026-03-11 18:04:38,875 | INFO     | sum of square deviations: 412719760793.5455
[2026-03-11 14:06:53] 2026-03-11 18:04:39,855 | INFO     | sum of deviations: 34022891988.245377
[2026-03-11 14:06:53] 2026-03-11 18:04:39,856 | INFO     | mean x: 1773218644.9363637
[2026-03-11 14:06:53] 2026-03-11 18:04:39,856 | INFO     | mean y: 2530002.1463636365
[2026-03-11 14:06:53] 2026-03-11 18:04:39,856 | INFO     | intersect: -143646731.21918893
[2026-03-11 14:06:53] 2026-03-11 18:04:39,870 | INFO     | chi2: 3.10826280274396
[2026-03-11 14:06:53] 2026-03-11 18:04:39,871 | INFO     | current chi2=3.10826280274396 (change=8.606076880345373 %)
[2026-03-11 14:06:53] 2026-03-11 18:04:39,891 | INFO     | left removable region: 30
[2026-03-11 14:06:53] 2026-03-11 18:04:39,895 | INFO     | sum of square deviations: 384139675261.8547
[2026-03-11 14:06:53] 2026-03-11 18:04:40,085 | INFO     | monitor loop #1773: job 0:7036056750 is in state 'finished'
[2026-03-11 14:06:53] 2026-03-11 18:04:40,085 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-11 14:06:53] 2026-03-11 18:04:40,929 | INFO     | sum of deviations: 159974073635.3631
[2026-03-11 14:06:53] 2026-03-11 18:04:40,930 | INFO     | mean x: 1773218766.9553072
[2026-03-11 14:06:53] 2026-03-11 18:04:40,930 | INFO     | mean y: 2541637.77839851
[2026-03-11 14:06:53] 2026-03-11 18:04:40,930 | INFO     | intersect: -735911190.3580047
[2026-03-11 14:06:53] 2026-03-11 18:04:40,985 | INFO     | chi2: 0.02965867976962081
[2026-03-11 14:06:53] 2026-03-11 18:04:40,986 | INFO     | current memory leak: 0.42 B/s (using 1074 data points, chi2=0.03)
[2026-03-11 14:06:53] 2026-03-11 18:04:40,988 | INFO     | could have reported an average CPU frequency of 999 MHz (41 samples)
[2026-03-11 14:06:53] 2026-03-11 18:04:40,989 | INFO     | ..............................
[2026-03-11 14:06:53] 2026-03-11 18:04:40,989 | INFO     | . Timing measurements:
[2026-03-11 14:06:53] 2026-03-11 18:04:40,990 | INFO     | . get job = 1 s
[2026-03-11 14:06:53] 2026-03-11 18:04:40,990 | INFO     | . initial setup = 64 s
[2026-03-11 14:06:53] 2026-03-11 18:04:40,991 | INFO     | . payload setup = 77 s
[2026-03-11 14:06:53] 2026-03-11 18:04:40,991 | INFO     | . stage-in = 1 s
[2026-03-11 14:06:53] 2026-03-11 18:04:40,991 | INFO     | . payload execution = 68060 s
[2026-03-11 14:06:53] 2026-03-11 18:04:41,017 | INFO     | . stage-out = 24 s
[2026-03-11 14:06:53] 2026-03-11 18:04:41,017 | INFO     | . log creation = 5 s
[2026-03-11 14:06:53] 2026-03-11 18:04:41,017 | INFO     | ..............................
[2026-03-11 14:06:53] 2026-03-11 18:04:44,809 | INFO     | 
[2026-03-11 14:06:53] 2026-03-11 18:04:44,810 | INFO     | job summary report
[2026-03-11 14:06:53] 2026-03-11 18:04:44,810 | INFO     | --------------------------------------------------
[2026-03-11 14:06:53] 2026-03-11 18:04:44,810 | INFO     | PanDA job id: 7036056750
[2026-03-11 14:06:53] 2026-03-11 18:04:44,810 | INFO     | task id: 48838586
[2026-03-11 14:06:53] 2026-03-11 18:04:44,810 | INFO     | errors: (none)
[2026-03-11 14:06:53] 2026-03-11 18:04:44,811 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-11 14:06:53] 2026-03-11 18:04:44,811 | INFO     | pilot state: finished 
[2026-03-11 14:06:53] 2026-03-11 18:04:44,811 | INFO     | transexitcode: 0
[2026-03-11 14:06:53] 2026-03-11 18:04:44,811 | INFO     | exeerrorcode: 0
[2026-03-11 14:06:53] 2026-03-11 18:04:44,811 | INFO     | exeerrordiag: 
[2026-03-11 14:06:53] 2026-03-11 18:04:44,811 | INFO     | exitcode: 0
[2026-03-11 14:06:53] 2026-03-11 18:04:44,812 | INFO     | exitmsg: OK
[2026-03-11 14:06:53] 2026-03-11 18:04:44,812 | INFO     | cpuconsumptiontime: 127204 s
[2026-03-11 14:06:53] 2026-03-11 18:04:44,812 | INFO     | nevents: 400
[2026-03-11 14:06:53] 2026-03-11 18:04:44,812 | INFO     | neventsw: 0
[2026-03-11 14:06:53] 2026-03-11 18:04:44,812 | INFO     | pid: 304275
[2026-03-11 14:06:53] 2026-03-11 18:04:44,813 | INFO     | pgrp: 304275
[2026-03-11 14:06:53] 2026-03-11 18:04:44,813 | INFO     | corecount: 8
[2026-03-11 14:06:53] 2026-03-11 18:04:44,813 | INFO     | event service: False
[2026-03-11 14:06:53] 2026-03-11 18:04:44,826 | INFO     | sizes: {0: 2279093, 2: 2279694, 3: 2279778, 5: 2279862, 7: 2279862, 8: 2280451, 9: 2280451, 68150: 2328953, 68156: 2328952, 68183: 2338034, 68188: 2338090, 68204: 
[2026-03-11 14:06:53] 2026-03-11 18:04:44,826 | INFO     | --------------------------------------------------
[2026-03-11 14:06:53] 2026-03-11 18:04:44,826 | INFO     | 
[2026-03-11 14:06:53] 2026-03-11 18:04:44,826 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-11 14:06:53] 2026-03-11 18:04:45,239 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-11 14:06:53] 2026-03-11 18:04:45,240 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-11 14:06:53] 2026-03-11 18:04:45,240 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-11 14:06:53] 2026-03-11 18:04:45,240 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-11 14:06:53] 2026-03-11 18:04:45,240 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-11 14:06:53] 2026-03-11 18:04:45,240 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-11 14:06:53] 2026-03-11 18:04:45,240 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-11 14:06:53] 2026-03-11 18:04:45,241 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-11 14:06:53] 2026-03-11 18:04:45,241 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-11 14:06:53] 2026-03-11 18:04:45,241 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-11 14:06:53] 2026-03-11 18:04:45,241 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-11 14:06:53] 2026-03-11 18:04:45,241 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-11 14:06:53] 2026-03-11 18:04:45,242 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-11 14:06:53] 2026-03-11 18:04:45,242 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-11 14:06:53] 2026-03-11 18:04:45,242 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-11 14:06:53] 2026-03-11 18:04:45,369 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-11 14:06:53] 2026-03-11 18:04:45,370 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-11 14:06:53] 2026-03-11 18:04:45,370 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-11 14:06:53] 2026-03-11 18:04:45,370 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-11 14:06:53] 2026-03-11 18:04:45,371 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-11 14:06:53] 2026-03-11 18:04:45,371 | INFO     | job 7036056750 has completed (purged errors)
[2026-03-11 14:06:53] 2026-03-11 18:04:45,371 | INFO     | overall cleanup function is called
[2026-03-11 14:06:53] 2026-03-11 18:04:46,913 | INFO     | --- collectZombieJob: --- 10, [304275]
[2026-03-11 14:06:53] 2026-03-11 18:04:46,913 | INFO     | zombie collector waiting for pid 304275
[2026-03-11 14:06:53] 2026-03-11 18:04:47,071 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-11 14:06:53] 2026-03-11 18:04:47,071 | INFO     | collected zombie processes
[2026-03-11 14:06:53] 2026-03-11 18:04:47,071 | INFO     | will attempt to kill all subprocesses of pid=304275
[2026-03-11 14:06:53] 2026-03-11 18:05:17,309 | INFO     | PID=286069 has CPU usage=14.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-11 14:06:53] 2026-03-11 18:05:17,310 | INFO     | .. there are 71 such processes running
[2026-03-11 14:06:53] 2026-03-11 18:05:19,376 | INFO     | process IDs to be killed: [304275] (in reverse order)
[2026-03-11 14:06:53] 2026-03-11 18:05:28,568 | WARNING  | found no corresponding commands to process id(s)
[2026-03-11 14:06:53] 2026-03-11 18:05:28,569 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-11 14:06:53] 2026-03-11 18:05:28,728 | INFO     | did not find any defunct processes belonging to 304275
[2026-03-11 14:06:53] 2026-03-11 18:05:29,140 | INFO     | did not find any defunct processes belonging to 304275
[2026-03-11 14:06:53] 2026-03-11 18:05:29,141 | INFO     | ready for new job
[2026-03-11 14:06:53] 2026-03-11 18:05:29,141 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-11 14:06:53] 2026-03-11 18:05:29,208 | INFO     | **************************************
[2026-03-11 14:06:53] 2026-03-11 18:05:29,208 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-11 14:06:53] 2026-03-11 18:05:29,208 | INFO     | **************************************
[2026-03-11 14:06:53] 2026-03-11 18:05:29,209 | INFO     | 
[2026-03-11 14:06:53] 2026-03-11 18:05:29,312 | INFO     | architecture information:
[2026-03-11 14:06:53] 2026-03-11 18:05:29,330 | INFO     | executing command: cat /etc/os-release
[2026-03-11 14:06:53] 2026-03-11 18:05:29,549 | INFO     | cat /etc/os-release:
[2026-03-11 14:06:53] NAME="CentOS Linux"
[2026-03-11 14:06:53] VERSION="7 (Core)"
[2026-03-11 14:06:53] ID="centos"
[2026-03-11 14:06:53] ID_LIKE="rhel fedora"
[2026-03-11 14:06:53] VERSION_ID="7"
[2026-03-11 14:06:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-11 14:06:53] ANSI_COLOR="0;31"
[2026-03-11 14:06:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-11 14:06:53] HOME_URL="https://www.centos.org/"
[2026-03-11 14:06:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-11 14:06:53] 
[2026-03-11 14:06:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-11 14:06:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-11 14:06:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-11 14:06:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-11 14:06:53] 
[2026-03-11 14:06:53] 2026-03-11 18:05:29,549 | INFO     | **************************************
[2026-03-11 14:06:53] 2026-03-11 18:05:30,054 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-11 14:06:53] 2026-03-11 18:05:30,258 | INFO     | sufficient remaining disk space (70771539968 B)
[2026-03-11 14:06:53] 2026-03-11 18:05:30,259 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-11 14:06:53] 2026-03-11 18:05:30,259 | INFO     | current server update state: UPDATING_FINAL
[2026-03-11 14:06:53] 2026-03-11 18:05:30,260 | INFO     | update_server=False
[2026-03-11 14:06:53] 2026-03-11 18:05:30,260 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-11 14:06:53] 2026-03-11 18:05:30,263 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-11 14:06:53] 2026-03-11 18:05:30,264 | INFO     | aborting loop
[2026-03-11 14:06:53] 2026-03-11 18:05:30,317 | INFO     | all job control threads have been joined
[2026-03-11 14:06:53] 2026-03-11 18:05:30,551 | INFO     | all data control threads have been joined
[2026-03-11 14:06:53] 2026-03-11 18:05:31,020 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 14:06:53] 2026-03-11 18:05:31,068 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 14:06:53] 2026-03-11 18:05:31,219 | INFO     | all payload control threads have been joined
[2026-03-11 14:06:53] 2026-03-11 18:05:31,267 | INFO     | [job] retrieve thread has finished
[2026-03-11 14:06:53] 2026-03-11 18:05:31,269 | INFO     | [job] job monitor thread has finished
[2026-03-11 14:06:53] 2026-03-11 18:05:31,348 | INFO     | [job] control thread has finished
[2026-03-11 14:06:53] 2026-03-11 18:05:31,553 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 14:06:53] 2026-03-11 18:05:31,560 | INFO     | [data] control thread has finished
[2026-03-11 14:06:53] 2026-03-11 18:05:32,116 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 14:06:53] 2026-03-11 18:05:32,175 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 14:06:53] 2026-03-11 18:05:32,176 | INFO     | [job] validate thread has finished
[2026-03-11 14:06:53] 2026-03-11 18:05:32,225 | INFO     | [payload] control thread has finished
[2026-03-11 14:06:53] 2026-03-11 18:05:32,581 | INFO     | [data] copytool_in thread has finished
[2026-03-11 14:06:53] 2026-03-11 18:05:32,585 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 14:06:53] 2026-03-11 18:05:32,590 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 14:06:53] 2026-03-11 18:05:32,635 | INFO     | [payload] validate_post thread has finished
[2026-03-11 14:06:53] 2026-03-11 18:05:32,677 | INFO     | [payload] failed_post thread has finished
[2026-03-11 14:06:53] 2026-03-11 18:05:33,093 | INFO     | [data] copytool_out thread has finished
[2026-03-11 14:06:53] 2026-03-11 18:05:33,122 | INFO     | [job] queue monitor thread has finished
[2026-03-11 14:06:53] 2026-03-11 18:05:35,057 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 14:06:53] 2026-03-11 18:06:12,325 | INFO     | PID=286069 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-11 14:06:53] 2026-03-11 18:06:12,325 | INFO     | .. there are 71 such processes running
[2026-03-11 14:06:53] 2026-03-11 18:06:12,326 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 14:06:53] 2026-03-11 18:06:12,326 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 14:06:53] 2026-03-11 18:06:12,326 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 14:06:53] 2026-03-11 18:06:19,579 | INFO     | [monitor] cgroup control has ended
[2026-03-11 14:06:53] 2026-03-11 18:06:20,220 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139883867088704)>', '<ExcThread(monitor, started 139883502880512)>']
[2026-03-11 14:06:53] 2026-03-11 18:06:20,448 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 14:06:53] 2026-03-11 18:06:20,449 | INFO     | [monitor] control thread has ended
[2026-03-11 14:06:53] 2026-03-11 18:06:25,289 | INFO     | all workflow threads have been joined
[2026-03-11 14:06:53] 2026-03-11 18:06:25,290 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 14:06:53] 2026-03-11 18:06:25,290 | INFO     | traces error code: 0
[2026-03-11 14:06:53] 2026-03-11 18:06:25,291 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 14:06:53] 2026-03-11 18:06:31,578 [wrapper] ==== pilot stdout END ====
[2026-03-11 14:06:53] 2026-03-11 18:06:31,604 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 14:06:53] 2026-03-11 18:06:31,618 [wrapper] pilotpid: 286069
[2026-03-11 14:06:53] 2026-03-11 18:06:31,645 [wrapper] Pilot exit status: 0
[2026-03-11 14:06:53] 2026-03-11 18:06:31,818 [wrapper] pandaids: 7036056750
[2026-03-11 14:06:53] 2026-03-11 18:06:35,640 [wrapper] cleanup supervisor_pilot 3881135 286070
[2026-03-11 14:06:53] 2026-03-11 18:06:35,688 [wrapper] Test setup, not cleaning
[2026-03-11 14:06:53] 2026-03-11 18:06:35,718 [wrapper] apfmon messages muted
[2026-03-11 14:06:53] 2026-03-11 18:06:35,789 [wrapper] ==== wrapper stdout END ====
[2026-03-11 14:06:53] 2026-03-11 18:06:35,843 [wrapper] ==== wrapper stderr END ====
[2026-03-11 14:06:53]  *** Error codes and diagnostics ***
[2026-03-11 14:06:53]     "exeErrorCode": 0,
[2026-03-11 14:06:53]     "exeErrorDiag": "",
[2026-03-11 14:06:53]     "pilotErrorCode": 0,
[2026-03-11 14:06:53]     "pilotErrorDiag": "",
[2026-03-11 14:06:53]  *** Listing of results directory ***
[2026-03-11 14:06:53] total 496692
[2026-03-11 14:06:53] -rw-r--r--. 1 boincer umatlas    584627 Mar  2 12:50 pilot3.tar.gz
[2026-03-11 14:06:53] -rwx------. 1 boincer umatlas     36322 Mar  2 13:04 runpilot2-wrapper.sh
[2026-03-11 14:06:53] -rw-r--r--. 1 boincer umatlas      5111 Mar  2 13:05 queuedata.json
[2026-03-11 14:06:53] -rw-r--r--. 1 boincer umatlas       100 Mar 10 19:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 14:06:53] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 10 19:04 run_atlas
[2026-03-11 14:06:53] -rw-r--r--. 1 boincer umatlas       105 Mar 10 19:04 job.xml
[2026-03-11 14:06:53] -rw-r--r--. 2 boincer umatlas 281294195 Mar 10 19:04 EVNT.48220221._000078.pool.root.1
[2026-03-11 14:06:53] -rw-r--r--. 2 boincer umatlas     15845 Mar 10 19:04 start_atlas.sh
[2026-03-11 14:06:53] drwxrwx--x. 2 boincer umatlas      4096 Mar 10 19:04 shared
[2026-03-11 14:06:53] -rw-r--r--. 2 boincer umatlas    597957 Mar 10 19:04 input.tar.gz
[2026-03-11 14:06:53] -rw-r--r--. 1 boincer umatlas         0 Mar 10 19:04 boinc_lockfile
[2026-03-11 14:06:53] -rw-r--r--. 1 boincer umatlas      2561 Mar 10 19:05 pandaJob.out
[2026-03-11 14:06:53] -rw-------. 1 boincer umatlas        57 Mar 10 19:05 setup.sh.local
[2026-03-11 14:06:53] -rw-------. 1 boincer umatlas       443 Mar 10 19:07 workernode_map.json
[2026-03-11 14:06:53] -rw-------. 1 boincer umatlas   1006644 Mar 10 19:07 agis_schedconf.cvmfs.json
[2026-03-11 14:06:53] drwx------. 5 boincer umatlas      4096 Mar 10 19:07 pilot3
[2026-03-11 14:06:53] -rw-------. 1 boincer umatlas 211735468 Mar 11 13:58 HITS.48838586._002008.pool.root.1
[2026-03-11 14:06:53] -rw-r--r--. 1 boincer umatlas       532 Mar 11 13:58 boinc_task_state.xml
[2026-03-11 14:06:53] -rw-------. 1 boincer umatlas      1043 Mar 11 14:03 memory_monitor_summary.json
[2026-03-11 14:06:53] -rw-r--r--. 1 boincer umatlas      6858 Mar 11 14:03 init_data.xml
[2026-03-11 14:06:53] -rw-------. 1 boincer umatlas   1511578 Mar 11 14:04 agis_ddmendpoints.agis.ALL.json
[2026-03-11 14:06:53] -rw-------. 1 boincer umatlas    883560 Mar 11 14:04 log.48838586._002008.job.log.tgz.1
[2026-03-11 14:06:53] -rw-------. 1 boincer umatlas      6402 Mar 11 14:04 heartbeat.json
[2026-03-11 14:06:53] -rw-------. 1 boincer umatlas        96 Mar 11 14:05 pilot_heartbeat.json
[2026-03-11 14:06:53] -rw-------. 1 boincer umatlas      4819 Mar 11 14:06 pilotlog.txt
[2026-03-11 14:06:53] -rw-------. 1 boincer umatlas   4939466 Mar 11 14:06 log.48838586._002008.job.log.1
[2026-03-11 14:06:53] -rw-------. 1 boincer umatlas       357 Mar 11 14:06 output.list
[2026-03-11 14:06:53] -rw-r--r--. 1 boincer umatlas       620 Mar 11 14:06 runtime_log
[2026-03-11 14:06:53] -rw-------. 1 boincer umatlas   5836800 Mar 11 14:06 result.tar.gz
[2026-03-11 14:06:53] -rw-------. 1 boincer umatlas       661 Mar 11 14:06 sYTKDmKoMH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmSNELDm5wJgfn.diag
[2026-03-11 14:06:53] -rw-r--r--. 1 boincer umatlas      9352 Mar 11 14:06 runtime_log.err
[2026-03-11 14:06:53] -rw-r--r--. 1 boincer umatlas        29 Mar 11 14:06 wrapper_checkpoint.txt
[2026-03-11 14:06:53] -rw-r--r--. 1 boincer umatlas      8192 Mar 11 14:06 boinc_mmap_file
[2026-03-11 14:06:53] -rw-r--r--. 1 boincer umatlas     21244 Mar 11 14:06 stderr.txt
[2026-03-11 14:06:53] HITS file was successfully produced:
[2026-03-11 14:06:53] -rw-------. 1 boincer umatlas 211735468 Mar 11 13:58 shared/HITS.pool.root.1
[2026-03-11 14:06:53]  *** Contents of shared directory: ***
[2026-03-11 14:06:53] total 487788
[2026-03-11 14:06:53] -rw-r--r--. 2 boincer umatlas 281294195 Mar 10 19:04 ATLAS.root_0
[2026-03-11 14:06:53] -rw-r--r--. 2 boincer umatlas     15845 Mar 10 19:04 start_atlas.sh
[2026-03-11 14:06:53] -rw-r--r--. 2 boincer umatlas    597957 Mar 10 19:04 input.tar.gz
[2026-03-11 14:06:53] -rw-------. 1 boincer umatlas 211735468 Mar 11 13:58 HITS.pool.root.1
[2026-03-11 14:06:53] -rw-------. 1 boincer umatlas   5836800 Mar 11 14:06 result.tar.gz
14:06:55 (277661): run_atlas exited; CPU time 133861.898901
14:06:55 (277661): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN