Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:40:44 (3991): wrapper (7.7.26015): starting
08:40:44 (3991): wrapper: running run_atlas (--nthreads 8)
[2026-03-11 08:40:44] Arguments: --nthreads 8
[2026-03-11 08:40:44] Threads: 8
[2026-03-11 08:40:44] Checking for CVMFS
[2026-03-11 08:40:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 08:40:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 08:40:47] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 08:40:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 08:40:48] 2.11.2.0 17161 103210 131816 157147 3 54 14024945 25165824 899 130560 155 23370402 99.825 13942600 577 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-11 08:40:48] CVMFS is ok
[2026-03-11 08:40:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 08:40:48] Checking for apptainer binary...
[2026-03-11 08:40:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 08:40:48] Running /usr/bin/apptainer --version
[2026-03-11 08:40:48] apptainer version 1.3.2-1.el7
[2026-03-11 08:40:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 08:41:12] cg-vwn491.simple-grid.lan
[2026-03-11 08:41:12] apptainer works
[2026-03-11 08:41:12] Set ATHENA_PROC_NUMBER=8
[2026-03-11 08:41:12] Set ATHENA_CORE_NUMBER=8
[2026-03-11 08:41:12] Starting ATLAS job with PandaID=7036047455
[2026-03-11 08:41:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 17:32:04]  *** The last 200 lines of the pilot log: ***
[2026-03-11 17:32:04] 2026-03-11 16:31:14,364 | INFO     | sum of square deviations: 36704650990.0
[2026-03-11 17:32:04] 2026-03-11 16:31:14,370 | INFO     | sum of deviations: 33580706668.000008
[2026-03-11 17:32:04] 2026-03-11 16:31:14,370 | INFO     | mean x: 1773231670.0
[2026-03-11 17:32:04] 2026-03-11 16:31:14,370 | INFO     | mean y: 2526484.9022403257
[2026-03-11 17:32:04] 2026-03-11 16:31:14,370 | INFO     | intersect: -1619784883.2374787
[2026-03-11 17:32:04] 2026-03-11 16:31:14,370 | INFO     | chi2: 0.040183305147510416
[2026-03-11 17:32:04] 2026-03-11 16:31:14,371 | INFO     | current chi2=0.040183305147510416 (change=27.036360343418202 %)
[2026-03-11 17:32:04] 2026-03-11 16:31:14,371 | INFO     | sum of square deviations: 35594704597.5
[2026-03-11 17:32:04] 2026-03-11 16:31:14,375 | INFO     | sum of deviations: 47399667621.5
[2026-03-11 17:32:04] 2026-03-11 16:31:14,375 | INFO     | mean x: 1773231822.5
[2026-03-11 17:32:04] 2026-03-11 16:31:14,375 | INFO     | mean y: 2524585.862139918
[2026-03-11 17:32:04] 2026-03-11 16:31:14,375 | INFO     | intersect: -2358798536.5741677
[2026-03-11 17:32:04] 2026-03-11 16:31:14,376 | INFO     | chi2: 0.0078049635338825335
[2026-03-11 17:32:04] 2026-03-11 16:31:14,376 | INFO     | current chi2=0.0078049635338825335 (change=80.57660138898231 %)
[2026-03-11 17:32:04] 2026-03-11 16:31:14,377 | INFO     | sum of square deviations: 34507363280.0
[2026-03-11 17:32:04] 2026-03-11 16:31:14,381 | INFO     | sum of deviations: 41288837650.99999
[2026-03-11 17:32:04] 2026-03-11 16:31:14,381 | INFO     | mean x: 1773231975.0
[2026-03-11 17:32:04] 2026-03-11 16:31:14,381 | INFO     | mean y: 2525442.027027027
[2026-03-11 17:32:04] 2026-03-11 16:31:14,381 | INFO     | intersect: -2119186568.8054934
[2026-03-11 17:32:04] 2026-03-11 16:31:14,382 | INFO     | chi2: 0.0043311150797850214
[2026-03-11 17:32:04] 2026-03-11 16:31:14,382 | INFO     | current chi2=0.0043311150797850214 (change=44.50819582970513 %)
[2026-03-11 17:32:04] 2026-03-11 16:31:14,383 | INFO     | sum of square deviations: 33442394475.0
[2026-03-11 17:32:04] 2026-03-11 16:31:14,388 | INFO     | sum of deviations: 36555491258.5
[2026-03-11 17:32:04] 2026-03-11 16:31:14,388 | INFO     | mean x: 1773232127.5
[2026-03-11 17:32:04] 2026-03-11 16:31:14,388 | INFO     | mean y: 2526119.6659663864
[2026-03-11 17:32:04] 2026-03-11 16:31:14,388 | INFO     | intersect: -1935773232.211337
[2026-03-11 17:32:04] 2026-03-11 16:31:14,389 | INFO     | chi2: 0.002481294157316258
[2026-03-11 17:32:04] 2026-03-11 16:31:14,389 | INFO     | current chi2=0.002481294157316258 (change=42.71003860189697 %)
[2026-03-11 17:32:04] 2026-03-11 16:31:14,389 | INFO     | sum of square deviations: 32399565620.0
[2026-03-11 17:32:04] 2026-03-11 16:31:14,394 | INFO     | sum of deviations: 32897111509.999996
[2026-03-11 17:32:04] 2026-03-11 16:31:14,394 | INFO     | mean x: 1773232280.0
[2026-03-11 17:32:04] 2026-03-11 16:31:14,394 | INFO     | mean y: 2526654.2653927812
[2026-03-11 17:32:04] 2026-03-11 16:31:14,395 | INFO     | intersect: -1797936374.543928
[2026-03-11 17:32:04] 2026-03-11 16:31:14,395 | INFO     | chi2: 0.0014537023703778387
[2026-03-11 17:32:04] 2026-03-11 16:31:14,395 | INFO     | current chi2=0.0014537023703778387 (change=41.41354155485748 %)
[2026-03-11 17:32:04] 2026-03-11 16:31:14,396 | INFO     | sum of square deviations: 31378644152.5
[2026-03-11 17:32:04] 2026-03-11 16:31:14,399 | INFO     | sum of deviations: 30576748278.499996
[2026-03-11 17:32:04] 2026-03-11 16:31:14,399 | INFO     | mean x: 1773232432.5
[2026-03-11 17:32:04] 2026-03-11 16:31:14,400 | INFO     | mean y: 2527000.736051502
[2026-03-11 17:32:04] 2026-03-11 16:31:14,400 | INFO     | intersect: -1725389650.6118348
[2026-03-11 17:32:04] 2026-03-11 16:31:14,402 | INFO     | chi2: 0.0011829999505392017
[2026-03-11 17:32:04] 2026-03-11 16:31:14,403 | INFO     | current chi2=0.0011829999505392017 (change=18.621584813697282 %)
[2026-03-11 17:32:04] 2026-03-11 16:31:14,403 | INFO     | left removable region: 90
[2026-03-11 17:32:04] 2026-03-11 16:31:14,403 | INFO     | sum of square deviations: 22162573680.0
[2026-03-11 17:32:04] 2026-03-11 16:31:14,408 | INFO     | sum of deviations: 18217275948.0
[2026-03-11 17:32:04] 2026-03-11 16:31:14,408 | INFO     | mean x: 1773233622.0
[2026-03-11 17:32:04] 2026-03-11 16:31:14,409 | INFO     | mean y: 2528724.16626506
[2026-03-11 17:32:04] 2026-03-11 16:31:14,409 | INFO     | intersect: -1455040540.0657544
[2026-03-11 17:32:04] 2026-03-11 16:31:14,410 | INFO     | chi2: 0.0007824195116691335
[2026-03-11 17:32:04] 2026-03-11 16:31:14,410 | INFO     | current memory leak: 0.82 B/s (using 415 data points, chi2=0.00)
[2026-03-11 17:32:04] 2026-03-11 16:31:14,410 | INFO     | could have reported an average CPU frequency of 2249 MHz (21 samples)
[2026-03-11 17:32:04] 2026-03-11 16:31:14,411 | INFO     | ..............................
[2026-03-11 17:32:04] 2026-03-11 16:31:14,411 | INFO     | . Timing measurements:
[2026-03-11 17:32:04] 2026-03-11 16:31:14,411 | INFO     | . get job = 0 s
[2026-03-11 17:32:04] 2026-03-11 16:31:14,411 | INFO     | . initial setup = 111 s
[2026-03-11 17:32:04] 2026-03-11 16:31:14,411 | INFO     | . payload setup = 146 s
[2026-03-11 17:32:04] 2026-03-11 16:31:14,411 | INFO     | . stage-in = 0 s
[2026-03-11 17:32:04] 2026-03-11 16:31:14,411 | INFO     | . payload execution = 31283 s
[2026-03-11 17:32:04] 2026-03-11 16:31:14,412 | INFO     | . stage-out = 1 s
[2026-03-11 17:32:04] 2026-03-11 16:31:14,412 | INFO     | . log creation = 0 s
[2026-03-11 17:32:04] 2026-03-11 16:31:14,412 | INFO     | ..............................
[2026-03-11 17:32:04] 2026-03-11 16:31:14,528 | INFO     | 
[2026-03-11 17:32:04] 2026-03-11 16:31:14,530 | INFO     | job summary report
[2026-03-11 17:32:04] 2026-03-11 16:31:14,530 | INFO     | --------------------------------------------------
[2026-03-11 17:32:04] 2026-03-11 16:31:14,531 | INFO     | PanDA job id: 7036047455
[2026-03-11 17:32:04] 2026-03-11 16:31:14,531 | INFO     | task id: 48850057
[2026-03-11 17:32:04] 2026-03-11 16:31:14,531 | INFO     | errors: (none)
[2026-03-11 17:32:04] 2026-03-11 16:31:14,531 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-11 17:32:04] 2026-03-11 16:31:14,531 | INFO     | pilot state: finished 
[2026-03-11 17:32:04] 2026-03-11 16:31:14,532 | INFO     | transexitcode: 0
[2026-03-11 17:32:04] 2026-03-11 16:31:14,532 | INFO     | exeerrorcode: 0
[2026-03-11 17:32:04] 2026-03-11 16:31:14,532 | INFO     | exeerrordiag: 
[2026-03-11 17:32:04] 2026-03-11 16:31:14,533 | INFO     | exitcode: 0
[2026-03-11 17:32:04] 2026-03-11 16:31:14,533 | INFO     | exitmsg: OK
[2026-03-11 17:32:04] 2026-03-11 16:31:14,533 | INFO     | cpuconsumptiontime: 136711 s
[2026-03-11 17:32:04] 2026-03-11 16:31:14,539 | INFO     | nevents: 400
[2026-03-11 17:32:04] 2026-03-11 16:31:14,540 | INFO     | neventsw: 0
[2026-03-11 17:32:04] 2026-03-11 16:31:14,540 | INFO     | pid: 12434
[2026-03-11 17:32:04] 2026-03-11 16:31:14,540 | INFO     | pgrp: 12434
[2026-03-11 17:32:04] 2026-03-11 16:31:14,540 | INFO     | corecount: 8
[2026-03-11 17:32:04] 2026-03-11 16:31:14,540 | INFO     | event service: False
[2026-03-11 17:32:04] 2026-03-11 16:31:14,540 | INFO     | sizes: {0: 2279809, 1: 2280326, 12: 2280326, 31433: 2318772, 31434: 2318771, 31436: 2328009, 31439: 2328147}
[2026-03-11 17:32:04] 2026-03-11 16:31:14,540 | INFO     | --------------------------------------------------
[2026-03-11 17:32:04] 2026-03-11 16:31:14,540 | INFO     | 
[2026-03-11 17:32:04] 2026-03-11 16:31:14,541 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-03-11 17:32:04] 2026-03-11 16:31:14,634 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-11 17:32:04] 2026-03-11 16:31:14,635 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-11 17:32:04] 2026-03-11 16:31:14,635 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-11 17:32:04] 2026-03-11 16:31:14,635 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-11 17:32:04] 2026-03-11 16:31:14,635 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-11 17:32:04] 2026-03-11 16:31:14,635 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-11 17:32:04] 2026-03-11 16:31:14,635 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-11 17:32:04] 2026-03-11 16:31:14,637 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-11 17:32:04] 2026-03-11 16:31:14,637 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-11 17:32:04] 2026-03-11 16:31:14,638 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-11 17:32:04] 2026-03-11 16:31:14,638 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-11 17:32:04] 2026-03-11 16:31:14,638 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-11 17:32:04] 2026-03-11 16:31:14,638 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-11 17:32:04] 2026-03-11 16:31:14,638 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-11 17:32:04] 2026-03-11 16:31:14,638 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-11 17:32:04] 2026-03-11 16:31:14,638 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-11 17:32:04] 2026-03-11 16:31:14,639 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-11 17:32:04] 2026-03-11 16:31:14,639 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-11 17:32:04] 2026-03-11 16:31:14,639 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-11 17:32:04] 2026-03-11 16:31:14,639 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-11 17:32:04] 2026-03-11 16:31:14,639 | INFO     | job 7036047455 has completed (purged errors)
[2026-03-11 17:32:04] 2026-03-11 16:31:14,639 | INFO     | overall cleanup function is called
[2026-03-11 17:32:04] 2026-03-11 16:31:14,662 | INFO     | PID=7956 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-11 17:32:04] 2026-03-11 16:31:14,663 | INFO     | .. there are 9 such processes running
[2026-03-11 17:32:04] 2026-03-11 16:31:15,650 | INFO     | --- collectZombieJob: --- 10, [12434]
[2026-03-11 17:32:04] 2026-03-11 16:31:15,651 | INFO     | zombie collector waiting for pid 12434
[2026-03-11 17:32:04] 2026-03-11 16:31:15,651 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-11 17:32:04] 2026-03-11 16:31:15,651 | INFO     | collected zombie processes
[2026-03-11 17:32:04] 2026-03-11 16:31:15,651 | INFO     | will attempt to kill all subprocesses of pid=12434
[2026-03-11 17:32:04] 2026-03-11 16:31:15,739 | INFO     | process IDs to be killed: [12434] (in reverse order)
[2026-03-11 17:32:04] 2026-03-11 16:31:15,836 | WARNING  | found no corresponding commands to process id(s)
[2026-03-11 17:32:04] 2026-03-11 16:31:15,836 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-11 17:32:04] 2026-03-11 16:31:15,838 | INFO     | did not find any defunct processes belonging to 12434
[2026-03-11 17:32:04] 2026-03-11 16:31:15,840 | INFO     | did not find any defunct processes belonging to 12434
[2026-03-11 17:32:04] 2026-03-11 16:31:15,840 | INFO     | ready for new job
[2026-03-11 17:32:04] 2026-03-11 16:31:15,840 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-11 17:32:04] 2026-03-11 16:31:15,842 | INFO     | **************************************
[2026-03-11 17:32:04] 2026-03-11 16:31:15,843 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-11 17:32:04] 2026-03-11 16:31:15,843 | INFO     | **************************************
[2026-03-11 17:32:04] 2026-03-11 16:31:15,843 | INFO     | 
[2026-03-11 17:32:04] 2026-03-11 16:31:15,843 | INFO     | pilot is running in a VM
[2026-03-11 17:32:04] 2026-03-11 16:31:15,843 | INFO     | architecture information:
[2026-03-11 17:32:04] 2026-03-11 16:31:15,848 | INFO     | executing command: cat /etc/os-release
[2026-03-11 17:32:04] 2026-03-11 16:31:15,875 | INFO     | cat /etc/os-release:
[2026-03-11 17:32:04] NAME="CentOS Linux"
[2026-03-11 17:32:04] VERSION="7 (Core)"
[2026-03-11 17:32:04] ID="centos"
[2026-03-11 17:32:04] ID_LIKE="rhel fedora"
[2026-03-11 17:32:04] VERSION_ID="7"
[2026-03-11 17:32:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-11 17:32:04] ANSI_COLOR="0;31"
[2026-03-11 17:32:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-11 17:32:04] HOME_URL="https://www.centos.org/"
[2026-03-11 17:32:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-11 17:32:04] 
[2026-03-11 17:32:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-11 17:32:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-11 17:32:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-11 17:32:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-11 17:32:04] 
[2026-03-11 17:32:04] 2026-03-11 16:31:15,875 | INFO     | **************************************
[2026-03-11 17:32:04] 2026-03-11 16:31:16,379 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-03-11 17:32:04] 2026-03-11 16:31:16,420 | INFO     | sufficient remaining disk space (493491322880 B)
[2026-03-11 17:32:04] 2026-03-11 16:31:16,420 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-11 17:32:04] 2026-03-11 16:31:16,420 | INFO     | current server update state: UPDATING_FINAL
[2026-03-11 17:32:04] 2026-03-11 16:31:16,420 | INFO     | update_server=False
[2026-03-11 17:32:04] 2026-03-11 16:31:16,421 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-11 17:32:04] 2026-03-11 16:31:16,421 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 17:32:04] 2026-03-11 16:31:16,421 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-11 17:32:04] 2026-03-11 16:31:16,422 | INFO     | aborting loop
[2026-03-11 17:32:04] 2026-03-11 16:31:16,619 | INFO     | all data control threads have been joined
[2026-03-11 17:32:04] 2026-03-11 16:31:16,878 | INFO     | all job control threads have been joined
[2026-03-11 17:32:04] 2026-03-11 16:31:17,063 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 17:32:04] 2026-03-11 16:31:17,334 | INFO     | all payload control threads have been joined
[2026-03-11 17:32:04] 2026-03-11 16:31:17,426 | INFO     | [job] queue monitor thread has finished
[2026-03-11 17:32:04] 2026-03-11 16:31:17,426 | INFO     | [job] retrieve thread has finished
[2026-03-11 17:32:04] 2026-03-11 16:31:17,427 | INFO     | [job] job monitor thread has finished
[2026-03-11 17:32:04] 2026-03-11 16:31:17,469 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 17:32:04] 2026-03-11 16:31:17,624 | INFO     | [data] control thread has finished
[2026-03-11 17:32:04] 2026-03-11 16:31:17,678 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 17:32:04] 2026-03-11 16:31:17,785 | INFO     | [data] copytool_in thread has finished
[2026-03-11 17:32:04] 2026-03-11 16:31:17,884 | INFO     | [job] control thread has finished
[2026-03-11 17:32:04] 2026-03-11 16:31:17,973 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 17:32:04] 2026-03-11 16:31:18,305 | INFO     | [payload] failed_post thread has finished
[2026-03-11 17:32:04] 2026-03-11 16:31:18,339 | INFO     | [payload] control thread has finished
[2026-03-11 17:32:04] 2026-03-11 16:31:18,400 | INFO     | [payload] validate_post thread has finished
[2026-03-11 17:32:04] 2026-03-11 16:31:18,751 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 17:32:04] 2026-03-11 16:31:18,890 | INFO     | [job] validate thread has finished
[2026-03-11 17:32:04] 2026-03-11 16:31:19,070 | INFO     | [data] copytool_out thread has finished
[2026-03-11 17:32:04] 2026-03-11 16:31:21,685 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 17:32:04] 2026-03-11 16:31:27,014 | INFO     | job.realtimelogging is not enabled
[2026-03-11 17:32:04] 2026-03-11 16:31:28,020 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 17:32:04] 2026-03-11 16:31:46,815 | INFO     | PID=7956 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-11 17:32:04] 2026-03-11 16:31:46,815 | INFO     | .. there are 9 such processes running
[2026-03-11 17:32:04] 2026-03-11 16:31:46,817 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 17:32:04] 2026-03-11 16:31:46,817 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 17:32:04] 2026-03-11 16:31:46,817 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 17:32:04] 2026-03-11 16:31:57,218 | INFO     | [monitor] cgroup control has ended
[2026-03-11 17:32:04] 2026-03-11 16:31:58,965 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140220919035712)>', '<ExcThread(monitor, started 140220305483520)>']
[2026-03-11 17:32:04] 2026-03-11 16:31:59,864 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 17:32:04] 2026-03-11 16:31:59,864 | INFO     | [monitor] control thread has ended
[2026-03-11 17:32:04] 2026-03-11 16:32:03,991 | INFO     | all workflow threads have been joined
[2026-03-11 17:32:04] 2026-03-11 16:32:03,991 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 17:32:04] 2026-03-11 16:32:03,991 | INFO     | traces error code: 0
[2026-03-11 17:32:04] 2026-03-11 16:32:03,991 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 17:32:04] 2026-03-11 16:32:04,115 [wrapper] ==== pilot stdout END ====
[2026-03-11 17:32:04] 2026-03-11 16:32:04,122 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 17:32:04] 2026-03-11 16:32:04,133 [wrapper] pilotpid: 7956
[2026-03-11 17:32:04] 2026-03-11 16:32:04,141 [wrapper] Pilot exit status: 0
[2026-03-11 17:32:04] 2026-03-11 16:32:04,176 [wrapper] pandaids: 7036047455
[2026-03-11 17:32:04] 2026-03-11 16:32:04,247 [wrapper] cleanup supervisor_pilot 23275 7957
[2026-03-11 17:32:04] 2026-03-11 16:32:04,259 [wrapper] Test setup, not cleaning
[2026-03-11 17:32:04] 2026-03-11 16:32:04,265 [wrapper] apfmon messages muted
[2026-03-11 17:32:04] 2026-03-11 16:32:04,272 [wrapper] ==== wrapper stdout END ====
[2026-03-11 17:32:04] 2026-03-11 16:32:04,281 [wrapper] ==== wrapper stderr END ====
[2026-03-11 17:32:04]  *** Error codes and diagnostics ***
[2026-03-11 17:32:04]     "exeErrorCode": 0,
[2026-03-11 17:32:04]     "exeErrorDiag": "",
[2026-03-11 17:32:04]     "pilotErrorCode": 0,
[2026-03-11 17:32:04]     "pilotErrorDiag": "",
[2026-03-11 17:32:04]  *** Listing of results directory ***
[2026-03-11 17:32:04] total 527196
[2026-03-11 17:32:04] -rw-r--r--. 1 boinc boinc    584627 Mar  2 18:50 pilot3.tar.gz
[2026-03-11 17:32:04] -rwx------. 1 boinc boinc     36322 Mar  2 18:51 runpilot2-wrapper.sh
[2026-03-11 17:32:04] -rw-r--r--. 1 boinc boinc      5111 Mar  2 18:51 queuedata.json
[2026-03-11 17:32:04] -rw-r--r--. 1 boinc boinc       100 Mar 11 08:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 17:32:04] -rwxr-xr-x. 1 boinc boinc      7986 Mar 11 08:40 run_atlas
[2026-03-11 17:32:04] -rw-r--r--. 1 boinc boinc       105 Mar 11 08:40 job.xml
[2026-03-11 17:32:04] -rw-r--r--. 2 boinc boinc 263456844 Mar 11 08:40 EVNT.48458110._000002.pool.root.1
[2026-03-11 17:32:04] drwxrwx--x. 2 boinc boinc        68 Mar 11 08:40 shared
[2026-03-11 17:32:04] -rw-r--r--. 2 boinc boinc    597970 Mar 11 08:40 input.tar.gz
[2026-03-11 17:32:04] -rw-r--r--. 1 boinc boinc      6391 Mar 11 08:40 init_data.xml
[2026-03-11 17:32:04] -rw-r--r--. 2 boinc boinc     15845 Mar 11 08:40 start_atlas.sh
[2026-03-11 17:32:04] -rw-r--r--. 1 boinc boinc         0 Mar 11 08:40 boinc_lockfile
[2026-03-11 17:32:04] -rw-r--r--. 1 boinc boinc      2611 Mar 11 08:41 pandaJob.out
[2026-03-11 17:32:04] -rw-------. 1 boinc boinc       415 Mar 11 08:46 workernode_map.json
[2026-03-11 17:32:04] -rw-------. 1 boinc boinc   1006644 Mar 11 08:47 agis_schedconf.cvmfs.json
[2026-03-11 17:32:04] drwx------. 5 boinc boinc      4096 Mar 11 08:47 pilot3
[2026-03-11 17:32:04] -rw-------. 1 boinc boinc 262221097 Mar 11 17:30 HITS.48850057._000044.pool.root.1
[2026-03-11 17:32:04] -rw-r--r--. 1 boinc boinc       531 Mar 11 17:30 boinc_task_state.xml
[2026-03-11 17:32:04] -rw-------. 1 boinc boinc      1022 Mar 11 17:31 memory_monitor_summary.json
[2026-03-11 17:32:04] -rw-------. 1 boinc boinc   1511578 Mar 11 17:31 agis_ddmendpoints.agis.ALL.json
[2026-03-11 17:32:04] -rw-------. 1 boinc boinc    714149 Mar 11 17:31 log.48850057._000044.job.log.tgz.1
[2026-03-11 17:32:04] -rw-------. 1 boinc boinc      6319 Mar 11 17:31 heartbeat.json
[2026-03-11 17:32:04] -rw-------. 1 boinc boinc        95 Mar 11 17:31 pilot_heartbeat.json
[2026-03-11 17:32:04] -rw-r--r--. 1 boinc boinc        29 Mar 11 17:32 wrapper_checkpoint.txt
[2026-03-11 17:32:04] -rw-r--r--. 1 boinc boinc      8192 Mar 11 17:32 boinc_mmap_file
[2026-03-11 17:32:04] -rw-------. 1 boinc boinc      4951 Mar 11 17:32 pilotlog.txt
[2026-03-11 17:32:04] -rw-------. 1 boinc boinc   4412729 Mar 11 17:32 log.48850057._000044.job.log.1
[2026-03-11 17:32:04] -rw-------. 1 boinc boinc       357 Mar 11 17:32 output.list
[2026-03-11 17:32:04] -rw-r--r--. 1 boinc boinc       620 Mar 11 17:32 runtime_log
[2026-03-11 17:32:04] -rw-------. 1 boinc boinc   5140480 Mar 11 17:32 result.tar.gz
[2026-03-11 17:32:04] -rw-r--r--. 1 boinc boinc      8816 Mar 11 17:32 runtime_log.err
[2026-03-11 17:32:04] -rw-------. 1 boinc boinc       658 Mar 11 17:32 gx2MDmgbMH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmt6BLDmlc0PIo.diag
[2026-03-11 17:32:04] -rw-r--r--. 1 boinc boinc     20764 Mar 11 17:32 stderr.txt
[2026-03-11 17:32:04] HITS file was successfully produced:
[2026-03-11 17:32:04] -rw-------. 1 boinc boinc 262221097 Mar 11 17:30 shared/HITS.pool.root.1
[2026-03-11 17:32:04]  *** Contents of shared directory: ***
[2026-03-11 17:32:04] total 518980
[2026-03-11 17:32:04] -rw-r--r--. 2 boinc boinc 263456844 Mar 11 08:40 ATLAS.root_0
[2026-03-11 17:32:04] -rw-r--r--. 2 boinc boinc    597970 Mar 11 08:40 input.tar.gz
[2026-03-11 17:32:04] -rw-r--r--. 2 boinc boinc     15845 Mar 11 08:40 start_atlas.sh
[2026-03-11 17:32:04] -rw-------. 1 boinc boinc 262221097 Mar 11 17:30 HITS.pool.root.1
[2026-03-11 17:32:04] -rw-------. 1 boinc boinc   5140480 Mar 11 17:32 result.tar.gz
17:32:06 (3991): run_atlas exited; CPU time 137052.903831
17:32:06 (3991): called boinc_finish(0)

</stderr_txt>
]]>

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