Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:44:07 (2994767): wrapper (7.7.26015): starting
17:44:07 (2994767): wrapper: running run_atlas (--nthreads 8)
[2026-03-10 17:44:08] Arguments: --nthreads 8
[2026-03-10 17:44:08] Threads: 8
[2026-03-10 17:44:08] Checking for CVMFS
[2026-03-10 17:44:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-10 17:44:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-10 17:44:09] Running cvmfs_config stat atlas.cern.ch
[2026-03-10 17:44:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-10 17:44:10] 2.13.3.0 9735 180367 233788 157130 2 422 23517741 32935937 25235 16776704 0 727012986 99.682 583249330 32712 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-10 17:44:10] CVMFS is ok
[2026-03-10 17:44:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 17:44:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 17:44:10] Further information can be found at the LHC@home message board.
[2026-03-10 17:44:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 17:44:10] Checking for apptainer binary...
[2026-03-10 17:44:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-10 17:44:10] Running /usr/bin/apptainer --version
[2026-03-10 17:44:10] apptainer version 1.4.5-2.el9
[2026-03-10 17:44:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 17:44:11] c-8-15.aglt2.org
[2026-03-10 17:44:11] apptainer works
[2026-03-10 17:44:11] Set ATHENA_PROC_NUMBER=8
[2026-03-10 17:44:11] Set ATHENA_CORE_NUMBER=8
[2026-03-10 17:44:11] Starting ATLAS job with PandaID=7049146725
[2026-03-10 17:44:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 12:47:49]  *** The last 200 lines of the pilot log: ***
[2026-03-12 12:47:49] 2026-03-12 11:25:16,852 | INFO     | monitor loop #6818: job 0:7049146725 is in state 'finished'
[2026-03-12 12:47:49] 2026-03-12 11:25:16,852 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-12 12:47:49] 2026-03-12 11:25:17,680 | INFO     | sum of deviations: 1470477870802.1758
[2026-03-12 12:47:49] 2026-03-12 11:25:17,680 | INFO     | mean x: 1773246787.7051919
[2026-03-12 12:47:49] 2026-03-12 11:25:17,681 | INFO     | mean y: 2497502.73227991
[2026-03-12 12:47:49] 2026-03-12 11:25:17,733 | INFO     | intersect: -771300675.4302983
[2026-03-12 12:47:49] 2026-03-12 11:25:17,736 | INFO     | chi2: 4.5535377986275485
[2026-03-12 12:47:49] 2026-03-12 11:25:17,736 | INFO     | current chi2=4.5535377986275485 (change=43.647619242658116 %)
[2026-03-12 12:47:49] 2026-03-12 11:25:17,864 | INFO     | sum of square deviations: 3347000318449.424
[2026-03-12 12:47:49] 2026-03-12 11:25:19,635 | INFO     | monitor loop #6819: job 0:7049146725 is in state 'finished'
[2026-03-12 12:47:49] 2026-03-12 11:25:19,635 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-12 12:47:49] 2026-03-12 11:25:20,940 | INFO     | sum of deviations: 1774938721657.5173
[2026-03-12 12:47:49] 2026-03-12 11:25:20,940 | INFO     | mean x: 1773246635.2090497
[2026-03-12 12:47:49] 2026-03-12 11:25:20,940 | INFO     | mean y: 2499539.2542986427
[2026-03-12 12:47:49] 2026-03-12 11:25:20,940 | INFO     | intersect: -937866106.5247711
[2026-03-12 12:47:49] 2026-03-12 11:25:21,166 | INFO     | chi2: 2.8879369488957902
[2026-03-12 12:47:49] 2026-03-12 11:25:21,166 | INFO     | current chi2=2.8879369488957902 (change=36.57817115812184 %)
[2026-03-12 12:47:49] 2026-03-12 11:25:21,295 | INFO     | sum of square deviations: 3324334985581.4004
[2026-03-12 12:47:49] 2026-03-12 11:25:22,365 | INFO     | monitor loop #6820: job 0:7049146725 is in state 'finished'
[2026-03-12 12:47:49] 2026-03-12 11:25:22,365 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-12 12:47:49] 2026-03-12 11:25:23,622 | INFO     | sum of deviations: 1769866600090.3315
[2026-03-12 12:47:49] 2026-03-12 11:25:23,622 | INFO     | mean x: 1773246482.7106576
[2026-03-12 12:47:49] 2026-03-12 11:25:23,622 | INFO     | mean y: 2499505.130612245
[2026-03-12 12:47:49] 2026-03-12 11:25:23,622 | INFO     | intersect: -941571936.8538564
[2026-03-12 12:47:49] 2026-03-12 11:25:23,635 | INFO     | chi2: 2.8877899587319242
[2026-03-12 12:47:49] 2026-03-12 11:25:23,636 | INFO     | current chi2=2.8877899587319242 (change=0.005089798235456349 %)
[2026-03-12 12:47:49] 2026-03-12 11:25:23,636 | INFO     | right removable region: 2204
[2026-03-12 12:47:49] 2026-03-12 11:25:23,644 | INFO     | sum of square deviations: 3369764384637.305
[2026-03-12 12:47:49] 2026-03-12 11:25:24,155 | INFO     | PID=3001394 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 12:47:49] 2026-03-12 11:25:24,155 | INFO     | .. there are 45 such processes running
[2026-03-12 12:47:49] 2026-03-12 11:25:24,252 | INFO     | sum of deviations: 252823973338.11465
[2026-03-12 12:47:49] 2026-03-12 11:25:24,252 | INFO     | mean x: 1773247092.704289
[2026-03-12 12:47:49] 2026-03-12 11:25:24,252 | INFO     | mean y: 2496228.566591422
[2026-03-12 12:47:49] 2026-03-12 11:25:24,252 | INFO     | intersect: -130545528.8131347
[2026-03-12 12:47:49] 2026-03-12 11:25:24,255 | INFO     | chi2: 5.906346437322627
[2026-03-12 12:47:49] 2026-03-12 11:25:24,255 | INFO     | current chi2=5.906346437322627 (change=26.90591402994557 %)
[2026-03-12 12:47:49] 2026-03-12 11:25:24,262 | INFO     | sum of square deviations: 3346994900077.0894
[2026-03-12 12:47:49] 2026-03-12 11:25:25,100 | INFO     | monitor loop #6821: job 0:7049146725 is in state 'finished'
[2026-03-12 12:47:49] 2026-03-12 11:25:25,100 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-12 12:47:49] 2026-03-12 11:25:25,135 | INFO     | sum of deviations: 84036167884.86462
[2026-03-12 12:47:49] 2026-03-12 11:25:25,135 | INFO     | mean x: 1773247245.2072399
[2026-03-12 12:47:49] 2026-03-12 11:25:25,135 | INFO     | mean y: 2497358.858371041
[2026-03-12 12:47:49] 2026-03-12 11:25:25,136 | INFO     | intersect: -42025237.57467912
[2026-03-12 12:47:49] 2026-03-12 11:25:25,142 | INFO     | chi2: 5.710937918984298
[2026-03-12 12:47:49] 2026-03-12 11:25:25,143 | INFO     | current chi2=5.710937918984298 (change=3.3084499937817515 %)
[2026-03-12 12:47:49] 2026-03-12 11:25:25,143 | INFO     | left removable region: 20
[2026-03-12 12:47:49] 2026-03-12 11:25:25,155 | INFO     | sum of square deviations: 3230251984796.259
[2026-03-12 12:47:49] 2026-03-12 11:25:25,165 | INFO     | time since job start (135552s) is within the limit (349056.0s)
[2026-03-12 12:47:49] 2026-03-12 11:25:25,654 | INFO     | sum of deviations: 926012160666.0363
[2026-03-12 12:47:49] 2026-03-12 11:25:25,654 | INFO     | mean x: 1773247062.2261906
[2026-03-12 12:47:49] 2026-03-12 11:25:25,655 | INFO     | mean y: 2505213.8035714286
[2026-03-12 12:47:49] 2026-03-12 11:25:25,655 | INFO     | intersect: -505829229.210584
[2026-03-12 12:47:49] 2026-03-12 11:25:25,658 | INFO     | chi2: 0.4078305782501117
[2026-03-12 12:47:49] 2026-03-12 11:25:25,658 | INFO     | current memory leak: 0.29 B/s (using 2184 data points, chi2=0.41)
[2026-03-12 12:47:49] 2026-03-12 11:25:25,660 | INFO     | could have reported an average CPU frequency of 2600 MHz (78 samples)
[2026-03-12 12:47:49] 2026-03-12 11:25:25,660 | INFO     | ..............................
[2026-03-12 12:47:49] 2026-03-12 11:25:25,660 | INFO     | . Timing measurements:
[2026-03-12 12:47:49] 2026-03-12 11:25:25,660 | INFO     | . get job = 0 s
[2026-03-12 12:47:49] 2026-03-12 11:25:25,660 | INFO     | . initial setup = 42 s
[2026-03-12 12:47:49] 2026-03-12 11:25:25,660 | INFO     | . payload setup = 44 s
[2026-03-12 12:47:49] 2026-03-12 11:25:25,660 | INFO     | . stage-in = 0 s
[2026-03-12 12:47:49] 2026-03-12 11:25:25,661 | INFO     | . payload execution = 135454 s
[2026-03-12 12:47:49] 2026-03-12 11:25:25,661 | INFO     | . stage-out = 23 s
[2026-03-12 12:47:49] 2026-03-12 11:25:25,661 | INFO     | . log creation = 12 s
[2026-03-12 12:47:49] 2026-03-12 11:25:25,661 | INFO     | ..............................
[2026-03-12 12:47:49] 2026-03-12 11:25:25,810 | INFO     | 
[2026-03-12 12:47:49] 2026-03-12 11:25:25,810 | INFO     | job summary report
[2026-03-12 12:47:49] 2026-03-12 11:25:25,810 | INFO     | --------------------------------------------------
[2026-03-12 12:47:49] 2026-03-12 11:25:25,810 | INFO     | PanDA job id: 7049146725
[2026-03-12 12:47:49] 2026-03-12 11:25:25,810 | INFO     | task id: 48967030
[2026-03-12 12:47:49] 2026-03-12 11:25:25,811 | INFO     | errors: (none)
[2026-03-12 12:47:49] 2026-03-12 11:25:25,811 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 12:47:49] 2026-03-12 11:25:25,811 | INFO     | pilot state: finished 
[2026-03-12 12:47:49] 2026-03-12 11:25:25,811 | INFO     | transexitcode: 0
[2026-03-12 12:47:49] 2026-03-12 11:25:25,811 | INFO     | exeerrorcode: 0
[2026-03-12 12:47:49] 2026-03-12 11:25:25,811 | INFO     | exeerrordiag: 
[2026-03-12 12:47:49] 2026-03-12 11:25:25,811 | INFO     | exitcode: 0
[2026-03-12 12:47:49] 2026-03-12 11:25:25,811 | INFO     | exitmsg: OK
[2026-03-12 12:47:49] 2026-03-12 11:25:25,811 | INFO     | cpuconsumptiontime: 59972 s
[2026-03-12 12:47:49] 2026-03-12 11:25:25,811 | INFO     | nevents: 400
[2026-03-12 12:47:49] 2026-03-12 11:25:25,812 | INFO     | neventsw: 0
[2026-03-12 12:47:49] 2026-03-12 11:25:25,812 | INFO     | pid: 3008329
[2026-03-12 12:47:49] 2026-03-12 11:25:25,812 | INFO     | pgrp: 3008329
[2026-03-12 12:47:49] 2026-03-12 11:25:25,812 | INFO     | corecount: 8
[2026-03-12 12:47:49] 2026-03-12 11:25:25,812 | INFO     | event service: False
[2026-03-12 12:47:49] 2026-03-12 11:25:25,812 | INFO     | sizes: {0: 2279753, 1: 2279809, 2: 2279865, 4: 2280326, 135506: 2365632, 135507: 2365631, 135531: 2374813, 135535: 2374869, 135548: 2375063}
[2026-03-12 12:47:49] 2026-03-12 11:25:25,812 | INFO     | --------------------------------------------------
[2026-03-12 12:47:49] 2026-03-12 11:25:25,812 | INFO     | 
[2026-03-12 12:47:49] 2026-03-12 11:25:25,812 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-12 12:47:49] 2026-03-12 11:25:25,984 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 12:47:49] 2026-03-12 11:25:25,984 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 12:47:49] 2026-03-12 11:25:25,985 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 12:47:49] 2026-03-12 11:25:25,985 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 12:47:49] 2026-03-12 11:25:25,985 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 12:47:49] 2026-03-12 11:25:25,985 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 12:47:49] 2026-03-12 11:25:25,985 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 12:47:49] 2026-03-12 11:25:25,985 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 12:47:49] 2026-03-12 11:25:25,985 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 12:47:49] 2026-03-12 11:25:25,985 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 12:47:49] 2026-03-12 11:25:25,986 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 12:47:49] 2026-03-12 11:25:25,986 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 12:47:49] 2026-03-12 11:25:25,986 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 12:47:49] 2026-03-12 11:25:25,986 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 12:47:49] 2026-03-12 11:25:25,986 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 12:47:49] 2026-03-12 11:25:25,986 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 12:47:49] 2026-03-12 11:25:25,986 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 12:47:49] 2026-03-12 11:25:25,986 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 12:47:49] 2026-03-12 11:25:25,986 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 12:47:49] 2026-03-12 11:25:25,987 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 12:47:49] 2026-03-12 11:25:25,988 | INFO     | job 7049146725 has completed (purged errors)
[2026-03-12 12:47:49] 2026-03-12 11:25:25,988 | INFO     | overall cleanup function is called
[2026-03-12 12:47:49] 2026-03-12 11:25:27,036 | INFO     | --- collectZombieJob: --- 10, [3008329]
[2026-03-12 12:47:49] 2026-03-12 11:25:27,036 | INFO     | zombie collector waiting for pid 3008329
[2026-03-12 12:47:49] 2026-03-12 11:25:27,036 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 12:47:49] 2026-03-12 11:25:27,037 | INFO     | collected zombie processes
[2026-03-12 12:47:49] 2026-03-12 11:25:27,037 | INFO     | will attempt to kill all subprocesses of pid=3008329
[2026-03-12 12:47:49] 2026-03-12 11:25:29,240 | INFO     | process IDs to be killed: [3008329] (in reverse order)
[2026-03-12 12:47:49] 2026-03-12 11:25:30,240 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 12:47:49] 2026-03-12 11:25:30,241 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 12:47:49] 2026-03-12 11:25:30,288 | INFO     | did not find any defunct processes belonging to 3008329
[2026-03-12 12:47:49] 2026-03-12 11:25:30,308 | INFO     | did not find any defunct processes belonging to 3008329
[2026-03-12 12:47:49] 2026-03-12 11:25:30,309 | INFO     | ready for new job
[2026-03-12 12:47:49] 2026-03-12 11:25:30,309 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 12:47:49] 2026-03-12 11:25:30,450 | INFO     | **************************************
[2026-03-12 12:47:49] 2026-03-12 11:25:30,451 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 12:47:49] 2026-03-12 11:25:30,451 | INFO     | **************************************
[2026-03-12 12:47:49] 2026-03-12 11:25:30,451 | INFO     | 
[2026-03-12 12:47:49] 2026-03-12 11:25:30,459 | INFO     | architecture information:
[2026-03-12 12:47:49] 2026-03-12 11:25:30,460 | INFO     | executing command: cat /etc/os-release
[2026-03-12 12:47:49] 2026-03-12 11:25:30,747 | INFO     | cat /etc/os-release:
[2026-03-12 12:47:49] NAME="CentOS Linux"
[2026-03-12 12:47:49] VERSION="7 (Core)"
[2026-03-12 12:47:49] ID="centos"
[2026-03-12 12:47:49] ID_LIKE="rhel fedora"
[2026-03-12 12:47:49] VERSION_ID="7"
[2026-03-12 12:47:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 12:47:49] ANSI_COLOR="0;31"
[2026-03-12 12:47:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 12:47:49] HOME_URL="https://www.centos.org/"
[2026-03-12 12:47:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 12:47:49] 
[2026-03-12 12:47:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 12:47:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 12:47:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 12:47:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 12:47:49] 
[2026-03-12 12:47:49] 2026-03-12 11:25:30,748 | INFO     | **************************************
[2026-03-12 12:47:49] 2026-03-12 11:25:31,270 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-12 12:47:49] 2026-03-12 11:25:31,545 | INFO     | sufficient remaining disk space (74080845824 B)
[2026-03-12 12:47:49] 2026-03-12 11:25:31,546 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 12:47:49] 2026-03-12 11:25:31,546 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 12:47:49] 2026-03-12 11:25:31,546 | INFO     | update_server=False
[2026-03-12 12:47:49] 2026-03-12 11:25:31,546 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 12:47:49] 2026-03-12 11:25:31,546 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 12:47:49] 2026-03-12 11:25:31,547 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 12:47:49] 2026-03-12 11:25:31,547 | INFO     | aborting loop
[2026-03-12 12:47:49] 2026-03-12 11:25:31,547 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 12:47:49] 2026-03-12 11:25:32,440 | INFO     | all job control threads have been joined
[2026-03-12 12:47:49] 2026-03-12 11:25:32,555 | INFO     | [payload] failed_post thread has finished
[2026-03-12 12:47:49] 2026-03-12 11:25:32,559 | INFO     | [job] retrieve thread has finished
[2026-03-12 12:47:49] 2026-03-12 11:25:32,627 | INFO     | [job] queue monitor thread has finished
[2026-03-12 12:47:49] 2026-03-12 11:25:32,640 | INFO     | [job] job monitor thread has finished
[2026-03-12 12:47:49] 2026-03-12 11:25:32,647 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 12:47:49] 2026-03-12 11:25:32,710 | INFO     | all data control threads have been joined
[2026-03-12 12:47:49] 2026-03-12 11:25:32,753 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 12:47:49] 2026-03-12 11:25:32,773 | INFO     | all payload control threads have been joined
[2026-03-12 12:47:49] 2026-03-12 11:25:32,844 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 12:47:49] 2026-03-12 11:25:33,446 | INFO     | [job] control thread has finished
[2026-03-12 12:47:49] 2026-03-12 11:25:33,573 | INFO     | [data] copytool_out thread has finished
[2026-03-12 12:47:49] 2026-03-12 11:25:33,709 | INFO     | [job] validate thread has finished
[2026-03-12 12:47:49] 2026-03-12 11:25:33,710 | INFO     | [data] copytool_in thread has finished
[2026-03-12 12:47:49] 2026-03-12 11:25:33,722 | INFO     | [data] control thread has finished
[2026-03-12 12:47:49] 2026-03-12 11:25:33,736 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 12:47:49] 2026-03-12 11:25:33,802 | INFO     | [payload] control thread has finished
[2026-03-12 12:47:49] 2026-03-12 11:25:33,838 | INFO     | [payload] validate_post thread has finished
[2026-03-12 12:47:49] 2026-03-12 11:25:34,189 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 12:47:49] 2026-03-12 11:25:37,823 | INFO     | [monitor] cgroup control has ended
[2026-03-12 12:47:49] 2026-03-12 11:25:38,253 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 12:47:49] 2026-03-12 11:25:39,977 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140679644129088)>', '<ExcThread(monitor, started 140679137179392)>']
[2026-03-12 12:47:49] 2026-03-12 11:25:45,003 | INFO     | all workflow threads have been joined
[2026-03-12 12:47:49] 2026-03-12 11:25:45,003 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 12:47:49] 2026-03-12 11:25:45,003 | INFO     | traces error code: 0
[2026-03-12 12:47:49] 2026-03-12 11:25:45,004 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 12:47:49] 2026-03-12 11:26:01,163 | INFO     | PID=3001394 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 12:47:49] 2026-03-12 11:26:01,163 | INFO     | .. there are 45 such processes running
[2026-03-12 12:47:49] 2026-03-12 11:26:01,163 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 12:47:49] 2026-03-12 11:26:01,163 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 12:47:49] 2026-03-12 11:26:01,163 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 12:47:49] 2026-03-12 11:26:01,163 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 12:47:49] 2026-03-12 11:26:01,164 | INFO     | [monitor] control thread has ended
[2026-03-12 12:47:49] 2026-03-12 11:26:02,613 [wrapper] ==== pilot stdout END ====
[2026-03-12 12:47:49] 2026-03-12 11:26:02,624 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 12:47:49] 2026-03-12 11:26:02,634 [wrapper] pilotpid: 3001394
[2026-03-12 12:47:49] 2026-03-12 11:26:02,666 [wrapper] Pilot exit status: 0
[2026-03-12 12:47:49] 2026-03-12 11:26:02,838 [wrapper] pandaids: 7049146725
[2026-03-12 12:47:49] 2026-03-12 11:26:03,209 [wrapper] cleanup supervisor_pilot 2013220 3001395
[2026-03-12 12:47:49] 2026-03-12 11:26:03,242 [wrapper] Test setup, not cleaning
[2026-03-12 12:47:49] 2026-03-12 11:26:03,292 [wrapper] apfmon messages muted
[2026-03-12 12:47:49] 2026-03-12 11:26:03,349 [wrapper] ==== wrapper stdout END ====
[2026-03-12 12:47:49] 2026-03-12 11:26:03,384 [wrapper] ==== wrapper stderr END ====
[2026-03-12 12:47:49]  *** Error codes and diagnostics ***
[2026-03-12 12:47:49]     "exeErrorCode": 0,
[2026-03-12 12:47:49]     "exeErrorDiag": "",
[2026-03-12 12:47:49]     "pilotErrorCode": 0,
[2026-03-12 12:47:49]     "pilotErrorDiag": "",
[2026-03-12 12:47:49]  *** Listing of results directory ***
[2026-03-12 12:47:49] total 440632
[2026-03-12 12:47:49] -rw-r--r--. 1 boincer umatlas    584627 Mar 10 12:46 pilot3.tar.gz
[2026-03-12 12:47:49] -rwx------. 1 boincer umatlas     36322 Mar 10 12:49 runpilot2-wrapper.sh
[2026-03-12 12:47:49] -rw-r--r--. 1 boincer umatlas      5111 Mar 10 12:50 queuedata.json
[2026-03-12 12:47:49] -rw-r--r--. 1 boincer umatlas       100 Mar 10 17:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 12:47:49] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 10 17:44 run_atlas
[2026-03-12 12:47:49] -rw-r--r--. 1 boincer umatlas       105 Mar 10 17:44 job.xml
[2026-03-12 12:47:49] -rw-r--r--. 2 boincer umatlas 213226717 Mar 10 17:44 EVNT.48967027._000117.pool.root.1
[2026-03-12 12:47:49] -rw-r--r--. 2 boincer umatlas     15845 Mar 10 17:44 start_atlas.sh
[2026-03-12 12:47:49] drwxrwx--x. 2 boincer umatlas      4096 Mar 10 17:44 shared
[2026-03-12 12:47:49] -rw-r--r--. 2 boincer umatlas    597944 Mar 10 17:44 input.tar.gz
[2026-03-12 12:47:49] -rw-r--r--. 1 boincer umatlas         0 Mar 10 17:44 boinc_lockfile
[2026-03-12 12:47:49] -rw-r--r--. 1 boincer umatlas      2565 Mar 10 17:44 pandaJob.out
[2026-03-12 12:47:49] -rw-------. 1 boincer umatlas        57 Mar 10 17:44 setup.sh.local
[2026-03-12 12:47:49] -rw-------. 1 boincer umatlas   1006644 Mar 10 17:45 agis_schedconf.cvmfs.json
[2026-03-12 12:47:49] -rw-------. 1 boincer umatlas       433 Mar 10 17:46 workernode_map.json
[2026-03-12 12:47:49] drwx------. 5 boincer umatlas      4096 Mar 10 17:46 pilot3
[2026-03-12 12:47:49] -rw-------. 1 boincer umatlas 200366171 Mar 12 07:17 HITS.48967030._002934.pool.root.1
[2026-03-12 12:47:49] -rw-r--r--. 1 boincer umatlas       531 Mar 12 07:17 boinc_task_state.xml
[2026-03-12 12:47:49] -rw-------. 1 boincer umatlas      1055 Mar 12 07:24 memory_monitor_summary.json
[2026-03-12 12:47:49] -rw-------. 1 boincer umatlas   1511578 Mar 12 07:24 agis_ddmendpoints.agis.ALL.json
[2026-03-12 12:47:49] -rw-------. 1 boincer umatlas        95 Mar 12 07:25 pilot_heartbeat.json
[2026-03-12 12:47:49] -rw-------. 1 boincer umatlas   1836624 Mar 12 07:25 log.48967030._002934.job.log.tgz.1
[2026-03-12 12:47:49] -rw-------. 1 boincer umatlas      6405 Mar 12 07:25 heartbeat.json
[2026-03-12 12:47:49] -rw-------. 1 boincer umatlas       823 Mar 12 07:26 pilotlog.txt
[2026-03-12 12:47:49] -rw-------. 1 boincer umatlas  15005071 Mar 12 07:26 log.48967030._002934.job.log.1
[2026-03-12 12:47:49] -rw-------. 1 boincer umatlas       357 Mar 12 07:26 output.list
[2026-03-12 12:47:49] -rw-r--r--. 1 boincer umatlas       620 Mar 12 07:26 runtime_log
[2026-03-12 12:47:49] -rw-------. 1 boincer umatlas  16855040 Mar 12 07:26 result.tar.gz
[2026-03-12 12:47:49] -rw-------. 1 boincer umatlas       662 Mar 12 07:26 vwmLDmRSFK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmIbgLDmm3tdsm.diag
[2026-03-12 12:47:49] -rw-r--r--. 1 boincer umatlas      9333 Mar 12 07:26 runtime_log.err
[2026-03-12 12:47:49] -rw-r--r--. 1 boincer umatlas      6660 Mar 12 12:47 init_data.xml
[2026-03-12 12:47:49] -rw-r--r--. 1 boincer umatlas      8192 Mar 12 12:47 boinc_mmap_file
[2026-03-12 12:47:49] -rw-r--r--. 1 boincer umatlas        28 Mar 12 12:47 wrapper_checkpoint.txt
[2026-03-12 12:47:49] -rw-r--r--. 1 boincer umatlas     21466 Mar 12 12:47 stderr.txt
[2026-03-12 12:47:49] HITS file was successfully produced:
[2026-03-12 12:47:50] -rw-------. 1 boincer umatlas 200366171 Mar 12 07:17 shared/HITS.pool.root.1
[2026-03-12 12:47:50]  *** Contents of shared directory: ***
[2026-03-12 12:47:50] total 420968
[2026-03-12 12:47:50] -rw-r--r--. 2 boincer umatlas 213226717 Mar 10 17:44 ATLAS.root_0
[2026-03-12 12:47:50] -rw-r--r--. 2 boincer umatlas     15845 Mar 10 17:44 start_atlas.sh
[2026-03-12 12:47:50] -rw-r--r--. 2 boincer umatlas    597944 Mar 10 17:44 input.tar.gz
[2026-03-12 12:47:50] -rw-------. 1 boincer umatlas 200366171 Mar 12 07:17 HITS.pool.root.1
[2026-03-12 12:47:50] -rw-------. 1 boincer umatlas  16855040 Mar 12 07:26 result.tar.gz
12:47:51 (2994767): run_atlas exited; CPU time 67258.801881
12:47:51 (2994767): called boinc_finish(0)

</stderr_txt>
]]>

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