Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:14:35 (275515): wrapper (7.7.26015): starting
10:14:35 (275515): wrapper: running run_atlas (--nthreads 2)
[2026-03-11 10:14:35] Arguments: --nthreads 2
[2026-03-11 10:14:35] Threads: 2
[2026-03-11 10:14:35] Checking for CVMFS
[2026-03-11 10:14:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 10:14:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 10:14:35] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 10:14:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 10:14:35] 2.9.2.0 2856 2511 56204 157148 2 50 27511099 36864001 0 130560 0 806388 99.977 96529 15879 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-11 10:14:35] CVMFS is ok
[2026-03-11 10:14:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 10:14:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-11 10:14:35] Further information can be found at the LHC@home message board.
[2026-03-11 10:14:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 10:14:35] Checking for apptainer binary...
[2026-03-11 10:14:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 10:14:35] Running /usr/bin/apptainer --version
[2026-03-11 10:14:35] apptainer version 1.4.1-1.1
[2026-03-11 10:14:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 10:14:35] thA337
[2026-03-11 10:14:35] apptainer works
[2026-03-11 10:14:35] Set ATHENA_PROC_NUMBER=2
[2026-03-11 10:14:35] Set ATHENA_CORE_NUMBER=2
[2026-03-11 10:14:35] Starting ATLAS job with PandaID=7049147247
[2026-03-11 10:14:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 12:38:29]  *** The last 200 lines of the pilot log: ***
[2026-03-11 12:38:29] 2026-03-11 11:37:59,855 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 12:38:29] 2026-03-11 11:37:59,865 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 12:38:29] 2026-03-11 11:37:59,886 | INFO     | [payload] control thread has finished
[2026-03-11 12:38:29] 2026-03-11 11:37:59,982 | INFO     | [job] job monitor thread has finished
[2026-03-11 12:38:29] 2026-03-11 11:38:00,113 | INFO     | [data] control thread has finished
[2026-03-11 12:38:29] 2026-03-11 11:38:00,220 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 12:38:29] 2026-03-11 11:38:00,275 | INFO     | [payload] validate_post thread has finished
[2026-03-11 12:38:29] 2026-03-11 11:38:00,417 | INFO     | [job] control thread has finished
[2026-03-11 12:38:29] 2026-03-11 11:38:00,504 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 12:38:29] 2026-03-11 11:38:00,927 | INFO     | [job] validate thread has finished
[2026-03-11 12:38:29] 2026-03-11 11:38:00,974 | INFO     | [payload] failed_post thread has finished
[2026-03-11 12:38:29] 2026-03-11 11:38:01,121 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 12:38:29] 2026-03-11 11:38:01,556 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 12:38:29] 2026-03-11 11:38:01,872 | INFO     | [data] copytool_out thread has finished
[2026-03-11 12:38:29] 2026-03-11 11:38:02,562 | INFO     | [job] queue monitor thread has finished
[2026-03-11 12:38:29] 2026-03-11 11:38:04,511 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 12:38:29] 2026-03-11 11:38:10,313 | INFO     | [monitor] cgroup control has ended
[2026-03-11 12:38:29] 2026-03-11 11:38:11,233 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140637843720000)>', '<ExcThread(monitor, started 140637185746688)>']
[2026-03-11 12:38:29] 2026-03-11 11:38:16,259 | INFO     | all workflow threads have been joined
[2026-03-11 12:38:29] 2026-03-11 11:38:16,259 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 12:38:29] 2026-03-11 11:38:16,259 | INFO     | traces error code: 0
[2026-03-11 12:38:29] 2026-03-11 11:38:16,260 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 12:38:29] 2026-03-11 11:38:29,599 | INFO     | PID=279539 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-11 12:38:29] 2026-03-11 11:38:29,599 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 12:38:29] 2026-03-11 11:38:29,599 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 12:38:29] 2026-03-11 11:38:29,599 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 12:38:29] 2026-03-11 11:38:29,599 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 12:38:29] 2026-03-11 11:38:29,599 | CRITICAL | thread 'MainThread' is not alive
[2026-03-11 12:38:29] 2026-03-11 11:38:29,599 | INFO     | [monitor] control thread has ended
[2026-03-11 12:38:29] 2026-03-11 11:38:29,637 [wrapper] ==== pilot stdout END ====
[2026-03-11 12:38:29] 2026-03-11 11:38:29,639 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 12:38:29] 2026-03-11 11:38:29,642 [wrapper] pilotpid: 279539
[2026-03-11 12:38:29] 2026-03-11 11:38:29,644 [wrapper] Pilot exit status: 0
[2026-03-11 12:38:29] 2026-03-11 11:38:29,650 [wrapper] pandaids: 7049147247
[2026-03-11 12:38:29] 2026-03-11 11:38:29,662 [wrapper] cleanup supervisor_pilot  289530 279540
[2026-03-11 12:38:29] 2026-03-11 11:38:29,665 [wrapper] Test setup, not cleaning
[2026-03-11 12:38:29] 2026-03-11 11:38:29,667 [wrapper] apfmon messages muted
[2026-03-11 12:38:29] 2026-03-11 11:38:29,669 [wrapper] ==== wrapper stdout END ====
[2026-03-11 12:38:29] 2026-03-11 11:38:29,671 [wrapper] ==== wrapper stderr END ====
[2026-03-11 12:38:29]  *** Error codes and diagnostics ***
[2026-03-11 12:38:29]     "exeErrorCode": 0,
[2026-03-11 12:38:29]     "exeErrorDiag": "",
[2026-03-11 12:38:29]     "pilotErrorCode": 0,
[2026-03-11 12:38:29]     "pilotErrorDiag": "",
[2026-03-11 12:38:29]  *** Listing of results directory ***
[2026-03-11 12:38:29] total 405188
[2026-03-11 12:38:29] -rw-r--r-- 1 boinc boinc    584627 Mar 10 17:46 pilot3.tar.gz
[2026-03-11 12:38:29] -rwx------ 1 boinc boinc     36322 Mar 10 17:50 runpilot2-wrapper.sh
[2026-03-11 12:38:29] -rw-r--r-- 1 boinc boinc      5111 Mar 10 17:50 queuedata.json
[2026-03-11 12:38:29] -rw-r--r-- 1 boinc boinc       100 Mar 11 10:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 12:38:29] -rwxr-xr-x 1 boinc boinc      7986 Mar 11 10:14 run_atlas
[2026-03-11 12:38:29] -rw-r--r-- 1 boinc boinc       105 Mar 11 10:14 job.xml
[2026-03-11 12:38:29] -rw-r--r-- 2 boinc boinc 212566413 Mar 11 10:14 EVNT.48967027._000134.pool.root.1
[2026-03-11 12:38:29] drwxrwx--x 2 boinc boinc      4096 Mar 11 10:14 shared
[2026-03-11 12:38:29] -rw-r--r-- 2 boinc boinc    597949 Mar 11 10:14 input.tar.gz
[2026-03-11 12:38:29] -rw-r--r-- 2 boinc boinc     15845 Mar 11 10:14 start_atlas.sh
[2026-03-11 12:38:29] -rw-r--r-- 1 boinc boinc         0 Mar 11 10:14 boinc_setup_complete
[2026-03-11 12:38:29] -rw-r--r-- 1 boinc boinc      6205 Mar 11 10:14 init_data.xml
[2026-03-11 12:38:29] -rw-r--r-- 1 boinc boinc         0 Mar 11 10:14 boinc_lockfile
[2026-03-11 12:38:29] -rw-r--r-- 1 boinc boinc      2565 Mar 11 10:14 pandaJob.out
[2026-03-11 12:38:29] -rw------- 1 boinc boinc   1006970 Mar 11 10:14 agis_schedconf.cvmfs.json
[2026-03-11 12:38:29] -rw------- 1 boinc boinc   1511578 Mar 11 10:14 agis_ddmendpoints.agis.ALL.json
[2026-03-11 12:38:29] -rw------- 1 boinc boinc       419 Mar 11 10:14 workernode_map.json
[2026-03-11 12:38:29] drwx------ 5 boinc boinc      4096 Mar 11 10:14 pilot3
[2026-03-11 12:38:29] -rw------- 1 boinc boinc        95 Mar 11 12:37 pilot_heartbeat.json
[2026-03-11 12:38:29] -rw------- 1 boinc boinc 195394000 Mar 11 12:37 HITS.48967030._003358.pool.root.1
[2026-03-11 12:38:29] -rw-r--r-- 1 boinc boinc       529 Mar 11 12:37 boinc_task_state.xml
[2026-03-11 12:38:29] -rw------- 1 boinc boinc      1016 Mar 11 12:37 memory_monitor_summary.json
[2026-03-11 12:38:29] -rw------- 1 boinc boinc    288263 Mar 11 12:37 log.48967030._003358.job.log.tgz.1
[2026-03-11 12:38:29] -rw------- 1 boinc boinc      6292 Mar 11 12:37 heartbeat.json
[2026-03-11 12:38:29] -rw-r--r-- 1 boinc boinc        27 Mar 11 12:38 wrapper_checkpoint.txt
[2026-03-11 12:38:29] -rw-r--r-- 1 boinc boinc      8192 Mar 11 12:38 boinc_mmap_file
[2026-03-11 12:38:29] -rw------- 1 boinc boinc       816 Mar 11 12:38 pilotlog.txt
[2026-03-11 12:38:29] -rw------- 1 boinc boinc   1224747 Mar 11 12:38 log.48967030._003358.job.log.1
[2026-03-11 12:38:29] -rw------- 1 boinc boinc       357 Mar 11 12:38 output.list
[2026-03-11 12:38:29] -rw-r--r-- 1 boinc boinc       620 Mar 11 12:38 runtime_log
[2026-03-11 12:38:29] -rw------- 1 boinc boinc   1536000 Mar 11 12:38 result.tar.gz
[2026-03-11 12:38:29] -rw-r--r-- 1 boinc boinc      8896 Mar 11 12:38 runtime_log.err
[2026-03-11 12:38:29] -rw------- 1 boinc boinc       657 Mar 11 12:38 D4wMDmZSFK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmwqdLDmfzb8Om.diag
[2026-03-11 12:38:29] -rw-r--r-- 1 boinc boinc      6477 Mar 11 12:38 stderr.txt
[2026-03-11 12:38:29] HITS file was successfully produced:
[2026-03-11 12:38:29] -rw------- 1 boinc boinc 195394000 Mar 11 12:37 shared/HITS.pool.root.1
[2026-03-11 12:38:29]  *** Contents of shared directory: ***
[2026-03-11 12:38:29] total 400512
[2026-03-11 12:38:29] -rw-r--r-- 2 boinc boinc 212566413 Mar 11 10:14 ATLAS.root_0
[2026-03-11 12:38:29] -rw-r--r-- 2 boinc boinc    597949 Mar 11 10:14 input.tar.gz
[2026-03-11 12:38:29] -rw-r--r-- 2 boinc boinc     15845 Mar 11 10:14 start_atlas.sh
[2026-03-11 12:38:29] -rw------- 1 boinc boinc 195394000 Mar 11 12:37 HITS.pool.root.1
[2026-03-11 12:38:29] -rw------- 1 boinc boinc   1536000 Mar 11 12:38 result.tar.gz
12:38:31 (275515): run_atlas exited; CPU time 16710.960574
12:38:31 (275515): called boinc_finish(0)

</stderr_txt>
]]>

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