Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:50:37 (16420): wrapper (7.7.26015): starting
05:50:37 (16420): wrapper: running run_atlas (--nthreads 8)
[2026-03-11 05:50:37] Arguments: --nthreads 8
[2026-03-11 05:50:37] Threads: 8
[2026-03-11 05:50:37] Checking for CVMFS
[2026-03-11 05:50:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 05:50:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 05:50:39] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 05:50:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 05:50:41] 2.11.2.0 20422 122797 134820 157142 3 56 21730458 25165824 899 130560 162 26871325 99.789 25433819 887 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-11 05:50:41] CVMFS is ok
[2026-03-11 05:50:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 05:50:41] Checking for apptainer binary...
[2026-03-11 05:50:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 05:50:41] Running /usr/bin/apptainer --version
[2026-03-11 05:50:41] apptainer version 1.3.2-1.el7
[2026-03-11 05:50:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 05:50:57] cg-vwn357.simple-grid.lan
[2026-03-11 05:50:57] apptainer works
[2026-03-11 05:50:57] Set ATHENA_PROC_NUMBER=8
[2026-03-11 05:50:57] Set ATHENA_CORE_NUMBER=8
[2026-03-11 05:50:57] Starting ATLAS job with PandaID=7036047732
[2026-03-11 05:50:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/20 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 10:14:07]  *** The last 200 lines of the pilot log: ***
[2026-03-11 10:14:07] 2026-03-11 09:13:08,235 | INFO     | job 7036047732 has finished - writing final server update
[2026-03-11 10:14:07] 2026-03-11 09:13:08,235 | INFO     | total number of processed events: 400 (read)
[2026-03-11 10:14:07] 2026-03-11 09:13:08,237 | INFO     | using path: /var/lib/boinc/slots/20/PanDA_Pilot-7036047732/memory_monitor_summary.json (trf name=prmon)
[2026-03-11 10:14:07] 2026-03-11 09:13:08,238 | INFO     | extracted standard info from prmon json
[2026-03-11 10:14:07] 2026-03-11 09:13:08,238 | INFO     | extracted standard memory fields from prmon json
[2026-03-11 10:14:07] 2026-03-11 09:13:08,238 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-11 10:14:07] 2026-03-11 09:13:08,238 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-11 10:14:07] 2026-03-11 09:13:08,238 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-11 10:14:07] 2026-03-11 09:13:08,243 | INFO     | fitting pss+swap vs Time
[2026-03-11 10:14:07] 2026-03-11 09:13:08,244 | INFO     | sum of square deviations: 4672638308.0
[2026-03-11 10:14:07] 2026-03-11 09:13:08,245 | INFO     | time since job start (15337s) is within the limit (349056.0s)
[2026-03-11 10:14:07] 2026-03-11 09:13:08,249 | INFO     | sum of deviations: 135130556769.00003
[2026-03-11 10:14:07] 2026-03-11 09:13:08,253 | INFO     | mean x: 1773212829.0
[2026-03-11 10:14:07] 2026-03-11 09:13:08,254 | INFO     | mean y: 2435110.7408906883
[2026-03-11 10:14:07] 2026-03-11 09:13:08,254 | INFO     | intersect: -51278066622.60741
[2026-03-11 10:14:07] 2026-03-11 09:13:08,254 | INFO     | chi2: 8.268393791325787
[2026-03-11 10:14:07] 2026-03-11 09:13:08,255 | INFO     | sum of square deviations: 4394577280.5
[2026-03-11 10:14:07] 2026-03-11 09:13:08,257 | INFO     | sum of deviations: 148473768382.99997
[2026-03-11 10:14:07] 2026-03-11 09:13:08,257 | INFO     | mean x: 1773212676.5
[2026-03-11 10:14:07] 2026-03-11 09:13:08,257 | INFO     | mean y: 2442279.3305785125
[2026-03-11 10:14:07] 2026-03-11 09:13:08,257 | INFO     | intersect: -59906748393.61302
[2026-03-11 10:14:07] 2026-03-11 09:13:08,258 | INFO     | chi2: 7.558475317389914
[2026-03-11 10:14:07] 2026-03-11 09:13:08,258 | INFO     | current chi2=7.558475317389914 (change=8.585929647915833 %)
[2026-03-11 10:14:07] 2026-03-11 09:13:08,258 | INFO     | right removable region: 241
[2026-03-11 10:14:07] 2026-03-11 09:13:08,258 | INFO     | sum of square deviations: 4394577280.5
[2026-03-11 10:14:07] 2026-03-11 09:13:08,261 | INFO     | sum of deviations: 50411047637.0
[2026-03-11 10:14:07] 2026-03-11 09:13:08,261 | INFO     | mean x: 1773212981.5
[2026-03-11 10:14:07] 2026-03-11 09:13:08,261 | INFO     | mean y: 2481538.041322314
[2026-03-11 10:14:07] 2026-03-11 09:13:08,261 | INFO     | intersect: -20338388214.68558
[2026-03-11 10:14:07] 2026-03-11 09:13:08,261 | INFO     | chi2: 3.4262939762272597
[2026-03-11 10:14:07] 2026-03-11 09:13:08,262 | INFO     | current chi2=3.4262939762272597 (change=58.561553033169275 %)
[2026-03-11 10:14:07] 2026-03-11 09:13:08,262 | INFO     | sum of square deviations: 4127772278.0
[2026-03-11 10:14:07] 2026-03-11 09:13:08,264 | INFO     | sum of deviations: -11844624614.000002
[2026-03-11 10:14:07] 2026-03-11 09:13:08,264 | INFO     | mean x: 1773213134.0
[2026-03-11 10:14:07] 2026-03-11 09:13:08,264 | INFO     | mean y: 2517067.64556962
[2026-03-11 10:14:07] 2026-03-11 09:13:08,265 | INFO     | intersect: 5090744449.951877
[2026-03-11 10:14:07] 2026-03-11 09:13:08,265 | INFO     | chi2: 0.9716158581503933
[2026-03-11 10:14:07] 2026-03-11 09:13:08,265 | INFO     | current chi2=0.9716158581503933 (change=71.6423673831907 %)
[2026-03-11 10:14:07] 2026-03-11 09:13:08,266 | INFO     | sum of square deviations: 3871990738.0
[2026-03-11 10:14:07] 2026-03-11 09:13:08,268 | INFO     | sum of deviations: -25698190593.000004
[2026-03-11 10:14:07] 2026-03-11 09:13:08,268 | INFO     | mean x: 1773213286.5
[2026-03-11 10:14:07] 2026-03-11 09:13:08,268 | INFO     | mean y: 2525276.4051724137
[2026-03-11 10:14:07] 2026-03-11 09:13:08,268 | INFO     | intersect: 11771244801.301134
[2026-03-11 10:14:07] 2026-03-11 09:13:08,268 | INFO     | chi2: 0.8112738888425458
[2026-03-11 10:14:07] 2026-03-11 09:13:08,269 | INFO     | current chi2=0.8112738888425458 (change=16.502609335039146 %)
[2026-03-11 10:14:07] 2026-03-11 09:13:08,269 | INFO     | left removable region: 30
[2026-03-11 10:14:07] 2026-03-11 09:13:08,269 | INFO     | sum of square deviations: 2912836010.0
[2026-03-11 10:14:07] 2026-03-11 09:13:08,271 | INFO     | sum of deviations: -8627733311.0
[2026-03-11 10:14:07] 2026-03-11 09:13:08,271 | INFO     | mean x: 1773213561.0
[2026-03-11 10:14:07] 2026-03-11 09:13:08,271 | INFO     | mean y: 2533898.857819905
[2026-03-11 10:14:07] 2026-03-11 09:13:08,271 | INFO     | intersect: 5254739534.614372
[2026-03-11 10:14:07] 2026-03-11 09:13:08,272 | INFO     | chi2: 0.01640381354627328
[2026-03-11 10:14:07] 2026-03-11 09:13:08,272 | INFO     | current memory leak: -2.96 B/s (using 211 data points, chi2=0.02)
[2026-03-11 10:14:07] 2026-03-11 09:13:08,273 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-03-11 10:14:07] 2026-03-11 09:13:08,273 | INFO     | ..............................
[2026-03-11 10:14:07] 2026-03-11 09:13:08,273 | INFO     | . Timing measurements:
[2026-03-11 10:14:07] 2026-03-11 09:13:08,273 | INFO     | . get job = 0 s
[2026-03-11 10:14:07] 2026-03-11 09:13:08,273 | INFO     | . initial setup = 121 s
[2026-03-11 10:14:07] 2026-03-11 09:13:08,273 | INFO     | . payload setup = 149 s
[2026-03-11 10:14:07] 2026-03-11 09:13:08,273 | INFO     | . stage-in = 0 s
[2026-03-11 10:14:07] 2026-03-11 09:13:08,274 | INFO     | . payload execution = 15163 s
[2026-03-11 10:14:07] 2026-03-11 09:13:08,274 | INFO     | . stage-out = 3 s
[2026-03-11 10:14:07] 2026-03-11 09:13:08,274 | INFO     | . log creation = 1 s
[2026-03-11 10:14:07] 2026-03-11 09:13:08,274 | INFO     | ..............................
[2026-03-11 10:14:07] 2026-03-11 09:13:08,416 | INFO     | 
[2026-03-11 10:14:07] 2026-03-11 09:13:08,416 | INFO     | job summary report
[2026-03-11 10:14:07] 2026-03-11 09:13:08,416 | INFO     | --------------------------------------------------
[2026-03-11 10:14:07] 2026-03-11 09:13:08,416 | INFO     | PanDA job id: 7036047732
[2026-03-11 10:14:07] 2026-03-11 09:13:08,416 | INFO     | task id: 48850168
[2026-03-11 10:14:07] 2026-03-11 09:13:08,416 | INFO     | errors: (none)
[2026-03-11 10:14:07] 2026-03-11 09:13:08,417 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-11 10:14:07] 2026-03-11 09:13:08,417 | INFO     | pilot state: finished 
[2026-03-11 10:14:07] 2026-03-11 09:13:08,417 | INFO     | transexitcode: 0
[2026-03-11 10:14:07] 2026-03-11 09:13:08,417 | INFO     | exeerrorcode: 0
[2026-03-11 10:14:07] 2026-03-11 09:13:08,417 | INFO     | exeerrordiag: 
[2026-03-11 10:14:07] 2026-03-11 09:13:08,417 | INFO     | exitcode: 0
[2026-03-11 10:14:07] 2026-03-11 09:13:08,417 | INFO     | exitmsg: OK
[2026-03-11 10:14:07] 2026-03-11 09:13:08,417 | INFO     | cpuconsumptiontime: 57027 s
[2026-03-11 10:14:07] 2026-03-11 09:13:08,417 | INFO     | nevents: 400
[2026-03-11 10:14:07] 2026-03-11 09:13:08,417 | INFO     | neventsw: 0
[2026-03-11 10:14:07] 2026-03-11 09:13:08,418 | INFO     | pid: 24887
[2026-03-11 10:14:07] 2026-03-11 09:13:08,418 | INFO     | pgrp: 24887
[2026-03-11 10:14:07] 2026-03-11 09:13:08,418 | INFO     | corecount: 8
[2026-03-11 10:14:07] 2026-03-11 09:13:08,418 | INFO     | event service: False
[2026-03-11 10:14:07] 2026-03-11 09:13:08,418 | INFO     | sizes: {0: 2279197, 1: 2279883, 2: 2280284, 3: 2280344, 13: 2280372, 15318: 2311624, 15322: 2320680, 15324: 2320818}
[2026-03-11 10:14:07] 2026-03-11 09:13:08,418 | INFO     | --------------------------------------------------
[2026-03-11 10:14:07] 2026-03-11 09:13:08,418 | INFO     | 
[2026-03-11 10:14:07] 2026-03-11 09:13:08,418 | INFO     | executing command: ls -lF /var/lib/boinc/slots/20
[2026-03-11 10:14:07] 2026-03-11 09:13:09,004 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-11 10:14:07] 2026-03-11 09:13:09,004 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-11 10:14:07] 2026-03-11 09:13:09,004 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-11 10:14:07] 2026-03-11 09:13:09,005 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-11 10:14:07] 2026-03-11 09:13:09,005 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-11 10:14:07] 2026-03-11 09:13:09,005 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-11 10:14:07] 2026-03-11 09:13:09,005 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-11 10:14:07] 2026-03-11 09:13:09,005 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-11 10:14:07] 2026-03-11 09:13:09,005 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-11 10:14:07] 2026-03-11 09:13:09,005 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-11 10:14:07] 2026-03-11 09:13:09,005 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-11 10:14:07] 2026-03-11 09:13:09,005 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-11 10:14:07] 2026-03-11 09:13:09,005 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-11 10:14:07] 2026-03-11 09:13:09,006 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-11 10:14:07] 2026-03-11 09:13:09,006 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-11 10:14:07] 2026-03-11 09:13:09,006 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-11 10:14:07] 2026-03-11 09:13:09,006 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-11 10:14:07] 2026-03-11 09:13:09,006 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-11 10:14:07] 2026-03-11 09:13:09,006 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-11 10:14:07] 2026-03-11 09:13:09,006 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-11 10:14:07] 2026-03-11 09:13:09,006 | INFO     | job 7036047732 has completed (purged errors)
[2026-03-11 10:14:07] 2026-03-11 09:13:09,007 | INFO     | overall cleanup function is called
[2026-03-11 10:14:07] 2026-03-11 09:13:10,021 | INFO     | --- collectZombieJob: --- 10, [24887]
[2026-03-11 10:14:07] 2026-03-11 09:13:10,022 | INFO     | zombie collector waiting for pid 24887
[2026-03-11 10:14:07] 2026-03-11 09:13:10,022 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-11 10:14:07] 2026-03-11 09:13:10,022 | INFO     | collected zombie processes
[2026-03-11 10:14:07] 2026-03-11 09:13:10,022 | INFO     | will attempt to kill all subprocesses of pid=24887
[2026-03-11 10:14:07] 2026-03-11 09:13:10,114 | INFO     | process IDs to be killed: [24887] (in reverse order)
[2026-03-11 10:14:07] 2026-03-11 09:13:11,019 | WARNING  | found no corresponding commands to process id(s)
[2026-03-11 10:14:07] 2026-03-11 09:13:11,019 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-11 10:14:07] 2026-03-11 09:13:11,021 | INFO     | did not find any defunct processes belonging to 24887
[2026-03-11 10:14:07] 2026-03-11 09:13:11,023 | INFO     | did not find any defunct processes belonging to 24887
[2026-03-11 10:14:07] 2026-03-11 09:13:11,023 | INFO     | ready for new job
[2026-03-11 10:14:07] 2026-03-11 09:13:11,023 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-11 10:14:07] 2026-03-11 09:13:11,025 | INFO     | **************************************
[2026-03-11 10:14:07] 2026-03-11 09:13:11,026 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-11 10:14:07] 2026-03-11 09:13:11,026 | INFO     | **************************************
[2026-03-11 10:14:07] 2026-03-11 09:13:11,026 | INFO     | 
[2026-03-11 10:14:07] 2026-03-11 09:13:11,026 | INFO     | pilot is running in a VM
[2026-03-11 10:14:07] 2026-03-11 09:13:11,027 | INFO     | architecture information:
[2026-03-11 10:14:07] 2026-03-11 09:13:11,038 | INFO     | executing command: cat /etc/os-release
[2026-03-11 10:14:07] 2026-03-11 09:13:11,271 | INFO     | cat /etc/os-release:
[2026-03-11 10:14:07] NAME="CentOS Linux"
[2026-03-11 10:14:07] VERSION="7 (Core)"
[2026-03-11 10:14:07] ID="centos"
[2026-03-11 10:14:07] ID_LIKE="rhel fedora"
[2026-03-11 10:14:07] VERSION_ID="7"
[2026-03-11 10:14:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-11 10:14:07] ANSI_COLOR="0;31"
[2026-03-11 10:14:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-11 10:14:07] HOME_URL="https://www.centos.org/"
[2026-03-11 10:14:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-11 10:14:07] 
[2026-03-11 10:14:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-11 10:14:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-11 10:14:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-11 10:14:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-11 10:14:07] 
[2026-03-11 10:14:07] 2026-03-11 09:13:11,271 | INFO     | **************************************
[2026-03-11 10:14:07] 2026-03-11 09:13:11,775 | INFO     | executing command: df -mP /var/lib/boinc/slots/20
[2026-03-11 10:14:07] 2026-03-11 09:13:12,012 | INFO     | sufficient remaining disk space (496034119680 B)
[2026-03-11 10:14:07] 2026-03-11 09:13:12,012 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-11 10:14:07] 2026-03-11 09:13:12,013 | INFO     | current server update state: UPDATING_FINAL
[2026-03-11 10:14:07] 2026-03-11 09:13:12,013 | INFO     | update_server=False
[2026-03-11 10:14:07] 2026-03-11 09:13:12,013 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-11 10:14:07] 2026-03-11 09:13:12,013 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 10:14:07] 2026-03-11 09:13:12,018 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-11 10:14:07] 2026-03-11 09:13:12,019 | INFO     | aborting loop
[2026-03-11 10:14:07] 2026-03-11 09:13:12,567 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 10:14:07] 2026-03-11 09:13:12,605 | INFO     | all payload control threads have been joined
[2026-03-11 10:14:07] 2026-03-11 09:13:13,019 | INFO     | [job] retrieve thread has finished
[2026-03-11 10:14:07] 2026-03-11 09:13:13,024 | INFO     | [job] job monitor thread has finished
[2026-03-11 10:14:07] 2026-03-11 09:13:13,054 | INFO     | all data control threads have been joined
[2026-03-11 10:14:07] 2026-03-11 09:13:13,292 | INFO     | all job control threads have been joined
[2026-03-11 10:14:07] 2026-03-11 09:13:13,415 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 10:14:07] 2026-03-11 09:13:13,430 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 10:14:07] 2026-03-11 09:13:13,609 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 10:14:07] 2026-03-11 09:13:13,611 | INFO     | [payload] control thread has finished
[2026-03-11 10:14:07] 2026-03-11 09:13:13,899 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 10:14:07] 2026-03-11 09:13:14,020 | INFO     | [data] copytool_out thread has finished
[2026-03-11 10:14:07] 2026-03-11 09:13:14,022 | INFO     | [data] copytool_in thread has finished
[2026-03-11 10:14:07] 2026-03-11 09:13:14,060 | INFO     | [data] control thread has finished
[2026-03-11 10:14:07] 2026-03-11 09:13:14,123 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 10:14:07] 2026-03-11 09:13:14,155 | INFO     | [payload] validate_post thread has finished
[2026-03-11 10:14:07] 2026-03-11 09:13:14,230 | INFO     | [job] validate thread has finished
[2026-03-11 10:14:07] 2026-03-11 09:13:14,298 | INFO     | [job] control thread has finished
[2026-03-11 10:14:07] 2026-03-11 09:13:14,436 | INFO     | [job] queue monitor thread has finished
[2026-03-11 10:14:07] 2026-03-11 09:13:14,561 | INFO     | [payload] failed_post thread has finished
[2026-03-11 10:14:07] 2026-03-11 09:13:16,578 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 10:14:07] 2026-03-11 09:13:41,376 | INFO     | PID=20455 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-11 10:14:07] 2026-03-11 09:13:41,377 | INFO     | .. there are 2 such processes running
[2026-03-11 10:14:07] 2026-03-11 09:13:41,377 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 10:14:07] 2026-03-11 09:13:41,377 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 10:14:07] 2026-03-11 09:13:41,377 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 10:14:07] 2026-03-11 09:13:57,554 | INFO     | [monitor] cgroup control has ended
[2026-03-11 10:14:07] 2026-03-11 09:13:57,649 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139929712699200)>', '<ExcThread(monitor, started 139929279518464)>']
[2026-03-11 10:14:07] 2026-03-11 09:13:58,479 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 10:14:07] 2026-03-11 09:13:58,480 | INFO     | [monitor] control thread has ended
[2026-03-11 10:14:07] 2026-03-11 09:14:02,675 | INFO     | all workflow threads have been joined
[2026-03-11 10:14:07] 2026-03-11 09:14:02,676 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 10:14:07] 2026-03-11 09:14:02,676 | INFO     | traces error code: 0
[2026-03-11 10:14:07] 2026-03-11 09:14:02,676 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 10:14:07] 2026-03-11 09:14:03,175 [wrapper] ==== pilot stdout END ====
[2026-03-11 10:14:07] 2026-03-11 09:14:03,264 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 10:14:07] 2026-03-11 09:14:03,386 [wrapper] pilotpid: 20455
[2026-03-11 10:14:07] 2026-03-11 09:14:03,487 [wrapper] Pilot exit status: 0
[2026-03-11 10:14:07] 2026-03-11 09:14:03,939 [wrapper] pandaids: 7036047732
[2026-03-11 10:14:07] 2026-03-11 09:14:04,752 [wrapper] cleanup supervisor_pilot 31083 20456
[2026-03-11 10:14:07] 2026-03-11 09:14:04,854 [wrapper] Test setup, not cleaning
[2026-03-11 10:14:07] 2026-03-11 09:14:04,957 [wrapper] apfmon messages muted
[2026-03-11 10:14:07] 2026-03-11 09:14:05,068 [wrapper] ==== wrapper stdout END ====
[2026-03-11 10:14:07] 2026-03-11 09:14:05,182 [wrapper] ==== wrapper stderr END ====
[2026-03-11 10:14:07]  *** Error codes and diagnostics ***
[2026-03-11 10:14:07]     "exeErrorCode": 0,
[2026-03-11 10:14:07]     "exeErrorDiag": "",
[2026-03-11 10:14:07]     "pilotErrorCode": 0,
[2026-03-11 10:14:07]     "pilotErrorDiag": "",
[2026-03-11 10:14:08]  *** Listing of results directory ***
[2026-03-11 10:14:08] total 457592
[2026-03-11 10:14:08] -rw-r--r--. 1 boinc boinc    584627 Mar  2 18:50 pilot3.tar.gz
[2026-03-11 10:14:08] -rw-r--r--. 1 boinc boinc      5111 Mar  2 18:53 queuedata.json
[2026-03-11 10:14:08] -rwx------. 1 boinc boinc     36322 Mar  2 18:54 runpilot2-wrapper.sh
[2026-03-11 10:14:08] -rw-r--r--. 1 boinc boinc       100 Mar 11 05:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 10:14:08] -rwxr-xr-x. 1 boinc boinc      7986 Mar 11 05:50 run_atlas
[2026-03-11 10:14:08] -rw-r--r--. 1 boinc boinc       105 Mar 11 05:50 job.xml
[2026-03-11 10:14:08] -rw-r--r--. 1 boinc boinc      6392 Mar 11 05:50 init_data.xml
[2026-03-11 10:14:08] -rw-r--r--. 2 boinc boinc 267338723 Mar 11 05:50 EVNT.48458362._000001.pool.root.1
[2026-03-11 10:14:08] -rw-r--r--. 2 boinc boinc     15845 Mar 11 05:50 start_atlas.sh
[2026-03-11 10:14:08] drwxrwx--x. 2 boinc boinc        68 Mar 11 05:50 shared
[2026-03-11 10:14:08] -rw-r--r--. 2 boinc boinc    597950 Mar 11 05:50 input.tar.gz
[2026-03-11 10:14:08] -rw-r--r--. 1 boinc boinc         0 Mar 11 05:50 boinc_lockfile
[2026-03-11 10:14:08] -rw-r--r--. 1 boinc boinc      2603 Mar 11 05:50 pandaJob.out
[2026-03-11 10:14:08] -rw-------. 1 boinc boinc       415 Mar 11 05:57 workernode_map.json
[2026-03-11 10:14:08] -rw-------. 1 boinc boinc   1006644 Mar 11 05:57 agis_schedconf.cvmfs.json
[2026-03-11 10:14:08] drwx------. 5 boinc boinc      4096 Mar 11 05:57 pilot3
[2026-03-11 10:14:08] -rw-------. 1 boinc boinc 192059707 Mar 11 10:11 HITS.48850168._000011.pool.root.1
[2026-03-11 10:14:08] -rw-r--r--. 1 boinc boinc       530 Mar 11 10:12 boinc_task_state.xml
[2026-03-11 10:14:08] -rw-------. 1 boinc boinc        95 Mar 11 10:12 pilot_heartbeat.json
[2026-03-11 10:14:08] -rw-------. 1 boinc boinc      1012 Mar 11 10:12 memory_monitor_summary.json
[2026-03-11 10:14:08] -rw-------. 1 boinc boinc   1511578 Mar 11 10:13 agis_ddmendpoints.agis.ALL.json
[2026-03-11 10:14:08] -rw-------. 1 boinc boinc    472524 Mar 11 10:13 log.48850168._000011.job.log.tgz.1
[2026-03-11 10:14:08] -rw-------. 1 boinc boinc      6309 Mar 11 10:13 heartbeat.json
[2026-03-11 10:14:08] -rw-r--r--. 1 boinc boinc        28 Mar 11 10:13 wrapper_checkpoint.txt
[2026-03-11 10:14:08] -rw-r--r--. 1 boinc boinc      8192 Mar 11 10:13 boinc_mmap_file
[2026-03-11 10:14:08] -rw-------. 1 boinc boinc      4881 Mar 11 10:14 pilotlog.txt
[2026-03-11 10:14:08] -rw-------. 1 boinc boinc   2156436 Mar 11 10:14 log.48850168._000011.job.log.1
[2026-03-11 10:14:08] -rw-------. 1 boinc boinc       357 Mar 11 10:14 output.list
[2026-03-11 10:14:08] -rw-r--r--. 1 boinc boinc       620 Mar 11 10:14 runtime_log
[2026-03-11 10:14:08] -rw-------. 1 boinc boinc   2641920 Mar 11 10:14 result.tar.gz
[2026-03-11 10:14:08] -rw-r--r--. 1 boinc boinc      8832 Mar 11 10:14 runtime_log.err
[2026-03-11 10:14:08] -rw-------. 1 boinc boinc       656 Mar 11 10:14 3XALDmYeMH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmQEELDmBItxQo.diag
[2026-03-11 10:14:08] -rw-r--r--. 1 boinc boinc     20672 Mar 11 10:14 stderr.txt
[2026-03-11 10:14:08] HITS file was successfully produced:
[2026-03-11 10:14:08] -rw-------. 1 boinc boinc 192059707 Mar 11 10:11 shared/HITS.pool.root.1
[2026-03-11 10:14:08]  *** Contents of shared directory: ***
[2026-03-11 10:14:08] total 451816
[2026-03-11 10:14:08] -rw-r--r--. 2 boinc boinc 267338723 Mar 11 05:50 ATLAS.root_0
[2026-03-11 10:14:08] -rw-r--r--. 2 boinc boinc     15845 Mar 11 05:50 start_atlas.sh
[2026-03-11 10:14:08] -rw-r--r--. 2 boinc boinc    597950 Mar 11 05:50 input.tar.gz
[2026-03-11 10:14:08] -rw-------. 1 boinc boinc 192059707 Mar 11 10:11 HITS.pool.root.1
[2026-03-11 10:14:08] -rw-------. 1 boinc boinc   2641920 Mar 11 10:14 result.tar.gz
10:14:09 (16420): run_atlas exited; CPU time 57192.789902
10:14:09 (16420): called boinc_finish(0)

</stderr_txt>
]]>

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