Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:44:47 (21781): wrapper (7.7.26015): starting
06:44:47 (21781): wrapper: running run_atlas (--nthreads 8)
[2026-03-11 06:44:47] Arguments: --nthreads 8
[2026-03-11 06:44:47] Threads: 8
[2026-03-11 06:44:47] Checking for CVMFS
[2026-03-11 06:44:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 06:44:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 06:44:49] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 06:44:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 06:44:51] 2.11.2.0 15043 122834 133336 157144 0 55 20174394 25165825 899 130560 153 42576691 99.834 33523084 1109 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-11 06:44:51] CVMFS is ok
[2026-03-11 06:44:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 06:44:51] Checking for apptainer binary...
[2026-03-11 06:44:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 06:44:51] Running /usr/bin/apptainer --version
[2026-03-11 06:44:51] apptainer version 1.3.2-1.el7
[2026-03-11 06:44:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 06:45:13] cg-vwn492.simple-grid.lan
[2026-03-11 06:45:13] apptainer works
[2026-03-11 06:45:13] Set ATHENA_PROC_NUMBER=8
[2026-03-11 06:45:13] Set ATHENA_CORE_NUMBER=8
[2026-03-11 06:45:13] Starting ATLAS job with PandaID=7036055489
[2026-03-11 06:45:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 10:08:36]  *** The last 200 lines of the pilot log: ***
[2026-03-11 10:08:36] 2026-03-11 09:07:49,854 | INFO     | job 7036055489 has finished - writing final server update
[2026-03-11 10:08:36] 2026-03-11 09:07:49,855 | INFO     | total number of processed events: 400 (read)
[2026-03-11 10:08:36] 2026-03-11 09:07:49,856 | INFO     | using path: /var/lib/boinc/slots/15/PanDA_Pilot-7036055489/memory_monitor_summary.json (trf name=prmon)
[2026-03-11 10:08:36] 2026-03-11 09:07:49,857 | INFO     | extracted standard info from prmon json
[2026-03-11 10:08:36] 2026-03-11 09:07:49,857 | INFO     | extracted standard memory fields from prmon json
[2026-03-11 10:08:36] 2026-03-11 09:07:49,857 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-11 10:08:36] 2026-03-11 09:07:49,858 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-11 10:08:36] 2026-03-11 09:07:49,858 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-11 10:08:36] 2026-03-11 09:07:49,862 | INFO     | fitting pss+swap vs Time
[2026-03-11 10:08:36] 2026-03-11 09:07:49,862 | INFO     | sum of square deviations: 2093397390.0
[2026-03-11 10:08:36] 2026-03-11 09:07:49,863 | INFO     | sum of deviations: 102200540455.99998
[2026-03-11 10:08:36] 2026-03-11 09:07:49,864 | INFO     | mean x: 1773214275.0
[2026-03-11 10:08:36] 2026-03-11 09:07:49,864 | INFO     | mean y: 2369408.470899471
[2026-03-11 10:08:36] 2026-03-11 09:07:49,864 | INFO     | intersect: -86566696797.01157
[2026-03-11 10:08:36] 2026-03-11 09:07:49,864 | INFO     | chi2: 8.725629414285546
[2026-03-11 10:08:36] 2026-03-11 09:07:49,865 | INFO     | sum of square deviations: 1931608310.0
[2026-03-11 10:08:36] 2026-03-11 09:07:49,866 | INFO     | sum of deviations: 111587531495.00005
[2026-03-11 10:08:36] 2026-03-11 09:07:49,866 | INFO     | mean x: 1773214122.5
[2026-03-11 10:08:36] 2026-03-11 09:07:49,866 | INFO     | mean y: 2378004.402173913
[2026-03-11 10:08:36] 2026-03-11 09:07:49,866 | INFO     | intersect: -102434842687.53387
[2026-03-11 10:08:36] 2026-03-11 09:07:49,867 | INFO     | chi2: 8.045063273469086
[2026-03-11 10:08:36] 2026-03-11 09:07:49,867 | INFO     | current chi2=8.045063273469086 (change=7.799622336724971 %)
[2026-03-11 10:08:36] 2026-03-11 09:07:49,867 | INFO     | right removable region: 183
[2026-03-11 10:08:36] 2026-03-11 09:07:49,867 | INFO     | sum of square deviations: 1931608310.0
[2026-03-11 10:08:36] 2026-03-11 09:07:49,869 | INFO     | sum of deviations: 38009330244.5
[2026-03-11 10:08:36] 2026-03-11 09:07:49,869 | INFO     | mean x: 1773214427.5
[2026-03-11 10:08:36] 2026-03-11 09:07:49,869 | INFO     | mean y: 2429869.179347826
[2026-03-11 10:08:36] 2026-03-11 09:07:49,869 | INFO     | intersect: -34890095918.908356
[2026-03-11 10:08:36] 2026-03-11 09:07:49,869 | INFO     | chi2: 3.5323221705927725
[2026-03-11 10:08:36] 2026-03-11 09:07:49,869 | INFO     | current chi2=3.5323221705927725 (change=59.517852490850956 %)
[2026-03-11 10:08:36] 2026-03-11 09:07:49,870 | INFO     | sum of square deviations: 1778377530.0
[2026-03-11 10:08:36] 2026-03-11 09:07:49,871 | INFO     | sum of deviations: -9595739078.0
[2026-03-11 10:08:36] 2026-03-11 09:07:49,871 | INFO     | mean x: 1773214580.0
[2026-03-11 10:08:36] 2026-03-11 09:07:49,871 | INFO     | mean y: 2477154.324022346
[2026-03-11 10:08:36] 2026-03-11 09:07:49,871 | INFO     | intersect: 9570358074.965971
[2026-03-11 10:08:36] 2026-03-11 09:07:49,872 | INFO     | chi2: 0.9246436358121639
[2026-03-11 10:08:36] 2026-03-11 09:07:49,872 | INFO     | current chi2=0.9246436358121639 (change=73.8233493108304 %)
[2026-03-11 10:08:36] 2026-03-11 09:07:49,872 | INFO     | sum of square deviations: 1633472487.5
[2026-03-11 10:08:36] 2026-03-11 09:07:49,873 | INFO     | sum of deviations: -15061256789.0
[2026-03-11 10:08:36] 2026-03-11 09:07:49,873 | INFO     | mean x: 1773214732.5
[2026-03-11 10:08:36] 2026-03-11 09:07:49,874 | INFO     | mean y: 2482834.7701149425
[2026-03-11 10:08:36] 2026-03-11 09:07:49,874 | INFO     | intersect: 16352217913.011183
[2026-03-11 10:08:36] 2026-03-11 09:07:49,874 | INFO     | chi2: 0.8605843652275066
[2026-03-11 10:08:36] 2026-03-11 09:07:49,874 | INFO     | current chi2=0.8605843652275066 (change=6.927995619457289 %)
[2026-03-11 10:08:36] 2026-03-11 09:07:49,874 | INFO     | left removable region: 30
[2026-03-11 10:08:36] 2026-03-11 09:07:49,874 | INFO     | sum of square deviations: 1110539892.0
[2026-03-11 10:08:36] 2026-03-11 09:07:49,875 | INFO     | sum of deviations: 3513093089.9999995
[2026-03-11 10:08:36] 2026-03-11 09:07:49,876 | INFO     | mean x: 1773215007.0
[2026-03-11 10:08:36] 2026-03-11 09:07:49,876 | INFO     | mean y: 2487320.4640522874
[2026-03-11 10:08:36] 2026-03-11 09:07:49,876 | INFO     | intersect: -5606918908.930543
[2026-03-11 10:08:36] 2026-03-11 09:07:49,876 | INFO     | chi2: 0.0007388506245238035
[2026-03-11 10:08:36] 2026-03-11 09:07:49,876 | INFO     | current memory leak: 3.16 B/s (using 153 data points, chi2=0.00)
[2026-03-11 10:08:36] 2026-03-11 09:07:49,877 | INFO     | could have reported an average CPU frequency of 2249 MHz (10 samples)
[2026-03-11 10:08:36] 2026-03-11 09:07:49,877 | INFO     | ..............................
[2026-03-11 10:08:36] 2026-03-11 09:07:49,877 | INFO     | . Timing measurements:
[2026-03-11 10:08:36] 2026-03-11 09:07:49,877 | INFO     | . get job = 0 s
[2026-03-11 10:08:36] 2026-03-11 09:07:49,877 | INFO     | . initial setup = 120 s
[2026-03-11 10:08:36] 2026-03-11 09:07:49,877 | INFO     | . payload setup = 138 s
[2026-03-11 10:08:36] 2026-03-11 09:07:49,877 | INFO     | . stage-in = 0 s
[2026-03-11 10:08:36] 2026-03-11 09:07:49,878 | INFO     | . payload execution = 11652 s
[2026-03-11 10:08:36] 2026-03-11 09:07:49,878 | INFO     | . stage-out = 3 s
[2026-03-11 10:08:36] 2026-03-11 09:07:49,878 | INFO     | . log creation = 1 s
[2026-03-11 10:08:36] 2026-03-11 09:07:49,878 | INFO     | ..............................
[2026-03-11 10:08:36] 2026-03-11 09:07:50,022 | INFO     | 
[2026-03-11 10:08:36] 2026-03-11 09:07:50,022 | INFO     | job summary report
[2026-03-11 10:08:36] 2026-03-11 09:07:50,023 | INFO     | --------------------------------------------------
[2026-03-11 10:08:36] 2026-03-11 09:07:50,023 | INFO     | PanDA job id: 7036055489
[2026-03-11 10:08:36] 2026-03-11 09:07:50,023 | INFO     | task id: 48700890
[2026-03-11 10:08:36] 2026-03-11 09:07:50,023 | INFO     | errors: (none)
[2026-03-11 10:08:36] 2026-03-11 09:07:50,023 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-11 10:08:36] 2026-03-11 09:07:50,023 | INFO     | pilot state: finished 
[2026-03-11 10:08:36] 2026-03-11 09:07:50,023 | INFO     | transexitcode: 0
[2026-03-11 10:08:36] 2026-03-11 09:07:50,023 | INFO     | exeerrorcode: 0
[2026-03-11 10:08:36] 2026-03-11 09:07:50,023 | INFO     | exeerrordiag: 
[2026-03-11 10:08:36] 2026-03-11 09:07:50,023 | INFO     | exitcode: 0
[2026-03-11 10:08:36] 2026-03-11 09:07:50,024 | INFO     | exitmsg: OK
[2026-03-11 10:08:36] 2026-03-11 09:07:50,024 | INFO     | cpuconsumptiontime: 42442 s
[2026-03-11 10:08:36] 2026-03-11 09:07:50,024 | INFO     | nevents: 400
[2026-03-11 10:08:36] 2026-03-11 09:07:50,024 | INFO     | neventsw: 0
[2026-03-11 10:08:36] 2026-03-11 09:07:50,024 | INFO     | pid: 30475
[2026-03-11 10:08:36] 2026-03-11 09:07:50,024 | INFO     | pgrp: 30475
[2026-03-11 10:08:36] 2026-03-11 09:07:50,024 | INFO     | corecount: 8
[2026-03-11 10:08:36] 2026-03-11 09:07:50,024 | INFO     | event service: False
[2026-03-11 10:08:36] 2026-03-11 09:07:50,024 | INFO     | sizes: {0: 2279025, 1: 2280084, 2: 2280172, 11794: 2309593, 11795: 2309592, 11799: 2318676, 11801: 2318860, 11802: 2319054}
[2026-03-11 10:08:36] 2026-03-11 09:07:50,024 | INFO     | --------------------------------------------------
[2026-03-11 10:08:36] 2026-03-11 09:07:50,025 | INFO     | 
[2026-03-11 10:08:36] 2026-03-11 09:07:50,025 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2026-03-11 10:08:36] 2026-03-11 09:07:50,158 | INFO     | time since job start (11804s) is within the limit (349056.0s)
[2026-03-11 10:08:36] 2026-03-11 09:07:50,652 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-11 10:08:36] 2026-03-11 09:07:50,652 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-11 10:08:36] 2026-03-11 09:07:50,652 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-11 10:08:36] 2026-03-11 09:07:50,652 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-11 10:08:36] 2026-03-11 09:07:50,652 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-11 10:08:36] 2026-03-11 09:07:50,652 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-11 10:08:36] 2026-03-11 09:07:50,652 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-11 10:08:36] 2026-03-11 09:07:50,653 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-11 10:08:36] 2026-03-11 09:07:50,653 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-11 10:08:36] 2026-03-11 09:07:50,653 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-11 10:08:36] 2026-03-11 09:07:50,653 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-11 10:08:36] 2026-03-11 09:07:50,653 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-11 10:08:36] 2026-03-11 09:07:50,653 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-11 10:08:36] 2026-03-11 09:07:50,653 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-11 10:08:36] 2026-03-11 09:07:50,653 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-11 10:08:36] 2026-03-11 09:07:50,653 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-11 10:08:36] 2026-03-11 09:07:50,654 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-11 10:08:36] 2026-03-11 09:07:50,654 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-11 10:08:36] 2026-03-11 09:07:50,654 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-11 10:08:36] 2026-03-11 09:07:50,654 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-11 10:08:36] 2026-03-11 09:07:50,654 | INFO     | job 7036055489 has completed (purged errors)
[2026-03-11 10:08:36] 2026-03-11 09:07:50,654 | INFO     | overall cleanup function is called
[2026-03-11 10:08:36] 2026-03-11 09:07:51,668 | INFO     | --- collectZombieJob: --- 10, [30475]
[2026-03-11 10:08:36] 2026-03-11 09:07:51,668 | INFO     | zombie collector waiting for pid 30475
[2026-03-11 10:08:36] 2026-03-11 09:07:51,669 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-11 10:08:36] 2026-03-11 09:07:51,669 | INFO     | collected zombie processes
[2026-03-11 10:08:36] 2026-03-11 09:07:51,669 | INFO     | will attempt to kill all subprocesses of pid=30475
[2026-03-11 10:08:36] 2026-03-11 09:07:51,752 | INFO     | process IDs to be killed: [30475] (in reverse order)
[2026-03-11 10:08:36] 2026-03-11 09:07:52,717 | WARNING  | found no corresponding commands to process id(s)
[2026-03-11 10:08:36] 2026-03-11 09:07:52,717 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-11 10:08:36] 2026-03-11 09:07:52,719 | INFO     | did not find any defunct processes belonging to 30475
[2026-03-11 10:08:36] 2026-03-11 09:07:52,721 | INFO     | did not find any defunct processes belonging to 30475
[2026-03-11 10:08:36] 2026-03-11 09:07:52,721 | INFO     | ready for new job
[2026-03-11 10:08:36] 2026-03-11 09:07:52,721 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-11 10:08:36] 2026-03-11 09:07:52,723 | INFO     | **************************************
[2026-03-11 10:08:36] 2026-03-11 09:07:52,723 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-11 10:08:36] 2026-03-11 09:07:52,723 | INFO     | **************************************
[2026-03-11 10:08:36] 2026-03-11 09:07:52,723 | INFO     | 
[2026-03-11 10:08:36] 2026-03-11 09:07:52,724 | INFO     | pilot is running in a VM
[2026-03-11 10:08:36] 2026-03-11 09:07:52,724 | INFO     | architecture information:
[2026-03-11 10:08:36] 2026-03-11 09:07:52,734 | INFO     | executing command: cat /etc/os-release
[2026-03-11 10:08:36] 2026-03-11 09:07:53,005 | INFO     | cat /etc/os-release:
[2026-03-11 10:08:36] NAME="CentOS Linux"
[2026-03-11 10:08:36] VERSION="7 (Core)"
[2026-03-11 10:08:36] ID="centos"
[2026-03-11 10:08:36] ID_LIKE="rhel fedora"
[2026-03-11 10:08:36] VERSION_ID="7"
[2026-03-11 10:08:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-11 10:08:36] ANSI_COLOR="0;31"
[2026-03-11 10:08:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-11 10:08:36] HOME_URL="https://www.centos.org/"
[2026-03-11 10:08:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-11 10:08:36] 
[2026-03-11 10:08:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-11 10:08:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-11 10:08:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-11 10:08:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-11 10:08:36] 
[2026-03-11 10:08:36] 2026-03-11 09:07:53,005 | INFO     | **************************************
[2026-03-11 10:08:36] 2026-03-11 09:07:53,511 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2026-03-11 10:08:36] 2026-03-11 09:07:53,662 | INFO     | sufficient remaining disk space (497178116096 B)
[2026-03-11 10:08:36] 2026-03-11 09:07:53,662 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-11 10:08:36] 2026-03-11 09:07:53,662 | INFO     | current server update state: UPDATING_FINAL
[2026-03-11 10:08:36] 2026-03-11 09:07:53,662 | INFO     | update_server=False
[2026-03-11 10:08:36] 2026-03-11 09:07:53,663 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-11 10:08:36] 2026-03-11 09:07:53,663 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-11 10:08:36] 2026-03-11 09:07:53,663 | INFO     | aborting loop
[2026-03-11 10:08:36] 2026-03-11 09:07:53,665 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 10:08:36] 2026-03-11 09:07:54,543 | INFO     | all job control threads have been joined
[2026-03-11 10:08:36] 2026-03-11 09:07:54,668 | INFO     | [job] retrieve thread has finished
[2026-03-11 10:08:36] 2026-03-11 09:07:54,669 | INFO     | [job] job monitor thread has finished
[2026-03-11 10:08:36] 2026-03-11 09:07:54,713 | INFO     | all data control threads have been joined
[2026-03-11 10:08:36] 2026-03-11 09:07:54,738 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 10:08:36] 2026-03-11 09:07:54,756 | INFO     | [data] copytool_in thread has finished
[2026-03-11 10:08:36] 2026-03-11 09:07:54,898 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 10:08:36] 2026-03-11 09:07:54,939 | INFO     | all payload control threads have been joined
[2026-03-11 10:08:36] 2026-03-11 09:07:55,045 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 10:08:36] 2026-03-11 09:07:55,106 | INFO     | [job] validate thread has finished
[2026-03-11 10:08:36] 2026-03-11 09:07:55,179 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 10:08:36] 2026-03-11 09:07:55,219 | INFO     | [payload] failed_post thread has finished
[2026-03-11 10:08:36] 2026-03-11 09:07:55,353 | INFO     | [payload] validate_post thread has finished
[2026-03-11 10:08:36] 2026-03-11 09:07:55,549 | INFO     | [job] control thread has finished
[2026-03-11 10:08:36] 2026-03-11 09:07:55,553 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 10:08:36] 2026-03-11 09:07:55,672 | INFO     | [data] copytool_out thread has finished
[2026-03-11 10:08:36] 2026-03-11 09:07:55,719 | INFO     | [data] control thread has finished
[2026-03-11 10:08:36] 2026-03-11 09:07:55,898 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 10:08:36] 2026-03-11 09:07:55,945 | INFO     | [payload] control thread has finished
[2026-03-11 10:08:36] 2026-03-11 09:07:56,051 | INFO     | [job] queue monitor thread has finished
[2026-03-11 10:08:36] 2026-03-11 09:07:59,188 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 10:08:36] 2026-03-11 09:08:23,291 | INFO     | PID=25949 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-11 10:08:36] 2026-03-11 09:08:23,291 | INFO     | .. there are 2 such processes running
[2026-03-11 10:08:36] 2026-03-11 09:08:23,292 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 10:08:36] 2026-03-11 09:08:23,292 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 10:08:36] 2026-03-11 09:08:23,292 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 10:08:36] 2026-03-11 09:08:25,291 | INFO     | [monitor] cgroup control has ended
[2026-03-11 10:08:36] 2026-03-11 09:08:26,471 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140654800295744)>', '<ExcThread(monitor, started 140653468055296)>']
[2026-03-11 10:08:36] 2026-03-11 09:08:27,316 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 10:08:36] 2026-03-11 09:08:27,316 | INFO     | [monitor] control thread has ended
[2026-03-11 10:08:36] 2026-03-11 09:08:31,497 | INFO     | all workflow threads have been joined
[2026-03-11 10:08:36] 2026-03-11 09:08:31,497 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 10:08:36] 2026-03-11 09:08:31,498 | INFO     | traces error code: 0
[2026-03-11 10:08:36] 2026-03-11 09:08:31,498 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 10:08:36] 2026-03-11 09:08:31,923 [wrapper] ==== pilot stdout END ====
[2026-03-11 10:08:36] 2026-03-11 09:08:32,045 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 10:08:36] 2026-03-11 09:08:32,168 [wrapper] pilotpid: 25949
[2026-03-11 10:08:36] 2026-03-11 09:08:32,299 [wrapper] Pilot exit status: 0
[2026-03-11 10:08:36] 2026-03-11 09:08:32,833 [wrapper] pandaids: 7036055489
[2026-03-11 10:08:36] 2026-03-11 09:08:34,050 [wrapper] cleanup supervisor_pilot  3683 25950
[2026-03-11 10:08:36] 2026-03-11 09:08:34,145 [wrapper] Test setup, not cleaning
[2026-03-11 10:08:36] 2026-03-11 09:08:34,274 [wrapper] apfmon messages muted
[2026-03-11 10:08:36] 2026-03-11 09:08:34,371 [wrapper] ==== wrapper stdout END ====
[2026-03-11 10:08:36] 2026-03-11 09:08:34,460 [wrapper] ==== wrapper stderr END ====
[2026-03-11 10:08:36]  *** Error codes and diagnostics ***
[2026-03-11 10:08:36]     "exeErrorCode": 0,
[2026-03-11 10:08:36]     "exeErrorDiag": "",
[2026-03-11 10:08:36]     "pilotErrorCode": 0,
[2026-03-11 10:08:36]     "pilotErrorDiag": "",
[2026-03-11 10:08:36]  *** Listing of results directory ***
[2026-03-11 10:08:36] total 339056
[2026-03-11 10:08:36] -rw-r--r--. 1 boinc boinc    584627 Mar  2 18:50 pilot3.tar.gz
[2026-03-11 10:08:36] -rw-r--r--. 1 boinc boinc      5111 Mar  2 19:01 queuedata.json
[2026-03-11 10:08:36] -rwx------. 1 boinc boinc     36322 Mar  2 19:01 runpilot2-wrapper.sh
[2026-03-11 10:08:36] -rw-r--r--. 1 boinc boinc       100 Mar 11 06:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 10:08:36] -rwxr-xr-x. 1 boinc boinc      7986 Mar 11 06:44 run_atlas
[2026-03-11 10:08:36] -rw-r--r--. 1 boinc boinc       105 Mar 11 06:44 job.xml
[2026-03-11 10:08:36] -rw-r--r--. 2 boinc boinc 188262431 Mar 11 06:44 EVNT.48700888._000055.pool.root.1
[2026-03-11 10:08:36] -rw-r--r--. 2 boinc boinc    597929 Mar 11 06:44 input.tar.gz
[2026-03-11 10:08:36] -rw-r--r--. 1 boinc boinc      6392 Mar 11 06:44 init_data.xml
[2026-03-11 10:08:36] -rw-r--r--. 2 boinc boinc     15845 Mar 11 06:44 start_atlas.sh
[2026-03-11 10:08:36] drwxrwx--x. 2 boinc boinc        68 Mar 11 06:44 shared
[2026-03-11 10:08:36] -rw-r--r--. 1 boinc boinc         0 Mar 11 06:44 boinc_lockfile
[2026-03-11 10:08:36] -rw-r--r--. 1 boinc boinc      2511 Mar 11 06:45 pandaJob.out
[2026-03-11 10:08:36] -rw-------. 1 boinc boinc       415 Mar 11 06:50 workernode_map.json
[2026-03-11 10:08:36] -rw-------. 1 boinc boinc   1006644 Mar 11 06:51 agis_schedconf.cvmfs.json
[2026-03-11 10:08:36] drwx------. 5 boinc boinc      4096 Mar 11 06:51 pilot3
[2026-03-11 10:08:36] -rw-------. 1 boinc boinc 150784893 Mar 11 10:06 HITS.48700890._001319.pool.root.1
[2026-03-11 10:08:36] -rw-r--r--. 1 boinc boinc       531 Mar 11 10:06 boinc_task_state.xml
[2026-03-11 10:08:36] -rw-------. 1 boinc boinc      1012 Mar 11 10:07 memory_monitor_summary.json
[2026-03-11 10:08:36] -rw-------. 1 boinc boinc   1511578 Mar 11 10:07 agis_ddmendpoints.agis.ALL.json
[2026-03-11 10:08:36] -rw-------. 1 boinc boinc    435696 Mar 11 10:07 log.48700890._001319.job.log.tgz.1
[2026-03-11 10:08:36] -rw-------. 1 boinc boinc      6316 Mar 11 10:07 heartbeat.json
[2026-03-11 10:08:36] -rw-------. 1 boinc boinc        95 Mar 11 10:08 pilot_heartbeat.json
[2026-03-11 10:08:36] -rw-r--r--. 1 boinc boinc      8192 Mar 11 10:08 boinc_mmap_file
[2026-03-11 10:08:36] -rw-r--r--. 1 boinc boinc        28 Mar 11 10:08 wrapper_checkpoint.txt
[2026-03-11 10:08:36] -rw-------. 1 boinc boinc      4881 Mar 11 10:08 pilotlog.txt
[2026-03-11 10:08:36] -rw-------. 1 boinc boinc   1676349 Mar 11 10:08 log.48700890._001319.job.log.1
[2026-03-11 10:08:36] -rw-------. 1 boinc boinc       357 Mar 11 10:08 output.list
[2026-03-11 10:08:36] -rw-r--r--. 1 boinc boinc       620 Mar 11 10:08 runtime_log
[2026-03-11 10:08:36] -rw-------. 1 boinc boinc   2129920 Mar 11 10:08 result.tar.gz
[2026-03-11 10:08:36] -rw-------. 1 boinc boinc       654 Mar 11 10:08 sAHMDmRlMH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmEFELDmbXGP4n.diag
[2026-03-11 10:08:36] -rw-r--r--. 1 boinc boinc      8832 Mar 11 10:08 runtime_log.err
[2026-03-11 10:08:36] -rw-r--r--. 1 boinc boinc     20737 Mar 11 10:08 stderr.txt
[2026-03-11 10:08:36] HITS file was successfully produced:
[2026-03-11 10:08:36] -rw-------. 1 boinc boinc 150784893 Mar 11 10:06 shared/HITS.pool.root.1
[2026-03-11 10:08:36]  *** Contents of shared directory: ***
[2026-03-11 10:08:36] total 333784
[2026-03-11 10:08:36] -rw-r--r--. 2 boinc boinc 188262431 Mar 11 06:44 ATLAS.root_0
[2026-03-11 10:08:36] -rw-r--r--. 2 boinc boinc    597929 Mar 11 06:44 input.tar.gz
[2026-03-11 10:08:36] -rw-r--r--. 2 boinc boinc     15845 Mar 11 06:44 start_atlas.sh
[2026-03-11 10:08:36] -rw-------. 1 boinc boinc 150784893 Mar 11 10:06 HITS.pool.root.1
[2026-03-11 10:08:36] -rw-------. 1 boinc boinc   2129920 Mar 11 10:08 result.tar.gz
10:08:37 (21781): run_atlas exited; CPU time 42560.140356
10:08:37 (21781): called boinc_finish(0)

</stderr_txt>
]]>

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