Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:49:42 (3917883): wrapper (7.7.26015): starting
18:49:42 (3917883): wrapper: running run_atlas (--nthreads 8)
[2026-03-10 18:49:42] Arguments: --nthreads 8
[2026-03-10 18:49:42] Threads: 8
[2026-03-10 18:49:42] Checking for CVMFS
[2026-03-10 18:49:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-10 18:49:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-10 18:49:44] Running cvmfs_config stat atlas.cern.ch
[2026-03-10 18:49:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-10 18:49:45] 2.13.3.0 12257 180382 764912 157132 0 235 22579254 32935936 57005 16776704 0 1080271141 99.705 791936828 22201 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-10 18:49:45] CVMFS is ok
[2026-03-10 18:49:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 18:49:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 18:49:45] Further information can be found at the LHC@home message board.
[2026-03-10 18:49:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 18:49:45] Checking for apptainer binary...
[2026-03-10 18:49:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-10 18:49:45] Running /usr/bin/apptainer --version
[2026-03-10 18:49:45] apptainer version 1.4.5-2.el9
[2026-03-10 18:49:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 18:49:46] c-1-3.aglt2.org
[2026-03-10 18:49:46] apptainer works
[2026-03-10 18:49:47] Set ATHENA_PROC_NUMBER=8
[2026-03-10 18:49:47] Set ATHENA_CORE_NUMBER=8
[2026-03-10 18:49:47] Starting ATLAS job with PandaID=7036047796
[2026-03-10 18:49:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 02:36:02]  *** The last 200 lines of the pilot log: ***
[2026-03-11 02:36:02] 2026-03-11 06:34:38,926 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-11 02:36:02] 2026-03-11 06:34:38,930 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-11 02:36:02] 2026-03-11 06:34:38,944 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-11 02:36:02] 2026-03-11 06:34:38,986 | INFO     | fitting pss+swap vs Time
[2026-03-11 02:36:02] 2026-03-11 06:34:38,987 | INFO     | sum of square deviations: 28825826079.297974
[2026-03-11 02:36:02] 2026-03-11 06:34:39,056 | INFO     | sum of deviations: 238908650884.91376
[2026-03-11 02:36:02] 2026-03-11 06:34:39,056 | INFO     | mean x: 1773197009.6754966
[2026-03-11 02:36:02] 2026-03-11 06:34:39,056 | INFO     | mean y: 2489997.271523179
[2026-03-11 02:36:02] 2026-03-11 06:34:39,057 | INFO     | intersect: -14693779388.707281
[2026-03-11 02:36:02] 2026-03-11 06:34:39,057 | INFO     | chi2: 4.863529217079962
[2026-03-11 02:36:02] 2026-03-11 06:34:39,058 | INFO     | sum of square deviations: 27881938916.991
[2026-03-11 02:36:02] 2026-03-11 06:34:39,158 | INFO     | sum of deviations: 264433226742.3839
[2026-03-11 02:36:02] 2026-03-11 06:34:39,158 | INFO     | mean x: 1773196857.1830356
[2026-03-11 02:36:02] 2026-03-11 06:34:39,158 | INFO     | mean y: 2494079.129464286
[2026-03-11 02:36:02] 2026-03-11 06:34:39,158 | INFO     | intersect: -16814563299.495863
[2026-03-11 02:36:02] 2026-03-11 06:34:39,159 | INFO     | chi2: 4.17906447596065
[2026-03-11 02:36:02] 2026-03-11 06:34:39,159 | INFO     | current chi2=4.17906447596065 (change=14.073416865998823 %)
[2026-03-11 02:36:02] 2026-03-11 06:34:39,159 | INFO     | right removable region: 447
[2026-03-11 02:36:02] 2026-03-11 06:34:39,160 | INFO     | sum of square deviations: 27881752256.990993
[2026-03-11 02:36:02] 2026-03-11 06:34:39,261 | INFO     | sum of deviations: 109788310423.69655
[2026-03-11 02:36:02] 2026-03-11 06:34:39,262 | INFO     | mean x: 1773197162.1830356
[2026-03-11 02:36:02] 2026-03-11 06:34:39,262 | INFO     | mean y: 2510831.723214286
[2026-03-11 02:36:02] 2026-03-11 06:34:39,262 | INFO     | intersect: -6979701716.821195
[2026-03-11 02:36:02] 2026-03-11 06:34:39,262 | INFO     | chi2: 1.8661032277374074
[2026-03-11 02:36:02] 2026-03-11 06:34:39,262 | INFO     | current chi2=1.8661032277374074 (change=61.630677139063096 %)
[2026-03-11 02:36:02] 2026-03-11 06:34:39,263 | INFO     | sum of square deviations: 26958625102.12207
[2026-03-11 02:36:02] 2026-03-11 06:34:39,327 | INFO     | sum of deviations: 57331123335.62752
[2026-03-11 02:36:02] 2026-03-11 06:34:39,327 | INFO     | mean x: 1773197314.6817155
[2026-03-11 02:36:02] 2026-03-11 06:34:39,327 | INFO     | mean y: 2519472.8058690745
[2026-03-11 02:36:02] 2026-03-11 06:34:39,328 | INFO     | intersect: -3768421870.134456
[2026-03-11 02:36:02] 2026-03-11 06:34:39,328 | INFO     | chi2: 1.313247389681199
[2026-03-11 02:36:02] 2026-03-11 06:34:39,328 | INFO     | current chi2=1.313247389681199 (change=29.626219484467057 %)
[2026-03-11 02:36:02] 2026-03-11 06:34:39,329 | INFO     | sum of square deviations: 26056049306.020477
[2026-03-11 02:36:02] 2026-03-11 06:34:39,333 | INFO     | sum of deviations: 24249481606.534283
[2026-03-11 02:36:02] 2026-03-11 06:34:39,333 | INFO     | mean x: 1773197467.1849315
[2026-03-11 02:36:02] 2026-03-11 06:34:39,333 | INFO     | mean y: 2525070.4748858446
[2026-03-11 02:36:02] 2026-03-11 06:34:39,333 | INFO     | intersect: -1647729688.4197733
[2026-03-11 02:36:02] 2026-03-11 06:34:39,334 | INFO     | chi2: 1.1155085523637343
[2026-03-11 02:36:02] 2026-03-11 06:34:39,334 | INFO     | current chi2=1.1155085523637343 (change=15.057241984350513 %)
[2026-03-11 02:36:02] 2026-03-11 06:34:39,334 | INFO     | left removable region: 30
[2026-03-11 02:36:02] 2026-03-11 06:34:39,335 | INFO     | sum of square deviations: 22485142876.719482
[2026-03-11 02:36:02] 2026-03-11 06:34:39,338 | INFO     | sum of deviations: -22006753308.870518
[2026-03-11 02:36:02] 2026-03-11 06:34:39,338 | INFO     | mean x: 1773197741.705036
[2026-03-11 02:36:02] 2026-03-11 06:34:39,338 | INFO     | mean y: 2542837.366906475
[2026-03-11 02:36:02] 2026-03-11 06:34:39,339 | INFO     | intersect: 1738014365.5443726
[2026-03-11 02:36:02] 2026-03-11 06:34:39,339 | INFO     | chi2: 0.023207907725148875
[2026-03-11 02:36:02] 2026-03-11 06:34:39,339 | INFO     | current memory leak: -0.98 B/s (using 417 data points, chi2=0.02)
[2026-03-11 02:36:02] 2026-03-11 06:34:39,340 | INFO     | could have reported an average CPU frequency of 2804 MHz (19 samples)
[2026-03-11 02:36:02] 2026-03-11 06:34:39,340 | INFO     | ..............................
[2026-03-11 02:36:02] 2026-03-11 06:34:39,340 | INFO     | . Timing measurements:
[2026-03-11 02:36:02] 2026-03-11 06:34:39,340 | INFO     | . get job = 0 s
[2026-03-11 02:36:02] 2026-03-11 06:34:39,340 | INFO     | . initial setup = 47 s
[2026-03-11 02:36:02] 2026-03-11 06:34:39,340 | INFO     | . payload setup = 55 s
[2026-03-11 02:36:02] 2026-03-11 06:34:39,340 | INFO     | . stage-in = 1 s
[2026-03-11 02:36:02] 2026-03-11 06:34:39,341 | INFO     | . payload execution = 27670 s
[2026-03-11 02:36:02] 2026-03-11 06:34:39,341 | INFO     | . stage-out = 14 s
[2026-03-11 02:36:02] 2026-03-11 06:34:39,341 | INFO     | . log creation = 1 s
[2026-03-11 02:36:02] 2026-03-11 06:34:39,341 | INFO     | ..............................
[2026-03-11 02:36:02] 2026-03-11 06:34:41,050 | INFO     | 
[2026-03-11 02:36:02] 2026-03-11 06:34:41,050 | INFO     | job summary report
[2026-03-11 02:36:02] 2026-03-11 06:34:41,050 | INFO     | --------------------------------------------------
[2026-03-11 02:36:02] 2026-03-11 06:34:41,050 | INFO     | PanDA job id: 7036047796
[2026-03-11 02:36:02] 2026-03-11 06:34:41,050 | INFO     | task id: 48850168
[2026-03-11 02:36:02] 2026-03-11 06:34:41,050 | INFO     | errors: (none)
[2026-03-11 02:36:02] 2026-03-11 06:34:41,050 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-11 02:36:02] 2026-03-11 06:34:41,051 | INFO     | pilot state: finished 
[2026-03-11 02:36:02] 2026-03-11 06:34:41,051 | INFO     | transexitcode: 0
[2026-03-11 02:36:02] 2026-03-11 06:34:41,051 | INFO     | exeerrorcode: 0
[2026-03-11 02:36:02] 2026-03-11 06:34:41,051 | INFO     | exeerrordiag: 
[2026-03-11 02:36:02] 2026-03-11 06:34:41,051 | INFO     | exitcode: 0
[2026-03-11 02:36:02] 2026-03-11 06:34:41,051 | INFO     | exitmsg: OK
[2026-03-11 02:36:02] 2026-03-11 06:34:41,051 | INFO     | cpuconsumptiontime: 45162 s
[2026-03-11 02:36:02] 2026-03-11 06:34:41,076 | INFO     | nevents: 400
[2026-03-11 02:36:02] 2026-03-11 06:34:41,076 | INFO     | neventsw: 0
[2026-03-11 02:36:02] 2026-03-11 06:34:41,076 | INFO     | pid: 3932481
[2026-03-11 02:36:02] 2026-03-11 06:34:41,076 | INFO     | pgrp: 3932481
[2026-03-11 02:36:02] 2026-03-11 06:34:41,076 | INFO     | corecount: 8
[2026-03-11 02:36:02] 2026-03-11 06:34:41,076 | INFO     | event service: False
[2026-03-11 02:36:02] 2026-03-11 06:34:41,077 | INFO     | sizes: {0: 2279199, 1: 2279884, 2: 2279884, 3: 2243595, 5: 2280401, 6: 2280429, 27731: 2316025, 27732: 2316024, 27750: 2325078, 27751: 2325134, 27755: 2325356}
[2026-03-11 02:36:02] 2026-03-11 06:34:41,077 | INFO     | --------------------------------------------------
[2026-03-11 02:36:02] 2026-03-11 06:34:41,077 | INFO     | 
[2026-03-11 02:36:02] 2026-03-11 06:34:41,077 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-03-11 02:36:02] 2026-03-11 06:34:41,366 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-11 02:36:02] 2026-03-11 06:34:41,367 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-11 02:36:02] 2026-03-11 06:34:41,367 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-11 02:36:02] 2026-03-11 06:34:41,367 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-11 02:36:02] 2026-03-11 06:34:41,367 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-11 02:36:02] 2026-03-11 06:34:41,367 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-11 02:36:02] 2026-03-11 06:34:41,367 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-11 02:36:02] 2026-03-11 06:34:41,367 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-11 02:36:02] 2026-03-11 06:34:41,367 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-11 02:36:02] 2026-03-11 06:34:41,367 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-11 02:36:02] 2026-03-11 06:34:41,367 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-11 02:36:02] 2026-03-11 06:34:41,367 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-11 02:36:02] 2026-03-11 06:34:41,368 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-11 02:36:02] 2026-03-11 06:34:41,368 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-11 02:36:02] 2026-03-11 06:34:41,368 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-11 02:36:02] 2026-03-11 06:34:41,368 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-11 02:36:02] 2026-03-11 06:34:41,368 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-11 02:36:02] 2026-03-11 06:34:41,368 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-11 02:36:02] 2026-03-11 06:34:41,368 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-11 02:36:02] 2026-03-11 06:34:41,368 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-11 02:36:02] 2026-03-11 06:34:41,368 | INFO     | job 7036047796 has completed (purged errors)
[2026-03-11 02:36:02] 2026-03-11 06:34:41,368 | INFO     | overall cleanup function is called
[2026-03-11 02:36:02] 2026-03-11 06:34:42,395 | INFO     | --- collectZombieJob: --- 10, [3932481]
[2026-03-11 02:36:02] 2026-03-11 06:34:42,395 | INFO     | zombie collector waiting for pid 3932481
[2026-03-11 02:36:02] 2026-03-11 06:34:42,395 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-11 02:36:02] 2026-03-11 06:34:42,395 | INFO     | collected zombie processes
[2026-03-11 02:36:02] 2026-03-11 06:34:42,395 | INFO     | will attempt to kill all subprocesses of pid=3932481
[2026-03-11 02:36:02] 2026-03-11 06:34:56,030 | INFO     | PID=3924954 has CPU usage=11.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-11 02:36:02] 2026-03-11 06:34:56,030 | INFO     | .. there are 85 such processes running
[2026-03-11 02:36:02] 2026-03-11 06:34:56,075 | INFO     | number of running child processes to parent process 3932481: 1
[2026-03-11 02:36:02] 2026-03-11 06:34:56,075 | INFO     | maximum number of monitored processes: 6
[2026-03-11 02:36:02] 2026-03-11 06:34:56,075 | INFO     | aborting job monitoring since job object (job id=7036047796) has expired
[2026-03-11 02:36:02] 2026-03-11 06:34:59,094 | INFO     | process IDs to be killed: [3932481] (in reverse order)
[2026-03-11 02:36:02] 2026-03-11 06:34:59,616 | WARNING  | found no corresponding commands to process id(s)
[2026-03-11 02:36:02] 2026-03-11 06:34:59,617 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-11 02:36:02] 2026-03-11 06:34:59,746 | INFO     | did not find any defunct processes belonging to 3932481
[2026-03-11 02:36:02] 2026-03-11 06:34:59,873 | INFO     | did not find any defunct processes belonging to 3932481
[2026-03-11 02:36:02] 2026-03-11 06:34:59,874 | INFO     | ready for new job
[2026-03-11 02:36:02] 2026-03-11 06:34:59,874 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-11 02:36:02] 2026-03-11 06:34:59,877 | INFO     | **************************************
[2026-03-11 02:36:02] 2026-03-11 06:34:59,877 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-11 02:36:02] 2026-03-11 06:34:59,877 | INFO     | **************************************
[2026-03-11 02:36:02] 2026-03-11 06:34:59,877 | INFO     | 
[2026-03-11 02:36:02] 2026-03-11 06:34:59,903 | INFO     | architecture information:
[2026-03-11 02:36:02] 2026-03-11 06:34:59,910 | INFO     | executing command: cat /etc/os-release
[2026-03-11 02:36:02] 2026-03-11 06:34:59,994 | INFO     | cat /etc/os-release:
[2026-03-11 02:36:02] NAME="CentOS Linux"
[2026-03-11 02:36:02] VERSION="7 (Core)"
[2026-03-11 02:36:02] ID="centos"
[2026-03-11 02:36:02] ID_LIKE="rhel fedora"
[2026-03-11 02:36:02] VERSION_ID="7"
[2026-03-11 02:36:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-11 02:36:02] ANSI_COLOR="0;31"
[2026-03-11 02:36:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-11 02:36:02] HOME_URL="https://www.centos.org/"
[2026-03-11 02:36:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-11 02:36:02] 
[2026-03-11 02:36:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-11 02:36:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-11 02:36:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-11 02:36:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-11 02:36:02] 
[2026-03-11 02:36:02] 2026-03-11 06:35:00,002 | INFO     | **************************************
[2026-03-11 02:36:02] 2026-03-11 06:35:00,506 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-03-11 02:36:02] 2026-03-11 06:35:00,719 | INFO     | sufficient remaining disk space (73656172544 B)
[2026-03-11 02:36:02] 2026-03-11 06:35:00,723 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-11 02:36:02] 2026-03-11 06:35:00,723 | INFO     | current server update state: UPDATING_FINAL
[2026-03-11 02:36:02] 2026-03-11 06:35:00,723 | INFO     | update_server=False
[2026-03-11 02:36:02] 2026-03-11 06:35:00,723 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-11 02:36:02] 2026-03-11 06:35:00,729 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 02:36:02] 2026-03-11 06:35:01,108 | INFO     | all job control threads have been joined
[2026-03-11 02:36:02] 2026-03-11 06:35:01,129 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-11 02:36:02] 2026-03-11 06:35:01,129 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-11 02:36:02] 2026-03-11 06:35:01,129 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-11 02:36:02] 2026-03-11 06:35:01,129 | INFO     | will abort loop
[2026-03-11 02:36:02] 2026-03-11 06:35:01,403 | INFO     | all data control threads have been joined
[2026-03-11 02:36:02] 2026-03-11 06:35:01,536 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 02:36:02] 2026-03-11 06:35:01,730 | INFO     | [job] retrieve thread has finished
[2026-03-11 02:36:02] 2026-03-11 06:35:01,823 | INFO     | [job] validate thread has finished
[2026-03-11 02:36:02] 2026-03-11 06:35:02,031 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 02:36:02] 2026-03-11 06:35:02,038 | INFO     | [data] copytool_in thread has finished
[2026-03-11 02:36:02] 2026-03-11 06:35:02,047 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 02:36:02] 2026-03-11 06:35:02,056 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 02:36:02] 2026-03-11 06:35:02,060 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 02:36:02] 2026-03-11 06:35:02,065 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 02:36:02] 2026-03-11 06:35:02,069 | INFO     | [payload] failed_post thread has finished
[2026-03-11 02:36:02] 2026-03-11 06:35:02,114 | INFO     | [job] control thread has finished
[2026-03-11 02:36:02] 2026-03-11 06:35:02,135 | INFO     | [job] job monitor thread has finished
[2026-03-11 02:36:02] 2026-03-11 06:35:02,194 | INFO     | all payload control threads have been joined
[2026-03-11 02:36:02] 2026-03-11 06:35:02,283 | INFO     | [payload] validate_post thread has finished
[2026-03-11 02:36:02] 2026-03-11 06:35:02,409 | INFO     | [data] control thread has finished
[2026-03-11 02:36:02] 2026-03-11 06:35:02,736 | INFO     | [data] copytool_out thread has finished
[2026-03-11 02:36:02] 2026-03-11 06:35:03,066 | INFO     | [job] queue monitor thread has finished
[2026-03-11 02:36:02] 2026-03-11 06:35:03,218 | INFO     | [payload] control thread has finished
[2026-03-11 02:36:02] 2026-03-11 06:35:05,599 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 02:36:02] 2026-03-11 06:35:35,758 | INFO     | PID=3924954 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-11 02:36:02] 2026-03-11 06:35:35,758 | INFO     | .. there are 85 such processes running
[2026-03-11 02:36:02] 2026-03-11 06:35:35,760 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 02:36:02] 2026-03-11 06:35:35,760 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 02:36:02] 2026-03-11 06:35:35,762 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 02:36:02] 2026-03-11 06:35:52,399 | INFO     | [monitor] cgroup control has ended
[2026-03-11 02:36:02] 2026-03-11 06:35:53,214 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140396992513856)>', '<ExcThread(monitor, started 140396357211904)>']
[2026-03-11 02:36:02] 2026-03-11 06:35:53,926 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 02:36:02] 2026-03-11 06:35:53,926 | INFO     | [monitor] control thread has ended
[2026-03-11 02:36:02] 2026-03-11 06:35:58,240 | INFO     | all workflow threads have been joined
[2026-03-11 02:36:02] 2026-03-11 06:35:58,240 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 02:36:02] 2026-03-11 06:35:58,241 | INFO     | traces error code: 0
[2026-03-11 02:36:02] 2026-03-11 06:35:58,241 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 02:36:02] 2026-03-11 06:36:01,300 [wrapper] ==== pilot stdout END ====
[2026-03-11 02:36:02] 2026-03-11 06:36:01,325 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 02:36:02] 2026-03-11 06:36:01,374 [wrapper] pilotpid: 3924954
[2026-03-11 02:36:02] 2026-03-11 06:36:01,429 [wrapper] Pilot exit status: 0
[2026-03-11 02:36:02] 2026-03-11 06:36:01,682 [wrapper] pandaids: 7036047796
[2026-03-11 02:36:02] 2026-03-11 06:36:01,928 [wrapper] cleanup supervisor_pilot 2254041 3924955
[2026-03-11 02:36:02] 2026-03-11 06:36:01,957 [wrapper] Test setup, not cleaning
[2026-03-11 02:36:02] 2026-03-11 06:36:02,004 [wrapper] apfmon messages muted
[2026-03-11 02:36:02] 2026-03-11 06:36:02,014 [wrapper] ==== wrapper stdout END ====
[2026-03-11 02:36:02] 2026-03-11 06:36:02,033 [wrapper] ==== wrapper stderr END ====
[2026-03-11 02:36:02]  *** Error codes and diagnostics ***
[2026-03-11 02:36:02]     "exeErrorCode": 0,
[2026-03-11 02:36:02]     "exeErrorDiag": "",
[2026-03-11 02:36:02]     "pilotErrorCode": 0,
[2026-03-11 02:36:02]     "pilotErrorDiag": "",
[2026-03-11 02:36:02]  *** Listing of results directory ***
[2026-03-11 02:36:02] total 457584
[2026-03-11 02:36:02] -rw-r--r--. 1 boincer umatlas    584627 Mar  2 12:50 pilot3.tar.gz
[2026-03-11 02:36:02] -rwx------. 1 boincer umatlas     36322 Mar  2 12:53 runpilot2-wrapper.sh
[2026-03-11 02:36:02] -rw-r--r--. 1 boincer umatlas      5111 Mar  2 12:53 queuedata.json
[2026-03-11 02:36:02] -rw-r--r--. 1 boincer umatlas       100 Mar 10 18:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 02:36:02] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 10 18:49 run_atlas
[2026-03-11 02:36:02] -rw-r--r--. 1 boincer umatlas       105 Mar 10 18:49 job.xml
[2026-03-11 02:36:02] -rw-r--r--. 2 boincer umatlas 267261376 Mar 10 18:49 EVNT.48458362._000003.pool.root.1
[2026-03-11 02:36:02] -rw-r--r--. 2 boincer umatlas     15845 Mar 10 18:49 start_atlas.sh
[2026-03-11 02:36:02] drwxrwx--x. 2 boincer umatlas      4096 Mar 10 18:49 shared
[2026-03-11 02:36:02] -rw-r--r--. 2 boincer umatlas    597953 Mar 10 18:49 input.tar.gz
[2026-03-11 02:36:02] -rw-r--r--. 1 boincer umatlas         0 Mar 10 18:49 boinc_lockfile
[2026-03-11 02:36:02] -rw-r--r--. 1 boincer umatlas      2604 Mar 10 18:49 pandaJob.out
[2026-03-11 02:36:02] -rw-------. 1 boincer umatlas        57 Mar 10 18:49 setup.sh.local
[2026-03-11 02:36:02] -rw-------. 1 boincer umatlas   1006644 Mar 10 18:51 agis_schedconf.cvmfs.json
[2026-03-11 02:36:02] -rw-------. 1 boincer umatlas       437 Mar 10 18:51 workernode_map.json
[2026-03-11 02:36:02] drwx------. 5 boincer umatlas      4096 Mar 10 18:52 pilot3
[2026-03-11 02:36:02] -rw-r--r--. 1 boincer umatlas      6839 Mar 11 02:30 init_data.xml
[2026-03-11 02:36:02] -rw-------. 1 boincer umatlas 190640364 Mar 11 02:32 HITS.48850168._000075.pool.root.1
[2026-03-11 02:36:02] -rw-r--r--. 1 boincer umatlas       530 Mar 11 02:32 boinc_task_state.xml
[2026-03-11 02:36:02] -rw-------. 1 boincer umatlas      1042 Mar 11 02:34 memory_monitor_summary.json
[2026-03-11 02:36:02] -rw-------. 1 boincer umatlas   1511578 Mar 11 02:34 agis_ddmendpoints.agis.ALL.json
[2026-03-11 02:36:02] -rw-------. 1 boincer umatlas    590089 Mar 11 02:34 log.48850168._000075.job.log.tgz.1
[2026-03-11 02:36:02] -rw-------. 1 boincer umatlas      6371 Mar 11 02:34 heartbeat.json
[2026-03-11 02:36:02] -rw-------. 1 boincer umatlas        95 Mar 11 02:35 pilot_heartbeat.json
[2026-03-11 02:36:02] -rw-r--r--. 1 boincer umatlas        28 Mar 11 02:35 wrapper_checkpoint.txt
[2026-03-11 02:36:02] -rw-------. 1 boincer umatlas      5006 Mar 11 02:35 pilotlog.txt
[2026-03-11 02:36:02] -rw-------. 1 boincer umatlas   2770507 Mar 11 02:36 log.48850168._000075.job.log.1
[2026-03-11 02:36:02] -rw-------. 1 boincer umatlas       357 Mar 11 02:36 output.list
[2026-03-11 02:36:02] -rw-r--r--. 1 boincer umatlas       620 Mar 11 02:36 runtime_log
[2026-03-11 02:36:02] -rw-------. 1 boincer umatlas   3379200 Mar 11 02:36 result.tar.gz
[2026-03-11 02:36:02] -rw-r--r--. 1 boincer umatlas      9327 Mar 11 02:36 runtime_log.err
[2026-03-11 02:36:02] -rw-------. 1 boincer umatlas       655 Mar 11 02:36 auBLDmrdMH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmKDELDmoHwWrm.diag
[2026-03-11 02:36:02] -rw-r--r--. 1 boincer umatlas     21285 Mar 11 02:36 stderr.txt
[2026-03-11 02:36:02] -rw-r--r--. 1 boincer umatlas      8192 Mar 11 02:36 boinc_mmap_file
[2026-03-11 02:36:02] HITS file was successfully produced:
[2026-03-11 02:36:02] -rw-------. 1 boincer umatlas 190640364 Mar 11 02:32 shared/HITS.pool.root.1
[2026-03-11 02:36:02]  *** Contents of shared directory: ***
[2026-03-11 02:36:02] total 451080
[2026-03-11 02:36:02] -rw-r--r--. 2 boincer umatlas 267261376 Mar 10 18:49 ATLAS.root_0
[2026-03-11 02:36:02] -rw-r--r--. 2 boincer umatlas     15845 Mar 10 18:49 start_atlas.sh
[2026-03-11 02:36:02] -rw-r--r--. 2 boincer umatlas    597953 Mar 10 18:49 input.tar.gz
[2026-03-11 02:36:02] -rw-------. 1 boincer umatlas 190640364 Mar 11 02:32 HITS.pool.root.1
[2026-03-11 02:36:02] -rw-------. 1 boincer umatlas   3379200 Mar 11 02:36 result.tar.gz
02:36:04 (3917883): run_atlas exited; CPU time 46916.333857
02:36:04 (3917883): called boinc_finish(0)

</stderr_txt>
]]>

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