Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:19:55 (2362465): wrapper (7.7.26015): starting
16:19:55 (2362465): wrapper: running run_atlas (--nthreads 12)
[2026-03-10 16:19:55] Arguments: --nthreads 12
[2026-03-10 16:19:55] Threads: 12
[2026-03-10 16:19:55] Checking for CVMFS
[2026-03-10 16:19:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-10 16:19:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-10 16:19:56] Running cvmfs_config stat atlas.cern.ch
[2026-03-10 16:19:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-10 16:19:56] 2.13.3.0 16090 180233 595428 157129 0 195 21861031 32935936 7149 16776704 0 1846628821 99.585 1973630413 50790 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-10 16:19:56] CVMFS is ok
[2026-03-10 16:19:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 16:19:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 16:19:56] Further information can be found at the LHC@home message board.
[2026-03-10 16:19:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 16:19:56] Checking for apptainer binary...
[2026-03-10 16:19:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-10 16:19:56] Running /usr/bin/apptainer --version
[2026-03-10 16:19:56] apptainer version 1.4.5-2.el9
[2026-03-10 16:19:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 16:19:56] c7-9-15.aglt2.org
[2026-03-10 16:19:56] apptainer works
[2026-03-10 16:19:56] Set ATHENA_PROC_NUMBER=12
[2026-03-10 16:19:56] Set ATHENA_CORE_NUMBER=12
[2026-03-10 16:19:56] Starting ATLAS job with PandaID=7048862737
[2026-03-10 16:19:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 17:08:17]  *** The last 200 lines of the pilot log: ***
[2026-03-10 17:08:17]  lfn=log.48997968._001399.job.log.tgz.1
[2026-03-10 17:08:17]  mtime=0
[2026-03-10 17:08:17]  protocol_id=None
[2026-03-10 17:08:17]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-10 17:08:17]  replicas=None
[2026-03-10 17:08:17]  scope=mc23_13p6TeV
[2026-03-10 17:08:17]  status=None
[2026-03-10 17:08:17]  status_code=0
[2026-03-10 17:08:17]  storage_token=
[2026-03-10 17:08:17]  surl=/tmp/boinchome/slots/8/PanDA_Pilot-7048862737/log.48997968._001399.job.log.tgz.1
[2026-03-10 17:08:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/18/c5/log.48997968._001399.job.log.tgz.1
[2026-03-10 17:08:17]  workdir=None
[2026-03-10 17:08:17] ]
[2026-03-10 17:08:17] 2026-03-10 21:07:37,728 | INFO     | transferring file log.48997968._001399.job.log.tgz.1 from /tmp/boinchome/slots/8/PanDA_Pilot-7048862737/log.48997968._001399.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-10 17:08:17] 2026-03-10 21:07:37,728 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/8/PanDA_Pilot-7048862737/log.48997968._001399.job.log.tgz.1 /tmp/boinchome/slots/8/log.48997968._001399.job
[2026-03-10 17:08:17] 2026-03-10 21:07:37,745 | INFO     | adding to output.list: log.48997968._001399.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/18/c5/log.48997968._001399.job.log.tg
[2026-03-10 17:08:17] 2026-03-10 21:07:37,746 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-10 17:08:17] 2026-03-10 21:07:37,746 | INFO     | summary of transferred files:
[2026-03-10 17:08:17] 2026-03-10 21:07:37,746 | INFO     |  -- lfn=log.48997968._001399.job.log.tgz.1, status_code=0, status=transferred
[2026-03-10 17:08:17] 2026-03-10 21:07:37,746 | INFO     | stage-out finished correctly
[2026-03-10 17:08:17] 2026-03-10 21:07:37,989 | INFO     | time since job start (2850s) is within the limit (349056.0s)
[2026-03-10 17:08:17] 2026-03-10 21:07:39,995 | INFO     | time since job start (2852s) is within the limit (349056.0s)
[2026-03-10 17:08:17] 2026-03-10 21:07:40,597 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-10 17:08:17] 2026-03-10 21:07:41,366 | INFO     | PID=2368494 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 17:08:17] 2026-03-10 21:07:41,366 | INFO     | .. there are 11 such processes running
[2026-03-10 17:08:17] 2026-03-10 21:07:42,282 | INFO     | job 7048862737 has state=finished
[2026-03-10 17:08:17] 2026-03-10 21:07:42,282 | INFO     | preparing for final server update for job 7048862737 in state='finished'
[2026-03-10 17:08:17] 2026-03-10 21:07:42,282 | INFO     | reading metadata from: /tmp/boinchome/slots/8/PanDA_Pilot-7048862737/jobReport.json
[2026-03-10 17:08:17] 2026-03-10 21:07:42,284 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/8/workernode_map.json
[2026-03-10 17:08:17] 2026-03-10 21:07:42,284 | INFO     | this job has now completed (state=finished)
[2026-03-10 17:08:17] 2026-03-10 21:07:42,284 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 17:08:17] 2026-03-10 21:07:42,284 | INFO     | log transfer has been attempted: DONE
[2026-03-10 17:08:17] 2026-03-10 21:07:42,284 | INFO     | job 7048862737 has finished - writing final server update
[2026-03-10 17:08:17] 2026-03-10 21:07:42,284 | INFO     | total number of processed events: 400 (read)
[2026-03-10 17:08:17] 2026-03-10 21:07:42,297 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-7048862737/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 17:08:17] 2026-03-10 21:07:42,297 | INFO     | extracted standard info from prmon json
[2026-03-10 17:08:17] 2026-03-10 21:07:42,298 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 17:08:17] 2026-03-10 21:07:42,298 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 17:08:17] 2026-03-10 21:07:42,298 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 17:08:17] 2026-03-10 21:07:42,298 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 17:08:17] 2026-03-10 21:07:42,298 | INFO     | fitting pss+swap vs Time
[2026-03-10 17:08:17] 2026-03-10 21:07:42,299 | INFO     | sum of square deviations: 19832930.0
[2026-03-10 17:08:17] 2026-03-10 21:07:42,299 | INFO     | sum of deviations: -316706510.0
[2026-03-10 17:08:17] 2026-03-10 21:07:42,299 | INFO     | mean x: 1773175521.5
[2026-03-10 17:08:17] 2026-03-10 21:07:42,299 | INFO     | mean y: 2831849.75
[2026-03-10 17:08:17] 2026-03-10 21:07:42,299 | INFO     | intersect: 28318175625.56603
[2026-03-10 17:08:17] 2026-03-10 21:07:42,299 | INFO     | chi2: 0.0005909735298760601
[2026-03-10 17:08:17] 2026-03-10 21:07:42,299 | INFO     | current memory leak: -15.97 B/s (using 40 data points, chi2=0.00)
[2026-03-10 17:08:17] 2026-03-10 21:07:42,299 | INFO     | could have reported an average CPU frequency of 3662 MHz (5 samples)
[2026-03-10 17:08:17] 2026-03-10 21:07:42,299 | INFO     | ..............................
[2026-03-10 17:08:17] 2026-03-10 21:07:42,299 | INFO     | . Timing measurements:
[2026-03-10 17:08:17] 2026-03-10 21:07:42,299 | INFO     | . get job = 0 s
[2026-03-10 17:08:17] 2026-03-10 21:07:42,299 | INFO     | . initial setup = 5 s
[2026-03-10 17:08:17] 2026-03-10 21:07:42,299 | INFO     | . payload setup = 4 s
[2026-03-10 17:08:17] 2026-03-10 21:07:42,299 | INFO     | . stage-in = 0 s
[2026-03-10 17:08:17] 2026-03-10 21:07:42,299 | INFO     | . payload execution = 2830 s
[2026-03-10 17:08:17] 2026-03-10 21:07:42,299 | INFO     | . stage-out = 0 s
[2026-03-10 17:08:17] 2026-03-10 21:07:42,299 | INFO     | . log creation = 0 s
[2026-03-10 17:08:17] 2026-03-10 21:07:42,300 | INFO     | ..............................
[2026-03-10 17:08:17] 2026-03-10 21:07:42,350 | INFO     | 
[2026-03-10 17:08:17] 2026-03-10 21:07:42,350 | INFO     | job summary report
[2026-03-10 17:08:17] 2026-03-10 21:07:42,350 | INFO     | --------------------------------------------------
[2026-03-10 17:08:17] 2026-03-10 21:07:42,350 | INFO     | PanDA job id: 7048862737
[2026-03-10 17:08:17] 2026-03-10 21:07:42,350 | INFO     | task id: 48997968
[2026-03-10 17:08:17] 2026-03-10 21:07:42,350 | INFO     | errors: (none)
[2026-03-10 17:08:17] 2026-03-10 21:07:42,350 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 17:08:17] 2026-03-10 21:07:42,350 | INFO     | pilot state: finished 
[2026-03-10 17:08:17] 2026-03-10 21:07:42,350 | INFO     | transexitcode: 0
[2026-03-10 17:08:17] 2026-03-10 21:07:42,350 | INFO     | exeerrorcode: 0
[2026-03-10 17:08:17] 2026-03-10 21:07:42,350 | INFO     | exeerrordiag: 
[2026-03-10 17:08:17] 2026-03-10 21:07:42,350 | INFO     | exitcode: 0
[2026-03-10 17:08:17] 2026-03-10 21:07:42,350 | INFO     | exitmsg: OK
[2026-03-10 17:08:17] 2026-03-10 21:07:42,350 | INFO     | cpuconsumptiontime: 31208 s
[2026-03-10 17:08:17] 2026-03-10 21:07:42,350 | INFO     | nevents: 400
[2026-03-10 17:08:17] 2026-03-10 21:07:42,350 | INFO     | neventsw: 0
[2026-03-10 17:08:17] 2026-03-10 21:07:42,350 | INFO     | pid: 2380769
[2026-03-10 17:08:17] 2026-03-10 21:07:42,350 | INFO     | pgrp: 2380769
[2026-03-10 17:08:17] 2026-03-10 21:07:42,351 | INFO     | corecount: 12
[2026-03-10 17:08:17] 2026-03-10 21:07:42,351 | INFO     | event service: False
[2026-03-10 17:08:17] 2026-03-10 21:07:42,351 | INFO     | sizes: {0: 2280235, 11: 2280235, 2838: 2305676, 2839: 2314674, 2842: 2314730, 2843: 2314956}
[2026-03-10 17:08:17] 2026-03-10 21:07:42,351 | INFO     | --------------------------------------------------
[2026-03-10 17:08:17] 2026-03-10 21:07:42,351 | INFO     | 
[2026-03-10 17:08:17] 2026-03-10 21:07:42,351 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2026-03-10 17:08:17] 2026-03-10 21:07:42,366 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 17:08:17] 2026-03-10 21:07:42,366 | INFO     | time since job start (2855s) is within the limit (349056.0s)
[2026-03-10 17:08:17] 2026-03-10 21:07:42,366 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 17:08:17] 2026-03-10 21:07:42,366 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 17:08:17] 2026-03-10 21:07:42,367 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 17:08:17] 2026-03-10 21:07:42,367 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 17:08:17] 2026-03-10 21:07:42,367 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 17:08:17] 2026-03-10 21:07:42,367 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 17:08:17] 2026-03-10 21:07:42,367 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 17:08:17] 2026-03-10 21:07:42,367 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 17:08:17] 2026-03-10 21:07:42,367 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 17:08:17] 2026-03-10 21:07:42,367 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 17:08:17] 2026-03-10 21:07:42,367 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 17:08:17] 2026-03-10 21:07:42,367 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 17:08:17] 2026-03-10 21:07:42,367 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 17:08:17] 2026-03-10 21:07:42,367 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 17:08:17] 2026-03-10 21:07:42,367 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 17:08:17] 2026-03-10 21:07:42,367 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 17:08:17] 2026-03-10 21:07:42,367 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 17:08:17] 2026-03-10 21:07:42,367 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 17:08:17] 2026-03-10 21:07:42,367 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 17:08:17] 2026-03-10 21:07:42,367 | INFO     | job 7048862737 has completed (purged errors)
[2026-03-10 17:08:17] 2026-03-10 21:07:42,367 | INFO     | overall cleanup function is called
[2026-03-10 17:08:17] 2026-03-10 21:07:43,375 | INFO     | --- collectZombieJob: --- 10, [2380769]
[2026-03-10 17:08:17] 2026-03-10 21:07:43,375 | INFO     | zombie collector waiting for pid 2380769
[2026-03-10 17:08:17] 2026-03-10 21:07:43,375 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 17:08:17] 2026-03-10 21:07:43,376 | INFO     | collected zombie processes
[2026-03-10 17:08:17] 2026-03-10 21:07:43,376 | INFO     | will attempt to kill all subprocesses of pid=2380769
[2026-03-10 17:08:17] 2026-03-10 21:07:43,881 | WARNING  | process 2380769 can no longer be monitored (due to stat problems) - aborting
[2026-03-10 17:08:17] 2026-03-10 21:07:44,246 | INFO     | process IDs to be killed: [2380769] (in reverse order)
[2026-03-10 17:08:17] 2026-03-10 21:07:44,351 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 17:08:17] 2026-03-10 21:07:44,351 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 17:08:17] 2026-03-10 21:07:44,382 | INFO     | using path: /tmp/boinchome/slots/8/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 17:08:17] 2026-03-10 21:07:44,390 | INFO     | did not find any defunct processes belonging to 2380769
[2026-03-10 17:08:17] 2026-03-10 21:07:44,422 | INFO     | did not find any defunct processes belonging to 2380769
[2026-03-10 17:08:17] 2026-03-10 21:07:44,423 | INFO     | ready for new job
[2026-03-10 17:08:17] 2026-03-10 21:07:44,423 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 17:08:17] 2026-03-10 21:07:44,424 | INFO     | **************************************
[2026-03-10 17:08:17] 2026-03-10 21:07:44,424 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 17:08:17] 2026-03-10 21:07:44,424 | INFO     | **************************************
[2026-03-10 17:08:17] 2026-03-10 21:07:44,424 | INFO     | 
[2026-03-10 17:08:17] 2026-03-10 21:07:44,430 | INFO     | architecture information:
[2026-03-10 17:08:17] 2026-03-10 21:07:44,430 | INFO     | executing command: cat /etc/os-release
[2026-03-10 17:08:17] 2026-03-10 21:07:44,444 | INFO     | cat /etc/os-release:
[2026-03-10 17:08:17] NAME="CentOS Linux"
[2026-03-10 17:08:17] VERSION="7 (Core)"
[2026-03-10 17:08:17] ID="centos"
[2026-03-10 17:08:17] ID_LIKE="rhel fedora"
[2026-03-10 17:08:17] VERSION_ID="7"
[2026-03-10 17:08:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 17:08:17] ANSI_COLOR="0;31"
[2026-03-10 17:08:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 17:08:17] HOME_URL="https://www.centos.org/"
[2026-03-10 17:08:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 17:08:17] 
[2026-03-10 17:08:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 17:08:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 17:08:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 17:08:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 17:08:17] 
[2026-03-10 17:08:17] 2026-03-10 21:07:44,444 | INFO     | **************************************
[2026-03-10 17:08:17] 2026-03-10 21:07:44,716 | INFO     | number of running child processes to parent process 2380769: 1
[2026-03-10 17:08:17] 2026-03-10 21:07:44,716 | INFO     | maximum number of monitored processes: 6
[2026-03-10 17:08:17] 2026-03-10 21:07:44,716 | INFO     | aborting job monitoring since job object (job id=7048862737) has expired
[2026-03-10 17:08:17] 2026-03-10 21:07:44,947 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2026-03-10 17:08:17] 2026-03-10 21:07:44,964 | INFO     | sufficient remaining disk space (70929874944 B)
[2026-03-10 17:08:17] 2026-03-10 21:07:44,964 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 17:08:17] 2026-03-10 21:07:44,965 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 17:08:17] 2026-03-10 21:07:44,965 | INFO     | update_server=False
[2026-03-10 17:08:17] 2026-03-10 21:07:44,965 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 17:08:17] 2026-03-10 21:07:44,965 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 17:08:17] 2026-03-10 21:07:44,965 | INFO     | will abort loop
[2026-03-10 17:08:17] 2026-03-10 21:07:45,330 | INFO     | all data control threads have been joined
[2026-03-10 17:08:17] 2026-03-10 21:07:45,811 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 17:08:17] 2026-03-10 21:07:45,864 | INFO     | all job control threads have been joined
[2026-03-10 17:08:17] 2026-03-10 21:07:45,970 | INFO     | [job] retrieve thread has finished
[2026-03-10 17:08:17] 2026-03-10 21:07:45,971 | INFO     | [job] job monitor thread has finished
[2026-03-10 17:08:17] 2026-03-10 21:07:46,143 | INFO     | [payload] validate_post thread has finished
[2026-03-10 17:08:17] 2026-03-10 21:07:46,309 | INFO     | all payload control threads have been joined
[2026-03-10 17:08:17] 2026-03-10 21:07:46,335 | INFO     | [data] control thread has finished
[2026-03-10 17:08:17] 2026-03-10 21:07:46,654 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 17:08:17] 2026-03-10 21:07:46,870 | INFO     | [job] control thread has finished
[2026-03-10 17:08:17] 2026-03-10 21:07:46,936 | INFO     | [payload] failed_post thread has finished
[2026-03-10 17:08:17] 2026-03-10 21:07:46,983 | INFO     | [job] validate thread has finished
[2026-03-10 17:08:17] 2026-03-10 21:07:47,096 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 17:08:17] 2026-03-10 21:07:47,206 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 17:08:17] 2026-03-10 21:07:47,314 | INFO     | [payload] control thread has finished
[2026-03-10 17:08:17] 2026-03-10 21:07:47,328 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 17:08:17] 2026-03-10 21:07:47,360 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 17:08:17] 2026-03-10 21:07:47,432 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 17:08:17] 2026-03-10 21:07:47,433 | INFO     | [data] copytool_in thread has finished
[2026-03-10 17:08:17] 2026-03-10 21:07:47,815 | INFO     | [data] copytool_out thread has finished
[2026-03-10 17:08:17] 2026-03-10 21:07:48,366 | INFO     | [job] queue monitor thread has finished
[2026-03-10 17:08:17] 2026-03-10 21:07:50,659 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 17:08:17] 2026-03-10 21:08:11,997 | INFO     | [monitor] cgroup control has ended
[2026-03-10 17:08:17] 2026-03-10 21:08:12,399 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140053177952064)>', '<ExcThread(monitor, started 140052701112064)>']
[2026-03-10 17:08:17] 2026-03-10 21:08:15,841 | INFO     | PID=2368494 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 17:08:17] 2026-03-10 21:08:15,841 | INFO     | .. there are 11 such processes running
[2026-03-10 17:08:17] 2026-03-10 21:08:15,842 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 17:08:17] 2026-03-10 21:08:15,842 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 17:08:17] 2026-03-10 21:08:15,842 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 17:08:17] 2026-03-10 21:08:15,842 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 17:08:17] 2026-03-10 21:08:15,842 | INFO     | [monitor] control thread has ended
[2026-03-10 17:08:17] 2026-03-10 21:08:17,424 | INFO     | all workflow threads have been joined
[2026-03-10 17:08:17] 2026-03-10 21:08:17,424 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 17:08:17] 2026-03-10 21:08:17,424 | INFO     | traces error code: 0
[2026-03-10 17:08:17] 2026-03-10 21:08:17,425 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 17:08:17] 2026-03-10 21:08:17,511 [wrapper] ==== pilot stdout END ====
[2026-03-10 17:08:17] 2026-03-10 21:08:17,514 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 17:08:17] 2026-03-10 21:08:17,517 [wrapper] pilotpid: 2368494
[2026-03-10 17:08:17] 2026-03-10 21:08:17,520 [wrapper] Pilot exit status: 0
[2026-03-10 17:08:17] 2026-03-10 21:08:17,531 [wrapper] pandaids: 7048862737
[2026-03-10 17:08:17] 2026-03-10 21:08:17,609 [wrapper] cleanup supervisor_pilot 2561721 2368495
[2026-03-10 17:08:17] 2026-03-10 21:08:17,611 [wrapper] Test setup, not cleaning
[2026-03-10 17:08:17] 2026-03-10 21:08:17,614 [wrapper] apfmon messages muted
[2026-03-10 17:08:17] 2026-03-10 21:08:17,616 [wrapper] ==== wrapper stdout END ====
[2026-03-10 17:08:17] 2026-03-10 21:08:17,619 [wrapper] ==== wrapper stderr END ====
[2026-03-10 17:08:17]  *** Error codes and diagnostics ***
[2026-03-10 17:08:17]     "exeErrorCode": 0,
[2026-03-10 17:08:17]     "exeErrorDiag": "",
[2026-03-10 17:08:17]     "pilotErrorCode": 0,
[2026-03-10 17:08:17]     "pilotErrorDiag": "",
[2026-03-10 17:08:17]  *** Listing of results directory ***
[2026-03-10 17:08:17] total 646508
[2026-03-10 17:08:17] -rw-r--r--. 1 boincer umatlas    584627 Mar 10 10:07 pilot3.tar.gz
[2026-03-10 17:08:17] -rwx------. 1 boincer umatlas     36322 Mar 10 10:08 runpilot2-wrapper.sh
[2026-03-10 17:08:17] -rw-r--r--. 1 boincer umatlas      5111 Mar 10 10:09 queuedata.json
[2026-03-10 17:08:17] -rw-r--r--. 1 boincer umatlas       100 Mar 10 16:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 17:08:17] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 10 16:19 run_atlas
[2026-03-10 17:08:17] -rw-r--r--. 1 boincer umatlas       105 Mar 10 16:19 job.xml
[2026-03-10 17:08:17] -rw-r--r--. 2 boincer umatlas 361128916 Mar 10 16:19 EVNT.48997965._000054.pool.root.1
[2026-03-10 17:08:17] -rw-r--r--. 2 boincer umatlas     15845 Mar 10 16:19 start_atlas.sh
[2026-03-10 17:08:17] drwxrwx--x. 2 boincer umatlas      4096 Mar 10 16:19 shared
[2026-03-10 17:08:17] -rw-r--r--. 2 boincer umatlas    597964 Mar 10 16:19 input.tar.gz
[2026-03-10 17:08:17] -rw-r--r--. 1 boincer umatlas         0 Mar 10 16:19 boinc_lockfile
[2026-03-10 17:08:17] -rw-r--r--. 1 boincer umatlas      2563 Mar 10 16:19 pandaJob.out
[2026-03-10 17:08:17] -rw-------. 1 boincer umatlas        57 Mar 10 16:19 setup.sh.local
[2026-03-10 17:08:17] -rw-------. 1 boincer umatlas   1006644 Mar 10 16:20 agis_schedconf.cvmfs.json
[2026-03-10 17:08:17] -rw-------. 1 boincer umatlas   1511578 Mar 10 16:20 agis_ddmendpoints.agis.ALL.json
[2026-03-10 17:08:17] -rw-------. 1 boincer umatlas       431 Mar 10 16:20 workernode_map.json
[2026-03-10 17:08:17] drwx------. 5 boincer umatlas      4096 Mar 10 16:20 pilot3
[2026-03-10 17:08:17] -rw-r--r--. 1 boincer umatlas      7173 Mar 10 17:00 init_data.xml
[2026-03-10 17:08:17] -rw-------. 1 boincer umatlas 295307618 Mar 10 17:07 HITS.48997968._001399.pool.root.1
[2026-03-10 17:08:17] -rw-r--r--. 1 boincer umatlas       529 Mar 10 17:07 boinc_task_state.xml
[2026-03-10 17:08:17] -rw-------. 1 boincer umatlas      1027 Mar 10 17:07 memory_monitor_summary.json
[2026-03-10 17:08:17] -rw-------. 1 boincer umatlas    377443 Mar 10 17:07 log.48997968._001399.job.log.tgz.1
[2026-03-10 17:08:17] -rw-------. 1 boincer umatlas      6326 Mar 10 17:07 heartbeat.json
[2026-03-10 17:08:17] -rw-r--r--. 1 boincer umatlas      8192 Mar 10 17:08 boinc_mmap_file
[2026-03-10 17:08:17] -rw-r--r--. 1 boincer umatlas        27 Mar 10 17:08 wrapper_checkpoint.txt
[2026-03-10 17:08:17] -rw-------. 1 boincer umatlas        95 Mar 10 17:08 pilot_heartbeat.json
[2026-03-10 17:08:17] -rw-------. 1 boincer umatlas      5110 Mar 10 17:08 pilotlog.txt
[2026-03-10 17:08:17] -rw-------. 1 boincer umatlas    445552 Mar 10 17:08 log.48997968._001399.job.log.1
[2026-03-10 17:08:17] -rw-------. 1 boincer umatlas       357 Mar 10 17:08 output.list
[2026-03-10 17:08:17] -rw-r--r--. 1 boincer umatlas       620 Mar 10 17:08 runtime_log
[2026-03-10 17:08:17] -rw-------. 1 boincer umatlas    839680 Mar 10 17:08 result.tar.gz
[2026-03-10 17:08:17] -rw-------. 1 boincer umatlas       648 Mar 10 17:08 ShbMDm1vCK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmIMdLDm2sGsDn.diag
[2026-03-10 17:08:17] -rw-r--r--. 1 boincer umatlas      9338 Mar 10 17:08 runtime_log.err
[2026-03-10 17:08:17] -rw-r--r--. 1 boincer umatlas     21736 Mar 10 17:08 stderr.txt
[2026-03-10 17:08:17] HITS file was successfully produced:
[2026-03-10 17:08:17] -rw-------. 1 boincer umatlas 295307618 Mar 10 17:07 shared/HITS.pool.root.1
[2026-03-10 17:08:17]  *** Contents of shared directory: ***
[2026-03-10 17:08:17] total 642484
[2026-03-10 17:08:17] -rw-r--r--. 2 boincer umatlas 361128916 Mar 10 16:19 ATLAS.root_0
[2026-03-10 17:08:17] -rw-r--r--. 2 boincer umatlas     15845 Mar 10 16:19 start_atlas.sh
[2026-03-10 17:08:17] -rw-r--r--. 2 boincer umatlas    597964 Mar 10 16:19 input.tar.gz
[2026-03-10 17:08:17] -rw-------. 1 boincer umatlas 295307618 Mar 10 17:07 HITS.pool.root.1
[2026-03-10 17:08:17] -rw-------. 1 boincer umatlas    839680 Mar 10 17:08 result.tar.gz
17:08:19 (2362465): run_atlas exited; CPU time 31269.119442
17:08:19 (2362465): called boinc_finish(0)

</stderr_txt>
]]>

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