Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:46:50 (1905483): wrapper (7.7.26015): starting
07:46:50 (1905483): wrapper: running run_atlas (--nthreads 2)
[2026-03-11 07:46:50] Arguments: --nthreads 2
[2026-03-11 07:46:50] Threads: 2
[2026-03-11 07:46:50] Checking for CVMFS
[2026-03-11 07:46:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 07:46:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 07:46:50] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 07:46:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 07:46:50] 2.9.2.0 35068 19534 62312 157145 0 50 30022197 36864000 0 130560 0 5445909 99.976 726749 12632 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-11 07:46:50] CVMFS is ok
[2026-03-11 07:46:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 07:46:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-11 07:46:50] Further information can be found at the LHC@home message board.
[2026-03-11 07:46:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 07:46:50] Checking for apptainer binary...
[2026-03-11 07:46:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 07:46:50] Running /usr/bin/apptainer --version
[2026-03-11 07:46:50] apptainer version 1.4.1-1.1
[2026-03-11 07:46:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 07:46:50] legendA269
[2026-03-11 07:46:50] apptainer works
[2026-03-11 07:46:50] Set ATHENA_PROC_NUMBER=2
[2026-03-11 07:46:50] Set ATHENA_CORE_NUMBER=2
[2026-03-11 07:46:50] Starting ATLAS job with PandaID=7036047870
[2026-03-11 07:46:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 10:47:31]  *** The last 200 lines of the pilot log: ***
[2026-03-11 10:47:31] 2026-03-11 09:47:20,280 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 10:47:31] 2026-03-11 09:47:20,280 | INFO     | aborting loop
[2026-03-11 10:47:31] 2026-03-11 09:47:20,491 | INFO     | all payload control threads have been joined
[2026-03-11 10:47:31] 2026-03-11 09:47:20,640 | INFO     | all job control threads have been joined
[2026-03-11 10:47:31] 2026-03-11 09:47:21,056 | INFO     | all data control threads have been joined
[2026-03-11 10:47:31] 2026-03-11 09:47:21,149 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 10:47:31] 2026-03-11 09:47:21,285 | INFO     | [job] retrieve thread has finished
[2026-03-11 10:47:31] 2026-03-11 09:47:21,285 | INFO     | [job] job monitor thread has finished
[2026-03-11 10:47:31] 2026-03-11 09:47:21,285 | INFO     | [job] queue monitor thread has finished
[2026-03-11 10:47:31] 2026-03-11 09:47:21,496 | INFO     | [payload] control thread has finished
[2026-03-11 10:47:31] 2026-03-11 09:47:21,646 | INFO     | [job] control thread has finished
[2026-03-11 10:47:31] 2026-03-11 09:47:21,697 | INFO     | [payload] validate_post thread has finished
[2026-03-11 10:47:31] 2026-03-11 09:47:21,724 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 10:47:31] 2026-03-11 09:47:22,061 | INFO     | [data] control thread has finished
[2026-03-11 10:47:31] 2026-03-11 09:47:22,495 | INFO     | [data] copytool_in thread has finished
[2026-03-11 10:47:31] 2026-03-11 09:47:22,569 | INFO     | [job] validate thread has finished
[2026-03-11 10:47:31] 2026-03-11 09:47:22,595 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 10:47:31] 2026-03-11 09:47:22,666 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 10:47:31] 2026-03-11 09:47:22,695 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 10:47:31] 2026-03-11 09:47:22,757 | INFO     | [payload] failed_post thread has finished
[2026-03-11 10:47:31] 2026-03-11 09:47:23,155 | INFO     | [data] copytool_out thread has finished
[2026-03-11 10:47:31] 2026-03-11 09:47:24,168 | INFO     | [monitor] cgroup control has ended
[2026-03-11 10:47:31] 2026-03-11 09:47:24,286 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 10:47:31] 2026-03-11 09:47:26,218 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140687763887936)>', '<ExcThread(monitor, started 140686821160704)>']
[2026-03-11 10:47:31] 2026-03-11 09:47:26,312 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 10:47:31] 2026-03-11 09:47:26,312 | INFO     | [monitor] control thread has ended
[2026-03-11 10:47:31] 2026-03-11 09:47:31,245 | INFO     | all workflow threads have been joined
[2026-03-11 10:47:31] 2026-03-11 09:47:31,245 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 10:47:31] 2026-03-11 09:47:31,246 | INFO     | traces error code: 0
[2026-03-11 10:47:31] 2026-03-11 09:47:31,246 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 10:47:31] 2026-03-11 09:47:31,288 [wrapper] ==== pilot stdout END ====
[2026-03-11 10:47:31] 2026-03-11 09:47:31,291 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 10:47:31] 2026-03-11 09:47:31,294 [wrapper] pilotpid: 1909510
[2026-03-11 10:47:31] 2026-03-11 09:47:31,296 [wrapper] Pilot exit status: 0
[2026-03-11 10:47:31] 2026-03-11 09:47:31,303 [wrapper] pandaids: 7036047870
[2026-03-11 10:47:31] 2026-03-11 09:47:31,315 [wrapper] cleanup supervisor_pilot 1919370 1909511
[2026-03-11 10:47:31] 2026-03-11 09:47:31,318 [wrapper] Test setup, not cleaning
[2026-03-11 10:47:31] 2026-03-11 09:47:31,320 [wrapper] apfmon messages muted
[2026-03-11 10:47:31] 2026-03-11 09:47:31,322 [wrapper] ==== wrapper stdout END ====
[2026-03-11 10:47:31] 2026-03-11 09:47:31,324 [wrapper] ==== wrapper stderr END ====
[2026-03-11 10:47:31]  *** Error codes and diagnostics ***
[2026-03-11 10:47:31]     "exeErrorCode": 0,
[2026-03-11 10:47:31]     "exeErrorDiag": "",
[2026-03-11 10:47:31]     "pilotErrorCode": 0,
[2026-03-11 10:47:31]     "pilotErrorDiag": "",
[2026-03-11 10:47:31]  *** Listing of results directory ***
[2026-03-11 10:47:31] total 468576
[2026-03-11 10:47:31] -rw-r--r-- 1 boinc boinc    584627 Mar  2 18:50 pilot3.tar.gz
[2026-03-11 10:47:31] -rwx------ 1 boinc boinc     36322 Mar  2 18:51 runpilot2-wrapper.sh
[2026-03-11 10:47:31] -rw-r--r-- 1 boinc boinc      5111 Mar  2 18:51 queuedata.json
[2026-03-11 10:47:31] -rw-r--r-- 1 boinc boinc       100 Mar 11 07:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 10:47:31] -rwxr-xr-x 1 boinc boinc      7986 Mar 11 07:46 run_atlas
[2026-03-11 10:47:31] -rw-r--r-- 1 boinc boinc       105 Mar 11 07:46 job.xml
[2026-03-11 10:47:31] -rw-r--r-- 2 boinc boinc 256352571 Mar 11 07:46 EVNT.48458487._000003.pool.root.1
[2026-03-11 10:47:31] -rw-r--r-- 2 boinc boinc    597965 Mar 11 07:46 input.tar.gz
[2026-03-11 10:47:31] -rw-r--r-- 2 boinc boinc     15845 Mar 11 07:46 start_atlas.sh
[2026-03-11 10:47:31] drwxrwx--x 2 boinc boinc      4096 Mar 11 07:46 shared
[2026-03-11 10:47:31] -rw-r--r-- 1 boinc boinc         0 Mar 11 07:46 boinc_setup_complete
[2026-03-11 10:47:31] -rw-r--r-- 1 boinc boinc      6208 Mar 11 07:46 init_data.xml
[2026-03-11 10:47:31] -rw-r--r-- 1 boinc boinc         0 Mar 11 07:46 boinc_lockfile
[2026-03-11 10:47:31] -rw-r--r-- 1 boinc boinc      2609 Mar 11 07:46 pandaJob.out
[2026-03-11 10:47:31] -rw------- 1 boinc boinc   1006644 Mar 11 07:47 agis_schedconf.cvmfs.json
[2026-03-11 10:47:31] -rw------- 1 boinc boinc       423 Mar 11 07:47 workernode_map.json
[2026-03-11 10:47:31] drwx------ 5 boinc boinc      4096 Mar 11 07:47 pilot3
[2026-03-11 10:47:31] -rw------- 1 boinc boinc        95 Mar 11 10:46 pilot_heartbeat.json
[2026-03-11 10:47:31] -rw------- 1 boinc boinc 215842457 Mar 11 10:46 HITS.48850226._000059.pool.root.1
[2026-03-11 10:47:31] -rw-r--r-- 1 boinc boinc       531 Mar 11 10:47 boinc_task_state.xml
[2026-03-11 10:47:31] -rw-r--r-- 1 boinc boinc      8192 Mar 11 10:47 boinc_mmap_file
[2026-03-11 10:47:31] -rw-r--r-- 1 boinc boinc        28 Mar 11 10:47 wrapper_checkpoint.txt
[2026-03-11 10:47:31] -rw------- 1 boinc boinc      1017 Mar 11 10:47 memory_monitor_summary.json
[2026-03-11 10:47:31] -rw------- 1 boinc boinc   1511578 Mar 11 10:47 agis_ddmendpoints.agis.ALL.json
[2026-03-11 10:47:31] -rw------- 1 boinc boinc    316173 Mar 11 10:47 log.48850226._000059.job.log.tgz.1
[2026-03-11 10:47:31] -rw------- 1 boinc boinc      6300 Mar 11 10:47 heartbeat.json
[2026-03-11 10:47:31] -rw------- 1 boinc boinc      4552 Mar 11 10:47 pilotlog.txt
[2026-03-11 10:47:31] -rw------- 1 boinc boinc   1535572 Mar 11 10:47 log.48850226._000059.job.log.1
[2026-03-11 10:47:31] -rw------- 1 boinc boinc       357 Mar 11 10:47 output.list
[2026-03-11 10:47:31] -rw-r--r-- 1 boinc boinc       620 Mar 11 10:47 runtime_log
[2026-03-11 10:47:31] -rw------- 1 boinc boinc   1873920 Mar 11 10:47 result.tar.gz
[2026-03-11 10:47:31] -rw------- 1 boinc boinc       664 Mar 11 10:47 vs8MDmobMH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm0AELDmimYlfm.diag
[2026-03-11 10:47:31] -rw-r--r-- 1 boinc boinc      8917 Mar 11 10:47 runtime_log.err
[2026-03-11 10:47:31] -rw-r--r-- 1 boinc boinc      6369 Mar 11 10:47 stderr.txt
[2026-03-11 10:47:31] HITS file was successfully produced:
[2026-03-11 10:47:31] -rw------- 1 boinc boinc 215842457 Mar 11 10:46 shared/HITS.pool.root.1
[2026-03-11 10:47:31]  *** Contents of shared directory: ***
[2026-03-11 10:47:31] total 463568
[2026-03-11 10:47:31] -rw-r--r-- 2 boinc boinc 256352571 Mar 11 07:46 ATLAS.root_0
[2026-03-11 10:47:31] -rw-r--r-- 2 boinc boinc    597965 Mar 11 07:46 input.tar.gz
[2026-03-11 10:47:31] -rw-r--r-- 2 boinc boinc     15845 Mar 11 07:46 start_atlas.sh
[2026-03-11 10:47:31] -rw------- 1 boinc boinc 215842457 Mar 11 10:46 HITS.pool.root.1
[2026-03-11 10:47:31] -rw------- 1 boinc boinc   1873920 Mar 11 10:47 result.tar.gz
10:47:33 (1905483): run_atlas exited; CPU time 21126.649969
10:47:33 (1905483): called boinc_finish(0)

</stderr_txt>
]]>

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