Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
04:09:44 (1055209): wrapper (7.7.26015): starting
04:09:44 (1055209): wrapper: running run_atlas (--nthreads 12)
[2026-03-11 04:09:44] Arguments: --nthreads 12
[2026-03-11 04:09:44] Threads: 12
[2026-03-11 04:09:44] Checking for CVMFS
[2026-03-11 04:09:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 04:09:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 04:09:44] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 04:09:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 04:09:44] 2.13.3.0 1041899 1 41444 157140 2 186 2990890 4096000 600 130560 0 33111 99.997 1336 1684 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-11 04:09:44] CVMFS is ok
[2026-03-11 04:09:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 04:09:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-11 04:09:44] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-11 04:09:44] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-11 04:09:44] Further information can be found at the LHC@home message board.
[2026-03-11 04:09:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 04:09:44] Checking for apptainer binary...
[2026-03-11 04:09:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 04:09:44] Running /usr/bin/apptainer --version
[2026-03-11 04:09:44] apptainer version 1.4.5
[2026-03-11 04:09:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 04:09:44] test-run
[2026-03-11 04:09:44] apptainer works
[2026-03-11 04:09:44] Set ATHENA_PROC_NUMBER=12
[2026-03-11 04:09:44] Set ATHENA_CORE_NUMBER=12
[2026-03-11 04:09:44] Starting ATLAS job with PandaID=7039905838
[2026-03-11 04:09:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 04:38:57]  *** The last 200 lines of the pilot log: ***
[2026-03-11 04:38:57]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-11 04:38:57]  is_altstaged=None
[2026-03-11 04:38:57]  is_tar=False
[2026-03-11 04:38:57]  lfn=log.48955006._026483.job.log.tgz.1
[2026-03-11 04:38:57]  mtime=0
[2026-03-11 04:38:57]  protocol_id=None
[2026-03-11 04:38:57]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-11 04:38:57]  replicas=None
[2026-03-11 04:38:57]  scope=mc23_13p6TeV
[2026-03-11 04:38:57]  status=None
[2026-03-11 04:38:57]  status_code=0
[2026-03-11 04:38:57]  storage_token=
[2026-03-11 04:38:57]  surl=/var/lib/boinc-client/slots/18/PanDA_Pilot-7039905838/log.48955006._026483.job.log.tgz.1
[2026-03-11 04:38:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1c/ae/log.48955006._026483.job.log.tgz.1
[2026-03-11 04:38:57]  workdir=None
[2026-03-11 04:38:57] ]
[2026-03-11 04:38:57] 2026-03-11 04:38:23,195 | INFO     | transferring file log.48955006._026483.job.log.tgz.1 from /var/lib/boinc-client/slots/18/PanDA_Pilot-7039905838/log.48955006._026483.job.log.tgz.1 to /var/lib/boin
[2026-03-11 04:38:57] 2026-03-11 04:38:23,195 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/18/PanDA_Pilot-7039905838/log.48955006._026483.job.log.tgz.1 /var/lib/boinc-client/slots/18/log.4895
[2026-03-11 04:38:57] 2026-03-11 04:38:23,205 | INFO     | adding to output.list: log.48955006._026483.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1c/ae/log.48955006._026483.job.log.tg
[2026-03-11 04:38:57] 2026-03-11 04:38:23,205 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-11 04:38:57] 2026-03-11 04:38:23,205 | INFO     | summary of transferred files:
[2026-03-11 04:38:57] 2026-03-11 04:38:23,205 | INFO     |  -- lfn=log.48955006._026483.job.log.tgz.1, status_code=0, status=transferred
[2026-03-11 04:38:57] 2026-03-11 04:38:23,205 | INFO     | stage-out finished correctly
[2026-03-11 04:38:57] 2026-03-11 04:38:23,453 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-11 04:38:57] 2026-03-11 04:38:23,492 | INFO     | job 7039905838 has state=finished
[2026-03-11 04:38:57] 2026-03-11 04:38:23,492 | INFO     | preparing for final server update for job 7039905838 in state='finished'
[2026-03-11 04:38:57] 2026-03-11 04:38:23,492 | INFO     | reading metadata from: /var/lib/boinc-client/slots/18/PanDA_Pilot-7039905838/jobReport.json
[2026-03-11 04:38:57] 2026-03-11 04:38:23,493 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/18/workernode_map.json
[2026-03-11 04:38:57] 2026-03-11 04:38:23,493 | INFO     | this job has now completed (state=finished)
[2026-03-11 04:38:57] 2026-03-11 04:38:23,493 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-11 04:38:57] 2026-03-11 04:38:23,494 | INFO     | log transfer has been attempted: DONE
[2026-03-11 04:38:57] 2026-03-11 04:38:23,494 | INFO     | job 7039905838 has finished - writing final server update
[2026-03-11 04:38:57] 2026-03-11 04:38:23,494 | INFO     | total number of processed events: 400 (read)
[2026-03-11 04:38:57] 2026-03-11 04:38:23,495 | INFO     | using path: /var/lib/boinc-client/slots/18/PanDA_Pilot-7039905838/memory_monitor_summary.json (trf name=prmon)
[2026-03-11 04:38:57] 2026-03-11 04:38:23,496 | INFO     | extracted standard info from prmon json
[2026-03-11 04:38:57] 2026-03-11 04:38:23,496 | INFO     | extracted standard memory fields from prmon json
[2026-03-11 04:38:57] 2026-03-11 04:38:23,496 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-11 04:38:57] 2026-03-11 04:38:23,496 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-11 04:38:57] 2026-03-11 04:38:23,496 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-11 04:38:57] 2026-03-11 04:38:23,496 | INFO     | fitting pss+swap vs Time
[2026-03-11 04:38:57] 2026-03-11 04:38:23,496 | INFO     | sum of square deviations: 2865170.0
[2026-03-11 04:38:57] 2026-03-11 04:38:23,496 | INFO     | sum of deviations: 1200704907.0
[2026-03-11 04:38:57] 2026-03-11 04:38:23,496 | INFO     | mean x: 1773203119.0
[2026-03-11 04:38:57] 2026-03-11 04:38:23,496 | INFO     | mean y: 2603384.380952381
[2026-03-11 04:38:57] 2026-03-11 04:38:23,497 | INFO     | intersect: -743092461163.6232
[2026-03-11 04:38:57] 2026-03-11 04:38:23,497 | INFO     | chi2: 0.2846335211413094
[2026-03-11 04:38:57] 2026-03-11 04:38:23,497 | INFO     | current memory leak: 419.07 B/s (using 21 data points, chi2=0.28)
[2026-03-11 04:38:57] 2026-03-11 04:38:23,497 | INFO     | could have reported an average CPU frequency of 4291 MHz (4 samples)
[2026-03-11 04:38:57] 2026-03-11 04:38:23,497 | INFO     | ..............................
[2026-03-11 04:38:57] 2026-03-11 04:38:23,497 | INFO     | . Timing measurements:
[2026-03-11 04:38:57] 2026-03-11 04:38:23,497 | INFO     | . get job = 0 s
[2026-03-11 04:38:57] 2026-03-11 04:38:23,497 | INFO     | . initial setup = 3 s
[2026-03-11 04:38:57] 2026-03-11 04:38:23,497 | INFO     | . payload setup = 1 s
[2026-03-11 04:38:57] 2026-03-11 04:38:23,497 | INFO     | . stage-in = 0 s
[2026-03-11 04:38:57] 2026-03-11 04:38:23,497 | INFO     | . payload execution = 1697 s
[2026-03-11 04:38:57] 2026-03-11 04:38:23,497 | INFO     | . stage-out = 0 s
[2026-03-11 04:38:57] 2026-03-11 04:38:23,497 | INFO     | . log creation = 0 s
[2026-03-11 04:38:57] 2026-03-11 04:38:23,497 | INFO     | ..............................
[2026-03-11 04:38:57] 2026-03-11 04:38:23,532 | INFO     | 
[2026-03-11 04:38:57] 2026-03-11 04:38:23,532 | INFO     | job summary report
[2026-03-11 04:38:57] 2026-03-11 04:38:23,532 | INFO     | --------------------------------------------------
[2026-03-11 04:38:57] 2026-03-11 04:38:23,532 | INFO     | PanDA job id: 7039905838
[2026-03-11 04:38:57] 2026-03-11 04:38:23,532 | INFO     | task id: 48955006
[2026-03-11 04:38:57] 2026-03-11 04:38:23,532 | INFO     | errors: (none)
[2026-03-11 04:38:57] 2026-03-11 04:38:23,532 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-11 04:38:57] 2026-03-11 04:38:23,532 | INFO     | pilot state: finished 
[2026-03-11 04:38:57] 2026-03-11 04:38:23,532 | INFO     | transexitcode: 0
[2026-03-11 04:38:57] 2026-03-11 04:38:23,532 | INFO     | exeerrorcode: 0
[2026-03-11 04:38:57] 2026-03-11 04:38:23,532 | INFO     | exeerrordiag: 
[2026-03-11 04:38:57] 2026-03-11 04:38:23,532 | INFO     | exitcode: 0
[2026-03-11 04:38:57] 2026-03-11 04:38:23,532 | INFO     | exitmsg: OK
[2026-03-11 04:38:57] 2026-03-11 04:38:23,532 | INFO     | cpuconsumptiontime: 15473 s
[2026-03-11 04:38:57] 2026-03-11 04:38:23,532 | INFO     | nevents: 400
[2026-03-11 04:38:57] 2026-03-11 04:38:23,532 | INFO     | neventsw: 0
[2026-03-11 04:38:57] 2026-03-11 04:38:23,532 | INFO     | pid: 1063665
[2026-03-11 04:38:57] 2026-03-11 04:38:23,532 | INFO     | pgrp: 1063665
[2026-03-11 04:38:57] 2026-03-11 04:38:23,532 | INFO     | corecount: 12
[2026-03-11 04:38:57] 2026-03-11 04:38:23,532 | INFO     | event service: False
[2026-03-11 04:38:57] 2026-03-11 04:38:23,532 | INFO     | sizes: {0: 2280238, 10: 2280238, 1702: 2305111, 1703: 2314319}
[2026-03-11 04:38:57] 2026-03-11 04:38:23,532 | INFO     | --------------------------------------------------
[2026-03-11 04:38:57] 2026-03-11 04:38:23,532 | INFO     | 
[2026-03-11 04:38:57] 2026-03-11 04:38:23,532 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/18
[2026-03-11 04:38:57] 2026-03-11 04:38:23,541 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-11 04:38:57] 2026-03-11 04:38:23,541 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-11 04:38:57] 2026-03-11 04:38:23,541 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-11 04:38:57] 2026-03-11 04:38:23,541 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-11 04:38:57] 2026-03-11 04:38:23,541 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-11 04:38:57] 2026-03-11 04:38:23,541 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-11 04:38:57] 2026-03-11 04:38:23,541 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-11 04:38:57] 2026-03-11 04:38:23,542 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-11 04:38:57] 2026-03-11 04:38:23,542 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-11 04:38:57] 2026-03-11 04:38:23,542 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-11 04:38:57] 2026-03-11 04:38:23,542 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-11 04:38:57] 2026-03-11 04:38:23,542 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-11 04:38:57] 2026-03-11 04:38:23,542 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-11 04:38:57] 2026-03-11 04:38:23,542 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-11 04:38:57] 2026-03-11 04:38:23,542 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-11 04:38:57] 2026-03-11 04:38:23,542 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-11 04:38:57] 2026-03-11 04:38:23,542 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-11 04:38:57] 2026-03-11 04:38:23,542 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-11 04:38:57] 2026-03-11 04:38:23,542 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-11 04:38:57] 2026-03-11 04:38:23,542 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-11 04:38:57] 2026-03-11 04:38:23,542 | INFO     | job 7039905838 has completed (purged errors)
[2026-03-11 04:38:57] 2026-03-11 04:38:23,542 | INFO     | overall cleanup function is called
[2026-03-11 04:38:57] 2026-03-11 04:38:24,548 | INFO     | --- collectZombieJob: --- 10, [1063665]
[2026-03-11 04:38:57] 2026-03-11 04:38:24,548 | INFO     | zombie collector waiting for pid 1063665
[2026-03-11 04:38:57] 2026-03-11 04:38:24,548 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-11 04:38:57] 2026-03-11 04:38:24,548 | INFO     | collected zombie processes
[2026-03-11 04:38:57] 2026-03-11 04:38:24,548 | INFO     | will attempt to kill all subprocesses of pid=1063665
[2026-03-11 04:38:57] 2026-03-11 04:38:24,578 | INFO     | process IDs to be killed: [1063665] (in reverse order)
[2026-03-11 04:38:57] 2026-03-11 04:38:24,598 | WARNING  | found no corresponding commands to process id(s)
[2026-03-11 04:38:57] 2026-03-11 04:38:24,598 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-11 04:38:57] 2026-03-11 04:38:24,599 | INFO     | did not find any defunct processes belonging to 1063665
[2026-03-11 04:38:57] 2026-03-11 04:38:24,600 | INFO     | did not find any defunct processes belonging to 1063665
[2026-03-11 04:38:57] 2026-03-11 04:38:24,600 | INFO     | ready for new job
[2026-03-11 04:38:57] 2026-03-11 04:38:24,600 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-11 04:38:57] 2026-03-11 04:38:24,601 | INFO     | **************************************
[2026-03-11 04:38:57] 2026-03-11 04:38:24,601 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-11 04:38:57] 2026-03-11 04:38:24,601 | INFO     | **************************************
[2026-03-11 04:38:57] 2026-03-11 04:38:24,601 | INFO     | 
[2026-03-11 04:38:57] 2026-03-11 04:38:24,602 | INFO     | pilot is running in a VM
[2026-03-11 04:38:57] 2026-03-11 04:38:24,602 | INFO     | architecture information:
[2026-03-11 04:38:57] 2026-03-11 04:38:24,602 | INFO     | executing command: cat /etc/os-release
[2026-03-11 04:38:57] 2026-03-11 04:38:24,608 | INFO     | cat /etc/os-release:
[2026-03-11 04:38:57] NAME="CentOS Linux"
[2026-03-11 04:38:57] VERSION="7 (Core)"
[2026-03-11 04:38:57] ID="centos"
[2026-03-11 04:38:57] ID_LIKE="rhel fedora"
[2026-03-11 04:38:57] VERSION_ID="7"
[2026-03-11 04:38:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-11 04:38:57] ANSI_COLOR="0;31"
[2026-03-11 04:38:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-11 04:38:57] HOME_URL="https://www.centos.org/"
[2026-03-11 04:38:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-11 04:38:57] 
[2026-03-11 04:38:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-11 04:38:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-11 04:38:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-11 04:38:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-11 04:38:57] 
[2026-03-11 04:38:57] 2026-03-11 04:38:24,608 | INFO     | **************************************
[2026-03-11 04:38:57] 2026-03-11 04:38:25,111 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/18
[2026-03-11 04:38:57] 2026-03-11 04:38:25,120 | INFO     | sufficient remaining disk space (65780318208 B)
[2026-03-11 04:38:57] 2026-03-11 04:38:25,120 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-11 04:38:57] 2026-03-11 04:38:25,120 | INFO     | current server update state: UPDATING_FINAL
[2026-03-11 04:38:57] 2026-03-11 04:38:25,120 | INFO     | update_server=False
[2026-03-11 04:38:57] 2026-03-11 04:38:25,120 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-11 04:38:57] 2026-03-11 04:38:25,120 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 04:38:57] 2026-03-11 04:38:25,120 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 04:38:57] 2026-03-11 04:38:26,125 | INFO     | [job] retrieve thread has finished
[2026-03-11 04:38:57] 2026-03-11 04:38:26,125 | INFO     | [job] queue monitor thread has finished
[2026-03-11 04:38:57] 2026-03-11 04:38:26,205 | INFO     | all data control threads have been joined
[2026-03-11 04:38:57] 2026-03-11 04:38:26,247 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 04:38:57] 2026-03-11 04:38:26,352 | INFO     | all payload control threads have been joined
[2026-03-11 04:38:57] 2026-03-11 04:38:26,742 | INFO     | all job control threads have been joined
[2026-03-11 04:38:57] 2026-03-11 04:38:26,750 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 04:38:57] 2026-03-11 04:38:26,925 | INFO     | [job] validate thread has finished
[2026-03-11 04:38:57] 2026-03-11 04:38:26,986 | INFO     | [payload] validate_post thread has finished
[2026-03-11 04:38:57] 2026-03-11 04:38:27,042 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 04:38:57] 2026-03-11 04:38:27,049 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 04:38:57] 2026-03-11 04:38:27,088 | INFO     | [data] copytool_in thread has finished
[2026-03-11 04:38:57] 2026-03-11 04:38:27,210 | INFO     | [data] control thread has finished
[2026-03-11 04:38:57] 2026-03-11 04:38:27,357 | INFO     | [payload] control thread has finished
[2026-03-11 04:38:57] 2026-03-11 04:38:27,508 | WARNING  | process 1063665 can no longer be monitored (due to stat problems) - aborting
[2026-03-11 04:38:57] 2026-03-11 04:38:27,529 | INFO     | using path: /var/lib/boinc-client/slots/18/memory_monitor_summary.json (trf name=prmon)
[2026-03-11 04:38:57] 2026-03-11 04:38:27,556 | INFO     | number of running child processes to parent process 1063665: 1
[2026-03-11 04:38:57] 2026-03-11 04:38:27,556 | INFO     | maximum number of monitored processes: 6
[2026-03-11 04:38:57] 2026-03-11 04:38:27,556 | INFO     | aborting job monitoring since job object (job id=7039905838) has expired
[2026-03-11 04:38:57] 2026-03-11 04:38:27,556 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-11 04:38:57] 2026-03-11 04:38:27,556 | INFO     | will abort loop
[2026-03-11 04:38:57] 2026-03-11 04:38:27,727 | INFO     | [payload] failed_post thread has finished
[2026-03-11 04:38:57] 2026-03-11 04:38:27,747 | INFO     | [job] control thread has finished
[2026-03-11 04:38:57] 2026-03-11 04:38:28,252 | INFO     | [data] copytool_out thread has finished
[2026-03-11 04:38:57] 2026-03-11 04:38:28,561 | INFO     | [job] job monitor thread has finished
[2026-03-11 04:38:57] 2026-03-11 04:38:29,126 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 04:38:57] 2026-03-11 04:38:35,793 | INFO     | job.realtimelogging is not enabled
[2026-03-11 04:38:57] 2026-03-11 04:38:36,798 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 04:38:57] 2026-03-11 04:38:52,555 | INFO     | [monitor] cgroup control has ended
[2026-03-11 04:38:57] 2026-03-11 04:38:52,664 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135481685747520)>', '<ExcThread(monitor, started 135480901359360)>']
[2026-03-11 04:38:57] 2026-03-11 04:38:56,098 | INFO     | PID=1059068 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-11 04:38:57] 2026-03-11 04:38:56,098 | INFO     | .. there are 2 such processes running
[2026-03-11 04:38:57] 2026-03-11 04:38:56,099 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 04:38:57] 2026-03-11 04:38:56,099 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 04:38:57] 2026-03-11 04:38:56,099 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 04:38:57] 2026-03-11 04:38:56,099 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 04:38:57] 2026-03-11 04:38:56,099 | INFO     | [monitor] control thread has ended
[2026-03-11 04:38:57] 2026-03-11 04:38:57,689 | INFO     | all workflow threads have been joined
[2026-03-11 04:38:57] 2026-03-11 04:38:57,689 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 04:38:57] 2026-03-11 04:38:57,689 | INFO     | traces error code: 0
[2026-03-11 04:38:57] 2026-03-11 04:38:57,689 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 04:38:57] 2026-03-11 04:38:57,753 [wrapper] ==== pilot stdout END ====
[2026-03-11 04:38:57] 2026-03-11 04:38:57,754 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 04:38:57] 2026-03-11 04:38:57,755 [wrapper] pilotpid: 1059068
[2026-03-11 04:38:57] 2026-03-11 04:38:57,757 [wrapper] Pilot exit status: 0
[2026-03-11 04:38:57] 2026-03-11 04:38:57,761 [wrapper] pandaids: 7039905838
[2026-03-11 04:38:57] 2026-03-11 04:38:57,773 [wrapper] cleanup supervisor_pilot 1068354 1059069
[2026-03-11 04:38:57] 2026-03-11 04:38:57,775 [wrapper] Test setup, not cleaning
[2026-03-11 04:38:57] 2026-03-11 04:38:57,776 [wrapper] apfmon messages muted
[2026-03-11 04:38:57] 2026-03-11 04:38:57,777 [wrapper] ==== wrapper stdout END ====
[2026-03-11 04:38:57] 2026-03-11 04:38:57,778 [wrapper] ==== wrapper stderr END ====
[2026-03-11 04:38:57]  *** Error codes and diagnostics ***
[2026-03-11 04:38:57]     "exeErrorCode": 0,
[2026-03-11 04:38:57]     "exeErrorDiag": "",
[2026-03-11 04:38:57]     "pilotErrorCode": 0,
[2026-03-11 04:38:57]     "pilotErrorDiag": "",
[2026-03-11 04:38:57]  *** Listing of results directory ***
[2026-03-11 04:38:57] total 615104
[2026-03-11 04:38:57] -rw-r--r-- 1 boinc boinc    584627 Mar  8 13:48 pilot3.tar.gz
[2026-03-11 04:38:57] -rw-r--r-- 1 boinc boinc      5111 Mar  8 13:49 queuedata.json
[2026-03-11 04:38:57] -rwx------ 1 boinc boinc     36322 Mar  8 13:49 runpilot2-wrapper.sh
[2026-03-11 04:38:57] -rw-r--r-- 1 boinc boinc       100 Mar 11 04:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 04:38:57] -rwxr-xr-x 1 boinc boinc      7986 Mar 11 04:09 run_atlas
[2026-03-11 04:38:57] -rw-r--r-- 1 boinc boinc       105 Mar 11 04:09 job.xml
[2026-03-11 04:38:57] -rw-r--r-- 2 boinc boinc 438865770 Mar 11 04:09 EVNT.46701403._000530.pool.root.1
[2026-03-11 04:38:57] -rw-r--r-- 2 boinc boinc     15845 Mar 11 04:09 start_atlas.sh
[2026-03-11 04:38:57] drwxrwx--x 2 boinc boinc      4096 Mar 11 04:09 shared
[2026-03-11 04:38:57] -rw-r--r-- 2 boinc boinc    597949 Mar 11 04:09 input.tar.gz
[2026-03-11 04:38:57] -rw-r--r-- 1 boinc boinc      7994 Mar 11 04:09 init_data.xml
[2026-03-11 04:38:57] -rw-r--r-- 1 boinc boinc         0 Mar 11 04:09 boinc_lockfile
[2026-03-11 04:38:57] -rw-r--r-- 1 boinc boinc      2564 Mar 11 04:09 pandaJob.out
[2026-03-11 04:38:57] -rw------- 1 boinc boinc   1006644 Mar 11 04:09 agis_schedconf.cvmfs.json
[2026-03-11 04:38:57] -rw------- 1 boinc boinc   1511578 Mar 11 04:09 agis_ddmendpoints.agis.ALL.json
[2026-03-11 04:38:57] -rw------- 1 boinc boinc       420 Mar 11 04:09 workernode_map.json
[2026-03-11 04:38:57] drwx------ 5 boinc boinc      4096 Mar 11 04:09 pilot3
[2026-03-11 04:38:57] -rw-r--r-- 1 boinc boinc       530 Mar 11 04:38 boinc_task_state.xml
[2026-03-11 04:38:57] -rw------- 1 boinc boinc 185789064 Mar 11 04:38 HITS.48955006._026483.pool.root.1
[2026-03-11 04:38:57] -rw------- 1 boinc boinc      1021 Mar 11 04:38 memory_monitor_summary.json
[2026-03-11 04:38:57] -rw------- 1 boinc boinc    345744 Mar 11 04:38 log.48955006._026483.job.log.tgz.1
[2026-03-11 04:38:57] -rw------- 1 boinc boinc      6288 Mar 11 04:38 heartbeat.json
[2026-03-11 04:38:57] -rw------- 1 boinc boinc        95 Mar 11 04:38 pilot_heartbeat.json
[2026-03-11 04:38:57] -rw-r--r-- 1 boinc boinc      8192 Mar 11 04:38 boinc_mmap_file
[2026-03-11 04:38:57] -rw-r--r-- 1 boinc boinc        27 Mar 11 04:38 wrapper_checkpoint.txt
[2026-03-11 04:38:57] -rw------- 1 boinc boinc      5490 Mar 11 04:38 pilotlog.txt
[2026-03-11 04:38:57] -rw------- 1 boinc boinc    292655 Mar 11 04:38 log.48955006._026483.job.log.1
[2026-03-11 04:38:57] -rw------- 1 boinc boinc       357 Mar 11 04:38 output.list
[2026-03-11 04:38:57] -rw-r--r-- 1 boinc boinc       620 Mar 11 04:38 runtime_log
[2026-03-11 04:38:57] -rw------- 1 boinc boinc    655360 Mar 11 04:38 result.tar.gz
[2026-03-11 04:38:57] -rw-r--r-- 1 boinc boinc      8905 Mar 11 04:38 runtime_log.err
[2026-03-11 04:38:57] -rw------- 1 boinc boinc       642 Mar 11 04:38 PvxKDmTgTJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmRKZLDmcMoQZm.diag
[2026-03-11 04:38:57] -rw-r--r-- 1 boinc boinc     21579 Mar 11 04:38 stderr.txt
[2026-03-11 04:38:57] HITS file was successfully produced:
[2026-03-11 04:38:57] -rw------- 1 boinc boinc 185789064 Mar 11 04:38 shared/HITS.pool.root.1
[2026-03-11 04:38:57]  *** Contents of shared directory: ***
[2026-03-11 04:38:57] total 611264
[2026-03-11 04:38:57] -rw-r--r-- 2 boinc boinc 438865770 Mar 11 04:09 ATLAS.root_0
[2026-03-11 04:38:57] -rw-r--r-- 2 boinc boinc     15845 Mar 11 04:09 start_atlas.sh
[2026-03-11 04:38:57] -rw-r--r-- 2 boinc boinc    597949 Mar 11 04:09 input.tar.gz
[2026-03-11 04:38:57] -rw------- 1 boinc boinc 185789064 Mar 11 04:38 HITS.pool.root.1
[2026-03-11 04:38:57] -rw------- 1 boinc boinc    655360 Mar 11 04:38 result.tar.gz
04:38:59 (1055209): run_atlas exited; CPU time 15479.684126
04:38:59 (1055209): called boinc_finish(0)

</stderr_txt>
]]>

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