Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:02:24 (4131829): wrapper (7.7.26015): starting
04:02:24 (4131829): wrapper: running run_atlas (--nthreads 4)
[2026-03-11 04:02:24] Arguments: --nthreads 4
[2026-03-11 04:02:24] Threads: 4
[2026-03-11 04:02:24] Checking for CVMFS
[2026-03-11 04:02:24] No cvmfs_config command found, will try listing directly
[2026-03-11 04:02:24] CVMFS is ok
[2026-03-11 04:02:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 04:02:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-11 04:02:24] Further information can be found at the LHC@home message board.
[2026-03-11 04:02:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 04:02:24] Checking for apptainer binary...
[2026-03-11 04:02:24] which: no apptainer in ((null))
[2026-03-11 04:02:24] apptainer is not installed, using version from CVMFS
[2026-03-11 04:02:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 04:02:24] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot156/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-03-11 04:02:24] apptainer works
[2026-03-11 04:02:24] Set ATHENA_PROC_NUMBER=4
[2026-03-11 04:02:24] Set ATHENA_CORE_NUMBER=4
[2026-03-11 04:02:24] Starting ATLAS job with PandaID=7041481690
[2026-03-11 04:02:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot156/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 05:24:24]  *** The last 200 lines of the pilot log: ***
[2026-03-11 05:24:24]  mtime=0
[2026-03-11 05:24:24]  protocol_id=None
[2026-03-11 05:24:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-11 05:24:24]  replicas=None
[2026-03-11 05:24:24]  scope=mc23_13p6TeV
[2026-03-11 05:24:24]  status=None
[2026-03-11 05:24:24]  status_code=0
[2026-03-11 05:24:24]  storage_token=
[2026-03-11 05:24:24]  surl=/var/lib/boinc/var/slot156/slots/0/PanDA_Pilot-7041481690/log.48955006._036878.job.log.tgz.1
[2026-03-11 05:24:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f1/6c/log.48955006._036878.job.log.tgz.1
[2026-03-11 05:24:24]  workdir=None
[2026-03-11 05:24:24] ]
[2026-03-11 05:24:24] 2026-03-11 04:23:24,830 | INFO     | transferring file log.48955006._036878.job.log.tgz.1 from /var/lib/boinc/var/slot156/slots/0/PanDA_Pilot-7041481690/log.48955006._036878.job.log.tgz.1 to /var/lib/
[2026-03-11 05:24:24] 2026-03-11 04:23:24,830 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot156/slots/0/PanDA_Pilot-7041481690/log.48955006._036878.job.log.tgz.1 /var/lib/boinc/var/slot156/slots/0/
[2026-03-11 05:24:24] 2026-03-11 04:23:24,848 | INFO     | adding to output.list: log.48955006._036878.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f1/6c/log.48955006._036878.job.log.tg
[2026-03-11 05:24:24] 2026-03-11 04:23:24,848 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-11 05:24:24] 2026-03-11 04:23:24,848 | INFO     | summary of transferred files:
[2026-03-11 05:24:24] 2026-03-11 04:23:24,848 | INFO     |  -- lfn=log.48955006._036878.job.log.tgz.1, status_code=0, status=transferred
[2026-03-11 05:24:24] 2026-03-11 04:23:24,848 | INFO     | stage-out finished correctly
[2026-03-11 05:24:24] 2026-03-11 04:23:24,897 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-11 05:24:24] 2026-03-11 04:23:26,057 | INFO     | job 7041481690 has state=finished
[2026-03-11 05:24:24] 2026-03-11 04:23:26,058 | INFO     | preparing for final server update for job 7041481690 in state='finished'
[2026-03-11 05:24:24] 2026-03-11 04:23:26,058 | INFO     | reading metadata from: /var/lib/boinc/var/slot156/slots/0/PanDA_Pilot-7041481690/jobReport.json
[2026-03-11 05:24:24] 2026-03-11 04:23:26,059 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot156/slots/0/workernode_map.json
[2026-03-11 05:24:24] 2026-03-11 04:23:26,060 | INFO     | this job has now completed (state=finished)
[2026-03-11 05:24:24] 2026-03-11 04:23:26,060 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-11 05:24:24] 2026-03-11 04:23:26,060 | INFO     | log transfer has been attempted: DONE
[2026-03-11 05:24:24] 2026-03-11 04:23:26,060 | INFO     | job 7041481690 has finished - writing final server update
[2026-03-11 05:24:24] 2026-03-11 04:23:26,060 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1893887/.job.ad'
[2026-03-11 05:24:24] 2026-03-11 04:23:26,060 | INFO     | total number of processed events: 400 (read)
[2026-03-11 05:24:24] 2026-03-11 04:23:26,077 | INFO     | using path: /var/lib/boinc/var/slot156/slots/0/PanDA_Pilot-7041481690/memory_monitor_summary.json (trf name=prmon)
[2026-03-11 05:24:24] 2026-03-11 04:23:26,078 | INFO     | extracted standard info from prmon json
[2026-03-11 05:24:24] 2026-03-11 04:23:26,078 | INFO     | extracted standard memory fields from prmon json
[2026-03-11 05:24:24] 2026-03-11 04:23:26,078 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-11 05:24:24] 2026-03-11 04:23:26,078 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-11 05:24:24] 2026-03-11 04:23:26,078 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-11 05:24:24] 2026-03-11 04:23:26,079 | INFO     | fitting pss+swap vs Time
[2026-03-11 05:24:24] 2026-03-11 04:23:26,079 | INFO     | sum of square deviations: 115715658.0
[2026-03-11 05:24:24] 2026-03-11 04:23:26,079 | INFO     | sum of deviations: 315556080.5
[2026-03-11 05:24:24] 2026-03-11 04:23:26,079 | INFO     | mean x: 1773200653.5
[2026-03-11 05:24:24] 2026-03-11 04:23:26,079 | INFO     | mean y: 2327940.097222222
[2026-03-11 05:24:24] 2026-03-11 04:23:26,079 | INFO     | intersect: -4833182291.01168
[2026-03-11 05:24:24] 2026-03-11 04:23:26,080 | INFO     | chi2: 0.00022365631570372597
[2026-03-11 05:24:24] 2026-03-11 04:23:26,080 | INFO     | current memory leak: 2.73 B/s (using 72 data points, chi2=0.00)
[2026-03-11 05:24:24] 2026-03-11 04:23:26,080 | INFO     | could have reported an average CPU frequency of 3573 MHz (6 samples)
[2026-03-11 05:24:24] 2026-03-11 04:23:26,080 | INFO     | ..............................
[2026-03-11 05:24:24] 2026-03-11 04:23:26,080 | INFO     | . Timing measurements:
[2026-03-11 05:24:24] 2026-03-11 04:23:26,080 | INFO     | . get job = 0 s
[2026-03-11 05:24:24] 2026-03-11 04:23:26,080 | INFO     | . initial setup = 6 s
[2026-03-11 05:24:24] 2026-03-11 04:23:26,080 | INFO     | . payload setup = 7 s
[2026-03-11 05:24:24] 2026-03-11 04:23:26,080 | INFO     | . stage-in = 0 s
[2026-03-11 05:24:24] 2026-03-11 04:23:26,080 | INFO     | . payload execution = 4823 s
[2026-03-11 05:24:24] 2026-03-11 04:23:26,080 | INFO     | . stage-out = 0 s
[2026-03-11 05:24:24] 2026-03-11 04:23:26,080 | INFO     | . log creation = 0 s
[2026-03-11 05:24:24] 2026-03-11 04:23:26,080 | INFO     | ..............................
[2026-03-11 05:24:24] 2026-03-11 04:23:26,126 | INFO     | 
[2026-03-11 05:24:24] 2026-03-11 04:23:26,127 | INFO     | job summary report
[2026-03-11 05:24:24] 2026-03-11 04:23:26,127 | INFO     | --------------------------------------------------
[2026-03-11 05:24:24] 2026-03-11 04:23:26,127 | INFO     | PanDA job id: 7041481690
[2026-03-11 05:24:24] 2026-03-11 04:23:26,127 | INFO     | task id: 48955006
[2026-03-11 05:24:24] 2026-03-11 04:23:26,127 | INFO     | errors: (none)
[2026-03-11 05:24:24] 2026-03-11 04:23:26,127 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-11 05:24:24] 2026-03-11 04:23:26,127 | INFO     | pilot state: finished 
[2026-03-11 05:24:24] 2026-03-11 04:23:26,127 | INFO     | transexitcode: 0
[2026-03-11 05:24:24] 2026-03-11 04:23:26,127 | INFO     | exeerrorcode: 0
[2026-03-11 05:24:24] 2026-03-11 04:23:26,127 | INFO     | exeerrordiag: 
[2026-03-11 05:24:24] 2026-03-11 04:23:26,127 | INFO     | exitcode: 0
[2026-03-11 05:24:24] 2026-03-11 04:23:26,127 | INFO     | exitmsg: OK
[2026-03-11 05:24:24] 2026-03-11 04:23:26,127 | INFO     | cpuconsumptiontime: 18353 s
[2026-03-11 05:24:24] 2026-03-11 04:23:26,127 | INFO     | nevents: 400
[2026-03-11 05:24:24] 2026-03-11 04:23:26,127 | INFO     | neventsw: 0
[2026-03-11 05:24:24] 2026-03-11 04:23:26,127 | INFO     | pid: 4142907
[2026-03-11 05:24:24] 2026-03-11 04:23:26,127 | INFO     | pgrp: 4142907
[2026-03-11 05:24:24] 2026-03-11 04:23:26,127 | INFO     | corecount: 4
[2026-03-11 05:24:24] 2026-03-11 04:23:26,127 | INFO     | event service: False
[2026-03-11 05:24:24] 2026-03-11 04:23:26,127 | INFO     | sizes: {0: 2280244, 11: 2280244, 4834: 2306615, 4835: 2315693, 4836: 2315831}
[2026-03-11 05:24:24] 2026-03-11 04:23:26,127 | INFO     | --------------------------------------------------
[2026-03-11 05:24:24] 2026-03-11 04:23:26,127 | INFO     | 
[2026-03-11 05:24:24] 2026-03-11 04:23:26,127 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot156/slots/0
[2026-03-11 05:24:24] 2026-03-11 04:23:26,146 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-11 05:24:24] 2026-03-11 04:23:26,147 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-11 05:24:24] 2026-03-11 04:23:26,147 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-11 05:24:24] 2026-03-11 04:23:26,147 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-11 05:24:24] 2026-03-11 04:23:26,147 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-11 05:24:24] 2026-03-11 04:23:26,147 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-11 05:24:24] 2026-03-11 04:23:26,147 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-11 05:24:24] 2026-03-11 04:23:26,147 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-11 05:24:24] 2026-03-11 04:23:26,147 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-11 05:24:24] 2026-03-11 04:23:26,147 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-11 05:24:24] 2026-03-11 04:23:26,147 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-11 05:24:24] 2026-03-11 04:23:26,147 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-11 05:24:24] 2026-03-11 04:23:26,147 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-11 05:24:24] 2026-03-11 04:23:26,147 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-11 05:24:24] 2026-03-11 04:23:26,147 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-11 05:24:24] 2026-03-11 04:23:26,147 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-11 05:24:24] 2026-03-11 04:23:26,147 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-11 05:24:24] 2026-03-11 04:23:26,147 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-11 05:24:24] 2026-03-11 04:23:26,147 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-11 05:24:24] 2026-03-11 04:23:26,147 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-11 05:24:24] 2026-03-11 04:23:26,147 | INFO     | job 7041481690 has completed (purged errors)
[2026-03-11 05:24:24] 2026-03-11 04:23:26,147 | INFO     | overall cleanup function is called
[2026-03-11 05:24:24] 2026-03-11 04:23:27,155 | INFO     | --- collectZombieJob: --- 10, [4142907]
[2026-03-11 05:24:24] 2026-03-11 04:23:27,155 | INFO     | zombie collector waiting for pid 4142907
[2026-03-11 05:24:24] 2026-03-11 04:23:27,155 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-11 05:24:24] 2026-03-11 04:23:27,155 | INFO     | collected zombie processes
[2026-03-11 05:24:24] 2026-03-11 04:23:27,155 | INFO     | will attempt to kill all subprocesses of pid=4142907
[2026-03-11 05:24:24] 2026-03-11 04:23:28,409 | WARNING  | process 4142907 can no longer be monitored (due to stat problems) - aborting
[2026-03-11 05:24:24] 2026-03-11 04:23:28,456 | INFO     | process IDs to be killed: [4142907] (in reverse order)
[2026-03-11 05:24:24] 2026-03-11 04:23:28,724 | WARNING  | found no corresponding commands to process id(s)
[2026-03-11 05:24:24] 2026-03-11 04:23:28,725 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-11 05:24:24] 2026-03-11 04:23:28,786 | INFO     | did not find any defunct processes belonging to 4142907
[2026-03-11 05:24:24] 2026-03-11 04:23:28,805 | INFO     | using path: /var/lib/boinc/var/slot156/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-11 05:24:24] 2026-03-11 04:23:28,806 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot156/slots/0/PanDA_Pilot-7041481690/payload.stdout) since it has not been created yet
[2026-03-11 05:24:24] 2026-03-11 04:23:28,806 | INFO     | executing command: df -mP /var/lib/boinc/var/slot156/slots/0
[2026-03-11 05:24:24] 2026-03-11 04:23:28,820 | INFO     | sufficient remaining disk space (21360541696 B)
[2026-03-11 05:24:24] 2026-03-11 04:23:28,820 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-11 05:24:24] 2026-03-11 04:23:28,820 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot156/slots/0/PanDA_Pilot-7041481690/HITS.48955006._036878.pool.root.1 since it does not exist
[2026-03-11 05:24:24] 2026-03-11 04:23:28,827 | INFO     | did not find any defunct processes belonging to 4142907
[2026-03-11 05:24:24] 2026-03-11 04:23:28,827 | INFO     | ready for new job
[2026-03-11 05:24:24] 2026-03-11 04:23:28,828 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-11 05:24:24] 2026-03-11 04:23:28,828 | INFO     | **************************************
[2026-03-11 05:24:24] 2026-03-11 04:23:28,829 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-11 05:24:24] 2026-03-11 04:23:28,829 | INFO     | **************************************
[2026-03-11 05:24:24] 2026-03-11 04:23:28,829 | INFO     | 
[2026-03-11 05:24:24] 2026-03-11 04:23:28,832 | INFO     | architecture information:
[2026-03-11 05:24:24] 2026-03-11 04:23:28,833 | INFO     | executing command: cat /etc/os-release
[2026-03-11 05:24:24] 2026-03-11 04:23:28,844 | INFO     | cat /etc/os-release:
[2026-03-11 05:24:24] NAME="CentOS Linux"
[2026-03-11 05:24:24] VERSION="7 (Core)"
[2026-03-11 05:24:24] ID="centos"
[2026-03-11 05:24:24] ID_LIKE="rhel fedora"
[2026-03-11 05:24:24] VERSION_ID="7"
[2026-03-11 05:24:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-11 05:24:24] ANSI_COLOR="0;31"
[2026-03-11 05:24:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-11 05:24:24] HOME_URL="https://www.centos.org/"
[2026-03-11 05:24:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-11 05:24:24] 
[2026-03-11 05:24:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-11 05:24:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-11 05:24:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-11 05:24:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-11 05:24:24] 
[2026-03-11 05:24:24] 2026-03-11 04:23:28,844 | INFO     | **************************************
[2026-03-11 05:24:24] 2026-03-11 04:23:29,280 | INFO     | number of running child processes to parent process 4142907: 1
[2026-03-11 05:24:24] 2026-03-11 04:23:29,280 | INFO     | maximum number of monitored processes: 6
[2026-03-11 05:24:24] 2026-03-11 04:23:29,280 | INFO     | aborting job monitoring since job object (job id=7041481690) has expired
[2026-03-11 05:24:24] 2026-03-11 04:23:29,347 | INFO     | executing command: df -mP /var/lib/boinc/var/slot156/slots/0
[2026-03-11 05:24:24] 2026-03-11 04:23:29,365 | INFO     | sufficient remaining disk space (21361590272 B)
[2026-03-11 05:24:24] 2026-03-11 04:23:29,365 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-11 05:24:24] 2026-03-11 04:23:29,366 | INFO     | current server update state: UPDATING_FINAL
[2026-03-11 05:24:24] 2026-03-11 04:23:29,366 | INFO     | update_server=False
[2026-03-11 05:24:24] 2026-03-11 04:23:29,366 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-11 05:24:24] 2026-03-11 04:23:29,366 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-11 05:24:24] 2026-03-11 04:23:29,366 | INFO     | will abort loop
[2026-03-11 05:24:24] 2026-03-11 04:23:29,746 | INFO     | all data control threads have been joined
[2026-03-11 05:24:24] 2026-03-11 04:23:30,370 | INFO     | [job] retrieve thread has finished
[2026-03-11 05:24:24] 2026-03-11 04:23:30,371 | INFO     | [job] job monitor thread has finished
[2026-03-11 05:24:24] 2026-03-11 04:23:30,405 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 05:24:24] 2026-03-11 04:23:30,558 | INFO     | all payload control threads have been joined
[2026-03-11 05:24:24] 2026-03-11 04:23:30,751 | INFO     | [data] control thread has finished
[2026-03-11 05:24:24] 2026-03-11 04:23:30,950 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 05:24:24] 2026-03-11 04:23:31,059 | INFO     | all job control threads have been joined
[2026-03-11 05:24:24] 2026-03-11 04:23:31,139 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 05:24:24] 2026-03-11 04:23:31,330 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 05:24:24] 2026-03-11 04:23:31,330 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 05:24:24] 2026-03-11 04:23:31,510 | INFO     | [data] copytool_in thread has finished
[2026-03-11 05:24:24] 2026-03-11 04:23:31,563 | INFO     | [payload] control thread has finished
[2026-03-11 05:24:24] 2026-03-11 04:23:31,615 | INFO     | [job] validate thread has finished
[2026-03-11 05:24:24] 2026-03-11 04:23:31,658 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 05:24:24] 2026-03-11 04:23:31,738 | INFO     | [payload] validate_post thread has finished
[2026-03-11 05:24:24] 2026-03-11 04:23:31,751 | INFO     | [payload] failed_post thread has finished
[2026-03-11 05:24:24] 2026-03-11 04:23:31,759 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 05:24:24] 2026-03-11 04:23:32,064 | INFO     | [job] control thread has finished
[2026-03-11 05:24:24] 2026-03-11 04:23:32,144 | INFO     | [job] queue monitor thread has finished
[2026-03-11 05:24:24] 2026-03-11 04:23:32,410 | INFO     | [data] copytool_out thread has finished
[2026-03-11 05:24:24] 2026-03-11 04:23:34,955 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 05:24:24] 2026-03-11 04:23:46,862 | INFO     | [monitor] cgroup control has ended
[2026-03-11 05:24:24] 2026-03-11 04:23:48,827 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23447371282240)>', '<ExcThread(monitor, started 23447131662080)>']
[2026-03-11 05:24:24] 2026-03-11 04:23:53,852 | INFO     | all workflow threads have been joined
[2026-03-11 05:24:24] 2026-03-11 04:23:53,852 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 05:24:24] 2026-03-11 04:23:53,852 | INFO     | traces error code: 0
[2026-03-11 05:24:24] 2026-03-11 04:23:53,853 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 05:24:24] 2026-03-11 04:23:57,945 | INFO     | PID=4136380 has CPU usage=10.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-11 05:24:24] 2026-03-11 04:23:57,946 | INFO     | .. there are 47 such processes running
[2026-03-11 05:24:24] 2026-03-11 04:23:57,946 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 05:24:24] 2026-03-11 04:23:57,946 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 05:24:24] 2026-03-11 04:23:57,946 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 05:24:24] 2026-03-11 04:23:57,946 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 05:24:24] 2026-03-11 04:23:57,946 | INFO     | [monitor] control thread has ended
[2026-03-11 05:24:24] 2026-03-11 04:23:58,073 [wrapper] ==== pilot stdout END ====
[2026-03-11 05:24:24] 2026-03-11 04:23:58,075 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 05:24:24] 2026-03-11 04:23:58,078 [wrapper] pilotpid: 4136380
[2026-03-11 05:24:24] 2026-03-11 04:23:58,080 [wrapper] Pilot exit status: 0
[2026-03-11 05:24:24] 2026-03-11 04:23:58,088 [wrapper] pandaids: 7041481690
[2026-03-11 05:24:24] 2026-03-11 04:23:58,226 [wrapper] cleanup supervisor_pilot  707926 4136381
[2026-03-11 05:24:24] 2026-03-11 04:23:58,228 [wrapper] Test setup, not cleaning
[2026-03-11 05:24:24] 2026-03-11 04:23:58,230 [wrapper] apfmon messages muted
[2026-03-11 05:24:24] 2026-03-11 04:23:58,232 [wrapper] ==== wrapper stdout END ====
[2026-03-11 05:24:24] 2026-03-11 04:23:58,234 [wrapper] ==== wrapper stderr END ====
[2026-03-11 05:24:24]  *** Error codes and diagnostics ***
[2026-03-11 05:24:24]     "exeErrorCode": 0,
[2026-03-11 05:24:24]     "exeErrorDiag": "",
[2026-03-11 05:24:24]     "pilotErrorCode": 0,
[2026-03-11 05:24:24]     "pilotErrorDiag": "",
[2026-03-11 05:24:24]  *** Listing of results directory ***
[2026-03-11 05:24:24] total 615880
[2026-03-11 05:24:24] -rw-r--r--. 1 boinc boinc    584627 Mar 10 00:52 pilot3.tar.gz
[2026-03-11 05:24:24] -rwx------. 1 boinc boinc     36322 Mar 10 01:15 runpilot2-wrapper.sh
[2026-03-11 05:24:24] -rw-r--r--. 1 boinc boinc      5111 Mar 10 01:15 queuedata.json
[2026-03-11 05:24:24] -rw-r--r--. 1 boinc boinc       100 Mar 11 04:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 05:24:24] -rwxr-xr-x. 1 boinc boinc      7986 Mar 11 04:02 run_atlas
[2026-03-11 05:24:24] -rw-r--r--. 1 boinc boinc       105 Mar 11 04:02 job.xml
[2026-03-11 05:24:24] -rw-r--r--. 1 boinc boinc      6709 Mar 11 04:02 init_data.xml
[2026-03-11 05:24:24] -rw-r--r--. 2 boinc boinc 438034976 Mar 11 04:02 EVNT.46701403._000737.pool.root.1
[2026-03-11 05:24:24] -rw-r--r--. 2 boinc boinc     15845 Mar 11 04:02 start_atlas.sh
[2026-03-11 05:24:24] drwxrwx--x. 2 boinc boinc      4096 Mar 11 04:02 shared
[2026-03-11 05:24:24] -rw-r--r--. 2 boinc boinc    597960 Mar 11 04:02 input.tar.gz
[2026-03-11 05:24:24] -rw-r--r--. 1 boinc boinc         0 Mar 11 04:02 boinc_lockfile
[2026-03-11 05:24:24] -rw-r--r--. 1 boinc boinc      2565 Mar 11 04:02 pandaJob.out
[2026-03-11 05:24:24] -rw-------. 1 boinc boinc   1006644 Mar 11 04:02 agis_schedconf.cvmfs.json
[2026-03-11 05:24:24] -rw-------. 1 boinc boinc   1511578 Mar 11 04:02 agis_ddmendpoints.agis.ALL.json
[2026-03-11 05:24:24] -rw-------. 1 boinc boinc       445 Mar 11 04:02 workernode_map.json
[2026-03-11 05:24:24] drwx------. 5 boinc boinc      4096 Mar 11 04:02 pilot3
[2026-03-11 05:24:24] -rw-r--r--. 1 boinc boinc       530 Mar 11 05:22 boinc_task_state.xml
[2026-03-11 05:24:24] -rw-------. 1 boinc boinc 186678208 Mar 11 05:22 HITS.48955006._036878.pool.root.1
[2026-03-11 05:24:24] -rw-------. 1 boinc boinc      1031 Mar 11 05:23 memory_monitor_summary.json
[2026-03-11 05:24:24] -rw-------. 1 boinc boinc    303015 Mar 11 05:23 log.48955006._036878.job.log.tgz.1
[2026-03-11 05:24:24] -rw-------. 1 boinc boinc      6358 Mar 11 05:23 heartbeat.json
[2026-03-11 05:24:24] -rw-------. 1 boinc boinc       824 Mar 11 05:23 pilotlog.txt
[2026-03-11 05:24:24] -rw-------. 1 boinc boinc        95 Mar 11 05:23 pilot_heartbeat.json
[2026-03-11 05:24:24] -rw-------. 1 boinc boinc    708433 Mar 11 05:23 log.48955006._036878.job.log.1
[2026-03-11 05:24:24] -rw-------. 1 boinc boinc       357 Mar 11 05:23 output.list
[2026-03-11 05:24:24] -rw-r--r--. 1 boinc boinc       620 Mar 11 05:23 runtime_log
[2026-03-11 05:24:24] -rw-------. 1 boinc boinc   1024000 Mar 11 05:23 result.tar.gz
[2026-03-11 05:24:24] -rw-r--r--. 1 boinc boinc      9221 Mar 11 05:23 runtime_log.err
[2026-03-11 05:24:24] -rw-------. 1 boinc boinc       662 Mar 11 05:23 fiUMDmkvzJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmAEeLDmsXq28n.diag
[2026-03-11 05:24:24] -rw-r--r--. 1 boinc boinc        27 Mar 11 05:24 wrapper_checkpoint.txt
[2026-03-11 05:24:24] -rw-r--r--. 1 boinc boinc      8192 Mar 11 05:24 boinc_mmap_file
[2026-03-11 05:24:24] -rw-r--r--. 1 boinc boinc     21776 Mar 11 05:24 stderr.txt
[2026-03-11 05:24:24] HITS file was successfully produced:
[2026-03-11 05:24:24] -rw-------. 1 boinc boinc 186678208 Mar 11 05:22 shared/HITS.pool.root.1
[2026-03-11 05:24:24]  *** Contents of shared directory: ***
[2026-03-11 05:24:24] total 611684
[2026-03-11 05:24:24] -rw-r--r--. 2 boinc boinc 438034976 Mar 11 04:02 ATLAS.root_0
[2026-03-11 05:24:24] -rw-r--r--. 2 boinc boinc     15845 Mar 11 04:02 start_atlas.sh
[2026-03-11 05:24:24] -rw-r--r--. 2 boinc boinc    597960 Mar 11 04:02 input.tar.gz
[2026-03-11 05:24:24] -rw-------. 1 boinc boinc 186678208 Mar 11 05:22 HITS.pool.root.1
[2026-03-11 05:24:24] -rw-------. 1 boinc boinc   1024000 Mar 11 05:23 result.tar.gz
05:24:25 (4131829): run_atlas exited; CPU time 18583.669252
05:24:25 (4131829): called boinc_finish(0)

</stderr_txt>
]]>

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