Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:51:42 (89882): wrapper (7.7.26015): starting
15:51:42 (89882): wrapper: running run_atlas (--nthreads 12)
[2026-03-10 15:51:42] Arguments: --nthreads 12
[2026-03-10 15:51:42] Threads: 12
[2026-03-10 15:51:42] Checking for CVMFS
[2026-03-10 15:51:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-10 15:51:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-10 15:51:43] Running cvmfs_config stat atlas.cern.ch
[2026-03-10 15:51:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-10 15:51:43] 2.11.5.0 3627452 178458 186168 157132 0 555 33970207 45568000 22578 130560 0 1597362139 99.821 883975272 23397 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2026-03-10 15:51:43] CVMFS is ok
[2026-03-10 15:51:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 15:51:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 15:51:43] Further information can be found at the LHC@home message board.
[2026-03-10 15:51:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 15:51:43] Checking for apptainer binary...
[2026-03-10 15:51:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-10 15:51:43] Running /usr/bin/apptainer --version
[2026-03-10 15:51:43] apptainer version 1.4.1-1.el9
[2026-03-10 15:51:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 15:51:44] wns0050.triumf.lcg
[2026-03-10 15:51:44] apptainer works
[2026-03-10 15:51:44] Set ATHENA_PROC_NUMBER=12
[2026-03-10 15:51:44] Set ATHENA_CORE_NUMBER=12
[2026-03-10 15:51:44] Starting ATLAS job with PandaID=7049162641
[2026-03-10 15:51:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 15:56:32]  *** The last 200 lines of the pilot log: ***
[2026-03-10 15:56:32] 2026-03-10 22:55:49,713 | WARNING  | wrong length of table data, x=[1773183195.0], y=[29294.0] (must be same and length>=4)
[2026-03-10 15:56:32] 2026-03-10 22:55:49,713 | INFO     | could have reported an average CPU frequency of 2771 MHz (4 samples)
[2026-03-10 15:56:32] 2026-03-10 22:55:49,713 | INFO     | ..............................
[2026-03-10 15:56:32] 2026-03-10 22:55:49,713 | INFO     | . Timing measurements:
[2026-03-10 15:56:32] 2026-03-10 22:55:49,713 | INFO     | . get job = 0 s
[2026-03-10 15:56:32] 2026-03-10 22:55:49,713 | INFO     | . initial setup = 18 s
[2026-03-10 15:56:32] 2026-03-10 22:55:49,713 | INFO     | . payload setup = 24 s
[2026-03-10 15:56:32] 2026-03-10 22:55:49,713 | INFO     | . stage-in = 0 s
[2026-03-10 15:56:32] 2026-03-10 22:55:49,713 | INFO     | . payload execution = 55 s
[2026-03-10 15:56:32] 2026-03-10 22:55:49,714 | INFO     | . stage-out = 0 s
[2026-03-10 15:56:32] 2026-03-10 22:55:49,714 | INFO     | . log creation = 0 s
[2026-03-10 15:56:32] 2026-03-10 22:55:49,714 | INFO     | ..............................
[2026-03-10 15:56:32] 2026-03-10 22:55:49,714 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-10 15:56:32] 2026-03-10 22:55:49,714 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7049162641/pilotlog.txt
[2026-03-10 15:56:32] 2026-03-10 22:55:49,777 | INFO     | monitor loop #59: job 0:7049162641 is in state 'failed'
[2026-03-10 15:56:32] 2026-03-10 22:55:49,777 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-03-10 15:56:32] 2026-03-10 22:55:49,794 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-10 15:56:32] - Log from pilotlog.txt -
[2026-03-10 15:56:32] 2026-03-10 22:55:49,712 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 15:56:32] 2026-03-10 22:55:49,712 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 15:56:32] 2026-03-10 22:55:49,712 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 15:56:32] 2026-03-10 22:55:49,713 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 15:56:32] 2026-03-10 22:55:49,713 | WARNING  | wrong length of table data, x=[1773183195.0], y=[29294.0] (must be same and length>=4)
[2026-03-10 15:56:32] 2026-03-10 22:55:49,713 | INFO     | could have reported an average CPU frequency of 2771 MHz (4 samples)
[2026-03-10 15:56:32] 2026-03-10 22:55:49,713 | INFO     | ..............................
[2026-03-10 15:56:32] 2026-03-10 22:55:49,713 | INFO     | . Timing measurements:
[2026-03-10 15:56:32] 2026-03-10 22:55:49,713 | INFO     | . get job = 0 s
[2026-03-10 15:56:32] 2026-03-10 22:55:49,713 | INFO     | . initial setup = 18 s
[2026-03-10 15:56:32] 2026-03-10 22:55:49,713 | INFO     | . payload setup = 24 s
[2026-03-10 15:56:32] 2026-03-10 22:55:49,713 | INFO     | . stage-in = 0 s
[2026-03-10 15:56:32] 2026-03-10 22:55:49,713 | INFO     | . payload execution = 55 s
[2026-03-10 15:56:32] 2026-03-10 22:55:49,714 | INFO     | . stage-out = 0 s
[2026-03-10 15:56:32] 2026-03-10 22:55:49,714 | INFO     | . log creation = 0 s
[2026-03-10 15:56:32] 2026-03-10 22:55:49,714 | INFO     | ..............................
[2026-03-10 15:56:32] 2026-03-10 22:55:49,714 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-10 15:56:32] 2026-03-10 22:55:49,714 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7049162641/pilotlog.txt
[2026-03-10 15:56:32] 2026-03-10 22:55:49,777 | INFO     | monitor loop #59: job 0:7049162641 is in state 'failed'
[2026-03-10 15:56:32] 2026-03-10 22:55:49,777 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-03-10 15:56:32] 2026-03-10 22:55:49,794 | WARNING  | 
[2026-03-10 15:56:32] [begin log extracts]
[2026-03-10 15:56:32] - Log from pilotlog.txt -
[2026-03-10 15:56:32] 2026-03-10 22:55:49,712 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 15:56:32] 2026-03-10 22:55:49,712 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 15:56:32] 2026-03-10 22:55:49,712 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 15:56:32] 2026-03-10 22:55:49,713 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 15:56:32] 2026-03-10 22:55:49,713 | WARNING  | wrong length of table data, x=[1773183195.0], y=[29294.0] (must be same and length>=4)
[2026-03-10 15:56:32] 2026-03-10 22:55:49,713 | INFO     | could have reported an average CPU frequency of 2771 MHz (4 samples)
[2026-03-10 15:56:32] 2026-03-10 22:55:49,713 | INFO     | ..............................
[2026-03-10 15:56:32] 2026-03-10 22:55:49,713 | INFO     | . Timing measurements:
[2026-03-10 15:56:32] 2026-03-10 22:55:49,713 | INFO     | . get job = 0 s
[2026-03-10 15:56:32] 2026-03-10 22:55:49,713 | INFO     | . initial setup = 18 s
[2026-03-10 15:56:32] 2026-03-10 22:55:49,713 | INFO     | . payload setup = 24 s
[2026-03-10 15:56:32] 2026-03-10 22:55:49,713 | INFO     | . stage-in = 0 s
[2026-03-10 15:56:32] 2026-03-10 22:55:49,713 | INFO     | . payload execution = 55 s
[2026-03-10 15:56:32] 2026-03-10 22:55:49,714 | INFO     | . stage-out = 0 s
[2026-03-10 15:56:32] 2026-03-10 22:55:49,714 | INFO     | . log creation = 0 s
[2026-03-10 15:56:32] 2026-03-10 22:55:49,714 | INFO     | ..............................
[2026-03-10 15:56:32] 2026-03-10 22:55:49,714 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-10 15:56:32] 2026-03-10 22:55:49,714 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7049162641/pilotlog.txt
[2026-03-10 15:56:32] 2026-03-10 22:55:49,777 | INFO     | monitor loop #59: job 0:7049162641 is in state 'failed'
[2026-03-10 15:56:32] 2026-03-10 22:55:49,777 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-03-10 15:56:32] [end log extracts]
[2026-03-10 15:56:32] 2026-03-10 22:55:49,794 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-10 15:56:32] 2026-03-10 22:55:49,795 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-10 15:56:32] 2026-03-10 22:55:50,325 | INFO     | 
[2026-03-10 15:56:32] 2026-03-10 22:55:50,325 | INFO     | job summary report
[2026-03-10 15:56:32] 2026-03-10 22:55:50,325 | INFO     | --------------------------------------------------
[2026-03-10 15:56:32] 2026-03-10 22:55:50,325 | INFO     | PanDA job id: 7049162641
[2026-03-10 15:56:32] 2026-03-10 22:55:50,325 | INFO     | task id: 48967011
[2026-03-10 15:56:32] 2026-03-10 22:55:50,325 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-10 15:53:42,366 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-10 15:56:32] 2026-03-10 22:55:50,325 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 15:56:32] 2026-03-10 22:55:50,325 | INFO     | pilot state: failed 
[2026-03-10 15:56:32] 2026-03-10 22:55:50,325 | INFO     | transexitcode: 65
[2026-03-10 15:56:32] 2026-03-10 22:55:50,325 | INFO     | exeerrorcode: 65
[2026-03-10 15:56:32] 2026-03-10 22:55:50,325 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-10 15:56:32] 2026-03-10 22:55:50,325 | INFO     | exitcode: 65
[2026-03-10 15:56:32] 2026-03-10 22:55:50,325 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-10 15:56:32] 2026-03-10 22:55:50,325 | INFO     | cpuconsumptiontime: 14 s
[2026-03-10 15:56:32] 2026-03-10 22:55:50,325 | INFO     | nevents: 0
[2026-03-10 15:56:32] 2026-03-10 22:55:50,325 | INFO     | neventsw: 0
[2026-03-10 15:56:32] 2026-03-10 22:55:50,326 | INFO     | pid: 98629
[2026-03-10 15:56:32] 2026-03-10 22:55:50,326 | INFO     | pgrp: 98629
[2026-03-10 15:56:32] 2026-03-10 22:55:50,326 | INFO     | corecount: 12
[2026-03-10 15:56:32] 2026-03-10 22:55:50,326 | INFO     | event service: False
[2026-03-10 15:56:32] 2026-03-10 22:55:50,326 | INFO     | sizes: {0: 2279802, 1: 2280263, 84: 2303570, 85: 2303606, 87: 2307954, 203: 2308092}
[2026-03-10 15:56:32] 2026-03-10 22:55:50,326 | INFO     | --------------------------------------------------
[2026-03-10 15:56:32] 2026-03-10 22:55:50,326 | INFO     | 
[2026-03-10 15:56:32] 2026-03-10 22:55:50,326 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-10 15:56:32] 2026-03-10 22:55:50,452 | INFO     | time since job start (205s) is within the limit (345600.0s)
[2026-03-10 15:56:32] 2026-03-10 22:55:50,455 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 15:56:32] 2026-03-10 22:55:50,455 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 15:56:32] 2026-03-10 22:55:50,455 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 15:56:32] 2026-03-10 22:55:50,455 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 15:56:32] 2026-03-10 22:55:50,455 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 15:56:32] 2026-03-10 22:55:50,455 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 15:56:32] 2026-03-10 22:55:50,455 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 15:56:32] 2026-03-10 22:55:50,459 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 15:56:32] 2026-03-10 22:55:50,459 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 15:56:32] 2026-03-10 22:55:50,459 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 15:56:32] 2026-03-10 22:55:50,459 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 15:56:32] 2026-03-10 22:55:50,459 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 15:56:32] 2026-03-10 22:55:50,459 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 15:56:32] 2026-03-10 22:55:50,459 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 15:56:32] 2026-03-10 22:55:50,459 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 15:56:32] 2026-03-10 22:55:50,459 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 15:56:32] 2026-03-10 22:55:50,459 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 15:56:32] 2026-03-10 22:55:50,459 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 15:56:32] 2026-03-10 22:55:50,459 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 15:56:32] 2026-03-10 22:55:50,459 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 15:56:32] 2026-03-10 22:55:50,459 | INFO     | job 7049162641 has completed (purged errors)
[2026-03-10 15:56:32] 2026-03-10 22:55:50,459 | INFO     | overall cleanup function is called
[2026-03-10 15:56:32] 2026-03-10 22:55:51,466 | INFO     | --- collectZombieJob: --- 10, [98629]
[2026-03-10 15:56:32] 2026-03-10 22:55:51,466 | INFO     | zombie collector waiting for pid 98629
[2026-03-10 15:56:32] 2026-03-10 22:55:51,466 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 15:56:32] 2026-03-10 22:55:51,466 | INFO     | collected zombie processes
[2026-03-10 15:56:32] 2026-03-10 22:55:51,466 | INFO     | will attempt to kill all subprocesses of pid=98629
[2026-03-10 15:56:32] 2026-03-10 22:55:52,811 | INFO     | process IDs to be killed: [98629] (in reverse order)
[2026-03-10 15:56:32] 2026-03-10 22:55:52,968 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 15:56:32] 2026-03-10 22:55:52,969 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 15:56:32] 2026-03-10 22:55:53,049 | INFO     | did not find any defunct processes belonging to 98629
[2026-03-10 15:56:32] 2026-03-10 22:55:53,109 | INFO     | did not find any defunct processes belonging to 98629
[2026-03-10 15:56:32] 2026-03-10 22:55:53,109 | INFO     | ready for new job
[2026-03-10 15:56:32] 2026-03-10 22:55:53,110 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 15:56:32] 2026-03-10 22:55:53,139 | INFO     | **************************************
[2026-03-10 15:56:32] 2026-03-10 22:55:53,139 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-10 15:56:32] 2026-03-10 22:55:53,139 | INFO     | **************************************
[2026-03-10 15:56:32] 2026-03-10 22:55:53,139 | INFO     | 
[2026-03-10 15:56:32] 2026-03-10 22:55:53,141 | INFO     | architecture information:
[2026-03-10 15:56:32] 2026-03-10 22:55:53,148 | INFO     | executing command: cat /etc/os-release
[2026-03-10 15:56:32] 2026-03-10 22:55:53,203 | INFO     | cat /etc/os-release:
[2026-03-10 15:56:32] NAME="CentOS Linux"
[2026-03-10 15:56:32] VERSION="7 (Core)"
[2026-03-10 15:56:32] ID="centos"
[2026-03-10 15:56:32] ID_LIKE="rhel fedora"
[2026-03-10 15:56:32] VERSION_ID="7"
[2026-03-10 15:56:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 15:56:32] ANSI_COLOR="0;31"
[2026-03-10 15:56:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 15:56:32] HOME_URL="https://www.centos.org/"
[2026-03-10 15:56:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 15:56:32] 
[2026-03-10 15:56:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 15:56:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 15:56:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 15:56:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 15:56:32] 
[2026-03-10 15:56:32] 2026-03-10 22:55:53,203 | INFO     | **************************************
[2026-03-10 15:56:32] 2026-03-10 22:55:53,707 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-10 15:56:32] 2026-03-10 22:55:53,743 | INFO     | sufficient remaining disk space (1907751911424 B)
[2026-03-10 15:56:32] 2026-03-10 22:55:53,743 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 15:56:32] 2026-03-10 22:55:53,743 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 15:56:32] 2026-03-10 22:55:53,743 | INFO     | update_server=False
[2026-03-10 15:56:32] 2026-03-10 22:55:53,744 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 15:56:32] 2026-03-10 22:55:53,744 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 15:56:32] 2026-03-10 22:55:53,744 | INFO     | aborting loop
[2026-03-10 15:56:32] 2026-03-10 22:55:53,745 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 15:56:32] 2026-03-10 22:55:54,150 | INFO     | all data control threads have been joined
[2026-03-10 15:56:32] 2026-03-10 22:55:54,475 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 15:56:32] 2026-03-10 22:55:54,750 | INFO     | [job] retrieve thread has finished
[2026-03-10 15:56:32] 2026-03-10 22:55:54,750 | INFO     | [job] job monitor thread has finished
[2026-03-10 15:56:32] 2026-03-10 22:55:54,772 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 15:56:32] 2026-03-10 22:55:55,156 | INFO     | [data] control thread has finished
[2026-03-10 15:56:32] 2026-03-10 22:55:55,205 | INFO     | all payload control threads have been joined
[2026-03-10 15:56:32] 2026-03-10 22:55:55,290 | INFO     | all job control threads have been joined
[2026-03-10 15:56:32] 2026-03-10 22:55:55,291 | INFO     | [data] copytool_in thread has finished
[2026-03-10 15:56:32] 2026-03-10 22:55:55,337 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 15:56:32] 2026-03-10 22:55:55,423 | INFO     | [payload] failed_post thread has finished
[2026-03-10 15:56:32] 2026-03-10 22:55:55,710 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 15:56:32] 2026-03-10 22:55:55,825 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 15:56:32] 2026-03-10 22:55:55,835 | INFO     | [job] validate thread has finished
[2026-03-10 15:56:32] 2026-03-10 22:55:56,004 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 15:56:32] 2026-03-10 22:55:56,074 | INFO     | [payload] validate_post thread has finished
[2026-03-10 15:56:32] 2026-03-10 22:55:56,211 | INFO     | [payload] control thread has finished
[2026-03-10 15:56:32] 2026-03-10 22:55:56,296 | INFO     | [job] control thread has finished
[2026-03-10 15:56:32] 2026-03-10 22:55:56,342 | INFO     | [job] queue monitor thread has finished
[2026-03-10 15:56:32] 2026-03-10 22:55:56,482 | INFO     | [data] copytool_out thread has finished
[2026-03-10 15:56:32] 2026-03-10 22:55:57,754 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 15:56:32] 2026-03-10 22:56:24,480 | INFO     | PID=93796 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-10 15:56:32] 2026-03-10 22:56:24,480 | INFO     | .. there are 35 such processes running
[2026-03-10 15:56:32] 2026-03-10 22:56:24,481 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 15:56:32] 2026-03-10 22:56:24,481 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 15:56:32] 2026-03-10 22:56:24,481 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 15:56:32] 2026-03-10 22:56:25,558 | INFO     | [monitor] cgroup control has ended
[2026-03-10 15:56:32] 2026-03-10 22:56:26,059 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140199134734144)>', '<ExcThread(monitor, started 140197991802624)>']
[2026-03-10 15:56:32] 2026-03-10 22:56:26,506 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 15:56:32] 2026-03-10 22:56:26,506 | INFO     | [monitor] control thread has ended
[2026-03-10 15:56:32] 2026-03-10 22:56:31,085 | INFO     | all workflow threads have been joined
[2026-03-10 15:56:32] 2026-03-10 22:56:31,085 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 15:56:32] 2026-03-10 22:56:31,085 | INFO     | traces error code: 0
[2026-03-10 15:56:32] 2026-03-10 22:56:31,085 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 15:56:32] 2026-03-10 22:56:31,533 [wrapper] ==== pilot stdout END ====
[2026-03-10 15:56:32] 2026-03-10 22:56:31,556 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 15:56:32] 2026-03-10 22:56:31,592 [wrapper] pilotpid: 93796
[2026-03-10 15:56:32] 2026-03-10 22:56:31,608 [wrapper] Pilot exit status: 0
[2026-03-10 15:56:32] 2026-03-10 22:56:31,695 [wrapper] pandaids: 7049162641
[2026-03-10 15:56:32] 2026-03-10 22:56:31,779 [wrapper] cleanup supervisor_pilot   93802 93797
[2026-03-10 15:56:32] 2026-03-10 22:56:31,783 [wrapper] Test setup, not cleaning
[2026-03-10 15:56:32] 2026-03-10 22:56:31,798 [wrapper] apfmon messages muted
[2026-03-10 15:56:32] 2026-03-10 22:56:31,815 [wrapper] ==== wrapper stdout END ====
[2026-03-10 15:56:32] 2026-03-10 22:56:31,822 [wrapper] ==== wrapper stderr END ====
[2026-03-10 15:56:32]  *** Error codes and diagnostics ***
[2026-03-10 15:56:32]     "exeErrorCode": 65,
[2026-03-10 15:56:32]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-10 15:56:32]     "pilotErrorCode": 1305,
[2026-03-10 15:56:32]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-10 15:56:32]  *** Listing of results directory ***
[2026-03-10 15:56:32] total 219052
[2026-03-10 15:56:32] -rw-r--r--. 1 boinc boinc      5111 Mar 10 12:17 queuedata.json
[2026-03-10 15:56:32] -rw-r--r--. 1 boinc boinc    585013 Mar 10 12:17 pilot3.tar.gz
[2026-03-10 15:56:32] -rwx------. 1 boinc boinc     36322 Mar 10 12:17 runpilot2-wrapper.sh
[2026-03-10 15:56:32] -rw-r--r--. 1 boinc boinc       100 Mar 10 15:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 15:56:32] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 15:51 run_atlas
[2026-03-10 15:56:32] -rw-r--r--. 1 boinc boinc       105 Mar 10 15:51 job.xml
[2026-03-10 15:56:32] -rw-r--r--. 1 boinc boinc      6593 Mar 10 15:51 init_data.xml
[2026-03-10 15:56:32] -rw-r--r--. 2 boinc boinc 220160724 Mar 10 15:51 EVNT.48967008._000183.pool.root.1
[2026-03-10 15:56:32] -rw-r--r--. 2 boinc boinc    597521 Mar 10 15:51 input.tar.gz
[2026-03-10 15:56:32] -rw-r--r--. 2 boinc boinc     15845 Mar 10 15:51 start_atlas.sh
[2026-03-10 15:56:32] drwxrwx--x. 2 boinc boinc      4096 Mar 10 15:51 shared
[2026-03-10 15:56:32] -rw-r--r--. 1 boinc boinc         0 Mar 10 15:51 boinc_lockfile
[2026-03-10 15:56:32] -rw-r--r--. 1 boinc boinc      2561 Mar 10 15:51 pandaJob.out
[2026-03-10 15:56:32] -rw-------. 1 boinc boinc   1006644 Mar 10 15:52 agis_schedconf.cvmfs.json
[2026-03-10 15:56:32] -rw-------. 1 boinc boinc   1511578 Mar 10 15:52 agis_ddmendpoints.agis.ALL.json
[2026-03-10 15:56:32] -rw-------. 1 boinc boinc       445 Mar 10 15:52 workernode_map.json
[2026-03-10 15:56:32] drwx------. 5 boinc boinc      4096 Mar 10 15:52 pilot3
[2026-03-10 15:56:32] -rw-r--r--. 1 boinc boinc       524 Mar 10 15:53 boinc_task_state.xml
[2026-03-10 15:56:32] -rw-------. 1 boinc boinc       965 Mar 10 15:53 memory_monitor_summary.json
[2026-03-10 15:56:32] -rw-------. 1 boinc boinc     21626 Mar 10 15:53 log.48967011._004697.job.log.tgz.1
[2026-03-10 15:56:32] -rw-------. 1 boinc boinc      7051 Mar 10 15:55 heartbeat.json
[2026-03-10 15:56:32] -rw-------. 1 boinc boinc        95 Mar 10 15:56 pilot_heartbeat.json
[2026-03-10 15:56:32] -rw-r--r--. 1 boinc boinc        22 Mar 10 15:56 wrapper_checkpoint.txt
[2026-03-10 15:56:32] -rw-r--r--. 1 boinc boinc      8192 Mar 10 15:56 boinc_mmap_file
[2026-03-10 15:56:32] -rw-------. 1 boinc boinc      4817 Mar 10 15:56 pilotlog.txt
[2026-03-10 15:56:32] -rw-------. 1 boinc boinc     86656 Mar 10 15:56 log.48967011._004697.job.log.1
[2026-03-10 15:56:32] -rw-------. 1 boinc boinc       188 Mar 10 15:56 output.list
[2026-03-10 15:56:32] -rw-r--r--. 1 boinc boinc       620 Mar 10 15:56 runtime_log
[2026-03-10 15:56:32] -rw-------. 1 boinc boinc    122880 Mar 10 15:56 result.tar.gz
[2026-03-10 15:56:32] -rw-r--r--. 1 boinc boinc      8635 Mar 10 15:56 runtime_log.err
[2026-03-10 15:56:32] -rw-------. 1 boinc boinc       643 Mar 10 15:56 oVkNDm8kHK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmGAeLDmT8PDpm.diag
[2026-03-10 15:56:32] -rw-r--r--. 1 boinc boinc     21805 Mar 10 15:56 stderr.txt
[2026-03-10 15:56:32] No HITS result produced
[2026-03-10 15:56:32]  *** Contents of shared directory: ***
[2026-03-10 15:56:32] total 215728
[2026-03-10 15:56:32] -rw-r--r--. 2 boinc boinc 220160724 Mar 10 15:51 ATLAS.root_0
[2026-03-10 15:56:32] -rw-r--r--. 2 boinc boinc    597521 Mar 10 15:51 input.tar.gz
[2026-03-10 15:56:32] -rw-r--r--. 2 boinc boinc     15845 Mar 10 15:51 start_atlas.sh
[2026-03-10 15:56:32] -rw-------. 1 boinc boinc    122880 Mar 10 15:56 result.tar.gz
15:56:34 (89882): run_atlas exited; CPU time 20.760404
15:56:34 (89882): called boinc_finish(0)

</stderr_txt>
]]>

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