Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:53:13 (3262567): wrapper (7.7.26015): starting
13:53:13 (3262567): wrapper: running run_atlas (--nthreads 4)
[2026-03-11 13:53:13] Arguments: --nthreads 4
[2026-03-11 13:53:13] Threads: 4
[2026-03-11 13:53:13] Checking for CVMFS
[2026-03-11 13:53:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 13:53:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 13:53:14] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 13:53:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 13:53:14] 2.9.2.0 3122 19242 101872 157155 2 50 30958515 36864000 0 130560 0 9027503 99.985 715893 8818 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-11 13:53:14] CVMFS is ok
[2026-03-11 13:53:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 13:53:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-11 13:53:14] Further information can be found at the LHC@home message board.
[2026-03-11 13:53:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 13:53:14] Checking for apptainer binary...
[2026-03-11 13:53:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 13:53:14] Running /usr/bin/apptainer --version
[2026-03-11 13:53:14] apptainer version 1.4.1-1.1
[2026-03-11 13:53:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 13:53:14] atlasA139
[2026-03-11 13:53:14] apptainer works
[2026-03-11 13:53:14] Set ATHENA_PROC_NUMBER=4
[2026-03-11 13:53:14] Set ATHENA_CORE_NUMBER=4
[2026-03-11 13:53:14] Starting ATLAS job with PandaID=7036032118
[2026-03-11 13:53:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 15:18:39]  *** The last 200 lines of the pilot log: ***
[2026-03-11 15:18:39] 2026-03-11 14:17:33,615 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-11 15:18:39] 2026-03-11 14:17:33,615 | INFO     | **************************************
[2026-03-11 15:18:39] 2026-03-11 14:17:33,615 | INFO     | 
[2026-03-11 15:18:39] 2026-03-11 14:17:33,616 | INFO     | architecture information:
[2026-03-11 15:18:39] 2026-03-11 14:17:33,616 | INFO     | executing command: cat /etc/os-release
[2026-03-11 15:18:39] 2026-03-11 14:17:33,630 | INFO     | cat /etc/os-release:
[2026-03-11 15:18:39] NAME="CentOS Linux"
[2026-03-11 15:18:39] VERSION="7 (Core)"
[2026-03-11 15:18:39] ID="centos"
[2026-03-11 15:18:39] ID_LIKE="rhel fedora"
[2026-03-11 15:18:39] VERSION_ID="7"
[2026-03-11 15:18:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-11 15:18:39] ANSI_COLOR="0;31"
[2026-03-11 15:18:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-11 15:18:39] HOME_URL="https://www.centos.org/"
[2026-03-11 15:18:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-11 15:18:39] 
[2026-03-11 15:18:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-11 15:18:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-11 15:18:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-11 15:18:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-11 15:18:39] 
[2026-03-11 15:18:39] 2026-03-11 14:17:33,630 | INFO     | **************************************
[2026-03-11 15:18:39] 2026-03-11 14:17:34,133 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-11 15:18:39] 2026-03-11 14:17:34,152 | INFO     | sufficient remaining disk space (327318241280 B)
[2026-03-11 15:18:39] 2026-03-11 14:17:34,152 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-11 15:18:39] 2026-03-11 14:17:34,152 | INFO     | current server update state: UPDATING_FINAL
[2026-03-11 15:18:39] 2026-03-11 14:17:34,152 | INFO     | update_server=False
[2026-03-11 15:18:39] 2026-03-11 14:17:34,152 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-11 15:18:39] 2026-03-11 14:17:34,152 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 15:18:39] 2026-03-11 14:17:34,152 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 15:18:39] 2026-03-11 14:17:34,152 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-11 15:18:39] 2026-03-11 14:17:34,153 | INFO     | will abort loop
[2026-03-11 15:18:39] 2026-03-11 14:17:34,815 | INFO     | all data control threads have been joined
[2026-03-11 15:18:39] 2026-03-11 14:17:34,956 | INFO     | all job control threads have been joined
[2026-03-11 15:18:39] 2026-03-11 14:17:35,045 | INFO     | all payload control threads have been joined
[2026-03-11 15:18:39] 2026-03-11 14:17:35,123 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 15:18:39] 2026-03-11 14:17:35,158 | INFO     | [job] retrieve thread has finished
[2026-03-11 15:18:39] 2026-03-11 14:17:35,158 | INFO     | [job] queue monitor thread has finished
[2026-03-11 15:18:39] 2026-03-11 14:17:35,158 | INFO     | [job] job monitor thread has finished
[2026-03-11 15:18:39] 2026-03-11 14:17:35,625 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 15:18:39] 2026-03-11 14:17:35,652 | INFO     | [job] validate thread has finished
[2026-03-11 15:18:39] 2026-03-11 14:17:35,717 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 15:18:39] 2026-03-11 14:17:35,758 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 15:18:39] 2026-03-11 14:17:35,821 | INFO     | [data] control thread has finished
[2026-03-11 15:18:39] 2026-03-11 14:17:35,955 | INFO     | [data] copytool_in thread has finished
[2026-03-11 15:18:39] 2026-03-11 14:17:35,961 | INFO     | [job] control thread has finished
[2026-03-11 15:18:39] 2026-03-11 14:17:36,051 | INFO     | [payload] control thread has finished
[2026-03-11 15:18:39] 2026-03-11 14:17:36,055 | INFO     | [payload] failed_post thread has finished
[2026-03-11 15:18:39] 2026-03-11 14:17:36,609 | INFO     | [payload] validate_post thread has finished
[2026-03-11 15:18:39] 2026-03-11 14:17:37,129 | INFO     | [data] copytool_out thread has finished
[2026-03-11 15:18:39] 2026-03-11 14:17:38,159 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 15:18:39] 2026-03-11 14:17:44,791 | INFO     | job.realtimelogging is not enabled
[2026-03-11 15:18:39] 2026-03-11 14:17:45,797 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 15:18:39] 2026-03-11 14:18:04,301 | INFO     | PID=3266682 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-11 15:18:39] 2026-03-11 14:18:04,301 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 15:18:39] 2026-03-11 14:18:04,301 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 15:18:39] 2026-03-11 14:18:04,301 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 15:18:39] 2026-03-11 14:18:32,884 | INFO     | [monitor] cgroup control has ended
[2026-03-11 15:18:39] 2026-03-11 14:18:34,477 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140536097888064)>', '<ExcThread(monitor, started 140534995732224)>']
[2026-03-11 15:18:39] 2026-03-11 14:18:35,463 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 15:18:39] 2026-03-11 14:18:35,464 | INFO     | [monitor] control thread has ended
[2026-03-11 15:18:39] 2026-03-11 14:18:39,495 | INFO     | all workflow threads have been joined
[2026-03-11 15:18:39] 2026-03-11 14:18:39,495 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 15:18:39] 2026-03-11 14:18:39,496 | INFO     | traces error code: 0
[2026-03-11 15:18:39] 2026-03-11 14:18:39,496 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 15:18:39] 2026-03-11 14:18:39,564 [wrapper] ==== pilot stdout END ====
[2026-03-11 15:18:39] 2026-03-11 14:18:39,568 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 15:18:39] 2026-03-11 14:18:39,572 [wrapper] pilotpid: 3266682
[2026-03-11 15:18:39] 2026-03-11 14:18:39,576 [wrapper] Pilot exit status: 0
[2026-03-11 15:18:39] 2026-03-11 14:18:39,588 [wrapper] pandaids: 7036032118
[2026-03-11 15:18:39] 2026-03-11 14:18:39,612 [wrapper] cleanup supervisor_pilot 3276401 3266683
[2026-03-11 15:18:39] 2026-03-11 14:18:39,616 [wrapper] Test setup, not cleaning
[2026-03-11 15:18:39] 2026-03-11 14:18:39,619 [wrapper] apfmon messages muted
[2026-03-11 15:18:39] 2026-03-11 14:18:39,622 [wrapper] ==== wrapper stdout END ====
[2026-03-11 15:18:39] 2026-03-11 14:18:39,626 [wrapper] ==== wrapper stderr END ====
[2026-03-11 15:18:39]  *** Error codes and diagnostics ***
[2026-03-11 15:18:39]     "exeErrorCode": 0,
[2026-03-11 15:18:39]     "exeErrorDiag": "",
[2026-03-11 15:18:39]     "pilotErrorCode": 0,
[2026-03-11 15:18:39]     "pilotErrorDiag": "",
[2026-03-11 15:18:39]  *** Listing of results directory ***
[2026-03-11 15:18:39] total 505744
[2026-03-11 15:18:39] -rw-r--r-- 1 boinc boinc    584627 Mar  2 15:48 pilot3.tar.gz
[2026-03-11 15:18:39] -rwx------ 1 boinc boinc     36322 Mar  2 16:01 runpilot2-wrapper.sh
[2026-03-11 15:18:39] -rw-r--r-- 1 boinc boinc      5111 Mar  2 16:01 queuedata.json
[2026-03-11 15:18:39] -rw-r--r-- 1 boinc boinc       100 Mar 11 13:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 15:18:39] -rwxr-xr-x 1 boinc boinc      7986 Mar 11 13:53 run_atlas
[2026-03-11 15:18:39] -rw-r--r-- 1 boinc boinc       105 Mar 11 13:53 job.xml
[2026-03-11 15:18:39] -rw-r--r-- 2 boinc boinc 283314181 Mar 11 13:53 EVNT.48220101._000244.pool.root.1
[2026-03-11 15:18:39] -rw-r--r-- 2 boinc boinc    597969 Mar 11 13:53 input.tar.gz
[2026-03-11 15:18:39] -rw-r--r-- 2 boinc boinc     15845 Mar 11 13:53 start_atlas.sh
[2026-03-11 15:18:39] drwxrwx--x 2 boinc boinc      4096 Mar 11 13:53 shared
[2026-03-11 15:18:39] -rw-r--r-- 1 boinc boinc         0 Mar 11 13:53 boinc_setup_complete
[2026-03-11 15:18:39] -rw-r--r-- 1 boinc boinc      6372 Mar 11 13:53 init_data.xml
[2026-03-11 15:18:39] -rw-r--r-- 1 boinc boinc         0 Mar 11 13:53 boinc_lockfile
[2026-03-11 15:18:39] -rw-r--r-- 1 boinc boinc      2580 Mar 11 13:53 pandaJob.out
[2026-03-11 15:18:39] -rw------- 1 boinc boinc   1007016 Mar 11 13:53 agis_schedconf.cvmfs.json
[2026-03-11 15:18:39] -rw------- 1 boinc boinc   1511578 Mar 11 13:53 agis_ddmendpoints.agis.ALL.json
[2026-03-11 15:18:39] -rw------- 1 boinc boinc       424 Mar 11 13:53 workernode_map.json
[2026-03-11 15:18:39] drwx------ 5 boinc boinc      4096 Mar 11 13:53 pilot3
[2026-03-11 15:18:39] -rw------- 1 boinc boinc 228626371 Mar 11 15:17 HITS.48838432._006450.pool.root.1
[2026-03-11 15:18:39] -rw-r--r-- 1 boinc boinc       529 Mar 11 15:17 boinc_task_state.xml
[2026-03-11 15:18:39] -rw------- 1 boinc boinc      1022 Mar 11 15:17 memory_monitor_summary.json
[2026-03-11 15:18:39] -rw------- 1 boinc boinc    272773 Mar 11 15:17 log.48838432._006450.job.log.tgz.1
[2026-03-11 15:18:39] -rw------- 1 boinc boinc      6314 Mar 11 15:17 heartbeat.json
[2026-03-11 15:18:39] -rw------- 1 boinc boinc        95 Mar 11 15:18 pilot_heartbeat.json
[2026-03-11 15:18:39] -rw-r--r-- 1 boinc boinc      8192 Mar 11 15:18 boinc_mmap_file
[2026-03-11 15:18:39] -rw-r--r-- 1 boinc boinc        27 Mar 11 15:18 wrapper_checkpoint.txt
[2026-03-11 15:18:39] -rw------- 1 boinc boinc      4822 Mar 11 15:18 pilotlog.txt
[2026-03-11 15:18:39] -rw------- 1 boinc boinc    738609 Mar 11 15:18 log.48838432._006450.job.log.1
[2026-03-11 15:18:39] -rw------- 1 boinc boinc       357 Mar 11 15:18 output.list
[2026-03-11 15:18:39] -rw-r--r-- 1 boinc boinc       620 Mar 11 15:18 runtime_log
[2026-03-11 15:18:39] -rw------- 1 boinc boinc   1024000 Mar 11 15:18 result.tar.gz
[2026-03-11 15:18:39] -rw-r--r-- 1 boinc boinc      8911 Mar 11 15:18 runtime_log.err
[2026-03-11 15:18:39] -rw------- 1 boinc boinc       660 Mar 11 15:18 1ewNDmCxJH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmDmBLDmvYkgWn.diag
[2026-03-11 15:18:39] -rw-r--r-- 1 boinc boinc      9323 Mar 11 15:18 stderr.txt
[2026-03-11 15:18:39] HITS file was successfully produced:
[2026-03-11 15:18:39] -rw------- 1 boinc boinc 228626371 Mar 11 15:17 shared/HITS.pool.root.1
[2026-03-11 15:18:39]  *** Contents of shared directory: ***
[2026-03-11 15:18:39] total 501552
[2026-03-11 15:18:39] -rw-r--r-- 2 boinc boinc 283314181 Mar 11 13:53 ATLAS.root_0
[2026-03-11 15:18:39] -rw-r--r-- 2 boinc boinc    597969 Mar 11 13:53 input.tar.gz
[2026-03-11 15:18:39] -rw-r--r-- 2 boinc boinc     15845 Mar 11 13:53 start_atlas.sh
[2026-03-11 15:18:39] -rw------- 1 boinc boinc 228626371 Mar 11 15:17 HITS.pool.root.1
[2026-03-11 15:18:39] -rw------- 1 boinc boinc   1024000 Mar 11 15:18 result.tar.gz
15:18:41 (3262567): run_atlas exited; CPU time 19175.704227
15:18:41 (3262567): called boinc_finish(0)

</stderr_txt>
]]>

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