Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:10:36 (2796248): wrapper (7.7.26015): starting
15:10:36 (2796248): wrapper: running run_atlas (--nthreads 8)
[2026-03-10 15:10:36] Arguments: --nthreads 8
[2026-03-10 15:10:36] Threads: 8
[2026-03-10 15:10:36] Checking for CVMFS
[2026-03-10 15:10:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-10 15:10:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-10 15:10:37] Running cvmfs_config stat atlas.cern.ch
[2026-03-10 15:10:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-10 15:10:38] 2.13.3.0 2091969 48867 353060 157127 3 317 22620245 32935936 41130 16776704 0 108886648 99.521 146256220 32407 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-10 15:10:38] CVMFS is ok
[2026-03-10 15:10:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 15:10:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 15:10:38] Further information can be found at the LHC@home message board.
[2026-03-10 15:10:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 15:10:38] Checking for apptainer binary...
[2026-03-10 15:10:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-10 15:10:38] Running /usr/bin/apptainer --version
[2026-03-10 15:10:38] apptainer version 1.4.5-2.el9
[2026-03-10 15:10:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 15:10:38] c6-12-27-2.aglt2.org
[2026-03-10 15:10:38] apptainer works
[2026-03-10 15:10:38] Set ATHENA_PROC_NUMBER=8
[2026-03-10 15:10:38] Set ATHENA_CORE_NUMBER=8
[2026-03-10 15:10:38] Starting ATLAS job with PandaID=7037133115
[2026-03-10 15:10:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 20:29:41]  *** The last 200 lines of the pilot log: ***
[2026-03-10 20:29:41] 2026-03-11 00:28:50,941 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 20:29:41] 2026-03-11 00:28:50,947 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 20:29:41] 2026-03-11 00:28:50,947 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 20:29:41] 2026-03-11 00:28:51,045 | INFO     | fitting pss+swap vs Time
[2026-03-10 20:29:41] 2026-03-11 00:28:51,045 | INFO     | sum of square deviations: 9327192509.13179
[2026-03-10 20:29:41] 2026-03-11 00:28:51,058 | INFO     | sum of deviations: -98572024722.73628
[2026-03-10 20:29:41] 2026-03-11 00:28:51,058 | INFO     | mean x: 1773179452.2186496
[2026-03-10 20:29:41] 2026-03-11 00:28:51,059 | INFO     | mean y: 2550049.4372990355
[2026-03-10 20:29:41] 2026-03-11 00:28:51,059 | INFO     | intersect: 18741939059.669533
[2026-03-10 20:29:41] 2026-03-11 00:28:51,059 | INFO     | chi2: 5.793945264431999
[2026-03-10 20:29:41] 2026-03-11 00:28:51,060 | INFO     | sum of square deviations: 8884535181.38896
[2026-03-10 20:29:41] 2026-03-11 00:28:51,073 | INFO     | sum of deviations: -33533485495.999977
[2026-03-10 20:29:41] 2026-03-11 00:28:51,073 | INFO     | mean x: 1773179299.7222223
[2026-03-10 20:29:41] 2026-03-11 00:28:51,074 | INFO     | mean y: 2572314.3529411764
[2026-03-10 20:29:41] 2026-03-11 00:28:51,074 | INFO     | intersect: 6695199572.287526
[2026-03-10 20:29:41] 2026-03-11 00:28:51,074 | INFO     | chi2: 3.4519019388518535
[2026-03-10 20:29:41] 2026-03-11 00:28:51,074 | INFO     | current chi2=3.4519019388518535 (change=40.422254934949656 %)
[2026-03-10 20:29:41] 2026-03-11 00:28:51,075 | INFO     | sum of square deviations: 8456091768.086375
[2026-03-10 20:29:41] 2026-03-11 00:28:51,087 | INFO     | sum of deviations: -32433419235.441875
[2026-03-10 20:29:41] 2026-03-11 00:28:51,087 | INFO     | mean x: 1773179147.2225914
[2026-03-10 20:29:41] 2026-03-11 00:28:51,087 | INFO     | mean y: 2572705.976744186
[2026-03-10 20:29:41] 2026-03-11 00:28:51,088 | INFO     | intersect: 6803617945.156814
[2026-03-10 20:29:41] 2026-03-11 00:28:51,088 | INFO     | chi2: 3.4508944048825505
[2026-03-10 20:29:41] 2026-03-11 00:28:51,088 | INFO     | current chi2=3.4508944048825505 (change=0.029187792328715302 %)
[2026-03-10 20:29:41] 2026-03-11 00:28:51,088 | INFO     | right removable region: 300
[2026-03-10 20:29:41] 2026-03-11 00:28:51,089 | INFO     | sum of square deviations: 8884493701.38896
[2026-03-10 20:29:41] 2026-03-11 00:28:51,101 | INFO     | sum of deviations: -181739447729.22223
[2026-03-10 20:29:41] 2026-03-11 00:28:51,101 | INFO     | mean x: 1773179604.7222223
[2026-03-10 20:29:41] 2026-03-11 00:28:51,102 | INFO     | mean y: 2578625.385620915
[2026-03-10 20:29:41] 2026-03-11 00:28:51,102 | INFO     | intersect: 36274390269.14391
[2026-03-10 20:29:41] 2026-03-11 00:28:51,102 | INFO     | chi2: 3.078153221965802
[2026-03-10 20:29:41] 2026-03-11 00:28:51,102 | INFO     | current chi2=3.078153221965802 (change=46.872932320192284 %)
[2026-03-10 20:29:41] 2026-03-11 00:28:51,103 | INFO     | sum of square deviations: 8456027718.63785
[2026-03-10 20:29:41] 2026-03-11 00:28:51,115 | INFO     | sum of deviations: -196624409168.83383
[2026-03-10 20:29:41] 2026-03-11 00:28:51,115 | INFO     | mean x: 1773179757.2259135
[2026-03-10 20:29:41] 2026-03-11 00:28:51,115 | INFO     | mean y: 2583904.8504983387
[2026-03-10 20:29:41] 2026-03-11 00:28:51,116 | INFO     | intersect: 41233577193.36875
[2026-03-10 20:29:41] 2026-03-11 00:28:51,116 | INFO     | chi2: 2.9184116929329456
[2026-03-10 20:29:41] 2026-03-11 00:28:51,116 | INFO     | current chi2=2.9184116929329456 (change=5.1895249363461105 %)
[2026-03-10 20:29:41] 2026-03-11 00:28:51,116 | INFO     | left removable region: 20
[2026-03-10 20:29:41] 2026-03-11 00:28:51,117 | INFO     | sum of square deviations: 6806824086.710708
[2026-03-10 20:29:41] 2026-03-11 00:28:51,167 | INFO     | sum of deviations: -108575912066.41078
[2026-03-10 20:29:41] 2026-03-11 00:28:51,167 | INFO     | mean x: 1773179726.7178571
[2026-03-10 20:29:41] 2026-03-11 00:28:51,167 | INFO     | mean y: 2600431.9821428573
[2026-03-10 20:29:41] 2026-03-11 00:28:51,167 | INFO     | intersect: 28286658258.881985
[2026-03-10 20:29:41] 2026-03-11 00:28:51,168 | INFO     | chi2: 0.44497440753654294
[2026-03-10 20:29:41] 2026-03-11 00:28:51,168 | INFO     | current memory leak: -15.95 B/s (using 280 data points, chi2=0.44)
[2026-03-10 20:29:41] 2026-03-11 00:28:51,184 | INFO     | could have reported an average CPU frequency of 2748 MHz (14 samples)
[2026-03-10 20:29:41] 2026-03-11 00:28:51,184 | INFO     | ..............................
[2026-03-10 20:29:41] 2026-03-11 00:28:51,184 | INFO     | . Timing measurements:
[2026-03-10 20:29:41] 2026-03-11 00:28:51,184 | INFO     | . get job = 0 s
[2026-03-10 20:29:41] 2026-03-11 00:28:51,184 | INFO     | . initial setup = 37 s
[2026-03-10 20:29:41] 2026-03-11 00:28:51,184 | INFO     | . payload setup = 47 s
[2026-03-10 20:29:41] 2026-03-11 00:28:51,184 | INFO     | . stage-in = 1 s
[2026-03-10 20:29:41] 2026-03-11 00:28:51,185 | INFO     | . payload execution = 18947 s
[2026-03-10 20:29:41] 2026-03-11 00:28:51,185 | INFO     | . stage-out = 8 s
[2026-03-10 20:29:41] 2026-03-11 00:28:51,185 | INFO     | . log creation = 1 s
[2026-03-10 20:29:41] 2026-03-11 00:28:51,185 | INFO     | ..............................
[2026-03-10 20:29:41] 2026-03-11 00:28:51,810 | INFO     | 
[2026-03-10 20:29:41] 2026-03-11 00:28:51,810 | INFO     | job summary report
[2026-03-10 20:29:41] 2026-03-11 00:28:51,810 | INFO     | --------------------------------------------------
[2026-03-10 20:29:41] 2026-03-11 00:28:51,810 | INFO     | PanDA job id: 7037133115
[2026-03-10 20:29:41] 2026-03-11 00:28:51,810 | INFO     | task id: 48936031
[2026-03-10 20:29:41] 2026-03-11 00:28:51,810 | INFO     | errors: (none)
[2026-03-10 20:29:41] 2026-03-11 00:28:51,810 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 20:29:41] 2026-03-11 00:28:51,810 | INFO     | pilot state: finished 
[2026-03-10 20:29:41] 2026-03-11 00:28:51,811 | INFO     | transexitcode: 0
[2026-03-10 20:29:41] 2026-03-11 00:28:51,811 | INFO     | exeerrorcode: 0
[2026-03-10 20:29:41] 2026-03-11 00:28:51,811 | INFO     | exeerrordiag: 
[2026-03-10 20:29:41] 2026-03-11 00:28:51,811 | INFO     | exitcode: 0
[2026-03-10 20:29:41] 2026-03-11 00:28:51,811 | INFO     | exitmsg: OK
[2026-03-10 20:29:41] 2026-03-11 00:28:51,811 | INFO     | cpuconsumptiontime: 41765 s
[2026-03-10 20:29:41] 2026-03-11 00:28:51,811 | INFO     | nevents: 400
[2026-03-10 20:29:41] 2026-03-11 00:28:51,811 | INFO     | neventsw: 0
[2026-03-10 20:29:41] 2026-03-11 00:28:51,811 | INFO     | pid: 2810586
[2026-03-10 20:29:41] 2026-03-11 00:28:51,811 | INFO     | pgrp: 2810586
[2026-03-10 20:29:41] 2026-03-11 00:28:51,811 | INFO     | corecount: 8
[2026-03-10 20:29:41] 2026-03-11 00:28:51,811 | INFO     | event service: False
[2026-03-10 20:29:41] 2026-03-11 00:28:51,811 | INFO     | sizes: {0: 2279724, 1: 2279808, 2: 2279808, 3: 2279808, 4: 2280269, 15: 2280269, 18999: 2312992, 19000: 2312991, 19010: 2322045, 19013: 2322101, 19016: 2322295}
[2026-03-10 20:29:41] 2026-03-11 00:28:51,812 | INFO     | --------------------------------------------------
[2026-03-10 20:29:41] 2026-03-11 00:28:51,812 | INFO     | 
[2026-03-10 20:29:41] 2026-03-11 00:28:51,812 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-10 20:29:41] 2026-03-11 00:28:51,890 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 20:29:41] 2026-03-11 00:28:51,890 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 20:29:41] 2026-03-11 00:28:51,890 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 20:29:41] 2026-03-11 00:28:51,890 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 20:29:41] 2026-03-11 00:28:51,890 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 20:29:41] 2026-03-11 00:28:51,890 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 20:29:41] 2026-03-11 00:28:51,890 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 20:29:41] 2026-03-11 00:28:51,891 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 20:29:41] 2026-03-11 00:28:51,891 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 20:29:41] 2026-03-11 00:28:51,891 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 20:29:41] 2026-03-11 00:28:51,891 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 20:29:41] 2026-03-11 00:28:51,891 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 20:29:41] 2026-03-11 00:28:51,891 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 20:29:41] 2026-03-11 00:28:51,891 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 20:29:41] 2026-03-11 00:28:51,891 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 20:29:41] 2026-03-11 00:28:51,891 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 20:29:41] 2026-03-11 00:28:51,891 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 20:29:41] 2026-03-11 00:28:51,891 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 20:29:41] 2026-03-11 00:28:51,964 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 20:29:41] 2026-03-11 00:28:51,964 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 20:29:41] 2026-03-11 00:28:51,964 | INFO     | job 7037133115 has completed (purged errors)
[2026-03-10 20:29:41] 2026-03-11 00:28:51,964 | INFO     | overall cleanup function is called
[2026-03-10 20:29:41] 2026-03-11 00:28:51,958 | INFO     | number of running child processes to parent process 2810586: 1
[2026-03-10 20:29:41] 2026-03-11 00:28:51,991 | INFO     | maximum number of monitored processes: 6
[2026-03-10 20:29:41] 2026-03-11 00:28:51,991 | INFO     | aborting job monitoring since job object (job id=7037133115) has expired
[2026-03-10 20:29:41] 2026-03-11 00:28:52,975 | INFO     | --- collectZombieJob: --- 10, [2810586]
[2026-03-10 20:29:41] 2026-03-11 00:28:52,975 | INFO     | zombie collector waiting for pid 2810586
[2026-03-10 20:29:41] 2026-03-11 00:28:52,975 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 20:29:41] 2026-03-11 00:28:52,975 | INFO     | collected zombie processes
[2026-03-10 20:29:41] 2026-03-11 00:28:52,975 | INFO     | will attempt to kill all subprocesses of pid=2810586
[2026-03-10 20:29:41] 2026-03-11 00:28:57,002 | INFO     | PID=2804054 has CPU usage=12.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-10 20:29:41] 2026-03-11 00:28:57,003 | INFO     | .. there are 51 such processes running
[2026-03-10 20:29:41] 2026-03-11 00:28:57,827 | INFO     | process IDs to be killed: [2810586] (in reverse order)
[2026-03-10 20:29:41] 2026-03-11 00:28:58,089 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 20:29:41] 2026-03-11 00:28:58,089 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 20:29:41] 2026-03-11 00:28:58,243 | INFO     | did not find any defunct processes belonging to 2810586
[2026-03-10 20:29:41] 2026-03-11 00:28:58,390 | INFO     | did not find any defunct processes belonging to 2810586
[2026-03-10 20:29:41] 2026-03-11 00:28:58,390 | INFO     | ready for new job
[2026-03-10 20:29:41] 2026-03-11 00:28:58,390 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 20:29:41] 2026-03-11 00:28:58,412 | INFO     | **************************************
[2026-03-10 20:29:41] 2026-03-11 00:28:58,413 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 20:29:41] 2026-03-11 00:28:58,413 | INFO     | **************************************
[2026-03-10 20:29:41] 2026-03-11 00:28:58,413 | INFO     | 
[2026-03-10 20:29:41] 2026-03-11 00:28:58,439 | INFO     | architecture information:
[2026-03-10 20:29:41] 2026-03-11 00:28:58,465 | INFO     | executing command: cat /etc/os-release
[2026-03-10 20:29:41] 2026-03-11 00:28:58,756 | INFO     | cat /etc/os-release:
[2026-03-10 20:29:41] NAME="CentOS Linux"
[2026-03-10 20:29:41] VERSION="7 (Core)"
[2026-03-10 20:29:41] ID="centos"
[2026-03-10 20:29:41] ID_LIKE="rhel fedora"
[2026-03-10 20:29:41] VERSION_ID="7"
[2026-03-10 20:29:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 20:29:41] ANSI_COLOR="0;31"
[2026-03-10 20:29:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 20:29:41] HOME_URL="https://www.centos.org/"
[2026-03-10 20:29:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 20:29:41] 
[2026-03-10 20:29:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 20:29:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 20:29:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 20:29:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 20:29:41] 
[2026-03-10 20:29:41] 2026-03-11 00:28:58,756 | INFO     | **************************************
[2026-03-10 20:29:41] 2026-03-11 00:28:59,261 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-10 20:29:41] 2026-03-11 00:28:59,328 | INFO     | sufficient remaining disk space (93549756416 B)
[2026-03-10 20:29:41] 2026-03-11 00:28:59,328 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 20:29:41] 2026-03-11 00:28:59,329 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 20:29:41] 2026-03-11 00:28:59,329 | INFO     | update_server=False
[2026-03-10 20:29:41] 2026-03-11 00:28:59,329 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 20:29:41] 2026-03-11 00:28:59,447 | INFO     | all data control threads have been joined
[2026-03-10 20:29:41] 2026-03-11 00:28:59,604 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 20:29:41] 2026-03-11 00:28:59,631 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 20:29:41] 2026-03-11 00:28:59,631 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-10 20:29:41] 2026-03-11 00:28:59,631 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-10 20:29:41] 2026-03-11 00:28:59,631 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 20:29:41] 2026-03-11 00:28:59,631 | INFO     | will abort loop
[2026-03-10 20:29:41] 2026-03-11 00:29:00,335 | INFO     | [job] retrieve thread has finished
[2026-03-10 20:29:41] 2026-03-11 00:29:00,398 | INFO     | all job control threads have been joined
[2026-03-10 20:29:41] 2026-03-11 00:29:00,403 | INFO     | all payload control threads have been joined
[2026-03-10 20:29:41] 2026-03-11 00:29:00,453 | INFO     | [data] control thread has finished
[2026-03-10 20:29:41] 2026-03-11 00:29:00,637 | INFO     | [job] job monitor thread has finished
[2026-03-10 20:29:41] 2026-03-11 00:29:00,850 | INFO     | [payload] validate_post thread has finished
[2026-03-10 20:29:41] 2026-03-11 00:29:00,880 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 20:29:41] 2026-03-11 00:29:01,100 | INFO     | [job] validate thread has finished
[2026-03-10 20:29:41] 2026-03-11 00:29:01,100 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 20:29:41] 2026-03-11 00:29:01,103 | INFO     | [payload] failed_post thread has finished
[2026-03-10 20:29:41] 2026-03-11 00:29:01,126 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 20:29:41] 2026-03-11 00:29:01,246 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 20:29:41] 2026-03-11 00:29:01,404 | INFO     | [job] control thread has finished
[2026-03-10 20:29:41] 2026-03-11 00:29:01,409 | INFO     | [payload] control thread has finished
[2026-03-10 20:29:41] 2026-03-11 00:29:01,493 | INFO     | [data] copytool_in thread has finished
[2026-03-10 20:29:41] 2026-03-11 00:29:01,611 | INFO     | [data] copytool_out thread has finished
[2026-03-10 20:29:41] 2026-03-11 00:29:01,650 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 20:29:41] 2026-03-11 00:29:01,886 | INFO     | [job] queue monitor thread has finished
[2026-03-10 20:29:41] 2026-03-11 00:29:03,640 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 20:29:41] 2026-03-11 00:29:14,032 | INFO     | [monitor] cgroup control has ended
[2026-03-10 20:29:41] 2026-03-11 00:29:16,141 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140171429312320)>', '<ExcThread(monitor, started 140170451990272)>']
[2026-03-10 20:29:41] 2026-03-11 00:29:21,167 | INFO     | all workflow threads have been joined
[2026-03-10 20:29:41] 2026-03-11 00:29:21,169 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 20:29:41] 2026-03-11 00:29:21,169 | INFO     | traces error code: 0
[2026-03-10 20:29:41] 2026-03-11 00:29:21,169 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 20:29:41] 2026-03-11 00:29:37,257 | INFO     | PID=2804054 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 20:29:41] 2026-03-11 00:29:37,258 | INFO     | .. there are 51 such processes running
[2026-03-10 20:29:41] 2026-03-11 00:29:37,258 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 20:29:41] 2026-03-11 00:29:37,258 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 20:29:41] 2026-03-11 00:29:37,258 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 20:29:41] 2026-03-11 00:29:37,258 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 20:29:41] 2026-03-11 00:29:37,258 | INFO     | [monitor] control thread has ended
[2026-03-10 20:29:41] 2026-03-11 00:29:39,733 [wrapper] ==== pilot stdout END ====
[2026-03-10 20:29:41] 2026-03-11 00:29:39,771 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 20:29:41] 2026-03-11 00:29:39,847 [wrapper] pilotpid: 2804054
[2026-03-10 20:29:41] 2026-03-11 00:29:39,865 [wrapper] Pilot exit status: 0
[2026-03-10 20:29:41] 2026-03-11 00:29:39,985 [wrapper] pandaids: 7037133115
[2026-03-10 20:29:41] 2026-03-11 00:29:41,131 [wrapper] cleanup supervisor_pilot 4116357 2804055
[2026-03-10 20:29:41] 2026-03-11 00:29:41,146 [wrapper] Test setup, not cleaning
[2026-03-10 20:29:41] 2026-03-11 00:29:41,166 [wrapper] apfmon messages muted
[2026-03-10 20:29:41] 2026-03-11 00:29:41,188 [wrapper] ==== wrapper stdout END ====
[2026-03-10 20:29:41] 2026-03-11 00:29:41,209 [wrapper] ==== wrapper stderr END ====
[2026-03-10 20:29:41]  *** Error codes and diagnostics ***
[2026-03-10 20:29:41]     "exeErrorCode": 0,
[2026-03-10 20:29:41]     "exeErrorDiag": "",
[2026-03-10 20:29:41]     "pilotErrorCode": 0,
[2026-03-10 20:29:41]     "pilotErrorDiag": "",
[2026-03-10 20:29:41]  *** Listing of results directory ***
[2026-03-10 20:29:41] total 445172
[2026-03-10 20:29:41] -rw-r--r--. 1 boincer umatlas    584627 Mar  2 09:48 pilot3.tar.gz
[2026-03-10 20:29:41] -rwx------. 1 boincer umatlas     36322 Mar  2 09:51 runpilot2-wrapper.sh
[2026-03-10 20:29:41] -rw-r--r--. 1 boincer umatlas      5111 Mar  2 09:52 queuedata.json
[2026-03-10 20:29:41] -rw-r--r--. 1 boincer umatlas       100 Mar 10 15:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 20:29:41] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 10 15:10 run_atlas
[2026-03-10 20:29:41] -rw-r--r--. 1 boincer umatlas       105 Mar 10 15:10 job.xml
[2026-03-10 20:29:41] -rw-r--r--. 2 boincer umatlas 262148208 Mar 10 15:10 EVNT.48564574._000002.pool.root.1
[2026-03-10 20:29:41] -rw-r--r--. 2 boincer umatlas     15845 Mar 10 15:10 start_atlas.sh
[2026-03-10 20:29:41] drwxrwx--x. 2 boincer umatlas      4096 Mar 10 15:10 shared
[2026-03-10 20:29:41] -rw-r--r--. 2 boincer umatlas    597945 Mar 10 15:10 input.tar.gz
[2026-03-10 20:29:41] -rw-r--r--. 1 boincer umatlas         0 Mar 10 15:10 boinc_lockfile
[2026-03-10 20:29:41] -rw-r--r--. 1 boincer umatlas      2560 Mar 10 15:10 pandaJob.out
[2026-03-10 20:29:41] -rw-------. 1 boincer umatlas        57 Mar 10 15:10 setup.sh.local
[2026-03-10 20:29:41] -rw-------. 1 boincer umatlas   1006644 Mar 10 15:11 agis_schedconf.cvmfs.json
[2026-03-10 20:29:41] -rw-------. 1 boincer umatlas       443 Mar 10 15:11 workernode_map.json
[2026-03-10 20:29:41] drwx------. 5 boincer umatlas      4096 Mar 10 15:11 pilot3
[2026-03-10 20:29:41] -rw-------. 1 boincer umatlas 184435331 Mar 10 20:25 HITS.48936031._000032.pool.root.1
[2026-03-10 20:29:41] -rw-r--r--. 1 boincer umatlas       530 Mar 10 20:25 boinc_task_state.xml
[2026-03-10 20:29:41] -rw-r--r--. 1 boincer umatlas      6880 Mar 10 20:28 init_data.xml
[2026-03-10 20:29:41] -rw-------. 1 boincer umatlas      1044 Mar 10 20:28 memory_monitor_summary.json
[2026-03-10 20:29:41] -rw-------. 1 boincer umatlas   1511578 Mar 10 20:28 agis_ddmendpoints.agis.ALL.json
[2026-03-10 20:29:41] -rw-------. 1 boincer umatlas    489385 Mar 10 20:28 log.48936031._000032.job.log.tgz.1
[2026-03-10 20:29:41] -rw-------. 1 boincer umatlas      6391 Mar 10 20:28 heartbeat.json
[2026-03-10 20:29:41] -rw-------. 1 boincer umatlas        95 Mar 10 20:28 pilot_heartbeat.json
[2026-03-10 20:29:41] -rw-------. 1 boincer umatlas       823 Mar 10 20:29 pilotlog.txt
[2026-03-10 20:29:41] -rw-r--r--. 1 boincer umatlas      8192 Mar 10 20:29 boinc_mmap_file
[2026-03-10 20:29:41] -rw-r--r--. 1 boincer umatlas        28 Mar 10 20:29 wrapper_checkpoint.txt
[2026-03-10 20:29:41] -rw-------. 1 boincer umatlas   2180991 Mar 10 20:29 log.48936031._000032.job.log.1
[2026-03-10 20:29:41] -rw-------. 1 boincer umatlas       357 Mar 10 20:29 output.list
[2026-03-10 20:29:41] -rw-r--r--. 1 boincer umatlas       620 Mar 10 20:29 runtime_log
[2026-03-10 20:29:41] -rw-------. 1 boincer umatlas   2682880 Mar 10 20:29 result.tar.gz
[2026-03-10 20:29:41] -rw-r--r--. 1 boincer umatlas      9352 Mar 10 20:29 runtime_log.err
[2026-03-10 20:29:41] -rw-------. 1 boincer umatlas       658 Mar 10 20:29 HFsMDmYnJH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmpkDLDm5zlULo.diag
[2026-03-10 20:29:41] -rw-r--r--. 1 boincer umatlas     21292 Mar 10 20:29 stderr.txt
[2026-03-10 20:29:41] HITS file was successfully produced:
[2026-03-10 20:29:41] -rw-------. 1 boincer umatlas 184435331 Mar 10 20:25 shared/HITS.pool.root.1
[2026-03-10 20:29:41]  *** Contents of shared directory: ***
[2026-03-10 20:29:41] total 439348
[2026-03-10 20:29:41] -rw-r--r--. 2 boincer umatlas 262148208 Mar 10 15:10 ATLAS.root_0
[2026-03-10 20:29:41] -rw-r--r--. 2 boincer umatlas     15845 Mar 10 15:10 start_atlas.sh
[2026-03-10 20:29:41] -rw-r--r--. 2 boincer umatlas    597945 Mar 10 15:10 input.tar.gz
[2026-03-10 20:29:41] -rw-------. 1 boincer umatlas 184435331 Mar 10 20:25 HITS.pool.root.1
[2026-03-10 20:29:41] -rw-------. 1 boincer umatlas   2682880 Mar 10 20:29 result.tar.gz
20:30:03 (2796248): run_atlas exited; CPU time 42802.221688
20:30:03 (2796248): called boinc_finish(0)

</stderr_txt>
]]>

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