Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:47:54 (862923): wrapper (7.7.26015): starting
11:47:54 (862923): wrapper: running run_atlas (--nthreads 12)
[2026-03-10 11:47:54] Arguments: --nthreads 12
[2026-03-10 11:47:54] Threads: 12
[2026-03-10 11:47:54] Checking for CVMFS
[2026-03-10 11:47:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-10 11:47:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-10 11:47:54] Running cvmfs_config stat atlas.cern.ch
[2026-03-10 11:47:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-10 11:47:55] 2.11.5.0 2451234 178225 239784 157126 3 405 37022402 45568001 20882 130560 0 1621911763 99.815 900386189 21703 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2026-03-10 11:47:55] CVMFS is ok
[2026-03-10 11:47:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 11:47:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 11:47:55] Further information can be found at the LHC@home message board.
[2026-03-10 11:47:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 11:47:55] Checking for apptainer binary...
[2026-03-10 11:47:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-10 11:47:55] Running /usr/bin/apptainer --version
[2026-03-10 11:47:55] apptainer version 1.4.1-1.el9
[2026-03-10 11:47:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 11:47:56] wns0065.triumf.lcg
[2026-03-10 11:47:56] apptainer works
[2026-03-10 11:47:56] Set ATHENA_PROC_NUMBER=12
[2026-03-10 11:47:56] Set ATHENA_CORE_NUMBER=12
[2026-03-10 11:47:56] Starting ATLAS job with PandaID=7048838382
[2026-03-10 11:47:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 11:52:24]  *** The last 200 lines of the pilot log: ***
[2026-03-10 11:52:24] 2026-03-10 18:51:20,776 | WARNING  | wrong length of table data, x=[1773168535.0], y=[1002.0] (must be same and length>=4)
[2026-03-10 11:52:24] 2026-03-10 18:51:20,777 | INFO     | could have reported an average CPU frequency of 2690 MHz (4 samples)
[2026-03-10 11:52:24] 2026-03-10 18:51:20,777 | INFO     | ..............................
[2026-03-10 11:52:24] 2026-03-10 18:51:20,777 | INFO     | . Timing measurements:
[2026-03-10 11:52:24] 2026-03-10 18:51:20,777 | INFO     | . get job = 0 s
[2026-03-10 11:52:24] 2026-03-10 18:51:20,777 | INFO     | . initial setup = 9 s
[2026-03-10 11:52:24] 2026-03-10 18:51:20,777 | INFO     | . payload setup = 14 s
[2026-03-10 11:52:24] 2026-03-10 18:51:20,777 | INFO     | . stage-in = 0 s
[2026-03-10 11:52:24] 2026-03-10 18:51:20,777 | INFO     | . payload execution = 32 s
[2026-03-10 11:52:24] 2026-03-10 18:51:20,777 | INFO     | . stage-out = 0 s
[2026-03-10 11:52:24] 2026-03-10 18:51:20,777 | INFO     | . log creation = 0 s
[2026-03-10 11:52:24] 2026-03-10 18:51:20,777 | INFO     | ..............................
[2026-03-10 11:52:24] 2026-03-10 18:51:20,777 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-10 11:52:24] 2026-03-10 18:51:20,777 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7048838382/pilotlog.txt
[2026-03-10 11:52:24] 2026-03-10 18:51:20,808 | INFO     | time since job start (183s) is within the limit (349056.0s)
[2026-03-10 11:52:24] 2026-03-10 18:51:20,844 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-10 11:52:24] - Log from pilotlog.txt -
[2026-03-10 11:52:24] 2026-03-10 18:51:20,776 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 11:52:24] 2026-03-10 18:51:20,776 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 11:52:24] 2026-03-10 18:51:20,776 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 11:52:24] 2026-03-10 18:51:20,776 | WARNING  | found no stored workdir sizes
[2026-03-10 11:52:24] 2026-03-10 18:51:20,776 | INFO     | will not add max space = 0 B to job metrics
[2026-03-10 11:52:24] 2026-03-10 18:51:20,776 | WARNING  | wrong length of table data, x=[1773168535.0], y=[1002.0] (must be same and length>=4)
[2026-03-10 11:52:24] 2026-03-10 18:51:20,777 | INFO     | could have reported an average CPU frequency of 2690 MHz (4 samples)
[2026-03-10 11:52:24] 2026-03-10 18:51:20,777 | INFO     | ..............................
[2026-03-10 11:52:24] 2026-03-10 18:51:20,777 | INFO     | . Timing measurements:
[2026-03-10 11:52:24] 2026-03-10 18:51:20,777 | INFO     | . get job = 0 s
[2026-03-10 11:52:24] 2026-03-10 18:51:20,777 | INFO     | . initial setup = 9 s
[2026-03-10 11:52:24] 2026-03-10 18:51:20,777 | INFO     | . payload setup = 14 s
[2026-03-10 11:52:24] 2026-03-10 18:51:20,777 | INFO     | . stage-in = 0 s
[2026-03-10 11:52:24] 2026-03-10 18:51:20,777 | INFO     | . payload execution = 32 s
[2026-03-10 11:52:24] 2026-03-10 18:51:20,777 | INFO     | . stage-out = 0 s
[2026-03-10 11:52:24] 2026-03-10 18:51:20,777 | INFO     | . log creation = 0 s
[2026-03-10 11:52:24] 2026-03-10 18:51:20,777 | INFO     | ..............................
[2026-03-10 11:52:24] 2026-03-10 18:51:20,777 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-10 11:52:24] 2026-03-10 18:51:20,777 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7048838382/pilotlog.txt
[2026-03-10 11:52:24] 2026-03-10 18:51:20,808 | INFO     | time since job start (183s) is within the limit (349056.0s)
[2026-03-10 11:52:24] 2026-03-10 18:51:20,844 | WARNING  | 
[2026-03-10 11:52:24] [begin log extracts]
[2026-03-10 11:52:24] - Log from pilotlog.txt -
[2026-03-10 11:52:24] 2026-03-10 18:51:20,776 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 11:52:24] 2026-03-10 18:51:20,776 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 11:52:24] 2026-03-10 18:51:20,776 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 11:52:24] 2026-03-10 18:51:20,776 | WARNING  | found no stored workdir sizes
[2026-03-10 11:52:24] 2026-03-10 18:51:20,776 | INFO     | will not add max space = 0 B to job metrics
[2026-03-10 11:52:24] 2026-03-10 18:51:20,776 | WARNING  | wrong length of table data, x=[1773168535.0], y=[1002.0] (must be same and length>=4)
[2026-03-10 11:52:24] 2026-03-10 18:51:20,777 | INFO     | could have reported an average CPU frequency of 2690 MHz (4 samples)
[2026-03-10 11:52:24] 2026-03-10 18:51:20,777 | INFO     | ..............................
[2026-03-10 11:52:24] 2026-03-10 18:51:20,777 | INFO     | . Timing measurements:
[2026-03-10 11:52:24] 2026-03-10 18:51:20,777 | INFO     | . get job = 0 s
[2026-03-10 11:52:24] 2026-03-10 18:51:20,777 | INFO     | . initial setup = 9 s
[2026-03-10 11:52:24] 2026-03-10 18:51:20,777 | INFO     | . payload setup = 14 s
[2026-03-10 11:52:24] 2026-03-10 18:51:20,777 | INFO     | . stage-in = 0 s
[2026-03-10 11:52:24] 2026-03-10 18:51:20,777 | INFO     | . payload execution = 32 s
[2026-03-10 11:52:24] 2026-03-10 18:51:20,777 | INFO     | . stage-out = 0 s
[2026-03-10 11:52:24] 2026-03-10 18:51:20,777 | INFO     | . log creation = 0 s
[2026-03-10 11:52:24] 2026-03-10 18:51:20,777 | INFO     | ..............................
[2026-03-10 11:52:24] 2026-03-10 18:51:20,777 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-10 11:52:24] 2026-03-10 18:51:20,777 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7048838382/pilotlog.txt
[2026-03-10 11:52:24] 2026-03-10 18:51:20,808 | INFO     | time since job start (183s) is within the limit (349056.0s)
[2026-03-10 11:52:24] [end log extracts]
[2026-03-10 11:52:24] 2026-03-10 18:51:20,844 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-10 11:52:24] 2026-03-10 18:51:20,845 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-10 11:52:24] 2026-03-10 18:51:21,000 | INFO     | 
[2026-03-10 11:52:24] 2026-03-10 18:51:21,000 | INFO     | job summary report
[2026-03-10 11:52:24] 2026-03-10 18:51:21,000 | INFO     | --------------------------------------------------
[2026-03-10 11:52:24] 2026-03-10 18:51:21,000 | INFO     | PanDA job id: 7048838382
[2026-03-10 11:52:24] 2026-03-10 18:51:21,000 | INFO     | task id: 48958554
[2026-03-10 11:52:24] 2026-03-10 18:51:21,000 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-10 11:49:11,163 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-10 11:52:24] 2026-03-10 18:51:21,000 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 11:52:24] 2026-03-10 18:51:21,000 | INFO     | pilot state: failed 
[2026-03-10 11:52:24] 2026-03-10 18:51:21,000 | INFO     | transexitcode: 65
[2026-03-10 11:52:24] 2026-03-10 18:51:21,000 | INFO     | exeerrorcode: 65
[2026-03-10 11:52:24] 2026-03-10 18:51:21,000 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-10 11:52:24] 2026-03-10 18:51:21,000 | INFO     | exitcode: 65
[2026-03-10 11:52:24] 2026-03-10 18:51:21,000 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-10 11:52:24] 2026-03-10 18:51:21,000 | INFO     | cpuconsumptiontime: 13 s
[2026-03-10 11:52:24] 2026-03-10 18:51:21,000 | INFO     | nevents: 0
[2026-03-10 11:52:24] 2026-03-10 18:51:21,000 | INFO     | neventsw: 0
[2026-03-10 11:52:24] 2026-03-10 18:51:21,000 | INFO     | pid: 871189
[2026-03-10 11:52:24] 2026-03-10 18:51:21,001 | INFO     | pgrp: 871189
[2026-03-10 11:52:24] 2026-03-10 18:51:21,001 | INFO     | corecount: 12
[2026-03-10 11:52:24] 2026-03-10 18:51:21,001 | INFO     | event service: False
[2026-03-10 11:52:24] 2026-03-10 18:51:21,001 | INFO     | sizes: {0: 2280166, 11: 2280166, 51: 2303331, 52: 2307623, 54: 2307651, 172: 2307817}
[2026-03-10 11:52:24] 2026-03-10 18:51:21,001 | INFO     | --------------------------------------------------
[2026-03-10 11:52:24] 2026-03-10 18:51:21,001 | INFO     | 
[2026-03-10 11:52:24] 2026-03-10 18:51:21,001 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-10 11:52:24] 2026-03-10 18:51:21,018 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 11:52:24] 2026-03-10 18:51:21,018 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 11:52:24] 2026-03-10 18:51:21,018 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 11:52:24] 2026-03-10 18:51:21,018 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 11:52:24] 2026-03-10 18:51:21,018 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 11:52:24] 2026-03-10 18:51:21,018 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 11:52:24] 2026-03-10 18:51:21,018 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 11:52:24] 2026-03-10 18:51:21,018 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 11:52:24] 2026-03-10 18:51:21,019 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 11:52:24] 2026-03-10 18:51:21,019 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 11:52:24] 2026-03-10 18:51:21,019 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 11:52:24] 2026-03-10 18:51:21,019 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 11:52:24] 2026-03-10 18:51:21,019 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 11:52:24] 2026-03-10 18:51:21,019 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 11:52:24] 2026-03-10 18:51:21,019 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 11:52:24] 2026-03-10 18:51:21,019 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 11:52:24] 2026-03-10 18:51:21,019 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 11:52:24] 2026-03-10 18:51:21,019 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 11:52:24] 2026-03-10 18:51:21,019 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 11:52:24] 2026-03-10 18:51:21,019 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 11:52:24] 2026-03-10 18:51:21,019 | INFO     | job 7048838382 has completed (purged errors)
[2026-03-10 11:52:24] 2026-03-10 18:51:21,019 | INFO     | overall cleanup function is called
[2026-03-10 11:52:24] 2026-03-10 18:51:22,029 | INFO     | --- collectZombieJob: --- 10, [871189]
[2026-03-10 11:52:24] 2026-03-10 18:51:22,029 | INFO     | zombie collector waiting for pid 871189
[2026-03-10 11:52:24] 2026-03-10 18:51:22,029 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 11:52:24] 2026-03-10 18:51:22,029 | INFO     | collected zombie processes
[2026-03-10 11:52:24] 2026-03-10 18:51:22,030 | INFO     | will attempt to kill all subprocesses of pid=871189
[2026-03-10 11:52:24] 2026-03-10 18:51:22,467 | INFO     | process IDs to be killed: [871189] (in reverse order)
[2026-03-10 11:52:24] 2026-03-10 18:51:22,821 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 11:52:24] 2026-03-10 18:51:22,821 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 11:52:24] 2026-03-10 18:51:22,867 | INFO     | did not find any defunct processes belonging to 871189
[2026-03-10 11:52:24] 2026-03-10 18:51:22,911 | INFO     | did not find any defunct processes belonging to 871189
[2026-03-10 11:52:24] 2026-03-10 18:51:22,911 | INFO     | ready for new job
[2026-03-10 11:52:24] 2026-03-10 18:51:22,911 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 11:52:24] 2026-03-10 18:51:22,913 | INFO     | **************************************
[2026-03-10 11:52:24] 2026-03-10 18:51:22,913 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 11:52:24] 2026-03-10 18:51:22,913 | INFO     | **************************************
[2026-03-10 11:52:24] 2026-03-10 18:51:22,913 | INFO     | 
[2026-03-10 11:52:24] 2026-03-10 18:51:22,936 | INFO     | architecture information:
[2026-03-10 11:52:24] 2026-03-10 18:51:22,940 | INFO     | executing command: cat /etc/os-release
[2026-03-10 11:52:24] 2026-03-10 18:51:22,971 | INFO     | cat /etc/os-release:
[2026-03-10 11:52:24] NAME="CentOS Linux"
[2026-03-10 11:52:24] VERSION="7 (Core)"
[2026-03-10 11:52:24] ID="centos"
[2026-03-10 11:52:24] ID_LIKE="rhel fedora"
[2026-03-10 11:52:24] VERSION_ID="7"
[2026-03-10 11:52:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 11:52:24] ANSI_COLOR="0;31"
[2026-03-10 11:52:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 11:52:24] HOME_URL="https://www.centos.org/"
[2026-03-10 11:52:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 11:52:24] 
[2026-03-10 11:52:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 11:52:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 11:52:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 11:52:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 11:52:24] 
[2026-03-10 11:52:24] 2026-03-10 18:51:22,971 | INFO     | **************************************
[2026-03-10 11:52:24] 2026-03-10 18:51:23,475 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-10 11:52:24] 2026-03-10 18:51:23,560 | INFO     | sufficient remaining disk space (1879419387904 B)
[2026-03-10 11:52:24] 2026-03-10 18:51:23,560 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 11:52:24] 2026-03-10 18:51:23,560 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 11:52:24] 2026-03-10 18:51:23,560 | INFO     | update_server=False
[2026-03-10 11:52:24] 2026-03-10 18:51:23,560 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 11:52:24] 2026-03-10 18:51:23,651 | INFO     | all job control threads have been joined
[2026-03-10 11:52:24] 2026-03-10 18:51:23,925 | INFO     | all data control threads have been joined
[2026-03-10 11:52:24] 2026-03-10 18:51:24,000 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-10 11:52:24] 2026-03-10 18:51:24,000 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-10 11:52:24] 2026-03-10 18:51:24,000 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 11:52:24] 2026-03-10 18:51:24,000 | INFO     | will abort loop
[2026-03-10 11:52:24] 2026-03-10 18:51:24,566 | INFO     | [job] retrieve thread has finished
[2026-03-10 11:52:24] 2026-03-10 18:51:24,603 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 11:52:24] 2026-03-10 18:51:24,657 | INFO     | [job] control thread has finished
[2026-03-10 11:52:24] 2026-03-10 18:51:24,664 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 11:52:24] 2026-03-10 18:51:24,699 | INFO     | [data] copytool_in thread has finished
[2026-03-10 11:52:24] 2026-03-10 18:51:24,763 | INFO     | all payload control threads have been joined
[2026-03-10 11:52:24] 2026-03-10 18:51:24,931 | INFO     | [data] control thread has finished
[2026-03-10 11:52:24] 2026-03-10 18:51:24,955 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 11:52:24] 2026-03-10 18:51:25,006 | INFO     | [job] job monitor thread has finished
[2026-03-10 11:52:24] 2026-03-10 18:51:25,231 | INFO     | [payload] failed_post thread has finished
[2026-03-10 11:52:24] 2026-03-10 18:51:25,769 | INFO     | [payload] control thread has finished
[2026-03-10 11:52:24] 2026-03-10 18:51:25,796 | INFO     | [job] validate thread has finished
[2026-03-10 11:52:24] 2026-03-10 18:51:25,830 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 11:52:24] 2026-03-10 18:51:25,909 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 11:52:24] 2026-03-10 18:51:26,028 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 11:52:24] 2026-03-10 18:51:26,157 | INFO     | [payload] validate_post thread has finished
[2026-03-10 11:52:24] 2026-03-10 18:51:26,245 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 11:52:24] 2026-03-10 18:51:26,962 | INFO     | [data] copytool_out thread has finished
[2026-03-10 11:52:24] 2026-03-10 18:51:27,034 | INFO     | [job] queue monitor thread has finished
[2026-03-10 11:52:24] 2026-03-10 18:51:30,254 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 11:52:24] 2026-03-10 18:51:54,159 | INFO     | PID=866581 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-10 11:52:24] 2026-03-10 18:51:54,159 | INFO     | .. there are 28 such processes running
[2026-03-10 11:52:24] 2026-03-10 18:51:54,160 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 11:52:24] 2026-03-10 18:51:54,160 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 11:52:24] 2026-03-10 18:51:54,160 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 11:52:24] 2026-03-10 18:52:17,241 | INFO     | [monitor] cgroup control has ended
[2026-03-10 11:52:24] 2026-03-10 18:52:18,605 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139826248718144)>', '<ExcThread(monitor, started 139825176884992)>']
[2026-03-10 11:52:24] 2026-03-10 18:52:19,350 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 11:52:24] 2026-03-10 18:52:19,350 | INFO     | [monitor] control thread has ended
[2026-03-10 11:52:24] 2026-03-10 18:52:23,632 | INFO     | all workflow threads have been joined
[2026-03-10 11:52:24] 2026-03-10 18:52:23,632 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 11:52:24] 2026-03-10 18:52:23,632 | INFO     | traces error code: 0
[2026-03-10 11:52:24] 2026-03-10 18:52:23,632 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 11:52:24] 2026-03-10 18:52:23,934 [wrapper] ==== pilot stdout END ====
[2026-03-10 11:52:24] 2026-03-10 18:52:23,956 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 11:52:24] 2026-03-10 18:52:23,979 [wrapper] pilotpid: 866581
[2026-03-10 11:52:24] 2026-03-10 18:52:23,981 [wrapper] Pilot exit status: 0
[2026-03-10 11:52:24] 2026-03-10 18:52:24,029 [wrapper] pandaids: 7048838382
[2026-03-10 11:52:24] 2026-03-10 18:52:24,302 [wrapper] cleanup supervisor_pilot  866587 866582
[2026-03-10 11:52:24] 2026-03-10 18:52:24,321 [wrapper] Test setup, not cleaning
[2026-03-10 11:52:24] 2026-03-10 18:52:24,323 [wrapper] apfmon messages muted
[2026-03-10 11:52:24] 2026-03-10 18:52:24,334 [wrapper] ==== wrapper stdout END ====
[2026-03-10 11:52:24] 2026-03-10 18:52:24,362 [wrapper] ==== wrapper stderr END ====
[2026-03-10 11:52:24]  *** Error codes and diagnostics ***
[2026-03-10 11:52:24]     "exeErrorCode": 65,
[2026-03-10 11:52:24]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-10 11:52:24]     "pilotErrorCode": 1305,
[2026-03-10 11:52:24]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-10 11:52:24]  *** Listing of results directory ***
[2026-03-10 11:52:24] total 273152
[2026-03-10 11:52:24] -rw-r--r--. 1 boinc boinc    584627 Mar 10 07:07 pilot3.tar.gz
[2026-03-10 11:52:24] -rwx------. 1 boinc boinc     36322 Mar 10 07:08 runpilot2-wrapper.sh
[2026-03-10 11:52:24] -rw-r--r--. 1 boinc boinc      5111 Mar 10 07:09 queuedata.json
[2026-03-10 11:52:24] -rw-r--r--. 1 boinc boinc       100 Mar 10 11:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 11:52:24] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 11:47 run_atlas
[2026-03-10 11:52:24] -rw-r--r--. 1 boinc boinc       105 Mar 10 11:47 job.xml
[2026-03-10 11:52:24] -rw-r--r--. 2 boinc boinc 275562864 Mar 10 11:47 EVNT.48958551._000155.pool.root.1
[2026-03-10 11:52:24] -rw-r--r--. 2 boinc boinc     15845 Mar 10 11:47 start_atlas.sh
[2026-03-10 11:52:24] drwxrwx--x. 2 boinc boinc      4096 Mar 10 11:47 shared
[2026-03-10 11:52:24] -rw-r--r--. 2 boinc boinc    597949 Mar 10 11:47 input.tar.gz
[2026-03-10 11:52:24] -rw-r--r--. 1 boinc boinc      6594 Mar 10 11:47 init_data.xml
[2026-03-10 11:52:24] -rw-r--r--. 1 boinc boinc         0 Mar 10 11:47 boinc_lockfile
[2026-03-10 11:52:24] -rw-r--r--. 1 boinc boinc      2514 Mar 10 11:47 pandaJob.out
[2026-03-10 11:52:24] -rw-------. 1 boinc boinc   1006644 Mar 10 11:48 agis_schedconf.cvmfs.json
[2026-03-10 11:52:24] -rw-------. 1 boinc boinc   1511578 Mar 10 11:48 agis_ddmendpoints.agis.ALL.json
[2026-03-10 11:52:24] -rw-------. 1 boinc boinc       444 Mar 10 11:48 workernode_map.json
[2026-03-10 11:52:24] drwx------. 5 boinc boinc      4096 Mar 10 11:48 pilot3
[2026-03-10 11:52:24] -rw-r--r--. 1 boinc boinc       523 Mar 10 11:49 boinc_task_state.xml
[2026-03-10 11:52:24] -rw-------. 1 boinc boinc       957 Mar 10 11:49 memory_monitor_summary.json
[2026-03-10 11:52:24] -rw-------. 1 boinc boinc     20693 Mar 10 11:49 log.48958554._003931.job.log.tgz.1
[2026-03-10 11:52:24] -rw-------. 1 boinc boinc        95 Mar 10 11:51 pilot_heartbeat.json
[2026-03-10 11:52:24] -rw-------. 1 boinc boinc      7004 Mar 10 11:51 heartbeat.json
[2026-03-10 11:52:24] -rw-r--r--. 1 boinc boinc      8192 Mar 10 11:52 boinc_mmap_file
[2026-03-10 11:52:24] -rw-r--r--. 1 boinc boinc        22 Mar 10 11:52 wrapper_checkpoint.txt
[2026-03-10 11:52:24] -rw-------. 1 boinc boinc      5004 Mar 10 11:52 pilotlog.txt
[2026-03-10 11:52:24] -rw-------. 1 boinc boinc     82818 Mar 10 11:52 log.48958554._003931.job.log.1
[2026-03-10 11:52:24] -rw-------. 1 boinc boinc       188 Mar 10 11:52 output.list
[2026-03-10 11:52:24] -rw-r--r--. 1 boinc boinc       620 Mar 10 11:52 runtime_log
[2026-03-10 11:52:24] -rw-------. 1 boinc boinc    122880 Mar 10 11:52 result.tar.gz
[2026-03-10 11:52:24] -rw-------. 1 boinc boinc       644 Mar 10 11:52 VA6MDmtvCK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmA9fLDmDMxeSn.diag
[2026-03-10 11:52:24] -rw-r--r--. 1 boinc boinc      8635 Mar 10 11:52 runtime_log.err
[2026-03-10 11:52:24] -rw-r--r--. 1 boinc boinc     21692 Mar 10 11:52 stderr.txt
[2026-03-10 11:52:25] No HITS result produced
[2026-03-10 11:52:25]  *** Contents of shared directory: ***
[2026-03-10 11:52:25] total 269832
[2026-03-10 11:52:25] -rw-r--r--. 2 boinc boinc 275562864 Mar 10 11:47 ATLAS.root_0
[2026-03-10 11:52:25] -rw-r--r--. 2 boinc boinc     15845 Mar 10 11:47 start_atlas.sh
[2026-03-10 11:52:25] -rw-r--r--. 2 boinc boinc    597949 Mar 10 11:47 input.tar.gz
[2026-03-10 11:52:25] -rw-------. 1 boinc boinc    122880 Mar 10 11:52 result.tar.gz
11:52:26 (862923): run_atlas exited; CPU time 18.403664
11:52:26 (862923): called boinc_finish(0)

</stderr_txt>
]]>

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