Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:54:39 (2442939): wrapper (7.7.26015): starting
02:54:39 (2442939): wrapper: running run_atlas (--nthreads 4)
[2026-03-12 02:54:39] Arguments: --nthreads 4
[2026-03-12 02:54:39] Threads: 4
[2026-03-12 02:54:39] Checking for CVMFS
[2026-03-12 02:54:39] No cvmfs_config command found, will try listing directly
[2026-03-12 02:54:39] CVMFS is ok
[2026-03-12 02:54:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 02:54:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 02:54:39] Further information can be found at the LHC@home message board.
[2026-03-12 02:54:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 02:54:39] Checking for apptainer binary...
[2026-03-12 02:54:39] which: no apptainer in ((null))
[2026-03-12 02:54:39] apptainer is not installed, using version from CVMFS
[2026-03-12 02:54:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 02:54:39] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot196/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-03-12 02:54:39] apptainer works
[2026-03-12 02:54:39] Set ATHENA_PROC_NUMBER=4
[2026-03-12 02:54:39] Set ATHENA_CORE_NUMBER=4
[2026-03-12 02:54:39] Starting ATLAS job with PandaID=7049156969
[2026-03-12 02:54:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot196/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 04:44:49]  *** The last 200 lines of the pilot log: ***
[2026-03-12 04:44:49]  replicas=None
[2026-03-12 04:44:49]  scope=mc23_13p6TeV
[2026-03-12 04:44:49]  status=None
[2026-03-12 04:44:49]  status_code=0
[2026-03-12 04:44:49]  storage_token=
[2026-03-12 04:44:49]  surl=/var/lib/boinc/var/slot196/slots/0/PanDA_Pilot-7049156969/log.48967085._001898.job.log.tgz.1
[2026-03-12 04:44:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2c/98/log.48967085._001898.job.log.tgz.1
[2026-03-12 04:44:49]  workdir=None
[2026-03-12 04:44:49] ]
[2026-03-12 04:44:49] 2026-03-12 03:33:35,616 | INFO     | transferring file log.48967085._001898.job.log.tgz.1 from /var/lib/boinc/var/slot196/slots/0/PanDA_Pilot-7049156969/log.48967085._001898.job.log.tgz.1 to /var/lib/
[2026-03-12 04:44:49] 2026-03-12 03:33:35,616 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot196/slots/0/PanDA_Pilot-7049156969/log.48967085._001898.job.log.tgz.1 /var/lib/boinc/var/slot196/slots/0/
[2026-03-12 04:44:49] 2026-03-12 03:33:35,634 | INFO     | adding to output.list: log.48967085._001898.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2c/98/log.48967085._001898.job.log.tg
[2026-03-12 04:44:49] 2026-03-12 03:33:35,634 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-12 04:44:49] 2026-03-12 03:33:35,635 | INFO     | summary of transferred files:
[2026-03-12 04:44:49] 2026-03-12 03:33:35,635 | INFO     |  -- lfn=log.48967085._001898.job.log.tgz.1, status_code=0, status=transferred
[2026-03-12 04:44:49] 2026-03-12 03:33:35,635 | INFO     | stage-out finished correctly
[2026-03-12 04:44:49] 2026-03-12 03:33:35,804 | WARNING  | process 2497565 can no longer be monitored (due to stat problems) - aborting
[2026-03-12 04:44:49] 2026-03-12 03:33:35,804 | INFO     | using path: /var/lib/boinc/var/slot196/slots/0/PanDA_Pilot-7049156969/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 04:44:49] 2026-03-12 03:33:35,804 | INFO     | using path: /var/lib/boinc/var/slot196/slots/0/PanDA_Pilot-7049156969/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 04:44:49] 2026-03-12 03:33:35,805 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-12 04:44:49] 2026-03-12 03:33:35,805 | WARNING  | maxPSS not found in memory monitor output
[2026-03-12 04:44:49] 2026-03-12 03:33:36,062 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-12 04:44:49] 2026-03-12 03:33:36,304 | INFO     | number of running child processes to parent process 2497565: 1
[2026-03-12 04:44:49] 2026-03-12 03:33:36,304 | INFO     | maximum number of monitored processes: 6
[2026-03-12 04:44:49] 2026-03-12 03:33:37,549 | INFO     | time since job start (5925s) is within the limit (345600.0s)
[2026-03-12 04:44:49] 2026-03-12 03:33:38,807 | INFO     | monitor loop #426: job 0:7049156969 is in state 'finished'
[2026-03-12 04:44:49] 2026-03-12 03:33:38,808 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-12 04:44:49] 2026-03-12 03:33:38,811 | INFO     | job 7049156969 has state=finished
[2026-03-12 04:44:49] 2026-03-12 03:33:38,811 | INFO     | preparing for final server update for job 7049156969 in state='finished'
[2026-03-12 04:44:49] 2026-03-12 03:33:38,811 | INFO     | reading metadata from: /var/lib/boinc/var/slot196/slots/0/PanDA_Pilot-7049156969/jobReport.json
[2026-03-12 04:44:49] 2026-03-12 03:33:38,812 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot196/slots/0/workernode_map.json
[2026-03-12 04:44:49] 2026-03-12 03:33:38,812 | INFO     | this job has now completed (state=finished)
[2026-03-12 04:44:49] 2026-03-12 03:33:38,812 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-12 04:44:49] 2026-03-12 03:33:38,812 | INFO     | log transfer has been attempted: DONE
[2026-03-12 04:44:49] 2026-03-12 03:33:38,812 | INFO     | job 7049156969 has finished - writing final server update
[2026-03-12 04:44:49] 2026-03-12 03:33:38,813 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_470263/.job.ad'
[2026-03-12 04:44:49] 2026-03-12 03:33:38,813 | INFO     | total number of processed events: 400 (read)
[2026-03-12 04:44:49] 2026-03-12 03:33:38,830 | INFO     | using path: /var/lib/boinc/var/slot196/slots/0/PanDA_Pilot-7049156969/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 04:44:49] 2026-03-12 03:33:38,831 | INFO     | extracted standard info from prmon json
[2026-03-12 04:44:49] 2026-03-12 03:33:38,831 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 04:44:49] 2026-03-12 03:33:38,831 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 04:44:49] 2026-03-12 03:33:38,831 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 04:44:49] 2026-03-12 03:33:38,831 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 04:44:49] 2026-03-12 03:33:38,832 | INFO     | fitting pss+swap vs Time
[2026-03-12 04:44:49] 2026-03-12 03:33:38,832 | INFO     | sum of square deviations: 226022842.5
[2026-03-12 04:44:49] 2026-03-12 03:33:38,833 | INFO     | sum of deviations: 594675702.0
[2026-03-12 04:44:49] 2026-03-12 03:33:38,833 | INFO     | mean x: 1773283533.5
[2026-03-12 04:44:49] 2026-03-12 03:33:38,833 | INFO     | mean y: 2327007.311111111
[2026-03-12 04:44:49] 2026-03-12 03:33:38,833 | INFO     | intersect: -4663257313.570762
[2026-03-12 04:44:49] 2026-03-12 03:33:38,833 | INFO     | chi2: 0.0005905726328950847
[2026-03-12 04:44:49] 2026-03-12 03:33:38,833 | INFO     | current memory leak: 2.63 B/s (using 90 data points, chi2=0.00)
[2026-03-12 04:44:49] 2026-03-12 03:33:38,833 | INFO     | could have reported an average CPU frequency of 3581 MHz (7 samples)
[2026-03-12 04:44:49] 2026-03-12 03:33:38,833 | INFO     | ..............................
[2026-03-12 04:44:49] 2026-03-12 03:33:38,833 | INFO     | . Timing measurements:
[2026-03-12 04:44:49] 2026-03-12 03:33:38,834 | INFO     | . get job = 0 s
[2026-03-12 04:44:49] 2026-03-12 03:33:38,834 | INFO     | . initial setup = 5 s
[2026-03-12 04:44:49] 2026-03-12 03:33:38,834 | INFO     | . payload setup = 5 s
[2026-03-12 04:44:49] 2026-03-12 03:33:38,834 | INFO     | . stage-in = 0 s
[2026-03-12 04:44:49] 2026-03-12 03:33:38,834 | INFO     | . payload execution = 5901 s
[2026-03-12 04:44:49] 2026-03-12 03:33:38,834 | INFO     | . stage-out = 0 s
[2026-03-12 04:44:49] 2026-03-12 03:33:38,834 | INFO     | . log creation = 0 s
[2026-03-12 04:44:49] 2026-03-12 03:33:38,834 | INFO     | ..............................
[2026-03-12 04:44:49] 2026-03-12 03:33:38,881 | INFO     | 
[2026-03-12 04:44:49] 2026-03-12 03:33:38,881 | INFO     | job summary report
[2026-03-12 04:44:49] 2026-03-12 03:33:38,881 | INFO     | --------------------------------------------------
[2026-03-12 04:44:49] 2026-03-12 03:33:38,881 | INFO     | PanDA job id: 7049156969
[2026-03-12 04:44:49] 2026-03-12 03:33:38,881 | INFO     | task id: 48967085
[2026-03-12 04:44:49] 2026-03-12 03:33:38,881 | INFO     | errors: (none)
[2026-03-12 04:44:49] 2026-03-12 03:33:38,881 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 04:44:49] 2026-03-12 03:33:38,881 | INFO     | pilot state: finished 
[2026-03-12 04:44:49] 2026-03-12 03:33:38,881 | INFO     | transexitcode: 0
[2026-03-12 04:44:49] 2026-03-12 03:33:38,881 | INFO     | exeerrorcode: 0
[2026-03-12 04:44:49] 2026-03-12 03:33:38,881 | INFO     | exeerrordiag: 
[2026-03-12 04:44:49] 2026-03-12 03:33:38,881 | INFO     | exitcode: 0
[2026-03-12 04:44:49] 2026-03-12 03:33:38,881 | INFO     | exitmsg: OK
[2026-03-12 04:44:49] 2026-03-12 03:33:38,881 | INFO     | cpuconsumptiontime: 22640 s
[2026-03-12 04:44:49] 2026-03-12 03:33:38,881 | INFO     | nevents: 400
[2026-03-12 04:44:49] 2026-03-12 03:33:38,881 | INFO     | neventsw: 0
[2026-03-12 04:44:49] 2026-03-12 03:33:38,881 | INFO     | pid: 2497565
[2026-03-12 04:44:49] 2026-03-12 03:33:38,881 | INFO     | pgrp: 2497565
[2026-03-12 04:44:49] 2026-03-12 03:33:38,881 | INFO     | corecount: 4
[2026-03-12 04:44:49] 2026-03-12 03:33:38,881 | INFO     | event service: False
[2026-03-12 04:44:49] 2026-03-12 03:33:38,881 | INFO     | sizes: {0: 2279147, 1: 2280277, 11: 2280277, 5912: 2316058, 5913: 2316058, 5916: 2316252}
[2026-03-12 04:44:49] 2026-03-12 03:33:38,881 | INFO     | --------------------------------------------------
[2026-03-12 04:44:49] 2026-03-12 03:33:38,882 | INFO     | 
[2026-03-12 04:44:49] 2026-03-12 03:33:38,882 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot196/slots/0
[2026-03-12 04:44:49] 2026-03-12 03:33:38,902 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 04:44:49] 2026-03-12 03:33:38,902 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 04:44:49] 2026-03-12 03:33:38,902 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 04:44:49] 2026-03-12 03:33:38,902 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 04:44:49] 2026-03-12 03:33:38,903 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 04:44:49] 2026-03-12 03:33:38,903 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 04:44:49] 2026-03-12 03:33:38,903 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 04:44:49] 2026-03-12 03:33:38,903 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 04:44:49] 2026-03-12 03:33:38,903 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 04:44:49] 2026-03-12 03:33:38,903 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 04:44:49] 2026-03-12 03:33:38,903 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 04:44:49] 2026-03-12 03:33:38,903 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 04:44:49] 2026-03-12 03:33:38,903 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 04:44:49] 2026-03-12 03:33:38,903 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 04:44:49] 2026-03-12 03:33:38,903 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 04:44:49] 2026-03-12 03:33:38,903 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 04:44:49] 2026-03-12 03:33:38,903 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 04:44:49] 2026-03-12 03:33:38,903 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 04:44:49] 2026-03-12 03:33:38,903 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 04:44:49] 2026-03-12 03:33:38,903 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 04:44:49] 2026-03-12 03:33:38,903 | INFO     | job 7049156969 has completed (purged errors)
[2026-03-12 04:44:49] 2026-03-12 03:33:38,903 | INFO     | overall cleanup function is called
[2026-03-12 04:44:49] 2026-03-12 03:33:39,909 | INFO     | --- collectZombieJob: --- 10, [2497565]
[2026-03-12 04:44:49] 2026-03-12 03:33:39,910 | INFO     | zombie collector waiting for pid 2497565
[2026-03-12 04:44:49] 2026-03-12 03:33:39,910 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 04:44:49] 2026-03-12 03:33:39,910 | INFO     | collected zombie processes
[2026-03-12 04:44:49] 2026-03-12 03:33:39,910 | INFO     | will attempt to kill all subprocesses of pid=2497565
[2026-03-12 04:44:49] 2026-03-12 03:33:40,369 | INFO     | process IDs to be killed: [2497565] (in reverse order)
[2026-03-12 04:44:49] 2026-03-12 03:33:40,573 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 04:44:49] 2026-03-12 03:33:40,576 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 04:44:49] 2026-03-12 03:33:40,605 | INFO     | did not find any defunct processes belonging to 2497565
[2026-03-12 04:44:49] 2026-03-12 03:33:40,630 | INFO     | did not find any defunct processes belonging to 2497565
[2026-03-12 04:44:49] 2026-03-12 03:33:40,630 | INFO     | ready for new job
[2026-03-12 04:44:49] 2026-03-12 03:33:40,630 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 04:44:49] 2026-03-12 03:33:40,631 | INFO     | **************************************
[2026-03-12 04:44:49] 2026-03-12 03:33:40,631 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-12 04:44:49] 2026-03-12 03:33:40,631 | INFO     | **************************************
[2026-03-12 04:44:49] 2026-03-12 03:33:40,631 | INFO     | 
[2026-03-12 04:44:49] 2026-03-12 03:33:40,637 | INFO     | architecture information:
[2026-03-12 04:44:49] 2026-03-12 03:33:40,637 | INFO     | executing command: cat /etc/os-release
[2026-03-12 04:44:49] 2026-03-12 03:33:40,653 | INFO     | cat /etc/os-release:
[2026-03-12 04:44:49] NAME="CentOS Linux"
[2026-03-12 04:44:49] VERSION="7 (Core)"
[2026-03-12 04:44:49] ID="centos"
[2026-03-12 04:44:49] ID_LIKE="rhel fedora"
[2026-03-12 04:44:49] VERSION_ID="7"
[2026-03-12 04:44:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 04:44:49] ANSI_COLOR="0;31"
[2026-03-12 04:44:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 04:44:49] HOME_URL="https://www.centos.org/"
[2026-03-12 04:44:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 04:44:49] 
[2026-03-12 04:44:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 04:44:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 04:44:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 04:44:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 04:44:49] 
[2026-03-12 04:44:49] 2026-03-12 03:33:40,654 | INFO     | **************************************
[2026-03-12 04:44:49] 2026-03-12 03:33:41,157 | INFO     | executing command: df -mP /var/lib/boinc/var/slot196/slots/0
[2026-03-12 04:44:49] 2026-03-12 03:33:41,174 | INFO     | sufficient remaining disk space (29797384192 B)
[2026-03-12 04:44:49] 2026-03-12 03:33:41,175 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 04:44:49] 2026-03-12 03:33:41,175 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 04:44:49] 2026-03-12 03:33:41,175 | INFO     | update_server=False
[2026-03-12 04:44:49] 2026-03-12 03:33:41,175 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 04:44:49] 2026-03-12 03:33:41,189 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 04:44:49] 2026-03-12 03:33:41,297 | INFO     | all data control threads have been joined
[2026-03-12 04:44:49] 2026-03-12 03:33:41,310 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-12 04:44:49] 2026-03-12 03:33:41,311 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-12 04:44:49] 2026-03-12 03:33:41,311 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 04:44:49] 2026-03-12 03:33:41,311 | INFO     | will abort loop
[2026-03-12 04:44:49] 2026-03-12 03:33:41,726 | INFO     | all payload control threads have been joined
[2026-03-12 04:44:49] 2026-03-12 03:33:42,113 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 04:44:49] 2026-03-12 03:33:42,180 | INFO     | [job] retrieve thread has finished
[2026-03-12 04:44:49] 2026-03-12 03:33:42,279 | INFO     | all job control threads have been joined
[2026-03-12 04:44:49] 2026-03-12 03:33:42,303 | INFO     | [data] control thread has finished
[2026-03-12 04:44:49] 2026-03-12 03:33:42,316 | INFO     | [job] job monitor thread has finished
[2026-03-12 04:44:49] 2026-03-12 03:33:42,394 | INFO     | [payload] validate_post thread has finished
[2026-03-12 04:44:49] 2026-03-12 03:33:42,732 | INFO     | [payload] control thread has finished
[2026-03-12 04:44:49] 2026-03-12 03:33:42,771 | INFO     | [job] validate thread has finished
[2026-03-12 04:44:49] 2026-03-12 03:33:42,818 | INFO     | [payload] failed_post thread has finished
[2026-03-12 04:44:49] 2026-03-12 03:33:42,832 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 04:44:49] 2026-03-12 03:33:42,988 | INFO     | [data] copytool_in thread has finished
[2026-03-12 04:44:49] 2026-03-12 03:33:43,069 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 04:44:49] 2026-03-12 03:33:43,191 | INFO     | [data] copytool_out thread has finished
[2026-03-12 04:44:49] 2026-03-12 03:33:43,284 | INFO     | [job] control thread has finished
[2026-03-12 04:44:49] 2026-03-12 03:33:43,447 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 04:44:49] 2026-03-12 03:33:43,888 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 04:44:49] 2026-03-12 03:33:44,893 | INFO     | [job] queue monitor thread has finished
[2026-03-12 04:44:49] 2026-03-12 03:33:46,118 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 04:44:49] 2026-03-12 03:33:52,017 | INFO     | job.realtimelogging is not enabled
[2026-03-12 04:44:49] 2026-03-12 03:33:53,021 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 04:44:49] 2026-03-12 03:34:01,913 | INFO     | [monitor] cgroup control has ended
[2026-03-12 04:44:49] 2026-03-12 03:34:03,114 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22745233119040)>', '<ExcThread(monitor, started 22744979982080)>']
[2026-03-12 04:44:49] 2026-03-12 03:34:08,139 | INFO     | all workflow threads have been joined
[2026-03-12 04:44:49] 2026-03-12 03:34:08,140 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 04:44:49] 2026-03-12 03:34:08,143 | INFO     | traces error code: 0
[2026-03-12 04:44:49] 2026-03-12 03:34:08,144 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 04:44:49] 2026-03-12 03:34:11,179 | INFO     | PID=2457930 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 04:44:49] 2026-03-12 03:34:11,179 | INFO     | .. there are 40 such processes running
[2026-03-12 04:44:49] 2026-03-12 03:34:11,179 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 04:44:49] 2026-03-12 03:34:11,179 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 04:44:49] 2026-03-12 03:34:11,179 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 04:44:49] 2026-03-12 03:34:11,179 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 04:44:49] 2026-03-12 03:34:11,179 | INFO     | [monitor] control thread has ended
[2026-03-12 04:44:49] 2026-03-12 03:34:11,303 [wrapper] ==== pilot stdout END ====
[2026-03-12 04:44:49] 2026-03-12 03:34:11,305 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 04:44:49] 2026-03-12 03:34:11,307 [wrapper] pilotpid: 2457930
[2026-03-12 04:44:49] 2026-03-12 03:34:11,309 [wrapper] Pilot exit status: 0
[2026-03-12 04:44:49] 2026-03-12 03:34:11,316 [wrapper] pandaids: 7049156969
[2026-03-12 04:44:49] 2026-03-12 03:34:11,448 [wrapper] cleanup supervisor_pilot 2858676 2457931
[2026-03-12 04:44:49] 2026-03-12 03:34:11,450 [wrapper] Test setup, not cleaning
[2026-03-12 04:44:49] 2026-03-12 03:34:11,453 [wrapper] apfmon messages muted
[2026-03-12 04:44:49] 2026-03-12 03:34:11,455 [wrapper] ==== wrapper stdout END ====
[2026-03-12 04:44:49] 2026-03-12 03:34:11,457 [wrapper] ==== wrapper stderr END ====
[2026-03-12 04:44:49]  *** Error codes and diagnostics ***
[2026-03-12 04:44:49]     "exeErrorCode": 0,
[2026-03-12 04:44:49]     "exeErrorDiag": "",
[2026-03-12 04:44:49]     "pilotErrorCode": 0,
[2026-03-12 04:44:49]     "pilotErrorDiag": "",
[2026-03-12 04:44:49]  *** Listing of results directory ***
[2026-03-12 04:44:49] total 408984
[2026-03-12 04:44:49] -rw-r--r--. 1 boinc boinc      5111 Mar 10 19:09 queuedata.json
[2026-03-12 04:44:49] -rwx------. 1 boinc boinc     36322 Mar 10 19:10 runpilot2-wrapper.sh
[2026-03-12 04:44:49] -rw-r--r--. 1 boinc boinc    585013 Mar 10 19:10 pilot3.tar.gz
[2026-03-12 04:44:49] -rw-r--r--. 1 boinc boinc       100 Mar 12 02:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 04:44:49] -rwxr-xr-x. 1 boinc boinc      7986 Mar 12 02:54 run_atlas
[2026-03-12 04:44:49] -rw-r--r--. 1 boinc boinc       105 Mar 12 02:54 job.xml
[2026-03-12 04:44:49] -rw-r--r--. 2 boinc boinc 211412601 Mar 12 02:54 EVNT.48967083._000076.pool.root.1
[2026-03-12 04:44:49] -rw-r--r--. 2 boinc boinc     15845 Mar 12 02:54 start_atlas.sh
[2026-03-12 04:44:49] drwxrwx--x. 2 boinc boinc      4096 Mar 12 02:54 shared
[2026-03-12 04:44:49] -rw-r--r--. 2 boinc boinc    597511 Mar 12 02:54 input.tar.gz
[2026-03-12 04:44:49] -rw-r--r--. 1 boinc boinc      6708 Mar 12 02:54 init_data.xml
[2026-03-12 04:44:49] -rw-r--r--. 1 boinc boinc         0 Mar 12 02:54 boinc_lockfile
[2026-03-12 04:44:49] -rw-r--r--. 1 boinc boinc      2561 Mar 12 02:54 pandaJob.out
[2026-03-12 04:44:49] -rw-------. 1 boinc boinc   1006235 Mar 12 02:54 agis_schedconf.cvmfs.json
[2026-03-12 04:44:49] -rw-------. 1 boinc boinc   1511578 Mar 12 02:54 agis_ddmendpoints.agis.ALL.json
[2026-03-12 04:44:49] -rw-------. 1 boinc boinc       443 Mar 12 02:54 workernode_map.json
[2026-03-12 04:44:49] drwx------. 5 boinc boinc      4096 Mar 12 02:54 pilot3
[2026-03-12 04:44:49] -rw-------. 1 boinc boinc 201154082 Mar 12 04:33 HITS.48967085._001898.pool.root.1
[2026-03-12 04:44:49] -rw-r--r--. 1 boinc boinc       527 Mar 12 04:33 boinc_task_state.xml
[2026-03-12 04:44:49] -rw-------. 1 boinc boinc      1029 Mar 12 04:33 memory_monitor_summary.json
[2026-03-12 04:44:49] -rw-------. 1 boinc boinc    298026 Mar 12 04:33 log.48967085._001898.job.log.tgz.1
[2026-03-12 04:44:49] -rw-------. 1 boinc boinc        95 Mar 12 04:33 pilot_heartbeat.json
[2026-03-12 04:44:49] -rw-------. 1 boinc boinc      6351 Mar 12 04:33 heartbeat.json
[2026-03-12 04:44:49] -rw-------. 1 boinc boinc       823 Mar 12 04:34 pilotlog.txt
[2026-03-12 04:44:49] -rw-------. 1 boinc boinc    854783 Mar 12 04:34 log.48967085._001898.job.log.1
[2026-03-12 04:44:49] -rw-------. 1 boinc boinc       357 Mar 12 04:34 output.list
[2026-03-12 04:44:49] -rw-r--r--. 1 boinc boinc       620 Mar 12 04:34 runtime_log
[2026-03-12 04:44:49] -rw-------. 1 boinc boinc   1167360 Mar 12 04:34 result.tar.gz
[2026-03-12 04:44:49] -rw-r--r--. 1 boinc boinc      9221 Mar 12 04:34 runtime_log.err
[2026-03-12 04:44:49] -rw-------. 1 boinc boinc       662 Mar 12 04:34 n8iKDmJiGK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmemgLDmPMtJSo.diag
[2026-03-12 04:44:49] -rw-r--r--. 1 boinc boinc        25 Mar 12 04:44 wrapper_checkpoint.txt
[2026-03-12 04:44:49] -rw-r--r--. 1 boinc boinc      8192 Mar 12 04:44 boinc_mmap_file
[2026-03-12 04:44:49] -rw-r--r--. 1 boinc boinc     21792 Mar 12 04:44 stderr.txt
[2026-03-12 04:44:49] HITS file was successfully produced:
[2026-03-12 04:44:49] -rw-------. 1 boinc boinc 201154082 Mar 12 04:33 shared/HITS.pool.root.1
[2026-03-12 04:44:49]  *** Contents of shared directory: ***
[2026-03-12 04:44:49] total 404648
[2026-03-12 04:44:49] -rw-r--r--. 2 boinc boinc 211412601 Mar 12 02:54 ATLAS.root_0
[2026-03-12 04:44:49] -rw-r--r--. 2 boinc boinc     15845 Mar 12 02:54 start_atlas.sh
[2026-03-12 04:44:49] -rw-r--r--. 2 boinc boinc    597511 Mar 12 02:54 input.tar.gz
[2026-03-12 04:44:49] -rw-------. 1 boinc boinc 201154082 Mar 12 04:33 HITS.pool.root.1
[2026-03-12 04:44:49] -rw-------. 1 boinc boinc   1167360 Mar 12 04:34 result.tar.gz
04:44:50 (2442939): run_atlas exited; CPU time 22915.038756
04:44:50 (2442939): called boinc_finish(0)

</stderr_txt>
]]>

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