Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:03:59 (677): wrapper (7.7.26015): starting
13:03:59 (677): wrapper: running run_atlas (--nthreads 8)
[2026-03-11 13:03:59] Arguments: --nthreads 8
[2026-03-11 13:03:59] Threads: 8
[2026-03-11 13:03:59] Checking for CVMFS
[2026-03-11 13:04:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 13:04:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 13:04:02] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 13:04:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 13:04:03] 2.11.2.0 28971 123232 106420 157153 2 93 19112149 25165824 1083 130560 153 43295164 99.843 30048706 1074 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-11 13:04:03] CVMFS is ok
[2026-03-11 13:04:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 13:04:03] Checking for apptainer binary...
[2026-03-11 13:04:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 13:04:03] Running /usr/bin/apptainer --version
[2026-03-11 13:04:04] apptainer version 1.3.2-1.el7
[2026-03-11 13:04:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 13:04:24] cg-vwn489.simple-grid.lan
[2026-03-11 13:04:24] apptainer works
[2026-03-11 13:04:24] Set ATHENA_PROC_NUMBER=8
[2026-03-11 13:04:24] Set ATHENA_CORE_NUMBER=8
[2026-03-11 13:04:24] Starting ATLAS job with PandaID=7048863230
[2026-03-11 13:04:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 18:35:34]  *** The last 200 lines of the pilot log: ***
[2026-03-11 18:35:34] 2026-03-11 17:34:29,780 | INFO     | intersect: -28449839242.130333
[2026-03-11 18:35:34] 2026-03-11 17:34:29,781 | INFO     | chi2: 6.927171701870793
[2026-03-11 18:35:34] 2026-03-11 17:34:29,781 | INFO     | sum of square deviations: 9148487810.0
[2026-03-11 18:35:34] 2026-03-11 17:34:29,784 | INFO     | sum of deviations: 172379197158.0
[2026-03-11 18:35:34] 2026-03-11 17:34:29,785 | INFO     | mean x: 1773240737.0
[2026-03-11 18:35:34] 2026-03-11 17:34:29,785 | INFO     | mean y: 2490987.6084142393
[2026-03-11 18:35:34] 2026-03-11 17:34:29,785 | INFO     | intersect: -33409568028.06843
[2026-03-11 18:35:34] 2026-03-11 17:34:29,785 | INFO     | chi2: 6.199087741635356
[2026-03-11 18:35:34] 2026-03-11 17:34:29,785 | INFO     | current chi2=6.199087741635356 (change=10.510551659038653 %)
[2026-03-11 18:35:34] 2026-03-11 17:34:29,786 | INFO     | right removable region: 308
[2026-03-11 18:35:34] 2026-03-11 17:34:29,786 | INFO     | sum of square deviations: 9148487810.0
[2026-03-11 18:35:34] 2026-03-11 17:34:29,789 | INFO     | sum of deviations: 44503703754.0
[2026-03-11 18:35:34] 2026-03-11 17:34:29,789 | INFO     | mean x: 1773241042.0
[2026-03-11 18:35:34] 2026-03-11 17:34:29,790 | INFO     | mean y: 2521866.203883495
[2026-03-11 18:35:34] 2026-03-11 17:34:29,790 | INFO     | intersect: -8623580682.825174
[2026-03-11 18:35:34] 2026-03-11 17:34:29,790 | INFO     | chi2: 2.325957194473503
[2026-03-11 18:35:34] 2026-03-11 17:34:29,790 | INFO     | current chi2=2.325957194473503 (change=66.42270042410901 %)
[2026-03-11 18:35:34] 2026-03-11 17:34:29,791 | INFO     | sum of square deviations: 8711530780.0
[2026-03-11 18:35:34] 2026-03-11 17:34:29,794 | INFO     | sum of deviations: -12294363431.5
[2026-03-11 18:35:34] 2026-03-11 17:34:29,794 | INFO     | mean x: 1773241194.5
[2026-03-11 18:35:34] 2026-03-11 17:34:29,794 | INFO     | mean y: 2541599.5559210526
[2026-03-11 18:35:34] 2026-03-11 17:34:29,794 | INFO     | intersect: 2505072124.6090827
[2026-03-11 18:35:34] 2026-03-11 17:34:29,795 | INFO     | chi2: 0.8658234095407997
[2026-03-11 18:35:34] 2026-03-11 17:34:29,795 | INFO     | current chi2=0.8658234095407997 (change=62.7756086140362 %)
[2026-03-11 18:35:34] 2026-03-11 17:34:29,796 | INFO     | sum of square deviations: 8288713550.0
[2026-03-11 18:35:34] 2026-03-11 17:34:29,799 | INFO     | sum of deviations: -15572796994.0
[2026-03-11 18:35:34] 2026-03-11 17:34:29,799 | INFO     | mean x: 1773241347.0
[2026-03-11 18:35:34] 2026-03-11 17:34:29,799 | INFO     | mean y: 2542766.856187291
[2026-03-11 18:35:34] 2026-03-11 17:34:29,799 | INFO     | intersect: 3334100475.01201
[2026-03-11 18:35:34] 2026-03-11 17:34:29,800 | INFO     | chi2: 0.8500291791760309
[2026-03-11 18:35:34] 2026-03-11 17:34:29,800 | INFO     | current chi2=0.8500291791760309 (change=1.8241861089370937 %)
[2026-03-11 18:35:34] 2026-03-11 17:34:29,800 | INFO     | left removable region: 30
[2026-03-11 18:35:34] 2026-03-11 17:34:29,800 | INFO     | sum of square deviations: 6662039329.5
[2026-03-11 18:35:34] 2026-03-11 17:34:29,803 | INFO     | sum of deviations: 15697984945.5
[2026-03-11 18:35:34] 2026-03-11 17:34:29,803 | INFO     | mean x: 1773241621.5
[2026-03-11 18:35:34] 2026-03-11 17:34:29,803 | INFO     | mean y: 2545787.5647482015
[2026-03-11 18:35:34] 2026-03-11 17:34:29,803 | INFO     | intersect: -4175802448.204401
[2026-03-11 18:35:34] 2026-03-11 17:34:29,804 | INFO     | chi2: 0.0008470890602013929
[2026-03-11 18:35:34] 2026-03-11 17:34:29,804 | INFO     | current memory leak: 2.36 B/s (using 278 data points, chi2=0.00)
[2026-03-11 18:35:34] 2026-03-11 17:34:29,805 | INFO     | could have reported an average CPU frequency of 2249 MHz (14 samples)
[2026-03-11 18:35:34] 2026-03-11 17:34:29,805 | INFO     | ..............................
[2026-03-11 18:35:34] 2026-03-11 17:34:29,805 | INFO     | . Timing measurements:
[2026-03-11 18:35:34] 2026-03-11 17:34:29,805 | INFO     | . get job = 0 s
[2026-03-11 18:35:34] 2026-03-11 17:34:29,805 | INFO     | . initial setup = 124 s
[2026-03-11 18:35:34] 2026-03-11 17:34:29,806 | INFO     | . payload setup = 149 s
[2026-03-11 18:35:34] 2026-03-11 17:34:29,806 | INFO     | . stage-in = 0 s
[2026-03-11 18:35:34] 2026-03-11 17:34:29,806 | INFO     | . payload execution = 19245 s
[2026-03-11 18:35:34] 2026-03-11 17:34:29,806 | INFO     | . stage-out = 1 s
[2026-03-11 18:35:34] 2026-03-11 17:34:29,806 | INFO     | . log creation = 0 s
[2026-03-11 18:35:34] 2026-03-11 17:34:29,806 | INFO     | ..............................
[2026-03-11 18:35:34] 2026-03-11 17:34:29,917 | INFO     | 
[2026-03-11 18:35:34] 2026-03-11 17:34:29,918 | INFO     | job summary report
[2026-03-11 18:35:34] 2026-03-11 17:34:29,918 | INFO     | --------------------------------------------------
[2026-03-11 18:35:34] 2026-03-11 17:34:29,918 | INFO     | PanDA job id: 7048863230
[2026-03-11 18:35:34] 2026-03-11 17:34:29,918 | INFO     | task id: 48997968
[2026-03-11 18:35:34] 2026-03-11 17:34:29,918 | INFO     | errors: (none)
[2026-03-11 18:35:34] 2026-03-11 17:34:29,918 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-11 18:35:34] 2026-03-11 17:34:29,918 | INFO     | pilot state: finished 
[2026-03-11 18:35:34] 2026-03-11 17:34:29,918 | INFO     | transexitcode: 0
[2026-03-11 18:35:34] 2026-03-11 17:34:29,918 | INFO     | exeerrorcode: 0
[2026-03-11 18:35:34] 2026-03-11 17:34:29,919 | INFO     | exeerrordiag: 
[2026-03-11 18:35:34] 2026-03-11 17:34:29,919 | INFO     | exitcode: 0
[2026-03-11 18:35:34] 2026-03-11 17:34:29,919 | INFO     | exitmsg: OK
[2026-03-11 18:35:34] 2026-03-11 17:34:29,919 | INFO     | cpuconsumptiontime: 81961 s
[2026-03-11 18:35:34] 2026-03-11 17:34:29,919 | INFO     | nevents: 400
[2026-03-11 18:35:34] 2026-03-11 17:34:29,919 | INFO     | neventsw: 0
[2026-03-11 18:35:34] 2026-03-11 17:34:29,919 | INFO     | pid: 9132
[2026-03-11 18:35:34] 2026-03-11 17:34:29,919 | INFO     | pgrp: 9132
[2026-03-11 18:35:34] 2026-03-11 17:34:29,919 | INFO     | corecount: 8
[2026-03-11 18:35:34] 2026-03-11 17:34:29,920 | INFO     | event service: False
[2026-03-11 18:35:34] 2026-03-11 17:34:29,920 | INFO     | sizes: {0: 2279145, 1: 2279747, 2: 2280232, 3: 2280292, 13: 2280320, 19398: 2313441, 19399: 2313568, 19400: 2322680, 19402: 2322818}
[2026-03-11 18:35:34] 2026-03-11 17:34:29,920 | INFO     | --------------------------------------------------
[2026-03-11 18:35:34] 2026-03-11 17:34:29,920 | INFO     | 
[2026-03-11 18:35:34] 2026-03-11 17:34:29,920 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-03-11 18:35:34] 2026-03-11 17:34:29,950 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-11 18:35:34] 2026-03-11 17:34:29,950 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-11 18:35:34] 2026-03-11 17:34:29,950 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-11 18:35:34] 2026-03-11 17:34:29,951 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-11 18:35:34] 2026-03-11 17:34:29,951 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-11 18:35:34] 2026-03-11 17:34:29,951 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-11 18:35:34] 2026-03-11 17:34:29,951 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-11 18:35:34] 2026-03-11 17:34:29,951 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-11 18:35:34] 2026-03-11 17:34:29,951 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-11 18:35:34] 2026-03-11 17:34:29,951 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-11 18:35:34] 2026-03-11 17:34:29,951 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-11 18:35:34] 2026-03-11 17:34:29,952 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-11 18:35:34] 2026-03-11 17:34:29,952 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-11 18:35:34] 2026-03-11 17:34:29,952 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-11 18:35:34] 2026-03-11 17:34:29,952 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-11 18:35:34] 2026-03-11 17:34:29,952 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-11 18:35:34] 2026-03-11 17:34:29,952 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-11 18:35:34] 2026-03-11 17:34:29,952 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-11 18:35:34] 2026-03-11 17:34:29,952 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-11 18:35:34] 2026-03-11 17:34:29,952 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-11 18:35:34] 2026-03-11 17:34:29,953 | INFO     | job 7048863230 has completed (purged errors)
[2026-03-11 18:35:34] 2026-03-11 17:34:29,953 | INFO     | overall cleanup function is called
[2026-03-11 18:35:34] 2026-03-11 17:34:30,961 | INFO     | --- collectZombieJob: --- 10, [9132]
[2026-03-11 18:35:34] 2026-03-11 17:34:30,961 | INFO     | zombie collector waiting for pid 9132
[2026-03-11 18:35:34] 2026-03-11 17:34:30,962 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-11 18:35:34] 2026-03-11 17:34:30,962 | INFO     | collected zombie processes
[2026-03-11 18:35:34] 2026-03-11 17:34:30,962 | INFO     | will attempt to kill all subprocesses of pid=9132
[2026-03-11 18:35:34] 2026-03-11 17:34:31,027 | INFO     | process IDs to be killed: [9132] (in reverse order)
[2026-03-11 18:35:34] 2026-03-11 17:34:31,072 | WARNING  | found no corresponding commands to process id(s)
[2026-03-11 18:35:34] 2026-03-11 17:34:31,073 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-11 18:35:34] 2026-03-11 17:34:31,075 | INFO     | did not find any defunct processes belonging to 9132
[2026-03-11 18:35:34] 2026-03-11 17:34:31,076 | INFO     | did not find any defunct processes belonging to 9132
[2026-03-11 18:35:34] 2026-03-11 17:34:31,077 | INFO     | ready for new job
[2026-03-11 18:35:34] 2026-03-11 17:34:31,077 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-11 18:35:34] 2026-03-11 17:34:31,079 | INFO     | **************************************
[2026-03-11 18:35:34] 2026-03-11 17:34:31,079 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-11 18:35:34] 2026-03-11 17:34:31,079 | INFO     | **************************************
[2026-03-11 18:35:34] 2026-03-11 17:34:31,079 | INFO     | 
[2026-03-11 18:35:34] 2026-03-11 17:34:31,080 | INFO     | pilot is running in a VM
[2026-03-11 18:35:34] 2026-03-11 17:34:31,080 | INFO     | architecture information:
[2026-03-11 18:35:34] 2026-03-11 17:34:31,080 | INFO     | executing command: cat /etc/os-release
[2026-03-11 18:35:34] 2026-03-11 17:34:31,099 | INFO     | cat /etc/os-release:
[2026-03-11 18:35:34] NAME="CentOS Linux"
[2026-03-11 18:35:34] VERSION="7 (Core)"
[2026-03-11 18:35:34] ID="centos"
[2026-03-11 18:35:34] ID_LIKE="rhel fedora"
[2026-03-11 18:35:34] VERSION_ID="7"
[2026-03-11 18:35:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-11 18:35:34] ANSI_COLOR="0;31"
[2026-03-11 18:35:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-11 18:35:34] HOME_URL="https://www.centos.org/"
[2026-03-11 18:35:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-11 18:35:34] 
[2026-03-11 18:35:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-11 18:35:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-11 18:35:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-11 18:35:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-11 18:35:34] 
[2026-03-11 18:35:34] 2026-03-11 17:34:31,100 | INFO     | **************************************
[2026-03-11 18:35:34] 2026-03-11 17:34:31,603 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-03-11 18:35:34] 2026-03-11 17:34:31,629 | INFO     | sufficient remaining disk space (497905827840 B)
[2026-03-11 18:35:34] 2026-03-11 17:34:31,630 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-11 18:35:34] 2026-03-11 17:34:31,630 | INFO     | current server update state: UPDATING_FINAL
[2026-03-11 18:35:34] 2026-03-11 17:34:31,630 | INFO     | update_server=False
[2026-03-11 18:35:34] 2026-03-11 17:34:31,630 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-11 18:35:34] 2026-03-11 17:34:31,630 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 18:35:34] 2026-03-11 17:34:31,631 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 18:35:34] 2026-03-11 17:34:32,051 | INFO     | all payload control threads have been joined
[2026-03-11 18:35:34] 2026-03-11 17:34:32,127 | INFO     | all job control threads have been joined
[2026-03-11 18:35:34] 2026-03-11 17:34:32,529 | INFO     | all data control threads have been joined
[2026-03-11 18:35:34] 2026-03-11 17:34:32,636 | INFO     | [job] retrieve thread has finished
[2026-03-11 18:35:34] 2026-03-11 17:34:32,636 | INFO     | [payload] validate_post thread has finished
[2026-03-11 18:35:34] 2026-03-11 17:34:32,637 | INFO     | [job] queue monitor thread has finished
[2026-03-11 18:35:34] 2026-03-11 17:34:32,731 | INFO     | job.realtimelogging is not enabled
[2026-03-11 18:35:34] 2026-03-11 17:34:32,945 | INFO     | [job] validate thread has finished
[2026-03-11 18:35:34] 2026-03-11 17:34:33,057 | INFO     | [payload] control thread has finished
[2026-03-11 18:35:34] 2026-03-11 17:34:33,119 | INFO     | [payload] failed_post thread has finished
[2026-03-11 18:35:34] 2026-03-11 17:34:33,131 | INFO     | [job] control thread has finished
[2026-03-11 18:35:34] 2026-03-11 17:34:33,502 | WARNING  | process 9132 can no longer be monitored (due to stat problems) - aborting
[2026-03-11 18:35:34] 2026-03-11 17:34:33,532 | INFO     | [data] control thread has finished
[2026-03-11 18:35:34] 2026-03-11 17:34:33,553 | INFO     | using path: /var/lib/boinc/slots/11/memory_monitor_summary.json (trf name=prmon)
[2026-03-11 18:35:34] 2026-03-11 17:34:33,554 | INFO     | reaping zombies for max 20 seconds
[2026-03-11 18:35:34] 2026-03-11 17:34:33,562 | INFO     | [data] copytool_in thread has finished
[2026-03-11 18:35:34] 2026-03-11 17:34:33,570 | INFO     | checking for looping job (in state=finished)
[2026-03-11 18:35:34] 2026-03-11 17:34:33,570 | INFO     | using looping job limit: 7200 s
[2026-03-11 18:35:34] 2026-03-11 17:34:33,571 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/slots/11/PanDA_Pilot-7048863230/payload.stdout) since it has not been created yet
[2026-03-11 18:35:34] 2026-03-11 17:34:33,571 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-03-11 18:35:34] 2026-03-11 17:34:33,597 | INFO     | sufficient remaining disk space (497905827840 B)
[2026-03-11 18:35:34] 2026-03-11 17:34:33,597 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-11 18:35:34] 2026-03-11 17:34:33,597 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/11/PanDA_Pilot-7048863230/HITS.48997968._001616.pool.root.1 since it does not exist
[2026-03-11 18:35:34] 2026-03-11 17:34:33,637 | INFO     | [data] copytool_out thread has finished
[2026-03-11 18:35:34] 2026-03-11 17:34:33,665 | INFO     | number of running child processes to parent process 9132: 1
[2026-03-11 18:35:34] 2026-03-11 17:34:33,665 | INFO     | maximum number of monitored processes: 8
[2026-03-11 18:35:34] 2026-03-11 17:34:33,665 | INFO     | aborting job monitoring since job object (job id=7048863230) has expired
[2026-03-11 18:35:34] 2026-03-11 17:34:33,665 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-11 18:35:34] 2026-03-11 17:34:33,665 | INFO     | will abort loop
[2026-03-11 18:35:34] 2026-03-11 17:34:33,678 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 18:35:34] 2026-03-11 17:34:33,715 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 18:35:34] 2026-03-11 17:34:33,737 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 18:35:34] 2026-03-11 17:34:33,910 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 18:35:34] 2026-03-11 17:34:34,671 | INFO     | [job] job monitor thread has finished
[2026-03-11 18:35:34] 2026-03-11 17:34:34,675 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 18:35:34] 2026-03-11 17:34:38,681 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 18:35:34] 2026-03-11 17:35:01,194 | INFO     | PID=4683 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-11 18:35:34] 2026-03-11 17:35:01,195 | INFO     | .. there are 2 such processes running
[2026-03-11 18:35:34] 2026-03-11 17:35:01,195 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 18:35:34] 2026-03-11 17:35:01,195 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 18:35:34] 2026-03-11 17:35:01,195 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 18:35:34] 2026-03-11 17:35:27,816 | INFO     | [monitor] cgroup control has ended
[2026-03-11 18:35:34] 2026-03-11 17:35:28,820 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140174535001920)>', '<ExcThread(monitor, started 140173933258496)>']
[2026-03-11 18:35:34] 2026-03-11 17:35:29,325 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 18:35:34] 2026-03-11 17:35:29,326 | INFO     | [monitor] control thread has ended
[2026-03-11 18:35:34] 2026-03-11 17:35:33,823 | INFO     | all workflow threads have been joined
[2026-03-11 18:35:34] 2026-03-11 17:35:33,823 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 18:35:34] 2026-03-11 17:35:33,823 | INFO     | traces error code: 0
[2026-03-11 18:35:34] 2026-03-11 17:35:33,824 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 18:35:34] 2026-03-11 17:35:33,965 [wrapper] ==== pilot stdout END ====
[2026-03-11 18:35:34] 2026-03-11 17:35:33,970 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 18:35:34] 2026-03-11 17:35:33,975 [wrapper] pilotpid: 4683
[2026-03-11 18:35:34] 2026-03-11 17:35:33,979 [wrapper] Pilot exit status: 0
[2026-03-11 18:35:34] 2026-03-11 17:35:34,007 [wrapper] pandaids: 7048863230
[2026-03-11 18:35:34] 2026-03-11 17:35:34,067 [wrapper] cleanup supervisor_pilot 16967 4684
[2026-03-11 18:35:34] 2026-03-11 17:35:34,073 [wrapper] Test setup, not cleaning
[2026-03-11 18:35:34] 2026-03-11 17:35:34,084 [wrapper] apfmon messages muted
[2026-03-11 18:35:34] 2026-03-11 17:35:34,088 [wrapper] ==== wrapper stdout END ====
[2026-03-11 18:35:34] 2026-03-11 17:35:34,091 [wrapper] ==== wrapper stderr END ====
[2026-03-11 18:35:34]  *** Error codes and diagnostics ***
[2026-03-11 18:35:34]     "exeErrorCode": 0,
[2026-03-11 18:35:34]     "exeErrorDiag": "",
[2026-03-11 18:35:34]     "pilotErrorCode": 0,
[2026-03-11 18:35:34]     "pilotErrorDiag": "",
[2026-03-11 18:35:34]  *** Listing of results directory ***
[2026-03-11 18:35:34] total 649332
[2026-03-11 18:35:34] -rw-r--r--. 1 boinc boinc    584627 Mar 10 15:07 pilot3.tar.gz
[2026-03-11 18:35:34] -rw-r--r--. 1 boinc boinc      5111 Mar 10 15:09 queuedata.json
[2026-03-11 18:35:34] -rwx------. 1 boinc boinc     36322 Mar 10 15:11 runpilot2-wrapper.sh
[2026-03-11 18:35:34] -rw-r--r--. 1 boinc boinc       100 Mar 11 13:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 18:35:34] -rwxr-xr-x. 1 boinc boinc      7986 Mar 11 13:03 run_atlas
[2026-03-11 18:35:34] -rw-r--r--. 1 boinc boinc       105 Mar 11 13:03 job.xml
[2026-03-11 18:35:34] -rw-r--r--. 1 boinc boinc      6391 Mar 11 13:03 init_data.xml
[2026-03-11 18:35:34] -rw-r--r--. 2 boinc boinc 359558788 Mar 11 13:03 EVNT.48997965._000063.pool.root.1
[2026-03-11 18:35:34] -rw-r--r--. 2 boinc boinc     15845 Mar 11 13:03 start_atlas.sh
[2026-03-11 18:35:34] drwxrwx--x. 2 boinc boinc        68 Mar 11 13:03 shared
[2026-03-11 18:35:34] -rw-r--r--. 2 boinc boinc    597957 Mar 11 13:03 input.tar.gz
[2026-03-11 18:35:34] -rw-r--r--. 1 boinc boinc         0 Mar 11 13:03 boinc_lockfile
[2026-03-11 18:35:34] -rw-r--r--. 1 boinc boinc      2563 Mar 11 13:04 pandaJob.out
[2026-03-11 18:35:34] -rw-------. 1 boinc boinc       415 Mar 11 13:10 workernode_map.json
[2026-03-11 18:35:34] -rw-------. 1 boinc boinc   1007002 Mar 11 13:10 agis_schedconf.cvmfs.json
[2026-03-11 18:35:34] drwx------. 5 boinc boinc      4096 Mar 11 13:10 pilot3
[2026-03-11 18:35:34] -rw-------. 1 boinc boinc 294924823 Mar 11 18:33 HITS.48997968._001616.pool.root.1
[2026-03-11 18:35:34] -rw-r--r--. 1 boinc boinc       531 Mar 11 18:33 boinc_task_state.xml
[2026-03-11 18:35:34] -rw-------. 1 boinc boinc        95 Mar 11 18:34 pilot_heartbeat.json
[2026-03-11 18:35:34] -rw-------. 1 boinc boinc      1020 Mar 11 18:34 memory_monitor_summary.json
[2026-03-11 18:35:34] -rw-------. 1 boinc boinc   1511578 Mar 11 18:34 agis_ddmendpoints.agis.ALL.json
[2026-03-11 18:35:34] -rw-------. 1 boinc boinc    536076 Mar 11 18:34 log.48997968._001616.job.log.tgz.1
[2026-03-11 18:35:34] -rw-------. 1 boinc boinc      6320 Mar 11 18:34 heartbeat.json
[2026-03-11 18:35:34] -rw-r--r--. 1 boinc boinc      8192 Mar 11 18:35 boinc_mmap_file
[2026-03-11 18:35:34] -rw-r--r--. 1 boinc boinc        28 Mar 11 18:35 wrapper_checkpoint.txt
[2026-03-11 18:35:34] -rw-------. 1 boinc boinc      6336 Mar 11 18:35 pilotlog.txt
[2026-03-11 18:35:34] -rw-------. 1 boinc boinc   2719312 Mar 11 18:35 log.48997968._001616.job.log.1
[2026-03-11 18:35:34] -rw-------. 1 boinc boinc       357 Mar 11 18:35 output.list
[2026-03-11 18:35:34] -rw-r--r--. 1 boinc boinc       620 Mar 11 18:35 runtime_log
[2026-03-11 18:35:34] -rw-------. 1 boinc boinc   3276800 Mar 11 18:35 result.tar.gz
[2026-03-11 18:35:34] -rw-r--r--. 1 boinc boinc      8832 Mar 11 18:35 runtime_log.err
[2026-03-11 18:35:34] -rw-------. 1 boinc boinc       655 Mar 11 18:35 fayMDmxyCK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmAEgLDmU4XXMm.diag
[2026-03-11 18:35:34] -rw-r--r--. 1 boinc boinc     21030 Mar 11 18:35 stderr.txt
[2026-03-11 18:35:34] HITS file was successfully produced:
[2026-03-11 18:35:34] -rw-------. 1 boinc boinc 294924823 Mar 11 18:33 shared/HITS.pool.root.1
[2026-03-11 18:35:34]  *** Contents of shared directory: ***
[2026-03-11 18:35:34] total 642948
[2026-03-11 18:35:34] -rw-r--r--. 2 boinc boinc 359558788 Mar 11 13:03 ATLAS.root_0
[2026-03-11 18:35:34] -rw-r--r--. 2 boinc boinc     15845 Mar 11 13:03 start_atlas.sh
[2026-03-11 18:35:34] -rw-r--r--. 2 boinc boinc    597957 Mar 11 13:03 input.tar.gz
[2026-03-11 18:35:34] -rw-------. 1 boinc boinc 294924823 Mar 11 18:33 HITS.pool.root.1
[2026-03-11 18:35:34] -rw-------. 1 boinc boinc   3276800 Mar 11 18:35 result.tar.gz
18:35:35 (677): run_atlas exited; CPU time 82156.840667
18:35:35 (677): called boinc_finish(0)

</stderr_txt>
]]>

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