Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:32:26 (330310): wrapper (7.7.26015): starting
14:32:26 (330310): wrapper: running run_atlas (--nthreads 4)
[2026-03-11 14:32:26] Arguments: --nthreads 4
[2026-03-11 14:32:26] Threads: 4
[2026-03-11 14:32:26] Checking for CVMFS
[2026-03-11 14:32:26] No cvmfs_config command found, will try listing directly
[2026-03-11 14:32:26] CVMFS is ok
[2026-03-11 14:32:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 14:32:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-11 14:32:26] Further information can be found at the LHC@home message board.
[2026-03-11 14:32:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 14:32:26] Checking for apptainer binary...
[2026-03-11 14:32:26] which: no apptainer in ((null))
[2026-03-11 14:32:26] apptainer is not installed, using version from CVMFS
[2026-03-11 14:32:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 14:32:26] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot88/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut19.grid.cesnet.cz
[2026-03-11 14:32:26] apptainer works
[2026-03-11 14:32:26] Set ATHENA_PROC_NUMBER=4
[2026-03-11 14:32:26] Set ATHENA_CORE_NUMBER=4
[2026-03-11 14:32:26] Starting ATLAS job with PandaID=7047975072
[2026-03-11 14:32:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot88/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
16:27:07 (1484634): wrapper (7.7.26015): starting
16:27:07 (1484634): wrapper: running run_atlas (--nthreads 4)
[2026-03-11 16:27:07] Arguments: --nthreads 4
[2026-03-11 16:27:07] Threads: 4
[2026-03-11 16:27:07] This job has been restarted, cleaning up previous attempt
[2026-03-11 16:27:07] Checking for CVMFS
[2026-03-11 16:27:07] No cvmfs_config command found, will try listing directly
[2026-03-11 16:27:07] CVMFS is ok
[2026-03-11 16:27:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 16:27:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-11 16:27:07] Further information can be found at the LHC@home message board.
[2026-03-11 16:27:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 16:27:07] Checking for apptainer binary...
[2026-03-11 16:27:07] which: no apptainer in ((null))
[2026-03-11 16:27:07] apptainer is not installed, using version from CVMFS
[2026-03-11 16:27:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 16:27:07] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot88/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut19.grid.cesnet.cz
[2026-03-11 16:27:07] apptainer works
[2026-03-11 16:27:07] Set ATHENA_PROC_NUMBER=4
[2026-03-11 16:27:07] Set ATHENA_CORE_NUMBER=4
[2026-03-11 16:27:08] Starting ATLAS job with PandaID=7047975072
[2026-03-11 16:27:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot88/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 18:16:18]  *** The last 200 lines of the pilot log: ***
[2026-03-11 18:16:18] 2026-03-11 17:12:00,842 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-11 18:16:18] 2026-03-11 17:12:00,842 | INFO     | log transfer has been attempted: DONE
[2026-03-11 18:16:18] 2026-03-11 17:12:00,842 | INFO     | job 7047975072 has finished - writing final server update
[2026-03-11 18:16:18] 2026-03-11 17:12:00,846 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1431795/.job.ad'
[2026-03-11 18:16:18] 2026-03-11 17:12:00,846 | INFO     | total number of processed events: 400 (read)
[2026-03-11 18:16:18] 2026-03-11 17:12:00,870 | INFO     | using path: /var/lib/boinc/var/slot88/slots/2/PanDA_Pilot-7047975072/memory_monitor_summary.json (trf name=prmon)
[2026-03-11 18:16:18] 2026-03-11 17:12:00,870 | INFO     | extracted standard info from prmon json
[2026-03-11 18:16:18] 2026-03-11 17:12:00,870 | INFO     | extracted standard memory fields from prmon json
[2026-03-11 18:16:18] 2026-03-11 17:12:00,870 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-11 18:16:18] 2026-03-11 17:12:00,871 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-11 18:16:18] 2026-03-11 17:12:00,871 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-11 18:16:18] 2026-03-11 17:12:00,872 | INFO     | fitting pss+swap vs Time
[2026-03-11 18:16:18] 2026-03-11 17:12:00,872 | INFO     | sum of square deviations: 338804492.0
[2026-03-11 18:16:18] 2026-03-11 17:12:00,873 | INFO     | sum of deviations: 8442015212.000001
[2026-03-11 18:16:18] 2026-03-11 17:12:00,873 | INFO     | mean x: 1773245968.0
[2026-03-11 18:16:18] 2026-03-11 17:12:00,873 | INFO     | mean y: 2324609.330097087
[2026-03-11 18:16:18] 2026-03-11 17:12:00,873 | INFO     | intersect: -44181769137.79079
[2026-03-11 18:16:18] 2026-03-11 17:12:00,873 | INFO     | chi2: 1.1165728963644421
[2026-03-11 18:16:18] 2026-03-11 17:12:00,873 | INFO     | sum of square deviations: 291817564.5
[2026-03-11 18:16:18] 2026-03-11 17:12:00,873 | INFO     | sum of deviations: 8080737709.999998
[2026-03-11 18:16:18] 2026-03-11 17:12:00,873 | INFO     | mean x: 1773245815.5
[2026-03-11 18:16:18] 2026-03-11 17:12:00,873 | INFO     | mean y: 2323436.5918367347
[2026-03-11 18:16:18] 2026-03-11 17:12:00,873 | INFO     | intersect: -49100732971.14043
[2026-03-11 18:16:18] 2026-03-11 17:12:00,873 | INFO     | chi2: 1.1186033793896535
[2026-03-11 18:16:18] 2026-03-11 17:12:00,873 | INFO     | current chi2=1.1186033793896535 (change=-0.18184957129289156 %)
[2026-03-11 18:16:18] 2026-03-11 17:12:00,873 | INFO     | right removable region: 97
[2026-03-11 18:16:18] 2026-03-11 17:12:00,874 | INFO     | sum of square deviations: 291817564.5
[2026-03-11 18:16:18] 2026-03-11 17:12:00,874 | INFO     | sum of deviations: -1403666669.0000002
[2026-03-11 18:16:18] 2026-03-11 17:12:00,874 | INFO     | mean x: 1773246120.5
[2026-03-11 18:16:18] 2026-03-11 17:12:00,874 | INFO     | mean y: 2355544.224489796
[2026-03-11 18:16:18] 2026-03-11 17:12:00,874 | INFO     | intersect: 8531816337.799881
[2026-03-11 18:16:18] 2026-03-11 17:12:00,874 | INFO     | chi2: 0.0005350167909638978
[2026-03-11 18:16:18] 2026-03-11 17:12:00,874 | INFO     | current chi2=0.0005350167909638978 (change=99.9520840249028 %)
[2026-03-11 18:16:18] 2026-03-11 17:12:00,874 | INFO     | sum of square deviations: 249388862.0
[2026-03-11 18:16:18] 2026-03-11 17:12:00,874 | INFO     | sum of deviations: -1272402904.0000005
[2026-03-11 18:16:18] 2026-03-11 17:12:00,874 | INFO     | mean x: 1773246273.0
[2026-03-11 18:16:18] 2026-03-11 17:12:00,874 | INFO     | mean y: 2355062.3870967743
[2026-03-11 18:16:18] 2026-03-11 17:12:00,874 | INFO     | intersect: 9049606367.749634
[2026-03-11 18:16:18] 2026-03-11 17:12:00,874 | INFO     | chi2: 0.0004668755016692975
[2026-03-11 18:16:18] 2026-03-11 17:12:00,874 | INFO     | current chi2=0.0004668755016692975 (change=12.736289859582811 %)
[2026-03-11 18:16:18] 2026-03-11 17:12:00,875 | INFO     | left removable region: 20
[2026-03-11 18:16:18] 2026-03-11 17:12:00,875 | INFO     | sum of square deviations: 141539398.0
[2026-03-11 18:16:18] 2026-03-11 17:12:00,875 | INFO     | sum of deviations: -765978342.0000001
[2026-03-11 18:16:18] 2026-03-11 17:12:00,875 | INFO     | mean x: 1773246395.0
[2026-03-11 18:16:18] 2026-03-11 17:12:00,875 | INFO     | mean y: 2353773.5584415584
[2026-03-11 18:16:18] 2026-03-11 17:12:00,875 | INFO     | intersect: 9598751333.477251
[2026-03-11 18:16:18] 2026-03-11 17:12:00,875 | INFO     | chi2: 0.0003444389226059164
[2026-03-11 18:16:18] 2026-03-11 17:12:00,875 | INFO     | current memory leak: -5.41 B/s (using 77 data points, chi2=0.00)
[2026-03-11 18:16:18] 2026-03-11 17:12:00,875 | INFO     | could have reported an average CPU frequency of 3877 MHz (7 samples)
[2026-03-11 18:16:18] 2026-03-11 17:12:00,875 | INFO     | ..............................
[2026-03-11 18:16:18] 2026-03-11 17:12:00,875 | INFO     | . Timing measurements:
[2026-03-11 18:16:18] 2026-03-11 17:12:00,875 | INFO     | . get job = 0 s
[2026-03-11 18:16:18] 2026-03-11 17:12:00,875 | INFO     | . initial setup = 0 s
[2026-03-11 18:16:18] 2026-03-11 17:12:00,875 | INFO     | . payload setup = 5 s
[2026-03-11 18:16:18] 2026-03-11 17:12:00,875 | INFO     | . stage-in = 0 s
[2026-03-11 18:16:18] 2026-03-11 17:12:00,875 | INFO     | . payload execution = 6261 s
[2026-03-11 18:16:18] 2026-03-11 17:12:00,876 | INFO     | . stage-out = 0 s
[2026-03-11 18:16:18] 2026-03-11 17:12:00,876 | INFO     | . log creation = 0 s
[2026-03-11 18:16:18] 2026-03-11 17:12:00,876 | INFO     | ..............................
[2026-03-11 18:16:18] 2026-03-11 17:12:00,940 | INFO     | 
[2026-03-11 18:16:18] 2026-03-11 17:12:00,940 | INFO     | job summary report
[2026-03-11 18:16:18] 2026-03-11 17:12:00,940 | INFO     | --------------------------------------------------
[2026-03-11 18:16:18] 2026-03-11 17:12:00,940 | INFO     | PanDA job id: 7047975072
[2026-03-11 18:16:18] 2026-03-11 17:12:00,940 | INFO     | task id: 48958554
[2026-03-11 18:16:18] 2026-03-11 17:12:00,940 | INFO     | errors: (none)
[2026-03-11 18:16:18] 2026-03-11 17:12:00,940 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-11 18:16:18] 2026-03-11 17:12:00,940 | INFO     | pilot state: finished 
[2026-03-11 18:16:18] 2026-03-11 17:12:00,940 | INFO     | transexitcode: 0
[2026-03-11 18:16:18] 2026-03-11 17:12:00,940 | INFO     | exeerrorcode: 0
[2026-03-11 18:16:18] 2026-03-11 17:12:00,941 | INFO     | exeerrordiag: 
[2026-03-11 18:16:18] 2026-03-11 17:12:00,941 | INFO     | exitcode: 0
[2026-03-11 18:16:18] 2026-03-11 17:12:00,941 | INFO     | exitmsg: OK
[2026-03-11 18:16:18] 2026-03-11 17:12:00,941 | INFO     | cpuconsumptiontime: 24199 s
[2026-03-11 18:16:18] 2026-03-11 17:12:00,941 | INFO     | nevents: 400
[2026-03-11 18:16:18] 2026-03-11 17:12:00,941 | INFO     | neventsw: 0
[2026-03-11 18:16:18] 2026-03-11 17:12:00,941 | INFO     | pid: 1519012
[2026-03-11 18:16:18] 2026-03-11 17:12:00,941 | INFO     | pgrp: 1519012
[2026-03-11 18:16:18] 2026-03-11 17:12:00,941 | INFO     | corecount: 4
[2026-03-11 18:16:18] 2026-03-11 17:12:00,941 | INFO     | event service: False
[2026-03-11 18:16:18] 2026-03-11 17:12:00,941 | INFO     | sizes: {0: 2280184, 11: 2280184, 6269: 2307072, 6272: 2316092, 6273: 2316342}
[2026-03-11 18:16:18] 2026-03-11 17:12:00,941 | INFO     | --------------------------------------------------
[2026-03-11 18:16:18] 2026-03-11 17:12:00,941 | INFO     | 
[2026-03-11 18:16:18] 2026-03-11 17:12:00,941 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot88/slots/2
[2026-03-11 18:16:18] 2026-03-11 17:12:00,961 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-11 18:16:18] 2026-03-11 17:12:00,961 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-11 18:16:18] 2026-03-11 17:12:00,961 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-11 18:16:18] 2026-03-11 17:12:00,961 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-11 18:16:18] 2026-03-11 17:12:00,961 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-11 18:16:18] 2026-03-11 17:12:00,961 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-11 18:16:18] 2026-03-11 17:12:00,961 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-11 18:16:18] 2026-03-11 17:12:00,961 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-11 18:16:18] 2026-03-11 17:12:00,961 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-11 18:16:18] 2026-03-11 17:12:00,961 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-11 18:16:18] 2026-03-11 17:12:00,961 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-11 18:16:18] 2026-03-11 17:12:00,961 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-11 18:16:18] 2026-03-11 17:12:00,961 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-11 18:16:18] 2026-03-11 17:12:00,961 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-11 18:16:18] 2026-03-11 17:12:00,961 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-11 18:16:18] 2026-03-11 17:12:00,961 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-11 18:16:18] 2026-03-11 17:12:00,962 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-11 18:16:18] 2026-03-11 17:12:00,962 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-11 18:16:18] 2026-03-11 17:12:00,962 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-11 18:16:18] 2026-03-11 17:12:00,962 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-11 18:16:18] 2026-03-11 17:12:00,962 | INFO     | job 7047975072 has completed (purged errors)
[2026-03-11 18:16:18] 2026-03-11 17:12:00,962 | INFO     | overall cleanup function is called
[2026-03-11 18:16:18] 2026-03-11 17:12:01,282 | WARNING  | process 1519012 can no longer be monitored (due to stat problems) - aborting
[2026-03-11 18:16:18] 2026-03-11 17:12:01,656 | INFO     | using path: /var/lib/boinc/var/slot88/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-03-11 18:16:18] 2026-03-11 17:12:01,969 | INFO     | --- collectZombieJob: --- 10, [1519012]
[2026-03-11 18:16:18] 2026-03-11 17:12:01,970 | INFO     | zombie collector waiting for pid 1519012
[2026-03-11 18:16:18] 2026-03-11 17:12:01,970 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-11 18:16:18] 2026-03-11 17:12:01,970 | INFO     | collected zombie processes
[2026-03-11 18:16:18] 2026-03-11 17:12:01,970 | INFO     | will attempt to kill all subprocesses of pid=1519012
[2026-03-11 18:16:18] 2026-03-11 17:12:02,421 | INFO     | number of running child processes to parent process 1519012: 1
[2026-03-11 18:16:18] 2026-03-11 17:12:02,421 | INFO     | maximum number of monitored processes: 6
[2026-03-11 18:16:18] 2026-03-11 17:12:02,421 | INFO     | aborting job monitoring since job object (job id=7047975072) has expired
[2026-03-11 18:16:18] 2026-03-11 17:12:02,722 | INFO     | process IDs to be killed: [1519012] (in reverse order)
[2026-03-11 18:16:18] 2026-03-11 17:12:02,972 | WARNING  | found no corresponding commands to process id(s)
[2026-03-11 18:16:18] 2026-03-11 17:12:02,973 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-11 18:16:18] 2026-03-11 17:12:03,005 | INFO     | did not find any defunct processes belonging to 1519012
[2026-03-11 18:16:18] 2026-03-11 17:12:03,035 | INFO     | did not find any defunct processes belonging to 1519012
[2026-03-11 18:16:18] 2026-03-11 17:12:03,035 | INFO     | ready for new job
[2026-03-11 18:16:18] 2026-03-11 17:12:03,035 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-11 18:16:18] 2026-03-11 17:12:03,037 | INFO     | **************************************
[2026-03-11 18:16:18] 2026-03-11 17:12:03,041 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-11 18:16:18] 2026-03-11 17:12:03,041 | INFO     | **************************************
[2026-03-11 18:16:18] 2026-03-11 17:12:03,041 | INFO     | 
[2026-03-11 18:16:18] 2026-03-11 17:12:03,047 | INFO     | architecture information:
[2026-03-11 18:16:18] 2026-03-11 17:12:03,048 | INFO     | executing command: cat /etc/os-release
[2026-03-11 18:16:18] 2026-03-11 17:12:03,064 | INFO     | cat /etc/os-release:
[2026-03-11 18:16:18] NAME="CentOS Linux"
[2026-03-11 18:16:18] VERSION="7 (Core)"
[2026-03-11 18:16:18] ID="centos"
[2026-03-11 18:16:18] ID_LIKE="rhel fedora"
[2026-03-11 18:16:18] VERSION_ID="7"
[2026-03-11 18:16:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-11 18:16:18] ANSI_COLOR="0;31"
[2026-03-11 18:16:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-11 18:16:18] HOME_URL="https://www.centos.org/"
[2026-03-11 18:16:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-11 18:16:18] 
[2026-03-11 18:16:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-11 18:16:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-11 18:16:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-11 18:16:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-11 18:16:18] 
[2026-03-11 18:16:18] 2026-03-11 17:12:03,065 | INFO     | **************************************
[2026-03-11 18:16:18] 2026-03-11 17:12:03,567 | INFO     | executing command: df -mP /var/lib/boinc/var/slot88/slots/2
[2026-03-11 18:16:18] 2026-03-11 17:12:03,585 | INFO     | sufficient remaining disk space (32390512640 B)
[2026-03-11 18:16:18] 2026-03-11 17:12:03,586 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-11 18:16:18] 2026-03-11 17:12:03,586 | INFO     | current server update state: UPDATING_FINAL
[2026-03-11 18:16:18] 2026-03-11 17:12:03,586 | INFO     | update_server=False
[2026-03-11 18:16:18] 2026-03-11 17:12:03,586 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-11 18:16:18] 2026-03-11 17:12:03,586 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-11 18:16:18] 2026-03-11 17:12:03,586 | INFO     | aborting loop
[2026-03-11 18:16:18] 2026-03-11 17:12:03,586 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 18:16:18] 2026-03-11 17:12:03,961 | INFO     | all data control threads have been joined
[2026-03-11 18:16:18] 2026-03-11 17:12:04,311 | INFO     | all payload control threads have been joined
[2026-03-11 18:16:18] 2026-03-11 17:12:04,564 | INFO     | all job control threads have been joined
[2026-03-11 18:16:18] 2026-03-11 17:12:04,591 | INFO     | [job] retrieve thread has finished
[2026-03-11 18:16:18] 2026-03-11 17:12:04,591 | INFO     | [job] job monitor thread has finished
[2026-03-11 18:16:18] 2026-03-11 17:12:04,649 | INFO     | [payload] failed_post thread has finished
[2026-03-11 18:16:18] 2026-03-11 17:12:04,692 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 18:16:18] 2026-03-11 17:12:04,939 | INFO     | [job] validate thread has finished
[2026-03-11 18:16:18] 2026-03-11 17:12:04,966 | INFO     | [data] control thread has finished
[2026-03-11 18:16:18] 2026-03-11 17:12:05,082 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 18:16:18] 2026-03-11 17:12:05,158 | INFO     | [payload] validate_post thread has finished
[2026-03-11 18:16:18] 2026-03-11 17:12:05,260 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 18:16:18] 2026-03-11 17:12:05,269 | INFO     | [data] copytool_in thread has finished
[2026-03-11 18:16:18] 2026-03-11 17:12:05,316 | INFO     | [payload] control thread has finished
[2026-03-11 18:16:18] 2026-03-11 17:12:05,573 | INFO     | [job] control thread has finished
[2026-03-11 18:16:18] 2026-03-11 17:12:05,592 | INFO     | [data] copytool_out thread has finished
[2026-03-11 18:16:18] 2026-03-11 17:12:05,829 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 18:16:18] 2026-03-11 17:12:05,946 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 18:16:18] 2026-03-11 17:12:06,847 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 18:16:18] 2026-03-11 17:12:06,951 | INFO     | [job] queue monitor thread has finished
[2026-03-11 18:16:18] 2026-03-11 17:12:10,853 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 18:16:18] 2026-03-11 17:12:15,621 [wrapper] supervise_pilot (15 min periods counter: 8)
[2026-03-11 18:16:18] 2026-03-11 17:12:26,809 | INFO     | [monitor] cgroup control has ended
[2026-03-11 18:16:18] 2026-03-11 17:12:27,191 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22591477512000)>', '<ExcThread(monitor, started 22591246190336)>']
[2026-03-11 18:16:18] 2026-03-11 17:12:32,216 | INFO     | all workflow threads have been joined
[2026-03-11 18:16:18] 2026-03-11 17:12:32,216 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 18:16:18] 2026-03-11 17:12:32,216 | INFO     | traces error code: 0
[2026-03-11 18:16:18] 2026-03-11 17:12:32,216 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 18:16:18] 2026-03-11 17:12:32,836 | INFO     | PID=1490434 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-11 18:16:18] 2026-03-11 17:12:32,836 | INFO     | .. there are 46 such processes running
[2026-03-11 18:16:18] 2026-03-11 17:12:32,837 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 18:16:18] 2026-03-11 17:12:32,837 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 18:16:18] 2026-03-11 17:12:32,837 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 18:16:18] 2026-03-11 17:12:32,837 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 18:16:18] 2026-03-11 17:12:32,837 | INFO     | [monitor] control thread has ended
[2026-03-11 18:16:18] 2026-03-11 17:12:33,060 [wrapper] ==== pilot stdout END ====
[2026-03-11 18:16:18] 2026-03-11 17:12:33,063 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 18:16:18] 2026-03-11 17:12:33,066 [wrapper] pilotpid: 1490434
[2026-03-11 18:16:18] 2026-03-11 17:12:33,069 [wrapper] Pilot exit status: 0
[2026-03-11 18:16:18] 2026-03-11 17:12:33,127 [wrapper] pandaids: 7047975072 7047975072
[2026-03-11 18:16:18] 2026-03-11 17:12:33,305 [wrapper] cleanup supervisor_pilot 2338298 1490435
[2026-03-11 18:16:18] 2026-03-11 17:12:33,308 [wrapper] Test setup, not cleaning
[2026-03-11 18:16:18] 2026-03-11 17:12:33,328 [wrapper] apfmon messages muted
[2026-03-11 18:16:18] 2026-03-11 17:12:33,338 [wrapper] ==== wrapper stdout END ====
[2026-03-11 18:16:18] 2026-03-11 17:12:33,347 [wrapper] ==== wrapper stderr END ====
[2026-03-11 18:16:18]  *** Error codes and diagnostics ***
[2026-03-11 18:16:18]     "exeErrorCode": 0,
[2026-03-11 18:16:18]     "exeErrorDiag": "",
[2026-03-11 18:16:18]     "pilotErrorCode": 0,
[2026-03-11 18:16:18]     "pilotErrorDiag": "",
[2026-03-11 18:16:18]  *** Listing of results directory ***
[2026-03-11 18:16:18] total 748308
[2026-03-11 18:16:18] drwx------. 5 boinc boinc      4096 Feb  2 16:00 pilot3
[2026-03-11 18:16:18] -rw-r--r--. 1 boinc boinc    584627 Mar 10 01:18 pilot3.tar.gz
[2026-03-11 18:16:18] -rw-r--r--. 1 boinc boinc      5111 Mar 10 01:51 queuedata.json
[2026-03-11 18:16:18] -rwx------. 1 boinc boinc     36322 Mar 10 01:52 runpilot2-wrapper.sh
[2026-03-11 18:16:18] -rw-r--r--. 1 boinc boinc       100 Mar 11 14:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 18:16:18] -rwxr-xr-x. 1 boinc boinc      7986 Mar 11 14:32 run_atlas
[2026-03-11 18:16:18] -rw-r--r--. 1 boinc boinc       105 Mar 11 14:32 job.xml
[2026-03-11 18:16:18] -rw-r--r--. 3 boinc boinc 277318121 Mar 11 14:32 EVNT.48958551._000139.pool.root.1
[2026-03-11 18:16:18] -rw-r--r--. 3 boinc boinc 277318121 Mar 11 14:32 ATLAS.root_0
[2026-03-11 18:16:18] -rw-r--r--. 2 boinc boinc     15845 Mar 11 14:32 start_atlas.sh
[2026-03-11 18:16:18] drwxrwx--x. 2 boinc boinc      4096 Mar 11 14:32 shared
[2026-03-11 18:16:18] -rw-r--r--. 2 boinc boinc    597957 Mar 11 14:32 input.tar.gz
[2026-03-11 18:16:18] -rw-r--r--. 1 boinc boinc         0 Mar 11 14:32 boinc_lockfile
[2026-03-11 18:16:18] -rw-r--r--. 1 boinc boinc      6713 Mar 11 16:27 init_data.xml
[2026-03-11 18:16:18] -rw-r--r--. 1 boinc boinc      2518 Mar 11 16:27 pandaJob.out
[2026-03-11 18:16:18] -rw-------. 1 boinc boinc   1006251 Mar 11 16:27 agis_schedconf.cvmfs.json
[2026-03-11 18:16:18] -rw-------. 1 boinc boinc       444 Mar 11 16:27 workernode_map.json
[2026-03-11 18:16:18] -rw-------. 1 boinc boinc 205290920 Mar 11 18:11 HITS.48958554._003527.pool.root.1
[2026-03-11 18:16:18] -rw-r--r--. 1 boinc boinc       530 Mar 11 18:11 boinc_task_state.xml
[2026-03-11 18:16:18] -rw-------. 1 boinc boinc      1030 Mar 11 18:11 memory_monitor_summary.json
[2026-03-11 18:16:18] -rw-------. 1 boinc boinc   1511578 Mar 11 18:11 agis_ddmendpoints.agis.ALL.json
[2026-03-11 18:16:18] -rw-------. 1 boinc boinc    303521 Mar 11 18:11 log.48958554._003527.job.log.tgz.1
[2026-03-11 18:16:18] -rw-------. 1 boinc boinc      6353 Mar 11 18:12 heartbeat.json
[2026-03-11 18:16:18] -rw-------. 1 boinc boinc       823 Mar 11 18:12 pilotlog.txt
[2026-03-11 18:16:18] -rw-------. 1 boinc boinc        97 Mar 11 18:12 pilot_heartbeat.json
[2026-03-11 18:16:18] -rw-------. 1 boinc boinc    904275 Mar 11 18:12 log.48958554._003527.job.log.1
[2026-03-11 18:16:18] -rw-------. 1 boinc boinc       357 Mar 11 18:12 output.list
[2026-03-11 18:16:18] -rw-r--r--. 1 boinc boinc       620 Mar 11 18:12 runtime_log
[2026-03-11 18:16:18] -rw-------. 1 boinc boinc   1228800 Mar 11 18:12 result.tar.gz
[2026-03-11 18:16:18] -rw-------. 1 boinc boinc       786 Mar 11 18:12 yXUMDmGW0J9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmNKeLDmtL1cJm.diag
[2026-03-11 18:16:18] -rw-r--r--. 1 boinc boinc      9281 Mar 11 18:12 runtime_log.err
[2026-03-11 18:16:18] -rw-r--r--. 1 boinc boinc        27 Mar 11 18:15 wrapper_checkpoint.txt
[2026-03-11 18:16:18] -rw-r--r--. 1 boinc boinc      8192 Mar 11 18:16 boinc_mmap_file
[2026-03-11 18:16:18] -rw-r--r--. 1 boinc boinc      4146 Mar 11 18:16 stderr.txt
[2026-03-11 18:16:18] HITS file was successfully produced:
[2026-03-11 18:16:18] -rw-------. 1 boinc boinc 205290920 Mar 11 18:11 shared/HITS.pool.root.1
[2026-03-11 18:16:18]  *** Contents of shared directory: ***
[2026-03-11 18:16:18] total 473108
[2026-03-11 18:16:18] -rw-r--r--. 3 boinc boinc 277318121 Mar 11 14:32 ATLAS.root_0
[2026-03-11 18:16:18] -rw-r--r--. 2 boinc boinc     15845 Mar 11 14:32 start_atlas.sh
[2026-03-11 18:16:18] -rw-r--r--. 2 boinc boinc    597957 Mar 11 14:32 input.tar.gz
[2026-03-11 18:16:18] -rw-------. 1 boinc boinc 205290920 Mar 11 18:11 HITS.pool.root.1
[2026-03-11 18:16:18] -rw-------. 1 boinc boinc   1228800 Mar 11 18:12 result.tar.gz
18:16:19 (1484634): run_atlas exited; CPU time 24478.443451
18:16:19 (1484634): called boinc_finish(0)

</stderr_txt>
]]>

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