Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:17:39 (3910390): wrapper (7.7.26015): starting
14:17:39 (3910390): wrapper: running run_atlas (--nthreads 11)
[2026-03-10 14:17:39] Arguments: --nthreads 11
[2026-03-10 14:17:39] Threads: 11
[2026-03-10 14:17:39] Checking for CVMFS
[2026-03-10 14:17:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-10 14:17:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-10 14:17:40] Running cvmfs_config stat atlas.cern.ch
[2026-03-10 14:18:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-10 14:18:00] 2.13.3.0 7100 180096 258524 157126 1 248 31062050 40960001 74102 16776704 0 1979047271 99.734 1378066612 47025 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-10 14:18:00] CVMFS is ok
[2026-03-10 14:18:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 14:18:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 14:18:00] Further information can be found at the LHC@home message board.
[2026-03-10 14:18:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 14:18:00] Checking for apptainer binary...
[2026-03-10 14:18:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-10 14:18:00] Running /usr/bin/apptainer --version
[2026-03-10 14:18:00] apptainer version 1.4.5-2.el9
[2026-03-10 14:18:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 14:18:01] c8-6-10.aglt2.org
[2026-03-10 14:18:01] apptainer works
[2026-03-10 14:18:01] Set ATHENA_PROC_NUMBER=11
[2026-03-10 14:18:01] Set ATHENA_CORE_NUMBER=11
[2026-03-10 14:18:01] Starting ATLAS job with PandaID=7036000438
[2026-03-10 14:18:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 18:01:11]  *** The last 200 lines of the pilot log: ***
[2026-03-10 18:01:11] 2026-03-10 22:00:03,795 | INFO     | sum of square deviations: 2871698373.1238146
[2026-03-10 18:01:11] 2026-03-10 22:00:03,796 | INFO     | sum of deviations: 67411923490.45717
[2026-03-10 18:01:11] 2026-03-10 22:00:03,796 | INFO     | mean x: 1773173296.7523808
[2026-03-10 18:01:11] 2026-03-10 22:00:03,796 | INFO     | mean y: 2575904.0857142857
[2026-03-10 18:01:11] 2026-03-10 22:00:03,796 | INFO     | intersect: -41621928861.0042
[2026-03-10 18:01:11] 2026-03-10 22:00:03,796 | INFO     | chi2: 4.296581659950344
[2026-03-10 18:01:11] 2026-03-10 22:00:03,796 | INFO     | current chi2=4.296581659950344 (change=14.89684870269773 %)
[2026-03-10 18:01:11] 2026-03-10 22:00:03,796 | INFO     | right removable region: 209
[2026-03-10 18:01:11] 2026-03-10 22:00:03,797 | INFO     | sum of square deviations: 2871666043.1238146
[2026-03-10 18:01:11] 2026-03-10 22:00:03,801 | INFO     | sum of deviations: -15119493450.104761
[2026-03-10 18:01:11] 2026-03-10 22:00:03,801 | INFO     | mean x: 1773173601.7523808
[2026-03-10 18:01:11] 2026-03-10 22:00:03,801 | INFO     | mean y: 2615995.7095238096
[2026-03-10 18:01:11] 2026-03-10 22:00:03,801 | INFO     | intersect: 9338481049.304085
[2026-03-10 18:01:11] 2026-03-10 22:00:03,801 | INFO     | chi2: 1.3676992254635905
[2026-03-10 18:01:11] 2026-03-10 22:00:03,801 | INFO     | current chi2=1.3676992254635905 (change=72.9097400385086 %)
[2026-03-10 18:01:11] 2026-03-10 22:00:03,801 | INFO     | sum of square deviations: 2671401974.3122
[2026-03-10 18:01:11] 2026-03-10 22:00:03,802 | INFO     | sum of deviations: -34625761494.02927
[2026-03-10 18:01:11] 2026-03-10 22:00:03,802 | INFO     | mean x: 1773173754.2487805
[2026-03-10 18:01:11] 2026-03-10 22:00:03,802 | INFO     | mean y: 2630711.882926829
[2026-03-10 18:01:11] 2026-03-10 22:00:03,802 | INFO     | intersect: 22985877745.642647
[2026-03-10 18:01:11] 2026-03-10 22:00:03,802 | INFO     | chi2: 0.8960491298824454
[2026-03-10 18:01:11] 2026-03-10 22:00:03,802 | INFO     | current chi2=0.8960491298824454 (change=34.48492817719306 %)
[2026-03-10 18:01:11] 2026-03-10 22:00:03,802 | INFO     | sum of square deviations: 2480647958.995003
[2026-03-10 18:01:11] 2026-03-10 22:00:03,803 | INFO     | sum of deviations: -37231904172.765
[2026-03-10 18:01:11] 2026-03-10 22:00:03,803 | INFO     | mean x: 1773173906.755
[2026-03-10 18:01:11] 2026-03-10 22:00:03,803 | INFO     | mean y: 2632765.515
[2026-03-10 18:01:11] 2026-03-10 22:00:03,803 | INFO     | intersect: 26616099113.515446
[2026-03-10 18:01:11] 2026-03-10 22:00:03,803 | INFO     | chi2: 0.8711932407510592
[2026-03-10 18:01:11] 2026-03-10 22:00:03,803 | INFO     | current chi2=0.8711932407510592 (change=2.773942667032906 %)
[2026-03-10 18:01:11] 2026-03-10 22:00:03,803 | INFO     | left removable region: 30
[2026-03-10 18:01:11] 2026-03-10 22:00:03,803 | INFO     | sum of square deviations: 1778394057.5865946
[2026-03-10 18:01:11] 2026-03-10 22:00:03,805 | INFO     | sum of deviations: -12651028364.033518
[2026-03-10 18:01:11] 2026-03-10 22:00:03,805 | INFO     | mean x: 1773174181.273743
[2026-03-10 18:01:11] 2026-03-10 22:00:03,805 | INFO     | mean y: 2635945.184357542
[2026-03-10 18:01:11] 2026-03-10 22:00:03,805 | INFO     | intersect: 12616531479.736736
[2026-03-10 18:01:11] 2026-03-10 22:00:03,805 | INFO     | chi2: 0.05109430440794703
[2026-03-10 18:01:11] 2026-03-10 22:00:03,806 | INFO     | current memory leak: -7.11 B/s (using 179 data points, chi2=0.05)
[2026-03-10 18:01:11] 2026-03-10 22:00:03,806 | INFO     | could have reported an average CPU frequency of 3799 MHz (11 samples)
[2026-03-10 18:01:11] 2026-03-10 22:00:03,806 | INFO     | ..............................
[2026-03-10 18:01:11] 2026-03-10 22:00:03,806 | INFO     | . Timing measurements:
[2026-03-10 18:01:11] 2026-03-10 22:00:03,806 | INFO     | . get job = 0 s
[2026-03-10 18:01:11] 2026-03-10 22:00:03,806 | INFO     | . initial setup = 44 s
[2026-03-10 18:01:11] 2026-03-10 22:00:03,806 | INFO     | . payload setup = 54 s
[2026-03-10 18:01:11] 2026-03-10 22:00:03,806 | INFO     | . stage-in = 0 s
[2026-03-10 18:01:11] 2026-03-10 22:00:03,806 | INFO     | . payload execution = 13107 s
[2026-03-10 18:01:11] 2026-03-10 22:00:03,806 | INFO     | . stage-out = 7 s
[2026-03-10 18:01:11] 2026-03-10 22:00:03,806 | INFO     | . log creation = 2 s
[2026-03-10 18:01:11] 2026-03-10 22:00:03,806 | INFO     | ..............................
[2026-03-10 18:01:11] 2026-03-10 22:00:03,899 | INFO     | 
[2026-03-10 18:01:11] 2026-03-10 22:00:03,899 | INFO     | job summary report
[2026-03-10 18:01:11] 2026-03-10 22:00:03,899 | INFO     | --------------------------------------------------
[2026-03-10 18:01:11] 2026-03-10 22:00:03,900 | INFO     | PanDA job id: 7036000438
[2026-03-10 18:01:11] 2026-03-10 22:00:03,900 | INFO     | task id: 48847157
[2026-03-10 18:01:11] 2026-03-10 22:00:03,900 | INFO     | errors: (none)
[2026-03-10 18:01:11] 2026-03-10 22:00:03,900 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 18:01:11] 2026-03-10 22:00:03,900 | INFO     | pilot state: finished 
[2026-03-10 18:01:11] 2026-03-10 22:00:03,900 | INFO     | transexitcode: 0
[2026-03-10 18:01:11] 2026-03-10 22:00:03,900 | INFO     | exeerrorcode: 0
[2026-03-10 18:01:11] 2026-03-10 22:00:03,900 | INFO     | exeerrordiag: 
[2026-03-10 18:01:11] 2026-03-10 22:00:03,900 | INFO     | exitcode: 0
[2026-03-10 18:01:11] 2026-03-10 22:00:03,900 | INFO     | exitmsg: OK
[2026-03-10 18:01:11] 2026-03-10 22:00:03,900 | INFO     | cpuconsumptiontime: 56815 s
[2026-03-10 18:01:11] 2026-03-10 22:00:03,900 | INFO     | nevents: 400
[2026-03-10 18:01:11] 2026-03-10 22:00:03,900 | INFO     | neventsw: 0
[2026-03-10 18:01:11] 2026-03-10 22:00:03,900 | INFO     | pid: 3966692
[2026-03-10 18:01:11] 2026-03-10 22:00:03,900 | INFO     | pgrp: 3966692
[2026-03-10 18:01:11] 2026-03-10 22:00:03,900 | INFO     | corecount: 11
[2026-03-10 18:01:11] 2026-03-10 22:00:03,900 | INFO     | event service: False
[2026-03-10 18:01:11] 2026-03-10 22:00:03,900 | INFO     | sizes: {0: 2279853, 1: 2269044, 2: 2280314, 12: 2280342, 13164: 2310388, 13165: 2310387, 13173: 2319569, 13175: 2319819}
[2026-03-10 18:01:11] 2026-03-10 22:00:03,900 | INFO     | --------------------------------------------------
[2026-03-10 18:01:11] 2026-03-10 22:00:03,900 | INFO     | 
[2026-03-10 18:01:11] 2026-03-10 22:00:03,900 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-03-10 18:01:11] 2026-03-10 22:00:03,926 | WARNING  | process 3966692 can no longer be monitored (due to stat problems) - aborting
[2026-03-10 18:01:11] 2026-03-10 22:00:03,927 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-7036000438/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 18:01:11] 2026-03-10 22:00:03,927 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-7036000438/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 18:01:11] 2026-03-10 22:00:03,928 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-10 18:01:11] 2026-03-10 22:00:03,928 | WARNING  | maxPSS not found in memory monitor output
[2026-03-10 18:01:11] 2026-03-10 22:00:03,928 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4294941 B
[2026-03-10 18:01:11] 2026-03-10 22:00:03,928 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16789 B
[2026-03-10 18:01:11] 2026-03-10 22:00:03,928 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-03-10 18:01:11] 2026-03-10 22:00:04,123 | INFO     | sufficient remaining disk space (166986776576 B)
[2026-03-10 18:01:11] 2026-03-10 22:00:04,123 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-03-10 18:01:11] 2026-03-10 22:00:04,128 | INFO     | size of work directory /tmp/boinchome/slots/4/PanDA_Pilot-7036000438: 4656774 B (within 5033164800 B limit)
[2026-03-10 18:01:11] 2026-03-10 22:00:04,128 | INFO     | pfn file=/tmp/boinchome/slots/4/PanDA_Pilot-7036000438/HITS.48847157._000071.pool.root.1 does not exist (skip from workdir size calculation)
[2026-03-10 18:01:11] 2026-03-10 22:00:04,128 | INFO     | total size of present files: 0 B (workdir size: 4656774 B)
[2026-03-10 18:01:11] 2026-03-10 22:00:04,128 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/4/PanDA_Pilot-7036000438/HITS.48847157._000071.pool.root.1 since it does not exist
[2026-03-10 18:01:11] 2026-03-10 22:00:04,176 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 18:01:11] 2026-03-10 22:00:04,176 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 18:01:11] 2026-03-10 22:00:04,176 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 18:01:11] 2026-03-10 22:00:04,176 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 18:01:11] 2026-03-10 22:00:04,176 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 18:01:11] 2026-03-10 22:00:04,176 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 18:01:11] 2026-03-10 22:00:04,176 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 18:01:11] 2026-03-10 22:00:04,176 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 18:01:11] 2026-03-10 22:00:04,177 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 18:01:11] 2026-03-10 22:00:04,177 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 18:01:11] 2026-03-10 22:00:04,177 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 18:01:11] 2026-03-10 22:00:04,177 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 18:01:11] 2026-03-10 22:00:04,177 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 18:01:11] 2026-03-10 22:00:04,177 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 18:01:11] 2026-03-10 22:00:04,177 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 18:01:11] 2026-03-10 22:00:04,177 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 18:01:11] 2026-03-10 22:00:04,177 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 18:01:11] 2026-03-10 22:00:04,177 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 18:01:11] 2026-03-10 22:00:04,177 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 18:01:11] 2026-03-10 22:00:04,177 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 18:01:11] 2026-03-10 22:00:04,177 | INFO     | job 7036000438 has completed (purged errors)
[2026-03-10 18:01:11] 2026-03-10 22:00:04,177 | INFO     | overall cleanup function is called
[2026-03-10 18:01:11] 2026-03-10 22:00:05,193 | INFO     | --- collectZombieJob: --- 10, [3966692]
[2026-03-10 18:01:11] 2026-03-10 22:00:05,193 | INFO     | zombie collector waiting for pid 3966692
[2026-03-10 18:01:11] 2026-03-10 22:00:05,193 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 18:01:11] 2026-03-10 22:00:05,193 | INFO     | collected zombie processes
[2026-03-10 18:01:11] 2026-03-10 22:00:05,193 | INFO     | will attempt to kill all subprocesses of pid=3966692
[2026-03-10 18:01:11] 2026-03-10 22:00:07,709 | INFO     | number of running child processes to parent process 3966692: 1
[2026-03-10 18:01:11] 2026-03-10 22:00:07,709 | INFO     | maximum number of monitored processes: 7
[2026-03-10 18:01:11] 2026-03-10 22:00:07,709 | INFO     | aborting job monitoring since job object (job id=7036000438) has expired
[2026-03-10 18:01:11] 2026-03-10 22:00:09,230 | INFO     | process IDs to be killed: [3966692] (in reverse order)
[2026-03-10 18:01:11] 2026-03-10 22:00:09,647 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 18:01:11] 2026-03-10 22:00:09,648 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 18:01:11] 2026-03-10 22:00:09,804 | INFO     | did not find any defunct processes belonging to 3966692
[2026-03-10 18:01:11] 2026-03-10 22:00:09,884 | INFO     | did not find any defunct processes belonging to 3966692
[2026-03-10 18:01:11] 2026-03-10 22:00:09,884 | INFO     | ready for new job
[2026-03-10 18:01:11] 2026-03-10 22:00:09,884 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 18:01:11] 2026-03-10 22:00:09,904 | INFO     | **************************************
[2026-03-10 18:01:11] 2026-03-10 22:00:09,904 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 18:01:11] 2026-03-10 22:00:09,904 | INFO     | **************************************
[2026-03-10 18:01:11] 2026-03-10 22:00:09,904 | INFO     | 
[2026-03-10 18:01:11] 2026-03-10 22:00:09,912 | INFO     | architecture information:
[2026-03-10 18:01:11] 2026-03-10 22:00:09,914 | INFO     | executing command: cat /etc/os-release
[2026-03-10 18:01:11] 2026-03-10 22:00:09,980 | INFO     | cat /etc/os-release:
[2026-03-10 18:01:11] NAME="CentOS Linux"
[2026-03-10 18:01:11] VERSION="7 (Core)"
[2026-03-10 18:01:11] ID="centos"
[2026-03-10 18:01:11] ID_LIKE="rhel fedora"
[2026-03-10 18:01:11] VERSION_ID="7"
[2026-03-10 18:01:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 18:01:11] ANSI_COLOR="0;31"
[2026-03-10 18:01:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 18:01:11] HOME_URL="https://www.centos.org/"
[2026-03-10 18:01:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 18:01:11] 
[2026-03-10 18:01:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 18:01:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 18:01:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 18:01:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 18:01:11] 
[2026-03-10 18:01:11] 2026-03-10 22:00:09,980 | INFO     | **************************************
[2026-03-10 18:01:11] 2026-03-10 22:00:10,484 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-03-10 18:01:11] 2026-03-10 22:00:10,534 | INFO     | sufficient remaining disk space (166992019456 B)
[2026-03-10 18:01:11] 2026-03-10 22:00:10,535 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 18:01:11] 2026-03-10 22:00:10,537 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 18:01:11] 2026-03-10 22:00:10,537 | INFO     | update_server=False
[2026-03-10 18:01:11] 2026-03-10 22:00:10,537 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 18:01:11] 2026-03-10 22:00:10,537 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 18:01:11] 2026-03-10 22:00:10,537 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 18:01:11] 2026-03-10 22:00:10,576 | INFO     | all job control threads have been joined
[2026-03-10 18:01:11] 2026-03-10 22:00:11,122 | INFO     | all payload control threads have been joined
[2026-03-10 18:01:11] 2026-03-10 22:00:11,161 | INFO     | all data control threads have been joined
[2026-03-10 18:01:11] 2026-03-10 22:00:11,250 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 18:01:11] 2026-03-10 22:00:11,250 | INFO     | aborting loop
[2026-03-10 18:01:11] 2026-03-10 22:00:11,550 | INFO     | [job] retrieve thread has finished
[2026-03-10 18:01:11] 2026-03-10 22:00:11,586 | INFO     | [job] control thread has finished
[2026-03-10 18:01:11] 2026-03-10 22:00:11,609 | INFO     | [payload] validate_post thread has finished
[2026-03-10 18:01:11] 2026-03-10 22:00:12,142 | INFO     | [payload] control thread has finished
[2026-03-10 18:01:11] 2026-03-10 22:00:12,167 | INFO     | [data] control thread has finished
[2026-03-10 18:01:11] 2026-03-10 22:00:12,256 | INFO     | [job] job monitor thread has finished
[2026-03-10 18:01:11] 2026-03-10 22:00:12,317 | INFO     | [payload] failed_post thread has finished
[2026-03-10 18:01:11] 2026-03-10 22:00:12,555 | INFO     | [data] copytool_out thread has finished
[2026-03-10 18:01:11] 2026-03-10 22:00:12,587 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 18:01:11] 2026-03-10 22:00:13,005 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 18:01:11] 2026-03-10 22:00:13,014 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 18:01:11] 2026-03-10 22:00:13,099 | INFO     | [job] validate thread has finished
[2026-03-10 18:01:11] 2026-03-10 22:00:13,099 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 18:01:11] 2026-03-10 22:00:13,099 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 18:01:11] 2026-03-10 22:00:13,100 | INFO     | [data] copytool_in thread has finished
[2026-03-10 18:01:11] 2026-03-10 22:00:14,011 | INFO     | [job] queue monitor thread has finished
[2026-03-10 18:01:11] 2026-03-10 22:00:14,561 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 18:01:11] 2026-03-10 22:00:40,805 | INFO     | [monitor] cgroup control has ended
[2026-03-10 18:01:11] 2026-03-10 22:00:42,486 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140084439529280)>', '<ExcThread(monitor, started 140083537618688)>']
[2026-03-10 18:01:11] 2026-03-10 22:00:42,890 | INFO     | PID=3939957 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 18:01:11] 2026-03-10 22:00:42,890 | INFO     | .. there are 102 such processes running
[2026-03-10 18:01:11] 2026-03-10 22:00:42,900 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 18:01:11] 2026-03-10 22:00:42,900 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 18:01:11] 2026-03-10 22:00:42,900 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 18:01:11] 2026-03-10 22:00:42,900 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 18:01:11] 2026-03-10 22:00:42,900 | INFO     | [monitor] control thread has ended
[2026-03-10 18:01:11] 2026-03-10 22:00:47,512 | INFO     | all workflow threads have been joined
[2026-03-10 18:01:11] 2026-03-10 22:00:47,512 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 18:01:11] 2026-03-10 22:00:47,516 | INFO     | traces error code: 0
[2026-03-10 18:01:11] 2026-03-10 22:00:47,516 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 18:01:11] 2026-03-10 22:00:49,611 [wrapper] ==== pilot stdout END ====
[2026-03-10 18:01:11] 2026-03-10 22:00:49,645 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 18:01:11] 2026-03-10 22:00:49,717 [wrapper] pilotpid: 3939957
[2026-03-10 18:01:11] 2026-03-10 22:00:49,743 [wrapper] Pilot exit status: 0
[2026-03-10 18:01:11] 2026-03-10 22:00:50,075 [wrapper] pandaids: 7036000438
[2026-03-10 18:01:11] 2026-03-10 22:00:50,702 [wrapper] cleanup supervisor_pilot 2153375 3939958
[2026-03-10 18:01:11] 2026-03-10 22:00:50,713 [wrapper] Test setup, not cleaning
[2026-03-10 18:01:11] 2026-03-10 22:00:50,728 [wrapper] apfmon messages muted
[2026-03-10 18:01:11] 2026-03-10 22:00:50,736 [wrapper] ==== wrapper stdout END ====
[2026-03-10 18:01:11] 2026-03-10 22:00:50,752 [wrapper] ==== wrapper stderr END ====
[2026-03-10 18:01:11]  *** Error codes and diagnostics ***
[2026-03-10 18:01:11]     "exeErrorCode": 0,
[2026-03-10 18:01:11]     "exeErrorDiag": "",
[2026-03-10 18:01:11]     "pilotErrorCode": 0,
[2026-03-10 18:01:11]     "pilotErrorDiag": "",
[2026-03-10 18:01:11]  *** Listing of results directory ***
[2026-03-10 18:01:11] total 409256
[2026-03-10 18:01:11] -rw-r--r--. 1 boincer umatlas      5111 Mar  2 08:57 queuedata.json
[2026-03-10 18:01:11] -rw-r--r--. 1 boincer umatlas    584627 Mar  2 08:57 pilot3.tar.gz
[2026-03-10 18:01:11] -rwx------. 1 boincer umatlas     36322 Mar  2 08:57 runpilot2-wrapper.sh
[2026-03-10 18:01:11] -rw-r--r--. 1 boincer umatlas       100 Mar 10 14:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 18:01:11] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 10 14:17 run_atlas
[2026-03-10 18:01:11] -rw-r--r--. 1 boincer umatlas       105 Mar 10 14:17 job.xml
[2026-03-10 18:01:11] -rw-r--r--. 2 boincer umatlas 209592254 Mar 10 14:17 EVNT.48453086._000003.pool.root.1
[2026-03-10 18:01:11] drwxrwx--x. 2 boincer umatlas      4096 Mar 10 14:17 shared
[2026-03-10 18:01:11] -rw-r--r--. 2 boincer umatlas    597956 Mar 10 14:17 input.tar.gz
[2026-03-10 18:01:11] -rw-r--r--. 2 boincer umatlas     15845 Mar 10 14:17 start_atlas.sh
[2026-03-10 18:01:11] -rw-r--r--. 1 boincer umatlas         0 Mar 10 14:17 boinc_lockfile
[2026-03-10 18:01:11] -rw-r--r--. 1 boincer umatlas      2599 Mar 10 14:18 pandaJob.out
[2026-03-10 18:01:11] -rw-------. 1 boincer umatlas        57 Mar 10 14:18 setup.sh.local
[2026-03-10 18:01:11] -rw-------. 1 boincer umatlas   1006644 Mar 10 14:19 agis_schedconf.cvmfs.json
[2026-03-10 18:01:11] -rw-------. 1 boincer umatlas       430 Mar 10 14:20 workernode_map.json
[2026-03-10 18:01:11] drwx------. 5 boincer umatlas      4096 Mar 10 14:20 pilot3
[2026-03-10 18:01:11] -rw-------. 1 boincer umatlas 201565061 Mar 10 17:58 HITS.48847157._000071.pool.root.1
[2026-03-10 18:01:11] -rw-r--r--. 1 boincer umatlas       530 Mar 10 17:58 boinc_task_state.xml
[2026-03-10 18:01:11] -rw-------. 1 boincer umatlas      1061 Mar 10 17:59 memory_monitor_summary.json
[2026-03-10 18:01:11] -rw-------. 1 boincer umatlas   1511578 Mar 10 17:59 agis_ddmendpoints.agis.ALL.json
[2026-03-10 18:01:11] -rw-------. 1 boincer umatlas    480845 Mar 10 18:00 log.48847157._000071.job.log.tgz.1
[2026-03-10 18:01:11] -rw-------. 1 boincer umatlas      6370 Mar 10 18:00 heartbeat.json
[2026-03-10 18:01:11] -rw-r--r--. 1 boincer umatlas      7172 Mar 10 18:00 init_data.xml
[2026-03-10 18:01:11] -rw-------. 1 boincer umatlas        95 Mar 10 18:00 pilot_heartbeat.json
[2026-03-10 18:01:11] -rw-------. 1 boincer umatlas      4822 Mar 10 18:00 pilotlog.txt
[2026-03-10 18:01:11] -rw-------. 1 boincer umatlas   1512386 Mar 10 18:00 log.48847157._000071.job.log.1
[2026-03-10 18:01:11] -rw-------. 1 boincer umatlas       357 Mar 10 18:00 output.list
[2026-03-10 18:01:11] -rw-r--r--. 1 boincer umatlas       620 Mar 10 18:00 runtime_log
[2026-03-10 18:01:11] -rw-------. 1 boincer umatlas   2007040 Mar 10 18:00 result.tar.gz
[2026-03-10 18:01:11] -rw-------. 1 boincer umatlas       660 Mar 10 18:00 sPZLDmixIH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmQVDLDmh5T3Zm.diag
[2026-03-10 18:01:11] -rw-r--r--. 1 boincer umatlas      9339 Mar 10 18:00 runtime_log.err
[2026-03-10 18:01:11] -rw-r--r--. 1 boincer umatlas      8192 Mar 10 18:01 boinc_mmap_file
[2026-03-10 18:01:11] -rw-r--r--. 1 boincer umatlas        28 Mar 10 18:01 wrapper_checkpoint.txt
[2026-03-10 18:01:11] -rw-r--r--. 1 boincer umatlas     21752 Mar 10 18:01 stderr.txt
[2026-03-10 18:01:12] HITS file was successfully produced:
[2026-03-10 18:01:12] -rw-------. 1 boincer umatlas 201565061 Mar 10 17:58 shared/HITS.pool.root.1
[2026-03-10 18:01:12]  *** Contents of shared directory: ***
[2026-03-10 18:01:12] total 404088
[2026-03-10 18:01:12] -rw-r--r--. 2 boincer umatlas 209592254 Mar 10 14:17 ATLAS.root_0
[2026-03-10 18:01:12] -rw-r--r--. 2 boincer umatlas    597956 Mar 10 14:17 input.tar.gz
[2026-03-10 18:01:12] -rw-r--r--. 2 boincer umatlas     15845 Mar 10 14:17 start_atlas.sh
[2026-03-10 18:01:12] -rw-------. 1 boincer umatlas 201565061 Mar 10 17:58 HITS.pool.root.1
[2026-03-10 18:01:12] -rw-------. 1 boincer umatlas   2007040 Mar 10 18:00 result.tar.gz
18:01:13 (3910390): run_atlas exited; CPU time 57389.946896
18:01:13 (3910390): called boinc_finish(0)

</stderr_txt>
]]>

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