Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:11:17 (794389): wrapper (7.7.26015): starting
23:11:17 (794389): wrapper: running run_atlas (--nthreads 4)
[2026-03-11 23:11:17] Arguments: --nthreads 4
[2026-03-11 23:11:17] Threads: 4
[2026-03-11 23:11:17] Checking for CVMFS
[2026-03-11 23:11:17] No cvmfs_config command found, will try listing directly
[2026-03-11 23:11:17] CVMFS is ok
[2026-03-11 23:11:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 23:11:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-11 23:11:17] Further information can be found at the LHC@home message board.
[2026-03-11 23:11:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 23:11:17] Checking for apptainer binary...
[2026-03-11 23:11:17] which: no apptainer in ((null))
[2026-03-11 23:11:17] apptainer is not installed, using version from CVMFS
[2026-03-11 23:11:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 23:11:17] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot224/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut18.grid.cesnet.cz
[2026-03-11 23:11:17] apptainer works
[2026-03-11 23:11:17] Set ATHENA_PROC_NUMBER=4
[2026-03-11 23:11:17] Set ATHENA_CORE_NUMBER=4
[2026-03-11 23:11:17] Starting ATLAS job with PandaID=7041895715
[2026-03-11 23:11:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot224/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 00:27:44]  *** The last 200 lines of the pilot log: ***
[2026-03-12 00:27:44]  lfn=log.48955015._012260.job.log.tgz.1
[2026-03-12 00:27:44]  mtime=0
[2026-03-12 00:27:44]  protocol_id=None
[2026-03-12 00:27:44]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-12 00:27:44]  replicas=None
[2026-03-12 00:27:44]  scope=mc23_13p6TeV
[2026-03-12 00:27:44]  status=None
[2026-03-12 00:27:44]  status_code=0
[2026-03-12 00:27:44]  storage_token=
[2026-03-12 00:27:44]  surl=/var/lib/boinc/var/slot224/slots/0/PanDA_Pilot-7041895715/log.48955015._012260.job.log.tgz.1
[2026-03-12 00:27:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/58/15/log.48955015._012260.job.log.tgz.1
[2026-03-12 00:27:44]  workdir=None
[2026-03-12 00:27:44] ]
[2026-03-12 00:27:44] 2026-03-11 23:26:58,565 | INFO     | time since job start (4528s) is within the limit (349056.0s)
[2026-03-12 00:27:44] 2026-03-11 23:26:58,583 | INFO     | transferring file log.48955015._012260.job.log.tgz.1 from /var/lib/boinc/var/slot224/slots/0/PanDA_Pilot-7041895715/log.48955015._012260.job.log.tgz.1 to /var/lib/
[2026-03-12 00:27:44] 2026-03-11 23:26:58,584 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot224/slots/0/PanDA_Pilot-7041895715/log.48955015._012260.job.log.tgz.1 /var/lib/boinc/var/slot224/slots/0/
[2026-03-12 00:27:44] 2026-03-11 23:26:58,601 | INFO     | adding to output.list: log.48955015._012260.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/58/15/log.48955015._012260.job.log.tg
[2026-03-12 00:27:44] 2026-03-11 23:26:58,602 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-12 00:27:44] 2026-03-11 23:26:58,602 | INFO     | summary of transferred files:
[2026-03-12 00:27:44] 2026-03-11 23:26:58,602 | INFO     |  -- lfn=log.48955015._012260.job.log.tgz.1, status_code=0, status=transferred
[2026-03-12 00:27:44] 2026-03-11 23:26:58,602 | INFO     | stage-out finished correctly
[2026-03-12 00:27:44] 2026-03-11 23:26:59,598 | INFO     | monitor loop #325: job 0:7041895715 is in state 'finished'
[2026-03-12 00:27:44] 2026-03-11 23:26:59,598 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-12 00:27:44] 2026-03-11 23:27:00,577 | INFO     | time since job start (4530s) is within the limit (349056.0s)
[2026-03-12 00:27:44] 2026-03-11 23:27:01,423 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-12 00:27:44] 2026-03-11 23:27:02,082 | INFO     | job 7041895715 has state=finished
[2026-03-12 00:27:44] 2026-03-11 23:27:02,083 | INFO     | preparing for final server update for job 7041895715 in state='finished'
[2026-03-12 00:27:44] 2026-03-11 23:27:02,083 | INFO     | reading metadata from: /var/lib/boinc/var/slot224/slots/0/PanDA_Pilot-7041895715/jobReport.json
[2026-03-12 00:27:44] 2026-03-11 23:27:02,085 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot224/slots/0/workernode_map.json
[2026-03-12 00:27:44] 2026-03-11 23:27:02,086 | INFO     | this job has now completed (state=finished)
[2026-03-12 00:27:44] 2026-03-11 23:27:02,086 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-12 00:27:44] 2026-03-11 23:27:02,086 | INFO     | log transfer has been attempted: DONE
[2026-03-12 00:27:44] 2026-03-11 23:27:02,086 | INFO     | job 7041895715 has finished - writing final server update
[2026-03-12 00:27:44] 2026-03-11 23:27:02,086 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_13803/.job.ad'
[2026-03-12 00:27:44] 2026-03-11 23:27:02,087 | INFO     | total number of processed events: 400 (read)
[2026-03-12 00:27:44] 2026-03-11 23:27:02,102 | INFO     | monitor loop #326: job 0:7041895715 is in state 'finished'
[2026-03-12 00:27:44] 2026-03-11 23:27:02,103 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-12 00:27:44] 2026-03-11 23:27:02,110 | INFO     | using path: /var/lib/boinc/var/slot224/slots/0/PanDA_Pilot-7041895715/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 00:27:44] 2026-03-11 23:27:02,111 | INFO     | extracted standard info from prmon json
[2026-03-12 00:27:44] 2026-03-11 23:27:02,112 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 00:27:44] 2026-03-11 23:27:02,112 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 00:27:44] 2026-03-11 23:27:02,112 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 00:27:44] 2026-03-11 23:27:02,112 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 00:27:44] 2026-03-11 23:27:02,114 | INFO     | fitting pss+swap vs Time
[2026-03-12 00:27:44] 2026-03-11 23:27:02,114 | INFO     | sum of square deviations: 93240818.0
[2026-03-12 00:27:44] 2026-03-11 23:27:02,114 | INFO     | sum of deviations: 621218571.0
[2026-03-12 00:27:44] 2026-03-11 23:27:02,114 | INFO     | mean x: 1773269429.0
[2026-03-12 00:27:44] 2026-03-11 23:27:02,114 | INFO     | mean y: 2317198.2537313434
[2026-03-12 00:27:44] 2026-03-11 23:27:02,114 | INFO     | intersect: -11812121202.33351
[2026-03-12 00:27:44] 2026-03-11 23:27:02,115 | INFO     | chi2: 9.440443254151111e-05
[2026-03-12 00:27:44] 2026-03-11 23:27:02,115 | INFO     | current memory leak: 6.66 B/s (using 67 data points, chi2=0.00)
[2026-03-12 00:27:44] 2026-03-11 23:27:02,115 | INFO     | could have reported an average CPU frequency of 3574 MHz (6 samples)
[2026-03-12 00:27:44] 2026-03-11 23:27:02,115 | INFO     | ..............................
[2026-03-12 00:27:44] 2026-03-11 23:27:02,115 | INFO     | . Timing measurements:
[2026-03-12 00:27:44] 2026-03-11 23:27:02,116 | INFO     | . get job = 0 s
[2026-03-12 00:27:44] 2026-03-11 23:27:02,116 | INFO     | . initial setup = 5 s
[2026-03-12 00:27:44] 2026-03-11 23:27:02,116 | INFO     | . payload setup = 5 s
[2026-03-12 00:27:44] 2026-03-11 23:27:02,116 | INFO     | . stage-in = 0 s
[2026-03-12 00:27:44] 2026-03-11 23:27:02,116 | INFO     | . payload execution = 4507 s
[2026-03-12 00:27:44] 2026-03-11 23:27:02,116 | INFO     | . stage-out = 0 s
[2026-03-12 00:27:44] 2026-03-11 23:27:02,116 | INFO     | . log creation = 0 s
[2026-03-12 00:27:44] 2026-03-11 23:27:02,116 | INFO     | ..............................
[2026-03-12 00:27:44] 2026-03-11 23:27:02,338 | INFO     | PID=798970 has CPU usage=12.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 00:27:44] 2026-03-11 23:27:02,338 | INFO     | .. there are 47 such processes running
[2026-03-12 00:27:44] 2026-03-11 23:27:02,450 | INFO     | 
[2026-03-12 00:27:44] 2026-03-11 23:27:02,451 | INFO     | job summary report
[2026-03-12 00:27:44] 2026-03-11 23:27:02,451 | INFO     | --------------------------------------------------
[2026-03-12 00:27:44] 2026-03-11 23:27:02,451 | INFO     | PanDA job id: 7041895715
[2026-03-12 00:27:44] 2026-03-11 23:27:02,451 | INFO     | task id: 48955015
[2026-03-12 00:27:44] 2026-03-11 23:27:02,451 | INFO     | errors: (none)
[2026-03-12 00:27:44] 2026-03-11 23:27:02,451 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 00:27:44] 2026-03-11 23:27:02,451 | INFO     | pilot state: finished 
[2026-03-12 00:27:44] 2026-03-11 23:27:02,451 | INFO     | transexitcode: 0
[2026-03-12 00:27:44] 2026-03-11 23:27:02,451 | INFO     | exeerrorcode: 0
[2026-03-12 00:27:44] 2026-03-11 23:27:02,451 | INFO     | exeerrordiag: 
[2026-03-12 00:27:44] 2026-03-11 23:27:02,451 | INFO     | exitcode: 0
[2026-03-12 00:27:44] 2026-03-11 23:27:02,451 | INFO     | exitmsg: OK
[2026-03-12 00:27:44] 2026-03-11 23:27:02,451 | INFO     | cpuconsumptiontime: 17300 s
[2026-03-12 00:27:44] 2026-03-11 23:27:02,451 | INFO     | nevents: 400
[2026-03-12 00:27:44] 2026-03-11 23:27:02,451 | INFO     | neventsw: 0
[2026-03-12 00:27:44] 2026-03-11 23:27:02,451 | INFO     | pid: 805467
[2026-03-12 00:27:44] 2026-03-11 23:27:02,451 | INFO     | pgrp: 805467
[2026-03-12 00:27:44] 2026-03-11 23:27:02,451 | INFO     | corecount: 4
[2026-03-12 00:27:44] 2026-03-11 23:27:02,451 | INFO     | event service: False
[2026-03-12 00:27:44] 2026-03-11 23:27:02,451 | INFO     | sizes: {0: 2279817, 1: 2280278, 11: 2280278, 4516: 2306564, 4517: 2315641, 4520: 2315641, 4521: 2315963}
[2026-03-12 00:27:44] 2026-03-11 23:27:02,451 | INFO     | --------------------------------------------------
[2026-03-12 00:27:44] 2026-03-11 23:27:02,451 | INFO     | 
[2026-03-12 00:27:44] 2026-03-11 23:27:02,451 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot224/slots/0
[2026-03-12 00:27:44] 2026-03-11 23:27:02,472 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 00:27:44] 2026-03-11 23:27:02,472 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 00:27:44] 2026-03-11 23:27:02,473 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 00:27:44] 2026-03-11 23:27:02,473 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 00:27:44] 2026-03-11 23:27:02,473 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 00:27:44] 2026-03-11 23:27:02,473 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 00:27:44] 2026-03-11 23:27:02,473 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 00:27:44] 2026-03-11 23:27:02,473 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 00:27:44] 2026-03-11 23:27:02,473 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 00:27:44] 2026-03-11 23:27:02,473 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 00:27:44] 2026-03-11 23:27:02,473 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 00:27:44] 2026-03-11 23:27:02,473 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 00:27:44] 2026-03-11 23:27:02,473 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 00:27:44] 2026-03-11 23:27:02,473 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 00:27:44] 2026-03-11 23:27:02,473 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 00:27:44] 2026-03-11 23:27:02,473 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 00:27:44] 2026-03-11 23:27:02,473 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 00:27:44] 2026-03-11 23:27:02,473 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 00:27:44] 2026-03-11 23:27:02,473 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 00:27:44] 2026-03-11 23:27:02,473 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 00:27:44] 2026-03-11 23:27:02,473 | INFO     | job 7041895715 has completed (purged errors)
[2026-03-12 00:27:44] 2026-03-11 23:27:02,473 | INFO     | overall cleanup function is called
[2026-03-12 00:27:44] 2026-03-11 23:27:03,481 | INFO     | --- collectZombieJob: --- 10, [805467]
[2026-03-12 00:27:44] 2026-03-11 23:27:03,481 | INFO     | zombie collector waiting for pid 805467
[2026-03-12 00:27:44] 2026-03-11 23:27:03,482 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 00:27:44] 2026-03-11 23:27:03,482 | INFO     | collected zombie processes
[2026-03-12 00:27:44] 2026-03-11 23:27:03,482 | INFO     | will attempt to kill all subprocesses of pid=805467
[2026-03-12 00:27:44] 2026-03-11 23:27:04,049 | INFO     | process IDs to be killed: [805467] (in reverse order)
[2026-03-12 00:27:44] 2026-03-11 23:27:04,291 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 00:27:44] 2026-03-11 23:27:04,291 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 00:27:44] 2026-03-11 23:27:04,329 | INFO     | did not find any defunct processes belonging to 805467
[2026-03-12 00:27:44] 2026-03-11 23:27:04,367 | INFO     | did not find any defunct processes belonging to 805467
[2026-03-12 00:27:44] 2026-03-11 23:27:04,367 | INFO     | ready for new job
[2026-03-12 00:27:44] 2026-03-11 23:27:04,367 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 00:27:44] 2026-03-11 23:27:04,368 | INFO     | **************************************
[2026-03-12 00:27:44] 2026-03-11 23:27:04,368 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 00:27:44] 2026-03-11 23:27:04,368 | INFO     | **************************************
[2026-03-12 00:27:44] 2026-03-11 23:27:04,368 | INFO     | 
[2026-03-12 00:27:44] 2026-03-11 23:27:04,375 | INFO     | architecture information:
[2026-03-12 00:27:44] 2026-03-11 23:27:04,375 | INFO     | executing command: cat /etc/os-release
[2026-03-12 00:27:44] 2026-03-11 23:27:04,391 | INFO     | cat /etc/os-release:
[2026-03-12 00:27:44] NAME="CentOS Linux"
[2026-03-12 00:27:44] VERSION="7 (Core)"
[2026-03-12 00:27:44] ID="centos"
[2026-03-12 00:27:44] ID_LIKE="rhel fedora"
[2026-03-12 00:27:44] VERSION_ID="7"
[2026-03-12 00:27:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 00:27:44] ANSI_COLOR="0;31"
[2026-03-12 00:27:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 00:27:44] HOME_URL="https://www.centos.org/"
[2026-03-12 00:27:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 00:27:44] 
[2026-03-12 00:27:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 00:27:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 00:27:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 00:27:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 00:27:44] 
[2026-03-12 00:27:44] 2026-03-11 23:27:04,391 | INFO     | **************************************
[2026-03-12 00:27:44] 2026-03-11 23:27:04,894 | INFO     | executing command: df -mP /var/lib/boinc/var/slot224/slots/0
[2026-03-12 00:27:44] 2026-03-11 23:27:04,910 | INFO     | sufficient remaining disk space (31245467648 B)
[2026-03-12 00:27:44] 2026-03-11 23:27:04,910 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 00:27:44] 2026-03-11 23:27:04,910 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 00:27:44] 2026-03-11 23:27:04,910 | INFO     | update_server=False
[2026-03-12 00:27:44] 2026-03-11 23:27:04,910 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 00:27:44] 2026-03-11 23:27:04,910 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 00:27:44] 2026-03-11 23:27:05,611 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 00:27:44] 2026-03-11 23:27:05,611 | INFO     | aborting loop
[2026-03-12 00:27:44] 2026-03-11 23:27:05,697 | INFO     | all data control threads have been joined
[2026-03-12 00:27:44] 2026-03-11 23:27:05,798 | INFO     | all payload control threads have been joined
[2026-03-12 00:27:44] 2026-03-11 23:27:05,909 | INFO     | all job control threads have been joined
[2026-03-12 00:27:44] 2026-03-11 23:27:05,915 | INFO     | [job] retrieve thread has finished
[2026-03-12 00:27:44] 2026-03-11 23:27:06,147 | INFO     | [payload] failed_post thread has finished
[2026-03-12 00:27:44] 2026-03-11 23:27:06,255 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 00:27:44] 2026-03-11 23:27:06,616 | INFO     | [job] job monitor thread has finished
[2026-03-12 00:27:44] 2026-03-11 23:27:06,695 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 00:27:44] 2026-03-11 23:27:06,702 | INFO     | [data] control thread has finished
[2026-03-12 00:27:44] 2026-03-11 23:27:06,767 | INFO     | [job] validate thread has finished
[2026-03-12 00:27:44] 2026-03-11 23:27:06,804 | INFO     | [payload] control thread has finished
[2026-03-12 00:27:44] 2026-03-11 23:27:06,894 | INFO     | [payload] validate_post thread has finished
[2026-03-12 00:27:44] 2026-03-11 23:27:06,914 | INFO     | [job] control thread has finished
[2026-03-12 00:27:44] 2026-03-11 23:27:06,915 | INFO     | [data] copytool_out thread has finished
[2026-03-12 00:27:44] 2026-03-11 23:27:06,995 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 00:27:44] 2026-03-11 23:27:07,175 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 00:27:44] 2026-03-11 23:27:07,235 | INFO     | [data] copytool_in thread has finished
[2026-03-12 00:27:44] 2026-03-11 23:27:07,480 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 00:27:44] 2026-03-11 23:27:08,177 | INFO     | [job] queue monitor thread has finished
[2026-03-12 00:27:44] 2026-03-11 23:27:11,485 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 00:27:44] 2026-03-11 23:27:15,387 | INFO     | job.realtimelogging is not enabled
[2026-03-12 00:27:44] 2026-03-11 23:27:16,392 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 00:27:44] 2026-03-11 23:27:35,086 | INFO     | PID=798970 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-12 00:27:44] 2026-03-11 23:27:35,087 | INFO     | .. there are 47 such processes running
[2026-03-12 00:27:44] 2026-03-11 23:27:35,088 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 00:27:44] 2026-03-11 23:27:35,088 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 00:27:44] 2026-03-11 23:27:35,088 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 00:27:44] 2026-03-11 23:27:37,553 | INFO     | [monitor] cgroup control has ended
[2026-03-12 00:27:44] 2026-03-11 23:27:38,857 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22495736137536)>', '<ExcThread(monitor, started 22495500715776)>']
[2026-03-12 00:27:44] 2026-03-11 23:27:39,107 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 00:27:44] 2026-03-11 23:27:39,107 | INFO     | [monitor] control thread has ended
[2026-03-12 00:27:44] 2026-03-11 23:27:43,882 | INFO     | all workflow threads have been joined
[2026-03-12 00:27:44] 2026-03-11 23:27:43,882 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 00:27:44] 2026-03-11 23:27:43,883 | INFO     | traces error code: 0
[2026-03-12 00:27:44] 2026-03-11 23:27:43,883 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 00:27:44] 2026-03-11 23:27:44,079 [wrapper] ==== pilot stdout END ====
[2026-03-12 00:27:44] 2026-03-11 23:27:44,081 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 00:27:44] 2026-03-11 23:27:44,084 [wrapper] pilotpid: 798970
[2026-03-12 00:27:44] 2026-03-11 23:27:44,086 [wrapper] Pilot exit status: 0
[2026-03-12 00:27:44] 2026-03-11 23:27:44,093 [wrapper] pandaids: 7041895715
[2026-03-12 00:27:44] 2026-03-11 23:27:44,240 [wrapper] cleanup supervisor_pilot 1542286 798971
[2026-03-12 00:27:44] 2026-03-11 23:27:44,243 [wrapper] Test setup, not cleaning
[2026-03-12 00:27:44] 2026-03-11 23:27:44,246 [wrapper] apfmon messages muted
[2026-03-12 00:27:44] 2026-03-11 23:27:44,248 [wrapper] ==== wrapper stdout END ====
[2026-03-12 00:27:44] 2026-03-11 23:27:44,250 [wrapper] ==== wrapper stderr END ====
[2026-03-12 00:27:44]  *** Error codes and diagnostics ***
[2026-03-12 00:27:44]     "exeErrorCode": 0,
[2026-03-12 00:27:44]     "exeErrorDiag": "",
[2026-03-12 00:27:44]     "pilotErrorCode": 0,
[2026-03-12 00:27:44]     "pilotErrorDiag": "",
[2026-03-12 00:27:44]  *** Listing of results directory ***
[2026-03-12 00:27:44] total 607269
[2026-03-12 00:27:44] -rw-r--r--. 1 boinc boinc    584627 Mar 10 04:18 pilot3.tar.gz
[2026-03-12 00:27:44] -rwx------. 1 boinc boinc     36322 Mar 10 04:55 runpilot2-wrapper.sh
[2026-03-12 00:27:44] -rw-r--r--. 1 boinc boinc      5111 Mar 10 04:56 queuedata.json
[2026-03-12 00:27:44] -rw-r--r--. 1 boinc boinc       100 Mar 11 23:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 00:27:44] -rwxr-xr-x. 1 boinc boinc      7986 Mar 11 23:11 run_atlas
[2026-03-12 00:27:44] -rw-r--r--. 1 boinc boinc       105 Mar 11 23:11 job.xml
[2026-03-12 00:27:44] -rw-r--r--. 1 boinc boinc      6707 Mar 11 23:11 init_data.xml
[2026-03-12 00:27:44] -rw-r--r--. 2 boinc boinc 439798927 Mar 11 23:11 EVNT.46701403._002301.pool.root.1
[2026-03-12 00:27:44] -rw-r--r--. 2 boinc boinc     15845 Mar 11 23:11 start_atlas.sh
[2026-03-12 00:27:44] drwxrwx--x. 2 boinc boinc         5 Mar 11 23:11 shared
[2026-03-12 00:27:44] -rw-r--r--. 2 boinc boinc    597967 Mar 11 23:11 input.tar.gz
[2026-03-12 00:27:44] -rw-r--r--. 1 boinc boinc         0 Mar 11 23:11 boinc_lockfile
[2026-03-12 00:27:44] -rw-r--r--. 1 boinc boinc      2572 Mar 11 23:11 pandaJob.out
[2026-03-12 00:27:44] -rw-------. 1 boinc boinc   1006243 Mar 11 23:11 agis_schedconf.cvmfs.json
[2026-03-12 00:27:44] -rw-------. 1 boinc boinc   1511578 Mar 11 23:11 agis_ddmendpoints.agis.ALL.json
[2026-03-12 00:27:44] -rw-------. 1 boinc boinc       445 Mar 11 23:11 workernode_map.json
[2026-03-12 00:27:44] drwx------. 5 boinc boinc        22 Mar 11 23:11 pilot3
[2026-03-12 00:27:44] -rw-------. 1 boinc boinc 179508827 Mar 12 00:26 HITS.48955015._012260.pool.root.1
[2026-03-12 00:27:44] -rw-r--r--. 1 boinc boinc       530 Mar 12 00:26 boinc_task_state.xml
[2026-03-12 00:27:44] -rw-------. 1 boinc boinc      1045 Mar 12 00:26 memory_monitor_summary.json
[2026-03-12 00:27:44] -rw-------. 1 boinc boinc    299762 Mar 12 00:26 log.48955015._012260.job.log.tgz.1
[2026-03-12 00:27:44] -rw-------. 1 boinc boinc      6386 Mar 12 00:27 heartbeat.json
[2026-03-12 00:27:44] -rw-------. 1 boinc boinc        95 Mar 12 00:27 pilot_heartbeat.json
[2026-03-12 00:27:44] -rw-r--r--. 1 boinc boinc      8192 Mar 12 00:27 boinc_mmap_file
[2026-03-12 00:27:44] -rw-r--r--. 1 boinc boinc        27 Mar 12 00:27 wrapper_checkpoint.txt
[2026-03-12 00:27:44] -rw-------. 1 boinc boinc      4901 Mar 12 00:27 pilotlog.txt
[2026-03-12 00:27:44] -rw-------. 1 boinc boinc    665313 Mar 12 00:27 log.48955015._012260.job.log.1
[2026-03-12 00:27:44] -rw-------. 1 boinc boinc       357 Mar 12 00:27 output.list
[2026-03-12 00:27:44] -rw-r--r--. 1 boinc boinc       620 Mar 12 00:27 runtime_log
[2026-03-12 00:27:44] -rw-------. 1 boinc boinc    983040 Mar 12 00:27 result.tar.gz
[2026-03-12 00:27:44] -rw-r--r--. 1 boinc boinc      9221 Mar 12 00:27 runtime_log.err
[2026-03-12 00:27:44] -rw-------. 1 boinc boinc       670 Mar 12 00:27 a2HMDmmM3J9n9Rq4apOajLDm4fhM0noT9bVooX4SDmt8bLDmA2jBtm.diag
[2026-03-12 00:27:44] -rw-r--r--. 1 boinc boinc     21590 Mar 12 00:27 stderr.txt
[2026-03-12 00:27:44] HITS file was successfully produced:
[2026-03-12 00:27:44] -rw-------. 1 boinc boinc 179508827 Mar 12 00:26 shared/HITS.pool.root.1
[2026-03-12 00:27:44]  *** Contents of shared directory: ***
[2026-03-12 00:27:44] total 605823
[2026-03-12 00:27:44] -rw-r--r--. 2 boinc boinc 439798927 Mar 11 23:11 ATLAS.root_0
[2026-03-12 00:27:44] -rw-r--r--. 2 boinc boinc     15845 Mar 11 23:11 start_atlas.sh
[2026-03-12 00:27:44] -rw-r--r--. 2 boinc boinc    597967 Mar 11 23:11 input.tar.gz
[2026-03-12 00:27:44] -rw-------. 1 boinc boinc 179508827 Mar 12 00:26 HITS.pool.root.1
[2026-03-12 00:27:44] -rw-------. 1 boinc boinc    983040 Mar 12 00:27 result.tar.gz
00:27:46 (794389): run_atlas exited; CPU time 17545.083837
00:27:46 (794389): called boinc_finish(0)

</stderr_txt>
]]>

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