Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:39:53 (2667932): wrapper (7.7.26015): starting
13:39:53 (2667932): wrapper: running run_atlas (--nthreads 8)
[2026-03-10 13:39:53] Arguments: --nthreads 8
[2026-03-10 13:39:53] Threads: 8
[2026-03-10 13:39:53] Checking for CVMFS
[2026-03-10 13:39:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-10 13:39:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-10 13:39:55] Running cvmfs_config stat atlas.cern.ch
[2026-03-10 13:39:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-10 13:39:57] 2.13.3.0 9119 107929 165704 157125 1 523 36951504 39288832 8568 16776704 0 61886750 99.646 60833893 36975 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-10 13:39:57] CVMFS is ok
[2026-03-10 13:39:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 13:39:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 13:39:57] Further information can be found at the LHC@home message board.
[2026-03-10 13:39:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 13:39:57] Checking for apptainer binary...
[2026-03-10 13:39:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-10 13:39:57] Running /usr/bin/apptainer --version
[2026-03-10 13:39:57] apptainer version 1.4.5-2.el9
[2026-03-10 13:39:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 13:39:58] c-210-12.aglt2.org
[2026-03-10 13:39:58] apptainer works
[2026-03-10 13:39:59] Set ATHENA_PROC_NUMBER=8
[2026-03-10 13:39:59] Set ATHENA_CORE_NUMBER=8
[2026-03-10 13:39:59] Starting ATLAS job with PandaID=7036003078
[2026-03-10 13:39:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 20:48:44]  *** The last 200 lines of the pilot log: ***
[2026-03-10 20:48:44] 2026-03-11 00:47:49,160 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 20:48:44] 2026-03-11 00:47:49,160 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 20:48:44] 2026-03-11 00:47:49,177 | INFO     | fitting pss+swap vs Time
[2026-03-10 20:48:44] 2026-03-11 00:47:49,178 | INFO     | sum of square deviations: 22324350416.555317
[2026-03-10 20:48:44] 2026-03-11 00:47:49,187 | INFO     | sum of deviations: 523220830477.38477
[2026-03-10 20:48:44] 2026-03-11 00:47:49,187 | INFO     | mean x: 1773177357.8966346
[2026-03-10 20:48:44] 2026-03-11 00:47:49,187 | INFO     | mean y: 2421359.846153846
[2026-03-10 20:48:44] 2026-03-11 00:47:49,187 | INFO     | intersect: -41555935881.05974
[2026-03-10 20:48:44] 2026-03-11 00:47:49,192 | INFO     | chi2: 11.064106434662962
[2026-03-10 20:48:44] 2026-03-11 00:47:49,193 | INFO     | sum of square deviations: 21529162401.14356
[2026-03-10 20:48:44] 2026-03-11 00:47:49,204 | INFO     | sum of deviations: 568923149674.8517
[2026-03-10 20:48:44] 2026-03-11 00:47:49,204 | INFO     | mean x: 1773177205.406326
[2026-03-10 20:48:44] 2026-03-11 00:47:49,204 | INFO     | mean y: 2430049.7493917276
[2026-03-10 20:48:44] 2026-03-11 00:47:49,204 | INFO     | intersect: -46855015764.20546
[2026-03-10 20:48:44] 2026-03-11 00:47:49,205 | INFO     | chi2: 9.678648874985273
[2026-03-10 20:48:44] 2026-03-11 00:47:49,205 | INFO     | current chi2=9.678648874985273 (change=12.52209175552724 %)
[2026-03-10 20:48:44] 2026-03-11 00:47:49,205 | INFO     | right removable region: 410
[2026-03-10 20:48:44] 2026-03-11 00:47:49,210 | INFO     | sum of square deviations: 21528934383.328396
[2026-03-10 20:48:44] 2026-03-11 00:47:49,219 | INFO     | sum of deviations: 390523592622.10974
[2026-03-10 20:48:44] 2026-03-11 00:47:49,219 | INFO     | mean x: 1773177510.408759
[2026-03-10 20:48:44] 2026-03-11 00:47:49,219 | INFO     | mean y: 2446788.802919708
[2026-03-10 20:48:44] 2026-03-11 00:47:49,219 | INFO     | intersect: -32162064440.22433
[2026-03-10 20:48:44] 2026-03-11 00:47:49,220 | INFO     | chi2: 7.066726219597439
[2026-03-10 20:48:44] 2026-03-11 00:47:49,220 | INFO     | current chi2=7.066726219597439 (change=36.129263928102226 %)
[2026-03-10 20:48:44] 2026-03-11 00:47:49,221 | INFO     | sum of square deviations: 20752660304.31784
[2026-03-10 20:48:44] 2026-03-11 00:47:49,229 | INFO     | sum of deviations: 286405811073.2219
[2026-03-10 20:48:44] 2026-03-11 00:47:49,230 | INFO     | mean x: 1773177662.9187193
[2026-03-10 20:48:44] 2026-03-11 00:47:49,230 | INFO     | mean y: 2467238.7339901477
[2026-03-10 20:48:44] 2026-03-11 00:47:49,230 | INFO     | intersect: -24469016382.066757
[2026-03-10 20:48:44] 2026-03-11 00:47:49,235 | INFO     | chi2: 4.780836514921333
[2026-03-10 20:48:44] 2026-03-11 00:47:49,235 | INFO     | current chi2=4.780836514921333 (change=32.34722322108473 %)
[2026-03-10 20:48:44] 2026-03-11 00:47:49,235 | INFO     | sum of square deviations: 19995344111.775455
[2026-03-10 20:48:44] 2026-03-11 00:47:49,244 | INFO     | sum of deviations: 202166261608.67642
[2026-03-10 20:48:44] 2026-03-11 00:47:49,244 | INFO     | mean x: 1773177815.4214463
[2026-03-10 20:48:44] 2026-03-11 00:47:49,244 | INFO     | mean y: 2484193.386533666
[2026-03-10 20:48:44] 2026-03-11 00:47:49,245 | INFO     | intersect: -17925525852.716297
[2026-03-10 20:48:44] 2026-03-11 00:47:49,245 | INFO     | chi2: 3.334130298220881
[2026-03-10 20:48:44] 2026-03-11 00:47:49,245 | INFO     | current chi2=3.334130298220881 (change=30.260524746771374 %)
[2026-03-10 20:48:44] 2026-03-11 00:47:49,250 | INFO     | sum of square deviations: 19256631240.020164
[2026-03-10 20:48:44] 2026-03-11 00:47:49,256 | INFO     | sum of deviations: 150045966921.4038
[2026-03-10 20:48:44] 2026-03-11 00:47:49,256 | INFO     | mean x: 1773177967.929293
[2026-03-10 20:48:44] 2026-03-11 00:47:49,256 | INFO     | mean y: 2494936.085858586
[2026-03-10 20:48:44] 2026-03-11 00:47:49,256 | INFO     | intersect: -13813950910.82553
[2026-03-10 20:48:44] 2026-03-11 00:47:49,257 | INFO     | chi2: 2.7862179240126475
[2026-03-10 20:48:44] 2026-03-11 00:47:49,257 | INFO     | current chi2=2.7862179240126475 (change=16.43344216333129 %)
[2026-03-10 20:48:44] 2026-03-11 00:47:49,257 | INFO     | left removable region: 40
[2026-03-10 20:48:44] 2026-03-11 00:47:49,258 | INFO     | sum of square deviations: 15707378388.218977
[2026-03-10 20:48:44] 2026-03-11 00:47:49,272 | INFO     | sum of deviations: 50913189891.66489
[2026-03-10 20:48:44] 2026-03-11 00:47:49,273 | INFO     | mean x: 1773178394.954054
[2026-03-10 20:48:44] 2026-03-11 00:47:49,273 | INFO     | mean y: 2538069.156756757
[2026-03-10 20:48:44] 2026-03-11 00:47:49,273 | INFO     | intersect: -5744962634.194527
[2026-03-10 20:48:44] 2026-03-11 00:47:49,274 | INFO     | chi2: 0.2894624906593304
[2026-03-10 20:48:44] 2026-03-11 00:47:49,316 | INFO     | current memory leak: 3.24 B/s (using 370 data points, chi2=0.29)
[2026-03-10 20:48:44] 2026-03-11 00:47:49,317 | INFO     | could have reported an average CPU frequency of 2600 MHz (18 samples)
[2026-03-10 20:48:44] 2026-03-11 00:47:49,317 | INFO     | ..............................
[2026-03-10 20:48:44] 2026-03-11 00:47:49,317 | INFO     | . Timing measurements:
[2026-03-10 20:48:44] 2026-03-11 00:47:49,317 | INFO     | . get job = 1 s
[2026-03-10 20:48:44] 2026-03-11 00:47:49,318 | INFO     | . initial setup = 67 s
[2026-03-10 20:48:44] 2026-03-11 00:47:49,318 | INFO     | . payload setup = 71 s
[2026-03-10 20:48:44] 2026-03-11 00:47:49,318 | INFO     | . stage-in = 1 s
[2026-03-10 20:48:44] 2026-03-11 00:47:49,318 | INFO     | . payload execution = 25404 s
[2026-03-10 20:48:44] 2026-03-11 00:47:49,318 | INFO     | . stage-out = 3 s
[2026-03-10 20:48:44] 2026-03-11 00:47:49,318 | INFO     | . log creation = 0 s
[2026-03-10 20:48:44] 2026-03-11 00:47:49,318 | INFO     | ..............................
[2026-03-10 20:48:44] 2026-03-11 00:47:49,536 | INFO     | 
[2026-03-10 20:48:44] 2026-03-11 00:47:49,542 | INFO     | job summary report
[2026-03-10 20:48:44] 2026-03-11 00:47:49,542 | INFO     | --------------------------------------------------
[2026-03-10 20:48:44] 2026-03-11 00:47:49,542 | INFO     | PanDA job id: 7036003078
[2026-03-10 20:48:44] 2026-03-11 00:47:49,542 | INFO     | task id: 48847427
[2026-03-10 20:48:44] 2026-03-11 00:47:49,542 | INFO     | errors: (none)
[2026-03-10 20:48:44] 2026-03-11 00:47:49,542 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 20:48:44] 2026-03-11 00:47:49,542 | INFO     | pilot state: finished 
[2026-03-10 20:48:44] 2026-03-11 00:47:49,543 | INFO     | transexitcode: 0
[2026-03-10 20:48:44] 2026-03-11 00:47:49,543 | INFO     | exeerrorcode: 0
[2026-03-10 20:48:44] 2026-03-11 00:47:49,543 | INFO     | exeerrordiag: 
[2026-03-10 20:48:44] 2026-03-11 00:47:49,543 | INFO     | exitcode: 0
[2026-03-10 20:48:44] 2026-03-11 00:47:49,543 | INFO     | exitmsg: OK
[2026-03-10 20:48:44] 2026-03-11 00:47:49,543 | INFO     | cpuconsumptiontime: 52654 s
[2026-03-10 20:48:44] 2026-03-11 00:47:49,543 | INFO     | nevents: 400
[2026-03-10 20:48:44] 2026-03-11 00:47:49,543 | INFO     | neventsw: 0
[2026-03-10 20:48:44] 2026-03-11 00:47:49,543 | INFO     | pid: 2681594
[2026-03-10 20:48:44] 2026-03-11 00:47:49,543 | INFO     | pgrp: 2681594
[2026-03-10 20:48:44] 2026-03-11 00:47:49,544 | INFO     | corecount: 8
[2026-03-10 20:48:44] 2026-03-11 00:47:49,544 | INFO     | event service: False
[2026-03-10 20:48:44] 2026-03-11 00:47:49,544 | INFO     | sizes: {0: 2279189, 1: 2279790, 2: 2279874, 4: 2279902, 5: 2279902, 7: 2279902, 8: 2280519, 9: 2280547, 11: 2280575, 25480: 2316655, 25485: 2325653, 25486: 2325989
[2026-03-10 20:48:44] 2026-03-11 00:47:49,544 | INFO     | --------------------------------------------------
[2026-03-10 20:48:44] 2026-03-11 00:47:49,544 | INFO     | 
[2026-03-10 20:48:44] 2026-03-11 00:47:49,544 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-10 20:48:44] 2026-03-11 00:47:49,537 | INFO     | time since job start (25501s) is within the limit (349056.0s)
[2026-03-10 20:48:44] 2026-03-11 00:47:49,715 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 20:48:44] 2026-03-11 00:47:49,716 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 20:48:44] 2026-03-11 00:47:49,716 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 20:48:44] 2026-03-11 00:47:49,716 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 20:48:44] 2026-03-11 00:47:49,716 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 20:48:44] 2026-03-11 00:47:49,716 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 20:48:44] 2026-03-11 00:47:49,716 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 20:48:44] 2026-03-11 00:47:49,716 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 20:48:44] 2026-03-11 00:47:49,716 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 20:48:44] 2026-03-11 00:47:49,717 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 20:48:44] 2026-03-11 00:47:49,717 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 20:48:44] 2026-03-11 00:47:49,717 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 20:48:44] 2026-03-11 00:47:49,717 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 20:48:44] 2026-03-11 00:47:49,717 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 20:48:44] 2026-03-11 00:47:49,717 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 20:48:44] 2026-03-11 00:47:49,717 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 20:48:44] 2026-03-11 00:47:49,717 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 20:48:44] 2026-03-11 00:47:49,718 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 20:48:44] 2026-03-11 00:47:49,718 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 20:48:44] 2026-03-11 00:47:49,718 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 20:48:44] 2026-03-11 00:47:49,718 | INFO     | job 7036003078 has completed (purged errors)
[2026-03-10 20:48:44] 2026-03-11 00:47:49,718 | INFO     | overall cleanup function is called
[2026-03-10 20:48:44] 2026-03-11 00:47:50,736 | INFO     | --- collectZombieJob: --- 10, [2681594]
[2026-03-10 20:48:44] 2026-03-11 00:47:50,736 | INFO     | zombie collector waiting for pid 2681594
[2026-03-10 20:48:44] 2026-03-11 00:47:50,736 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 20:48:44] 2026-03-11 00:47:50,737 | INFO     | collected zombie processes
[2026-03-10 20:48:44] 2026-03-11 00:47:50,737 | INFO     | will attempt to kill all subprocesses of pid=2681594
[2026-03-10 20:48:44] 2026-03-11 00:47:51,221 | INFO     | process IDs to be killed: [2681594] (in reverse order)
[2026-03-10 20:48:44] 2026-03-11 00:47:51,564 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 20:48:44] 2026-03-11 00:47:51,564 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 20:48:44] 2026-03-11 00:47:51,577 | INFO     | did not find any defunct processes belonging to 2681594
[2026-03-10 20:48:44] 2026-03-11 00:47:51,593 | INFO     | did not find any defunct processes belonging to 2681594
[2026-03-10 20:48:44] 2026-03-11 00:47:51,593 | INFO     | ready for new job
[2026-03-10 20:48:44] 2026-03-11 00:47:51,593 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 20:48:44] 2026-03-11 00:47:51,600 | INFO     | **************************************
[2026-03-10 20:48:44] 2026-03-11 00:47:51,600 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 20:48:44] 2026-03-11 00:47:51,601 | INFO     | **************************************
[2026-03-10 20:48:44] 2026-03-11 00:47:51,601 | INFO     | 
[2026-03-10 20:48:44] 2026-03-11 00:47:51,608 | INFO     | architecture information:
[2026-03-10 20:48:44] 2026-03-11 00:47:51,608 | INFO     | executing command: cat /etc/os-release
[2026-03-10 20:48:44] 2026-03-11 00:47:51,658 | INFO     | cat /etc/os-release:
[2026-03-10 20:48:44] NAME="CentOS Linux"
[2026-03-10 20:48:44] VERSION="7 (Core)"
[2026-03-10 20:48:44] ID="centos"
[2026-03-10 20:48:44] ID_LIKE="rhel fedora"
[2026-03-10 20:48:44] VERSION_ID="7"
[2026-03-10 20:48:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 20:48:44] ANSI_COLOR="0;31"
[2026-03-10 20:48:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 20:48:44] HOME_URL="https://www.centos.org/"
[2026-03-10 20:48:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 20:48:44] 
[2026-03-10 20:48:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 20:48:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 20:48:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 20:48:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 20:48:44] 
[2026-03-10 20:48:44] 2026-03-11 00:47:51,659 | INFO     | **************************************
[2026-03-10 20:48:44] 2026-03-11 00:47:52,163 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-10 20:48:44] 2026-03-11 00:47:52,203 | INFO     | sufficient remaining disk space (52350156800 B)
[2026-03-10 20:48:44] 2026-03-11 00:47:52,204 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 20:48:44] 2026-03-11 00:47:52,204 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 20:48:44] 2026-03-11 00:47:52,204 | INFO     | update_server=False
[2026-03-10 20:48:44] 2026-03-11 00:47:52,204 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 20:48:44] 2026-03-11 00:47:52,205 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 20:48:44] 2026-03-11 00:47:52,205 | INFO     | aborting loop
[2026-03-10 20:48:44] 2026-03-11 00:47:52,295 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 20:48:44] 2026-03-11 00:47:52,709 | INFO     | all payload control threads have been joined
[2026-03-10 20:48:44] 2026-03-11 00:47:52,846 | INFO     | all data control threads have been joined
[2026-03-10 20:48:44] 2026-03-11 00:47:52,979 | INFO     | all job control threads have been joined
[2026-03-10 20:48:44] 2026-03-11 00:47:53,210 | INFO     | [job] retrieve thread has finished
[2026-03-10 20:48:44] 2026-03-11 00:47:53,211 | INFO     | [job] job monitor thread has finished
[2026-03-10 20:48:44] 2026-03-11 00:47:53,398 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 20:48:44] 2026-03-11 00:47:53,430 | INFO     | [job] validate thread has finished
[2026-03-10 20:48:44] 2026-03-11 00:47:53,456 | INFO     | [data] copytool_in thread has finished
[2026-03-10 20:48:44] 2026-03-11 00:47:53,667 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 20:48:44] 2026-03-11 00:47:53,715 | INFO     | [payload] control thread has finished
[2026-03-10 20:48:44] 2026-03-11 00:47:53,851 | INFO     | [data] control thread has finished
[2026-03-10 20:48:44] 2026-03-11 00:47:53,985 | INFO     | [job] control thread has finished
[2026-03-10 20:48:44] 2026-03-11 00:47:54,093 | INFO     | [payload] failed_post thread has finished
[2026-03-10 20:48:44] 2026-03-11 00:47:54,312 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 20:48:44] 2026-03-11 00:47:54,316 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 20:48:44] 2026-03-11 00:47:54,417 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 20:48:44] 2026-03-11 00:47:54,564 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 20:48:44] 2026-03-11 00:47:54,793 | INFO     | [payload] validate_post thread has finished
[2026-03-10 20:48:44] 2026-03-11 00:47:55,405 | INFO     | [data] copytool_out thread has finished
[2026-03-10 20:48:44] 2026-03-11 00:47:55,571 | INFO     | [job] queue monitor thread has finished
[2026-03-10 20:48:44] 2026-03-11 00:47:56,304 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 20:48:44] 2026-03-11 00:48:26,362 | INFO     | PID=2673956 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 20:48:44] 2026-03-11 00:48:26,362 | INFO     | .. there are 7 such processes running
[2026-03-10 20:48:44] 2026-03-11 00:48:26,363 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 20:48:44] 2026-03-11 00:48:26,363 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 20:48:44] 2026-03-11 00:48:26,363 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 20:48:44] 2026-03-11 00:48:33,372 | INFO     | [monitor] cgroup control has ended
[2026-03-10 20:48:44] 2026-03-11 00:48:35,310 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139829194282816)>', '<ExcThread(monitor, started 139828800763648)>']
[2026-03-10 20:48:44] 2026-03-11 00:48:35,438 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 20:48:44] 2026-03-11 00:48:35,438 | INFO     | [monitor] control thread has ended
[2026-03-10 20:48:44] 2026-03-11 00:48:40,336 | INFO     | all workflow threads have been joined
[2026-03-10 20:48:44] 2026-03-11 00:48:40,336 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 20:48:44] 2026-03-11 00:48:40,337 | INFO     | traces error code: 0
[2026-03-10 20:48:44] 2026-03-11 00:48:40,337 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 20:48:44] 2026-03-11 00:48:42,412 [wrapper] ==== pilot stdout END ====
[2026-03-10 20:48:44] 2026-03-11 00:48:42,473 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 20:48:44] 2026-03-11 00:48:42,537 [wrapper] pilotpid: 2673956
[2026-03-10 20:48:44] 2026-03-11 00:48:42,591 [wrapper] Pilot exit status: 0
[2026-03-10 20:48:44] 2026-03-11 00:48:42,970 [wrapper] pandaids: 7036003078
[2026-03-10 20:48:44] 2026-03-11 00:48:43,406 [wrapper] cleanup supervisor_pilot 3285837 2673957
[2026-03-10 20:48:44] 2026-03-11 00:48:43,442 [wrapper] Test setup, not cleaning
[2026-03-10 20:48:44] 2026-03-11 00:48:43,494 [wrapper] apfmon messages muted
[2026-03-10 20:48:44] 2026-03-11 00:48:43,546 [wrapper] ==== wrapper stdout END ====
[2026-03-10 20:48:44] 2026-03-11 00:48:43,562 [wrapper] ==== wrapper stderr END ====
[2026-03-10 20:48:44]  *** Error codes and diagnostics ***
[2026-03-10 20:48:44]     "exeErrorCode": 0,
[2026-03-10 20:48:44]     "exeErrorDiag": "",
[2026-03-10 20:48:44]     "pilotErrorCode": 0,
[2026-03-10 20:48:44]     "pilotErrorDiag": "",
[2026-03-10 20:48:44]  *** Listing of results directory ***
[2026-03-10 20:48:44] total 468028
[2026-03-10 20:48:44] -rwx------. 1 boincer umatlas     36322 Mar  2 09:01 runpilot2-wrapper.sh
[2026-03-10 20:48:44] -rw-r--r--. 1 boincer umatlas      5111 Mar  2 09:02 queuedata.json
[2026-03-10 20:48:44] -rw-r--r--. 1 boincer umatlas    584627 Mar  2 09:02 pilot3.tar.gz
[2026-03-10 20:48:44] -rw-r--r--. 1 boincer umatlas       100 Mar 10 13:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 20:48:44] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 10 13:39 run_atlas
[2026-03-10 20:48:44] -rw-r--r--. 1 boincer umatlas       105 Mar 10 13:39 job.xml
[2026-03-10 20:48:44] -rw-r--r--. 2 boincer umatlas 273061051 Mar 10 13:39 EVNT.48453642._000003.pool.root.1
[2026-03-10 20:48:44] -rw-r--r--. 2 boincer umatlas     15845 Mar 10 13:39 start_atlas.sh
[2026-03-10 20:48:44] drwxrwx--x. 2 boincer umatlas      4096 Mar 10 13:39 shared
[2026-03-10 20:48:44] -rw-r--r--. 2 boincer umatlas    597957 Mar 10 13:39 input.tar.gz
[2026-03-10 20:48:44] -rw-r--r--. 1 boincer umatlas         0 Mar 10 13:39 boinc_lockfile
[2026-03-10 20:48:44] -rw-r--r--. 1 boincer umatlas      2594 Mar 10 13:39 pandaJob.out
[2026-03-10 20:48:44] -rw-------. 1 boincer umatlas        57 Mar 10 13:40 setup.sh.local
[2026-03-10 20:48:44] -rw-------. 1 boincer umatlas       433 Mar 10 13:42 workernode_map.json
[2026-03-10 20:48:44] -rw-------. 1 boincer umatlas   1006702 Mar 10 13:42 agis_schedconf.cvmfs.json
[2026-03-10 20:48:44] drwx------. 5 boincer umatlas      4096 Mar 10 13:42 pilot3
[2026-03-10 20:48:44] -rw-r--r--. 1 boincer umatlas      6658 Mar 10 20:37 init_data.xml
[2026-03-10 20:48:44] -rw-------. 1 boincer umatlas 194657824 Mar 10 20:45 HITS.48847427._000069.pool.root.1
[2026-03-10 20:48:44] -rw-r--r--. 1 boincer umatlas       530 Mar 10 20:45 boinc_task_state.xml
[2026-03-10 20:48:44] -rw-------. 1 boincer umatlas      1040 Mar 10 20:47 memory_monitor_summary.json
[2026-03-10 20:48:44] -rw-------. 1 boincer umatlas        95 Mar 10 20:47 pilot_heartbeat.json
[2026-03-10 20:48:44] -rw-------. 1 boincer umatlas   1511578 Mar 10 20:47 agis_ddmendpoints.agis.ALL.json
[2026-03-10 20:48:44] -rw-------. 1 boincer umatlas    609006 Mar 10 20:47 log.48847427._000069.job.log.tgz.1
[2026-03-10 20:48:44] -rw-------. 1 boincer umatlas      6375 Mar 10 20:47 heartbeat.json
[2026-03-10 20:48:44] -rw-r--r--. 1 boincer umatlas      8192 Mar 10 20:48 boinc_mmap_file
[2026-03-10 20:48:44] -rw-------. 1 boincer umatlas      4819 Mar 10 20:48 pilotlog.txt
[2026-03-10 20:48:44] -rw-r--r--. 1 boincer umatlas        27 Mar 10 20:48 wrapper_checkpoint.txt
[2026-03-10 20:48:44] -rw-------. 1 boincer umatlas   3194785 Mar 10 20:48 log.48847427._000069.job.log.1
[2026-03-10 20:48:44] -rw-------. 1 boincer umatlas       357 Mar 10 20:48 output.list
[2026-03-10 20:48:44] -rw-r--r--. 1 boincer umatlas       620 Mar 10 20:48 runtime_log
[2026-03-10 20:48:44] -rw-------. 1 boincer umatlas   3819520 Mar 10 20:48 result.tar.gz
[2026-03-10 20:48:44] -rw-r--r--. 1 boincer umatlas      9342 Mar 10 20:48 runtime_log.err
[2026-03-10 20:48:44] -rw-------. 1 boincer umatlas       657 Mar 10 20:48 GIENDmn0IH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmLaBLDmAPhRXn.diag
[2026-03-10 20:48:44] -rw-r--r--. 1 boincer umatlas     21056 Mar 10 20:48 stderr.txt
[2026-03-10 20:48:44] HITS file was successfully produced:
[2026-03-10 20:48:44] -rw-------. 1 boincer umatlas 194657824 Mar 10 20:45 shared/HITS.pool.root.1
[2026-03-10 20:48:44]  *** Contents of shared directory: ***
[2026-03-10 20:48:44] total 461096
[2026-03-10 20:48:44] -rw-r--r--. 2 boincer umatlas 273061051 Mar 10 13:39 ATLAS.root_0
[2026-03-10 20:48:44] -rw-r--r--. 2 boincer umatlas     15845 Mar 10 13:39 start_atlas.sh
[2026-03-10 20:48:44] -rw-r--r--. 2 boincer umatlas    597957 Mar 10 13:39 input.tar.gz
[2026-03-10 20:48:44] -rw-------. 1 boincer umatlas 194657824 Mar 10 20:45 HITS.pool.root.1
[2026-03-10 20:48:44] -rw-------. 1 boincer umatlas   3819520 Mar 10 20:48 result.tar.gz
20:48:45 (2667932): run_atlas exited; CPU time 53206.943023
20:48:45 (2667932): called boinc_finish(0)

</stderr_txt>
]]>

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