Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:05:14 (12487): wrapper (7.7.26015): starting
13:05:14 (12487): wrapper: running run_atlas (--nthreads 8)
[2026-03-10 13:05:14] Arguments: --nthreads 8
[2026-03-10 13:05:14] Threads: 8
[2026-03-10 13:05:14] Checking for CVMFS
[2026-03-10 13:05:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-10 13:05:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-10 13:05:15] Running cvmfs_config stat atlas.cern.ch
[2026-03-10 13:05:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-10 13:05:15] 2.11.2.0 2466 267707 150716 157123 3 3 14759854 18432000 1833 130560 0 172708955 99.982 10026899 27420 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-10 13:05:15] CVMFS is ok
[2026-03-10 13:05:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 13:05:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 13:05:15] Further information can be found at the LHC@home message board.
[2026-03-10 13:05:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 13:05:15] Checking for apptainer binary...
[2026-03-10 13:05:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-10 13:05:15] Running /usr/bin/apptainer --version
[2026-03-10 13:05:15] apptainer version 1.3.2-1.el7
[2026-03-10 13:05:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 13:05:16] c-206-20.aglt2.org
[2026-03-10 13:05:16] apptainer works
[2026-03-10 13:05:16] Set ATHENA_PROC_NUMBER=8
[2026-03-10 13:05:16] Set ATHENA_CORE_NUMBER=8
[2026-03-10 13:05:16] Starting ATLAS job with PandaID=7036000420
[2026-03-10 13:05:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 21:09:25]  *** The last 200 lines of the pilot log: ***
[2026-03-10 21:09:25] 2026-03-11 01:08:18,435 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 21:09:25] 2026-03-11 01:08:18,441 | INFO     | fitting pss+swap vs Time
[2026-03-10 21:09:25] 2026-03-11 01:08:18,441 | INFO     | sum of square deviations: 33232064950.0
[2026-03-10 21:09:25] 2026-03-11 01:08:18,446 | INFO     | sum of deviations: 117525237396.0
[2026-03-10 21:09:25] 2026-03-11 01:08:18,446 | INFO     | mean x: 1773176799.0
[2026-03-10 21:09:25] 2026-03-11 01:08:18,446 | INFO     | mean y: 2466044.852631579
[2026-03-10 21:09:25] 2026-03-11 01:08:18,446 | INFO     | intersect: -6268375823.117249
[2026-03-10 21:09:25] 2026-03-11 01:08:18,447 | INFO     | chi2: 1.3819453751307234
[2026-03-10 21:09:25] 2026-03-11 01:08:18,447 | INFO     | sum of square deviations: 32193636177.5
[2026-03-10 21:09:25] 2026-03-11 01:08:18,451 | INFO     | sum of deviations: 115621734927.5
[2026-03-10 21:09:25] 2026-03-11 01:08:18,452 | INFO     | mean x: 1773176646.5
[2026-03-10 21:09:25] 2026-03-11 01:08:18,452 | INFO     | mean y: 2465765.3638297874
[2026-03-10 21:09:25] 2026-03-11 01:08:18,452 | INFO     | intersect: -6365804009.162057
[2026-03-10 21:09:25] 2026-03-11 01:08:18,452 | INFO     | chi2: 1.3819893777919448
[2026-03-10 21:09:25] 2026-03-11 01:08:18,452 | INFO     | current chi2=1.3819893777919448 (change=-0.003184110024409324 %)
[2026-03-10 21:09:25] 2026-03-11 01:08:18,453 | INFO     | right removable region: 469
[2026-03-10 21:09:25] 2026-03-11 01:08:18,453 | INFO     | sum of square deviations: 32193636177.5
[2026-03-10 21:09:25] 2026-03-11 01:08:18,457 | INFO     | sum of deviations: 50278648387.50001
[2026-03-10 21:09:25] 2026-03-11 01:08:18,457 | INFO     | mean x: 1773176951.5
[2026-03-10 21:09:25] 2026-03-11 01:08:18,458 | INFO     | mean y: 2475874.2021276597
[2026-03-10 21:09:25] 2026-03-11 01:08:18,458 | INFO     | intersect: -2766796288.213508
[2026-03-10 21:09:25] 2026-03-11 01:08:18,458 | INFO     | chi2: 0.10831378448730114
[2026-03-10 21:09:25] 2026-03-11 01:08:18,458 | INFO     | current chi2=0.10831378448730114 (change=92.16222388840403 %)
[2026-03-10 21:09:25] 2026-03-11 01:08:18,459 | INFO     | sum of square deviations: 31177068280.0
[2026-03-10 21:09:25] 2026-03-11 01:08:18,463 | INFO     | sum of deviations: 26786234294.999954
[2026-03-10 21:09:25] 2026-03-11 01:08:18,463 | INFO     | mean x: 1773177104.0
[2026-03-10 21:09:25] 2026-03-11 01:08:18,463 | INFO     | mean y: 2479400.4258064516
[2026-03-10 21:09:25] 2026-03-11 01:08:18,463 | INFO     | intersect: -1520971647.8801856
[2026-03-10 21:09:25] 2026-03-11 01:08:18,464 | INFO     | chi2: 0.026068712432598465
[2026-03-10 21:09:25] 2026-03-11 01:08:18,464 | INFO     | current chi2=0.026068712432598465 (change=75.9322300887245 %)
[2026-03-10 21:09:25] 2026-03-11 01:08:18,464 | INFO     | sum of square deviations: 30182128695.0
[2026-03-10 21:09:25] 2026-03-11 01:08:18,468 | INFO     | sum of deviations: 18702702754.499985
[2026-03-10 21:09:25] 2026-03-11 01:08:18,468 | INFO     | mean x: 1773177256.5
[2026-03-10 21:09:25] 2026-03-11 01:08:18,469 | INFO     | mean y: 2480633.1326086954
[2026-03-10 21:09:25] 2026-03-11 01:08:18,469 | INFO     | intersect: -1096289022.728448
[2026-03-10 21:09:25] 2026-03-11 01:08:18,469 | INFO     | chi2: 0.003447169022068745
[2026-03-10 21:09:25] 2026-03-11 01:08:18,469 | INFO     | current chi2=0.003447169022068745 (change=86.77660421096164 %)
[2026-03-10 21:09:25] 2026-03-11 01:08:18,470 | INFO     | sum of square deviations: 29208584860.0
[2026-03-10 21:09:25] 2026-03-11 01:08:18,474 | INFO     | sum of deviations: 16905396710.999989
[2026-03-10 21:09:25] 2026-03-11 01:08:18,474 | INFO     | mean x: 1773177409.0
[2026-03-10 21:09:25] 2026-03-11 01:08:18,474 | INFO     | mean y: 2480914.1472527473
[2026-03-10 21:09:25] 2026-03-11 01:08:18,474 | INFO     | intersect: -1023801861.338368
[2026-03-10 21:09:25] 2026-03-11 01:08:18,475 | INFO     | chi2: 0.003146194164605503
[2026-03-10 21:09:25] 2026-03-11 01:08:18,475 | INFO     | current chi2=0.003146194164605503 (change=8.731073397805673 %)
[2026-03-10 21:09:25] 2026-03-11 01:08:18,475 | INFO     | left removable region: 40
[2026-03-10 21:09:25] 2026-03-11 01:08:18,475 | INFO     | sum of square deviations: 24482059030.0
[2026-03-10 21:09:25] 2026-03-11 01:08:18,479 | INFO     | sum of deviations: 17872041262.999996
[2026-03-10 21:09:25] 2026-03-11 01:08:18,479 | INFO     | mean x: 1773177836.0
[2026-03-10 21:09:25] 2026-03-11 01:08:18,479 | INFO     | mean y: 2480431.3076923075
[2026-03-10 21:09:25] 2026-03-11 01:08:18,479 | INFO     | intersect: -1291949396.3794374
[2026-03-10 21:09:25] 2026-03-11 01:08:18,480 | INFO     | chi2: 0.001955662043798075
[2026-03-10 21:09:25] 2026-03-11 01:08:18,480 | INFO     | current memory leak: 0.73 B/s (using 429 data points, chi2=0.00)
[2026-03-10 21:09:25] 2026-03-11 01:08:18,481 | INFO     | could have reported an average CPU frequency of 2444 MHz (20 samples)
[2026-03-10 21:09:25] 2026-03-11 01:08:18,481 | INFO     | ..............................
[2026-03-10 21:09:25] 2026-03-11 01:08:18,481 | INFO     | . Timing measurements:
[2026-03-10 21:09:25] 2026-03-11 01:08:18,481 | INFO     | . get job = 0 s
[2026-03-10 21:09:25] 2026-03-11 01:08:18,481 | INFO     | . initial setup = 6 s
[2026-03-10 21:09:25] 2026-03-11 01:08:18,481 | INFO     | . payload setup = 4 s
[2026-03-10 21:09:25] 2026-03-11 01:08:18,481 | INFO     | . stage-in = 0 s
[2026-03-10 21:09:25] 2026-03-11 01:08:18,481 | INFO     | . payload execution = 28952 s
[2026-03-10 21:09:25] 2026-03-11 01:08:18,481 | INFO     | . stage-out = 2 s
[2026-03-10 21:09:25] 2026-03-11 01:08:18,482 | INFO     | . log creation = 0 s
[2026-03-10 21:09:25] 2026-03-11 01:08:18,482 | INFO     | ..............................
[2026-03-10 21:09:25] 2026-03-11 01:08:18,861 | INFO     | 
[2026-03-10 21:09:25] 2026-03-11 01:08:18,862 | INFO     | job summary report
[2026-03-10 21:09:25] 2026-03-11 01:08:18,862 | INFO     | --------------------------------------------------
[2026-03-10 21:09:25] 2026-03-11 01:08:18,862 | INFO     | PanDA job id: 7036000420
[2026-03-10 21:09:25] 2026-03-11 01:08:18,862 | INFO     | task id: 48847157
[2026-03-10 21:09:25] 2026-03-11 01:08:18,862 | INFO     | errors: (none)
[2026-03-10 21:09:25] 2026-03-11 01:08:18,862 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 21:09:25] 2026-03-11 01:08:18,862 | INFO     | pilot state: finished 
[2026-03-10 21:09:25] 2026-03-11 01:08:18,862 | INFO     | transexitcode: 0
[2026-03-10 21:09:25] 2026-03-11 01:08:18,862 | INFO     | exeerrorcode: 0
[2026-03-10 21:09:25] 2026-03-11 01:08:18,863 | INFO     | exeerrordiag: 
[2026-03-10 21:09:25] 2026-03-11 01:08:18,863 | INFO     | exitcode: 0
[2026-03-10 21:09:25] 2026-03-11 01:08:18,863 | INFO     | exitmsg: OK
[2026-03-10 21:09:25] 2026-03-11 01:08:18,863 | INFO     | cpuconsumptiontime: 221596 s
[2026-03-10 21:09:25] 2026-03-11 01:08:18,863 | INFO     | nevents: 400
[2026-03-10 21:09:25] 2026-03-11 01:08:18,863 | INFO     | neventsw: 0
[2026-03-10 21:09:25] 2026-03-11 01:08:18,863 | INFO     | pid: 20557
[2026-03-10 21:09:25] 2026-03-11 01:08:18,863 | INFO     | pgrp: 20557
[2026-03-10 21:09:25] 2026-03-11 01:08:18,863 | INFO     | corecount: 8
[2026-03-10 21:09:25] 2026-03-11 01:08:18,863 | INFO     | event service: False
[2026-03-10 21:09:25] 2026-03-11 01:08:18,864 | INFO     | sizes: {0: 2279194, 1: 2280312, 2: 2280312, 28960: 2317602, 28964: 2326656, 28966: 2326794}
[2026-03-10 21:09:25] 2026-03-11 01:08:18,864 | INFO     | --------------------------------------------------
[2026-03-10 21:09:25] 2026-03-11 01:08:18,864 | INFO     | 
[2026-03-10 21:09:25] 2026-03-11 01:08:18,864 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-10 21:09:25] 2026-03-11 01:08:18,872 | INFO     | time since job start (28967s) is within the limit (349056.0s)
[2026-03-10 21:09:25] 2026-03-11 01:08:18,879 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 21:09:25] 2026-03-11 01:08:18,879 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 21:09:25] 2026-03-11 01:08:18,880 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 21:09:25] 2026-03-11 01:08:18,880 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 21:09:25] 2026-03-11 01:08:18,880 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 21:09:25] 2026-03-11 01:08:18,880 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 21:09:25] 2026-03-11 01:08:18,880 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 21:09:25] 2026-03-11 01:08:18,880 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 21:09:25] 2026-03-11 01:08:18,880 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 21:09:25] 2026-03-11 01:08:18,880 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 21:09:25] 2026-03-11 01:08:18,880 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 21:09:25] 2026-03-11 01:08:18,880 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 21:09:25] 2026-03-11 01:08:18,881 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 21:09:25] 2026-03-11 01:08:18,881 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 21:09:25] 2026-03-11 01:08:18,881 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 21:09:25] 2026-03-11 01:08:18,881 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 21:09:25] 2026-03-11 01:08:18,881 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 21:09:25] 2026-03-11 01:08:18,881 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 21:09:25] 2026-03-11 01:08:18,881 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 21:09:25] 2026-03-11 01:08:18,881 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 21:09:25] 2026-03-11 01:08:18,882 | INFO     | job 7036000420 has completed (purged errors)
[2026-03-10 21:09:25] 2026-03-11 01:08:18,882 | INFO     | overall cleanup function is called
[2026-03-10 21:09:25] 2026-03-11 01:08:19,887 | INFO     | --- collectZombieJob: --- 10, [20557]
[2026-03-10 21:09:25] 2026-03-11 01:08:19,887 | INFO     | zombie collector waiting for pid 20557
[2026-03-10 21:09:25] 2026-03-11 01:08:19,887 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 21:09:25] 2026-03-11 01:08:19,888 | INFO     | collected zombie processes
[2026-03-10 21:09:25] 2026-03-11 01:08:19,888 | INFO     | will attempt to kill all subprocesses of pid=20557
[2026-03-10 21:09:25] 2026-03-11 01:08:20,116 | INFO     | PID=16158 has CPU usage=8.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-10 21:09:25] 2026-03-11 01:08:20,117 | INFO     | .. there are 2 such processes running
[2026-03-10 21:09:25] 2026-03-11 01:08:20,123 | INFO     | process IDs to be killed: [20557] (in reverse order)
[2026-03-10 21:09:25] 2026-03-11 01:08:20,161 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 21:09:25] 2026-03-11 01:08:20,162 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 21:09:25] 2026-03-11 01:08:20,164 | INFO     | did not find any defunct processes belonging to 20557
[2026-03-10 21:09:25] 2026-03-11 01:08:20,167 | INFO     | did not find any defunct processes belonging to 20557
[2026-03-10 21:09:25] 2026-03-11 01:08:20,167 | INFO     | ready for new job
[2026-03-10 21:09:25] 2026-03-11 01:08:20,167 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 21:09:25] 2026-03-11 01:08:20,169 | INFO     | **************************************
[2026-03-10 21:09:25] 2026-03-11 01:08:20,169 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 21:09:25] 2026-03-11 01:08:20,169 | INFO     | **************************************
[2026-03-10 21:09:25] 2026-03-11 01:08:20,170 | INFO     | 
[2026-03-10 21:09:25] 2026-03-11 01:08:20,170 | INFO     | architecture information:
[2026-03-10 21:09:25] 2026-03-11 01:08:20,171 | INFO     | executing command: cat /etc/os-release
[2026-03-10 21:09:25] 2026-03-11 01:08:20,181 | INFO     | cat /etc/os-release:
[2026-03-10 21:09:25] NAME="CentOS Linux"
[2026-03-10 21:09:25] VERSION="7 (Core)"
[2026-03-10 21:09:25] ID="centos"
[2026-03-10 21:09:25] ID_LIKE="rhel fedora"
[2026-03-10 21:09:25] VERSION_ID="7"
[2026-03-10 21:09:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 21:09:25] ANSI_COLOR="0;31"
[2026-03-10 21:09:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 21:09:25] HOME_URL="https://www.centos.org/"
[2026-03-10 21:09:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 21:09:25] 
[2026-03-10 21:09:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 21:09:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 21:09:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 21:09:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 21:09:25] 
[2026-03-10 21:09:25] 2026-03-11 01:08:20,181 | INFO     | **************************************
[2026-03-10 21:09:25] 2026-03-11 01:08:20,684 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-10 21:09:25] 2026-03-11 01:08:20,695 | INFO     | sufficient remaining disk space (28245491712 B)
[2026-03-10 21:09:25] 2026-03-11 01:08:20,695 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 21:09:25] 2026-03-11 01:08:20,696 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 21:09:25] 2026-03-11 01:08:20,696 | INFO     | update_server=False
[2026-03-10 21:09:25] 2026-03-11 01:08:20,696 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 21:09:25] 2026-03-11 01:08:20,696 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 21:09:25] 2026-03-11 01:08:20,696 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-10 21:09:25] 2026-03-11 01:08:20,696 | INFO     | aborting loop
[2026-03-10 21:09:25] 2026-03-11 01:08:20,697 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 21:09:25] 2026-03-11 01:08:20,697 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 21:09:25] 2026-03-11 01:08:20,697 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 21:09:25] 2026-03-11 01:08:20,700 | INFO     | all data control threads have been joined
[2026-03-10 21:09:25] 2026-03-11 01:08:21,494 | INFO     | all payload control threads have been joined
[2026-03-10 21:09:25] 2026-03-11 01:08:21,701 | INFO     | [job] retrieve thread has finished
[2026-03-10 21:09:25] 2026-03-11 01:08:21,702 | INFO     | [job] job monitor thread has finished
[2026-03-10 21:09:25] 2026-03-11 01:08:21,705 | INFO     | [data] control thread has finished
[2026-03-10 21:09:25] 2026-03-11 01:08:21,955 | INFO     | [payload] validate_post thread has finished
[2026-03-10 21:09:25] 2026-03-11 01:08:22,010 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 21:09:25] 2026-03-11 01:08:22,036 | INFO     | all job control threads have been joined
[2026-03-10 21:09:25] 2026-03-11 01:08:22,228 | INFO     | [payload] failed_post thread has finished
[2026-03-10 21:09:25] 2026-03-11 01:08:22,499 | INFO     | [payload] control thread has finished
[2026-03-10 21:09:25] 2026-03-11 01:08:22,652 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 21:09:25] 2026-03-11 01:08:22,739 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 21:09:25] 2026-03-11 01:08:22,775 | INFO     | [job] validate thread has finished
[2026-03-10 21:09:25] 2026-03-11 01:08:22,775 | INFO     | [data] copytool_in thread has finished
[2026-03-10 21:09:25] 2026-03-11 01:08:22,815 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 21:09:25] 2026-03-11 01:08:22,863 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 21:09:25] 2026-03-11 01:08:23,042 | INFO     | [job] control thread has finished
[2026-03-10 21:09:25] 2026-03-11 01:08:23,077 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 21:09:25] 2026-03-11 01:08:23,565 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 21:09:25] 2026-03-11 01:08:24,016 | INFO     | [data] copytool_out thread has finished
[2026-03-10 21:09:25] 2026-03-11 01:08:24,570 | INFO     | [job] queue monitor thread has finished
[2026-03-10 21:09:25] 2026-03-11 01:08:26,658 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 21:09:25] 2026-03-11 01:09:18,202 | INFO     | [monitor] cgroup control has ended
[2026-03-10 21:09:25] 2026-03-11 01:09:19,972 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140233871042368)>', '<ExcThread(monitor, started 140233299457792)>']
[2026-03-10 21:09:25] 2026-03-11 01:09:19,982 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 21:09:25] 2026-03-11 01:09:19,983 | INFO     | [monitor] control thread has ended
[2026-03-10 21:09:25] 2026-03-11 01:09:24,997 | INFO     | all workflow threads have been joined
[2026-03-10 21:09:25] 2026-03-11 01:09:24,998 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 21:09:25] 2026-03-11 01:09:24,998 | INFO     | traces error code: 0
[2026-03-10 21:09:25] 2026-03-11 01:09:24,999 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 21:09:25] 2026-03-11 01:09:25,118 [wrapper] ==== pilot stdout END ====
[2026-03-10 21:09:25] 2026-03-11 01:09:25,120 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 21:09:25] 2026-03-11 01:09:25,123 [wrapper] pilotpid: 16158
[2026-03-10 21:09:25] 2026-03-11 01:09:25,125 [wrapper] Pilot exit status: 0
[2026-03-10 21:09:25] 2026-03-11 01:09:25,135 [wrapper] pandaids: 7036000420
[2026-03-10 21:09:25] 2026-03-11 01:09:25,163 [wrapper] cleanup supervisor_pilot 11265 16159
[2026-03-10 21:09:25] 2026-03-11 01:09:25,165 [wrapper] Test setup, not cleaning
[2026-03-10 21:09:25] 2026-03-11 01:09:25,168 [wrapper] apfmon messages muted
[2026-03-10 21:09:25] 2026-03-11 01:09:25,170 [wrapper] ==== wrapper stdout END ====
[2026-03-10 21:09:25] 2026-03-11 01:09:25,172 [wrapper] ==== wrapper stderr END ====
[2026-03-10 21:09:25]  *** Error codes and diagnostics ***
[2026-03-10 21:09:25]     "exeErrorCode": 0,
[2026-03-10 21:09:25]     "exeErrorDiag": "",
[2026-03-10 21:09:25]     "pilotErrorCode": 0,
[2026-03-10 21:09:25]     "pilotErrorDiag": "",
[2026-03-10 21:09:25]  *** Listing of results directory ***
[2026-03-10 21:09:25] total 418024
[2026-03-10 21:09:25] -rw-r--r-- 1 boincer umatlas      5111 Mar  2 08:57 queuedata.json
[2026-03-10 21:09:25] -rw-r--r-- 1 boincer umatlas    584627 Mar  2 08:57 pilot3.tar.gz
[2026-03-10 21:09:25] -rwx------ 1 boincer umatlas     36322 Mar  2 08:57 runpilot2-wrapper.sh
[2026-03-10 21:09:25] -rw-r--r-- 1 boincer umatlas       100 Mar 10 13:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 21:09:25] -rwxr-xr-x 1 boincer umatlas      7986 Mar 10 13:05 run_atlas
[2026-03-10 21:09:25] -rw-r--r-- 1 boincer umatlas       105 Mar 10 13:05 job.xml
[2026-03-10 21:09:25] -rw-r--r-- 2 boincer umatlas 209592254 Mar 10 13:05 EVNT.48453086._000003.pool.root.1
[2026-03-10 21:09:25] -rw-r--r-- 2 boincer umatlas     15845 Mar 10 13:05 start_atlas.sh
[2026-03-10 21:09:25] drwxrwx--x 2 boincer umatlas      4096 Mar 10 13:05 shared
[2026-03-10 21:09:25] -rw-r--r-- 2 boincer umatlas    597956 Mar 10 13:05 input.tar.gz
[2026-03-10 21:09:25] -rw-r--r-- 1 boincer umatlas         0 Mar 10 13:05 boinc_lockfile
[2026-03-10 21:09:25] -rw-r--r-- 1 boincer umatlas      2598 Mar 10 13:05 pandaJob.out
[2026-03-10 21:09:25] -rw------- 1 boincer umatlas        57 Mar 10 13:05 setup.sh.local
[2026-03-10 21:09:25] -rw------- 1 boincer umatlas   1006702 Mar 10 13:05 agis_schedconf.cvmfs.json
[2026-03-10 21:09:25] -rw------- 1 boincer umatlas       445 Mar 10 13:05 workernode_map.json
[2026-03-10 21:09:25] drwx------ 5 boincer umatlas      4096 Mar 10 13:05 pilot3
[2026-03-10 21:09:25] -rw-r--r-- 1 boincer umatlas      5952 Mar 10 21:02 init_data.xml
[2026-03-10 21:09:25] -rw------- 1 boincer umatlas 205158365 Mar 10 21:07 HITS.48847157._000053.pool.root.1
[2026-03-10 21:09:25] -rw------- 1 boincer umatlas        95 Mar 10 21:07 pilot_heartbeat.json
[2026-03-10 21:09:25] -rw-r--r-- 1 boincer umatlas       531 Mar 10 21:08 boinc_task_state.xml
[2026-03-10 21:09:25] -rw------- 1 boincer umatlas      1052 Mar 10 21:08 memory_monitor_summary.json
[2026-03-10 21:09:25] -rw------- 1 boincer umatlas   1511578 Mar 10 21:08 agis_ddmendpoints.agis.ALL.json
[2026-03-10 21:09:25] -rw------- 1 boincer umatlas    660686 Mar 10 21:08 log.48847157._000053.job.log.tgz.1
[2026-03-10 21:09:25] -rw------- 1 boincer umatlas      6415 Mar 10 21:08 heartbeat.json
[2026-03-10 21:09:25] -rw-r--r-- 1 boincer umatlas      8192 Mar 10 21:09 boinc_mmap_file
[2026-03-10 21:09:25] -rw-r--r-- 1 boincer umatlas        29 Mar 10 21:09 wrapper_checkpoint.txt
[2026-03-10 21:09:25] -rw------- 1 boincer umatlas      4548 Mar 10 21:09 pilotlog.txt
[2026-03-10 21:09:25] -rw------- 1 boincer umatlas   4025314 Mar 10 21:09 log.48847157._000053.job.log.1
[2026-03-10 21:09:25] -rw------- 1 boincer umatlas       357 Mar 10 21:09 output.list
[2026-03-10 21:09:25] -rw-r--r-- 1 boincer umatlas       620 Mar 10 21:09 runtime_log
[2026-03-10 21:09:25] -rw------- 1 boincer umatlas   4700160 Mar 10 21:09 result.tar.gz
[2026-03-10 21:09:25] -rw-r--r-- 1 boincer umatlas      9342 Mar 10 21:09 runtime_log.err
[2026-03-10 21:09:25] -rw------- 1 boincer umatlas       664 Mar 10 21:09 MJ3KDmixIH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmDVDLDmt6tifm.diag
[2026-03-10 21:09:25] -rw-r--r-- 1 boincer umatlas     20951 Mar 10 21:09 stderr.txt
[2026-03-10 21:09:25] HITS file was successfully produced:
[2026-03-10 21:09:25] -rw------- 1 boincer umatlas 205158365 Mar 10 21:07 shared/HITS.pool.root.1
[2026-03-10 21:09:25]  *** Contents of shared directory: ***
[2026-03-10 21:09:25] total 410228
[2026-03-10 21:09:25] -rw-r--r-- 2 boincer umatlas 209592254 Mar 10 13:05 ATLAS.root_0
[2026-03-10 21:09:25] -rw-r--r-- 2 boincer umatlas     15845 Mar 10 13:05 start_atlas.sh
[2026-03-10 21:09:25] -rw-r--r-- 2 boincer umatlas    597956 Mar 10 13:05 input.tar.gz
[2026-03-10 21:09:25] -rw------- 1 boincer umatlas 205158365 Mar 10 21:07 HITS.pool.root.1
[2026-03-10 21:09:25] -rw------- 1 boincer umatlas   4700160 Mar 10 21:09 result.tar.gz
21:09:27 (12487): run_atlas exited; CPU time 222043.117365
21:09:27 (12487): called boinc_finish(0)

</stderr_txt>
]]>

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