Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:03:06 (3781702): wrapper (7.7.26015): starting
14:03:06 (3781702): wrapper: running run_atlas (--nthreads 12)
[2026-03-10 14:03:06] Arguments: --nthreads 12
[2026-03-10 14:03:06] Threads: 12
[2026-03-10 14:03:06] Checking for CVMFS
[2026-03-10 14:03:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-10 14:03:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-10 14:03:07] Running cvmfs_config stat atlas.cern.ch
[2026-03-10 14:03:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-10 14:03:09] 2.11.5.0 851180 79473 245396 157129 3 281 45147683 45568001 15708 130560 0 648846670 99.822 348128918 23259 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-03-10 14:03:09] CVMFS is ok
[2026-03-10 14:03:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 14:03:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 14:03:09] Further information can be found at the LHC@home message board.
[2026-03-10 14:03:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 14:03:09] Checking for apptainer binary...
[2026-03-10 14:03:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-10 14:03:09] Running /usr/bin/apptainer --version
[2026-03-10 14:03:09] apptainer version 1.4.1-1.el9
[2026-03-10 14:03:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 14:03:10] wns0030.triumf.lcg
[2026-03-10 14:03:10] apptainer works
[2026-03-10 14:03:10] Set ATHENA_PROC_NUMBER=12
[2026-03-10 14:03:10] Set ATHENA_CORE_NUMBER=12
[2026-03-10 14:03:10] Starting ATLAS job with PandaID=7049147247
[2026-03-10 14:03:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 14:09:43]  *** The last 200 lines of the pilot log: ***
[2026-03-10 14:09:43] 2026-03-10 21:08:35,818 | WARNING  | wrong length of table data, x=[1773176740.0], y=[1862.0] (must be same and length>=4)
[2026-03-10 14:09:43] 2026-03-10 21:08:35,818 | INFO     | could have reported an average CPU frequency of 2099 MHz (4 samples)
[2026-03-10 14:09:43] 2026-03-10 21:08:35,818 | INFO     | ..............................
[2026-03-10 14:09:43] 2026-03-10 21:08:35,818 | INFO     | . Timing measurements:
[2026-03-10 14:09:43] 2026-03-10 21:08:35,819 | INFO     | . get job = 0 s
[2026-03-10 14:09:43] 2026-03-10 21:08:35,819 | INFO     | . initial setup = 32 s
[2026-03-10 14:09:43] 2026-03-10 21:08:35,819 | INFO     | . payload setup = 24 s
[2026-03-10 14:09:43] 2026-03-10 21:08:35,819 | INFO     | . stage-in = 0 s
[2026-03-10 14:09:43] 2026-03-10 21:08:35,819 | INFO     | . payload execution = 88 s
[2026-03-10 14:09:43] 2026-03-10 21:08:35,819 | INFO     | . stage-out = 0 s
[2026-03-10 14:09:43] 2026-03-10 21:08:35,819 | INFO     | . log creation = 0 s
[2026-03-10 14:09:43] 2026-03-10 21:08:35,819 | INFO     | ..............................
[2026-03-10 14:09:43] 2026-03-10 21:08:35,819 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-10 14:09:43] 2026-03-10 21:08:35,819 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7049147247/pilotlog.txt
[2026-03-10 14:09:43] 2026-03-10 21:08:35,822 | INFO     | time since job start (240s) is within the limit (349056.0s)
[2026-03-10 14:09:43] 2026-03-10 21:08:35,991 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-10 14:09:43] - Log from pilotlog.txt -
[2026-03-10 14:09:43] 2026-03-10 21:08:35,817 | INFO     | extracted standard info from prmon json
[2026-03-10 14:09:43] 2026-03-10 21:08:35,817 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 14:09:43] 2026-03-10 21:08:35,817 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 14:09:43] 2026-03-10 21:08:35,818 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 14:09:43] 2026-03-10 21:08:35,818 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 14:09:43] 2026-03-10 21:08:35,818 | WARNING  | wrong length of table data, x=[1773176740.0], y=[1862.0] (must be same and length>=4)
[2026-03-10 14:09:43] 2026-03-10 21:08:35,818 | INFO     | could have reported an average CPU frequency of 2099 MHz (4 samples)
[2026-03-10 14:09:43] 2026-03-10 21:08:35,818 | INFO     | ..............................
[2026-03-10 14:09:43] 2026-03-10 21:08:35,818 | INFO     | . Timing measurements:
[2026-03-10 14:09:43] 2026-03-10 21:08:35,819 | INFO     | . get job = 0 s
[2026-03-10 14:09:43] 2026-03-10 21:08:35,819 | INFO     | . initial setup = 32 s
[2026-03-10 14:09:43] 2026-03-10 21:08:35,819 | INFO     | . payload setup = 24 s
[2026-03-10 14:09:43] 2026-03-10 21:08:35,819 | INFO     | . stage-in = 0 s
[2026-03-10 14:09:43] 2026-03-10 21:08:35,819 | INFO     | . payload execution = 88 s
[2026-03-10 14:09:43] 2026-03-10 21:08:35,819 | INFO     | . stage-out = 0 s
[2026-03-10 14:09:43] 2026-03-10 21:08:35,819 | INFO     | . log creation = 0 s
[2026-03-10 14:09:43] 2026-03-10 21:08:35,819 | INFO     | ..............................
[2026-03-10 14:09:43] 2026-03-10 21:08:35,819 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-10 14:09:43] 2026-03-10 21:08:35,819 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7049147247/pilotlog.txt
[2026-03-10 14:09:43] 2026-03-10 21:08:35,822 | INFO     | time since job start (240s) is within the limit (349056.0s)
[2026-03-10 14:09:43] 2026-03-10 21:08:35,991 | WARNING  | 
[2026-03-10 14:09:43] [begin log extracts]
[2026-03-10 14:09:43] - Log from pilotlog.txt -
[2026-03-10 14:09:43] 2026-03-10 21:08:35,817 | INFO     | extracted standard info from prmon json
[2026-03-10 14:09:43] 2026-03-10 21:08:35,817 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 14:09:43] 2026-03-10 21:08:35,817 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 14:09:43] 2026-03-10 21:08:35,818 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 14:09:43] 2026-03-10 21:08:35,818 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 14:09:43] 2026-03-10 21:08:35,818 | WARNING  | wrong length of table data, x=[1773176740.0], y=[1862.0] (must be same and length>=4)
[2026-03-10 14:09:43] 2026-03-10 21:08:35,818 | INFO     | could have reported an average CPU frequency of 2099 MHz (4 samples)
[2026-03-10 14:09:43] 2026-03-10 21:08:35,818 | INFO     | ..............................
[2026-03-10 14:09:43] 2026-03-10 21:08:35,818 | INFO     | . Timing measurements:
[2026-03-10 14:09:43] 2026-03-10 21:08:35,819 | INFO     | . get job = 0 s
[2026-03-10 14:09:43] 2026-03-10 21:08:35,819 | INFO     | . initial setup = 32 s
[2026-03-10 14:09:43] 2026-03-10 21:08:35,819 | INFO     | . payload setup = 24 s
[2026-03-10 14:09:43] 2026-03-10 21:08:35,819 | INFO     | . stage-in = 0 s
[2026-03-10 14:09:43] 2026-03-10 21:08:35,819 | INFO     | . payload execution = 88 s
[2026-03-10 14:09:43] 2026-03-10 21:08:35,819 | INFO     | . stage-out = 0 s
[2026-03-10 14:09:43] 2026-03-10 21:08:35,819 | INFO     | . log creation = 0 s
[2026-03-10 14:09:43] 2026-03-10 21:08:35,819 | INFO     | ..............................
[2026-03-10 14:09:43] 2026-03-10 21:08:35,819 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-10 14:09:43] 2026-03-10 21:08:35,819 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7049147247/pilotlog.txt
[2026-03-10 14:09:43] 2026-03-10 21:08:35,822 | INFO     | time since job start (240s) is within the limit (349056.0s)
[2026-03-10 14:09:43] [end log extracts]
[2026-03-10 14:09:43] 2026-03-10 21:08:35,991 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-10 14:09:43] 2026-03-10 21:08:35,992 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-10 14:09:43] 2026-03-10 21:08:36,714 | INFO     | 
[2026-03-10 14:09:43] 2026-03-10 21:08:36,714 | INFO     | job summary report
[2026-03-10 14:09:43] 2026-03-10 21:08:36,714 | INFO     | --------------------------------------------------
[2026-03-10 14:09:43] 2026-03-10 21:08:36,714 | INFO     | PanDA job id: 7049147247
[2026-03-10 14:09:43] 2026-03-10 21:08:36,714 | INFO     | task id: 48967030
[2026-03-10 14:09:43] 2026-03-10 21:08:36,714 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-10 14:06:26,109 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-10 14:09:43] 2026-03-10 21:08:36,714 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 14:09:43] 2026-03-10 21:08:36,714 | INFO     | pilot state: failed 
[2026-03-10 14:09:43] 2026-03-10 21:08:36,714 | INFO     | transexitcode: 65
[2026-03-10 14:09:43] 2026-03-10 21:08:36,714 | INFO     | exeerrorcode: 65
[2026-03-10 14:09:43] 2026-03-10 21:08:36,714 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-10 14:09:43] 2026-03-10 21:08:36,714 | INFO     | exitcode: 65
[2026-03-10 14:09:43] 2026-03-10 21:08:36,714 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-10 14:09:43] 2026-03-10 21:08:36,714 | INFO     | cpuconsumptiontime: 16 s
[2026-03-10 14:09:43] 2026-03-10 21:08:36,715 | INFO     | nevents: 0
[2026-03-10 14:09:43] 2026-03-10 21:08:36,715 | INFO     | neventsw: 0
[2026-03-10 14:09:43] 2026-03-10 21:08:36,715 | INFO     | pid: 3790127
[2026-03-10 14:09:43] 2026-03-10 21:08:36,715 | INFO     | pgrp: 3790127
[2026-03-10 14:09:43] 2026-03-10 21:08:36,715 | INFO     | corecount: 12
[2026-03-10 14:09:43] 2026-03-10 21:08:36,715 | INFO     | event service: False
[2026-03-10 14:09:43] 2026-03-10 21:08:36,715 | INFO     | sizes: {0: 2279806, 1: 2279806, 2: 2280295, 3: 2280295, 117: 2303560, 119: 2307852, 121: 2308008, 238: 2308174}
[2026-03-10 14:09:43] 2026-03-10 21:08:36,715 | INFO     | --------------------------------------------------
[2026-03-10 14:09:43] 2026-03-10 21:08:36,715 | INFO     | 
[2026-03-10 14:09:43] 2026-03-10 21:08:36,715 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-10 14:09:43] 2026-03-10 21:08:36,935 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 14:09:43] 2026-03-10 21:08:36,935 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 14:09:43] 2026-03-10 21:08:36,935 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 14:09:43] 2026-03-10 21:08:36,936 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 14:09:43] 2026-03-10 21:08:36,936 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 14:09:43] 2026-03-10 21:08:36,936 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 14:09:43] 2026-03-10 21:08:36,936 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 14:09:43] 2026-03-10 21:08:36,936 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 14:09:43] 2026-03-10 21:08:36,936 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 14:09:43] 2026-03-10 21:08:36,937 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 14:09:43] 2026-03-10 21:08:36,937 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 14:09:43] 2026-03-10 21:08:36,937 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 14:09:43] 2026-03-10 21:08:36,937 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 14:09:43] 2026-03-10 21:08:36,937 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 14:09:43] 2026-03-10 21:08:36,937 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 14:09:43] 2026-03-10 21:08:36,937 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 14:09:43] 2026-03-10 21:08:36,937 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 14:09:43] 2026-03-10 21:08:36,937 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 14:09:43] 2026-03-10 21:08:36,937 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 14:09:43] 2026-03-10 21:08:36,937 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 14:09:43] 2026-03-10 21:08:36,937 | INFO     | job 7049147247 has completed (purged errors)
[2026-03-10 14:09:43] 2026-03-10 21:08:36,937 | INFO     | overall cleanup function is called
[2026-03-10 14:09:43] 2026-03-10 21:08:37,951 | INFO     | --- collectZombieJob: --- 10, [3790127]
[2026-03-10 14:09:43] 2026-03-10 21:08:37,951 | INFO     | zombie collector waiting for pid 3790127
[2026-03-10 14:09:43] 2026-03-10 21:08:37,951 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 14:09:43] 2026-03-10 21:08:37,951 | INFO     | collected zombie processes
[2026-03-10 14:09:43] 2026-03-10 21:08:37,951 | INFO     | will attempt to kill all subprocesses of pid=3790127
[2026-03-10 14:09:43] 2026-03-10 21:08:39,063 | INFO     | process IDs to be killed: [3790127] (in reverse order)
[2026-03-10 14:09:43] 2026-03-10 21:08:39,253 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 14:09:43] 2026-03-10 21:08:39,254 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 14:09:43] 2026-03-10 21:08:39,275 | INFO     | did not find any defunct processes belonging to 3790127
[2026-03-10 14:09:43] 2026-03-10 21:08:39,316 | INFO     | did not find any defunct processes belonging to 3790127
[2026-03-10 14:09:43] 2026-03-10 21:08:39,317 | INFO     | ready for new job
[2026-03-10 14:09:43] 2026-03-10 21:08:39,317 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 14:09:43] 2026-03-10 21:08:39,318 | INFO     | **************************************
[2026-03-10 14:09:43] 2026-03-10 21:08:39,318 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 14:09:43] 2026-03-10 21:08:39,319 | INFO     | **************************************
[2026-03-10 14:09:43] 2026-03-10 21:08:39,319 | INFO     | 
[2026-03-10 14:09:43] 2026-03-10 21:08:39,330 | INFO     | architecture information:
[2026-03-10 14:09:43] 2026-03-10 21:08:39,335 | INFO     | executing command: cat /etc/os-release
[2026-03-10 14:09:43] 2026-03-10 21:08:39,402 | INFO     | cat /etc/os-release:
[2026-03-10 14:09:43] NAME="CentOS Linux"
[2026-03-10 14:09:43] VERSION="7 (Core)"
[2026-03-10 14:09:43] ID="centos"
[2026-03-10 14:09:43] ID_LIKE="rhel fedora"
[2026-03-10 14:09:43] VERSION_ID="7"
[2026-03-10 14:09:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 14:09:43] ANSI_COLOR="0;31"
[2026-03-10 14:09:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 14:09:43] HOME_URL="https://www.centos.org/"
[2026-03-10 14:09:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 14:09:43] 
[2026-03-10 14:09:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 14:09:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 14:09:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 14:09:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 14:09:43] 
[2026-03-10 14:09:43] 2026-03-10 21:08:39,402 | INFO     | **************************************
[2026-03-10 14:09:43] 2026-03-10 21:08:39,906 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-10 14:09:43] 2026-03-10 21:08:40,161 | INFO     | sufficient remaining disk space (2105982058496 B)
[2026-03-10 14:09:43] 2026-03-10 21:08:40,161 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 14:09:43] 2026-03-10 21:08:40,161 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 14:09:43] 2026-03-10 21:08:40,162 | INFO     | update_server=False
[2026-03-10 14:09:43] 2026-03-10 21:08:40,162 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 14:09:43] 2026-03-10 21:08:40,358 | INFO     | all payload control threads have been joined
[2026-03-10 14:09:43] 2026-03-10 21:08:40,520 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-10 14:09:43] 2026-03-10 21:08:40,520 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-10 14:09:43] 2026-03-10 21:08:40,520 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 14:09:43] 2026-03-10 21:08:40,520 | INFO     | will abort loop
[2026-03-10 14:09:43] 2026-03-10 21:08:40,976 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 14:09:43] 2026-03-10 21:08:41,110 | INFO     | all data control threads have been joined
[2026-03-10 14:09:43] 2026-03-10 21:08:41,168 | INFO     | [job] retrieve thread has finished
[2026-03-10 14:09:43] 2026-03-10 21:08:41,301 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 14:09:43] 2026-03-10 21:08:41,364 | INFO     | [payload] control thread has finished
[2026-03-10 14:09:43] 2026-03-10 21:08:41,421 | INFO     | [job] validate thread has finished
[2026-03-10 14:09:43] 2026-03-10 21:08:41,528 | INFO     | [job] job monitor thread has finished
[2026-03-10 14:09:43] 2026-03-10 21:08:41,649 | INFO     | all job control threads have been joined
[2026-03-10 14:09:43] 2026-03-10 21:08:41,743 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 14:09:43] 2026-03-10 21:08:41,841 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 14:09:43] 2026-03-10 21:08:41,937 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 14:09:43] 2026-03-10 21:08:41,996 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 14:09:43] 2026-03-10 21:08:42,116 | INFO     | [data] control thread has finished
[2026-03-10 14:09:43] 2026-03-10 21:08:42,388 | INFO     | [data] copytool_in thread has finished
[2026-03-10 14:09:43] 2026-03-10 21:08:42,652 | INFO     | [payload] failed_post thread has finished
[2026-03-10 14:09:43] 2026-03-10 21:08:42,656 | INFO     | [job] control thread has finished
[2026-03-10 14:09:43] 2026-03-10 21:08:42,683 | INFO     | [payload] validate_post thread has finished
[2026-03-10 14:09:43] 2026-03-10 21:08:42,751 | INFO     | [job] queue monitor thread has finished
[2026-03-10 14:09:43] 2026-03-10 21:08:42,983 | INFO     | [data] copytool_out thread has finished
[2026-03-10 14:09:43] 2026-03-10 21:08:43,099 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 14:09:43] 2026-03-10 21:08:47,109 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 14:09:43] 2026-03-10 21:09:09,510 | INFO     | PID=3785502 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 14:09:43] 2026-03-10 21:09:09,510 | INFO     | .. there are 21 such processes running
[2026-03-10 14:09:43] 2026-03-10 21:09:09,511 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 14:09:43] 2026-03-10 21:09:09,511 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 14:09:43] 2026-03-10 21:09:09,511 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 14:09:43] 2026-03-10 21:09:35,021 | INFO     | [monitor] cgroup control has ended
[2026-03-10 14:09:43] 2026-03-10 21:09:36,288 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139623029679936)>', '<ExcThread(monitor, started 139622625548032)>']
[2026-03-10 14:09:43] 2026-03-10 21:09:36,671 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 14:09:43] 2026-03-10 21:09:36,672 | INFO     | [monitor] control thread has ended
[2026-03-10 14:09:43] 2026-03-10 21:09:41,314 | INFO     | all workflow threads have been joined
[2026-03-10 14:09:43] 2026-03-10 21:09:41,314 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 14:09:43] 2026-03-10 21:09:41,314 | INFO     | traces error code: 0
[2026-03-10 14:09:43] 2026-03-10 21:09:41,314 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 14:09:43] 2026-03-10 21:09:42,202 [wrapper] ==== pilot stdout END ====
[2026-03-10 14:09:43] 2026-03-10 21:09:42,255 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 14:09:43] 2026-03-10 21:09:42,316 [wrapper] pilotpid: 3785502
[2026-03-10 14:09:43] 2026-03-10 21:09:42,342 [wrapper] Pilot exit status: 0
[2026-03-10 14:09:43] 2026-03-10 21:09:42,445 [wrapper] pandaids: 7049147247
[2026-03-10 14:09:43] 2026-03-10 21:09:42,797 [wrapper] cleanup supervisor_pilot 3785508 3785503
[2026-03-10 14:09:43] 2026-03-10 21:09:42,813 [wrapper] Test setup, not cleaning
[2026-03-10 14:09:43] 2026-03-10 21:09:42,855 [wrapper] apfmon messages muted
[2026-03-10 14:09:43] 2026-03-10 21:09:42,883 [wrapper] ==== wrapper stdout END ====
[2026-03-10 14:09:43] 2026-03-10 21:09:42,937 [wrapper] ==== wrapper stderr END ====
[2026-03-10 14:09:43]  *** Error codes and diagnostics ***
[2026-03-10 14:09:43]     "exeErrorCode": 65,
[2026-03-10 14:09:43]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-10 14:09:43]     "pilotErrorCode": 1305,
[2026-03-10 14:09:43]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-10 14:09:43]  *** Listing of results directory ***
[2026-03-10 14:09:43] total 211644
[2026-03-10 14:09:43] -rw-r--r--. 1 boinc boinc    584627 Mar 10 09:46 pilot3.tar.gz
[2026-03-10 14:09:43] -rwx------. 1 boinc boinc     36322 Mar 10 09:50 runpilot2-wrapper.sh
[2026-03-10 14:09:43] -rw-r--r--. 1 boinc boinc      5111 Mar 10 09:50 queuedata.json
[2026-03-10 14:09:43] -rw-r--r--. 1 boinc boinc       100 Mar 10 14:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 14:09:43] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 14:03 run_atlas
[2026-03-10 14:09:43] -rw-r--r--. 1 boinc boinc       105 Mar 10 14:03 job.xml
[2026-03-10 14:09:43] -rw-r--r--. 1 boinc boinc      6589 Mar 10 14:03 init_data.xml
[2026-03-10 14:09:43] -rw-r--r--. 2 boinc boinc 212566413 Mar 10 14:03 EVNT.48967027._000134.pool.root.1
[2026-03-10 14:09:43] -rw-r--r--. 2 boinc boinc     15845 Mar 10 14:03 start_atlas.sh
[2026-03-10 14:09:43] drwxrwx--x. 2 boinc boinc      4096 Mar 10 14:03 shared
[2026-03-10 14:09:43] -rw-r--r--. 2 boinc boinc    597949 Mar 10 14:03 input.tar.gz
[2026-03-10 14:09:43] -rw-r--r--. 1 boinc boinc         0 Mar 10 14:03 boinc_lockfile
[2026-03-10 14:09:43] -rw-r--r--. 1 boinc boinc      2565 Mar 10 14:03 pandaJob.out
[2026-03-10 14:09:43] -rw-------. 1 boinc boinc   1006644 Mar 10 14:04 agis_schedconf.cvmfs.json
[2026-03-10 14:09:43] -rw-------. 1 boinc boinc   1511578 Mar 10 14:04 agis_ddmendpoints.agis.ALL.json
[2026-03-10 14:09:43] -rw-------. 1 boinc boinc       444 Mar 10 14:04 workernode_map.json
[2026-03-10 14:09:43] drwx------. 5 boinc boinc      4096 Mar 10 14:04 pilot3
[2026-03-10 14:09:43] -rw-r--r--. 1 boinc boinc       524 Mar 10 14:06 boinc_task_state.xml
[2026-03-10 14:09:43] -rw-------. 1 boinc boinc       966 Mar 10 14:06 memory_monitor_summary.json
[2026-03-10 14:09:43] -rw-------. 1 boinc boinc     22273 Mar 10 14:06 log.48967030._003358.job.log.tgz.1
[2026-03-10 14:09:43] -rw-------. 1 boinc boinc      7033 Mar 10 14:08 heartbeat.json
[2026-03-10 14:09:43] -rw-------. 1 boinc boinc        95 Mar 10 14:09 pilot_heartbeat.json
[2026-03-10 14:09:43] -rw-------. 1 boinc boinc      5005 Mar 10 14:09 pilotlog.txt
[2026-03-10 14:09:43] -rw-r--r--. 1 boinc boinc        23 Mar 10 14:09 wrapper_checkpoint.txt
[2026-03-10 14:09:43] -rw-r--r--. 1 boinc boinc      8192 Mar 10 14:09 boinc_mmap_file
[2026-03-10 14:09:43] -rw-------. 1 boinc boinc     90083 Mar 10 14:09 log.48967030._003358.job.log.1
[2026-03-10 14:09:43] -rw-------. 1 boinc boinc       188 Mar 10 14:09 output.list
[2026-03-10 14:09:43] -rw-r--r--. 1 boinc boinc       620 Mar 10 14:09 runtime_log
[2026-03-10 14:09:43] -rw-------. 1 boinc boinc    133120 Mar 10 14:09 result.tar.gz
[2026-03-10 14:09:43] -rw-r--r--. 1 boinc boinc      8635 Mar 10 14:09 runtime_log.err
[2026-03-10 14:09:43] -rw-------. 1 boinc boinc       642 Mar 10 14:09 D4wMDmZSFK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmwqdLDmfzb8Om.diag
[2026-03-10 14:09:43] -rw-r--r--. 1 boinc boinc     21305 Mar 10 14:09 stderr.txt
[2026-03-10 14:09:43] No HITS result produced
[2026-03-10 14:09:43]  *** Contents of shared directory: ***
[2026-03-10 14:09:43] total 208320
[2026-03-10 14:09:43] -rw-r--r--. 2 boinc boinc 212566413 Mar 10 14:03 ATLAS.root_0
[2026-03-10 14:09:43] -rw-r--r--. 2 boinc boinc     15845 Mar 10 14:03 start_atlas.sh
[2026-03-10 14:09:43] -rw-r--r--. 2 boinc boinc    597949 Mar 10 14:03 input.tar.gz
[2026-03-10 14:09:43] -rw-------. 1 boinc boinc    133120 Mar 10 14:09 result.tar.gz
14:09:45 (3781702): run_atlas exited; CPU time 25.794381
14:09:45 (3781702): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN