Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:03:34 (1613118): wrapper (7.7.26015): starting
12:03:34 (1613118): wrapper: running run_atlas (--nthreads 8)
[2026-03-10 12:03:35] Arguments: --nthreads 8
[2026-03-10 12:03:35] Threads: 8
[2026-03-10 12:03:35] Checking for CVMFS
[2026-03-10 12:03:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-10 12:03:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-10 12:03:35] Running cvmfs_config stat atlas.cern.ch
[2026-03-10 12:03:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-10 12:03:36] 2.13.3.0 7542 109493 262704 157119 1 761 38044558 40960000 24909 16776704 0 326440819 99.689 284812283 36386 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-10 12:03:36] CVMFS is ok
[2026-03-10 12:03:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 12:03:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 12:03:36] Further information can be found at the LHC@home message board.
[2026-03-10 12:03:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 12:03:36] Checking for apptainer binary...
[2026-03-10 12:03:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-10 12:03:36] Running /usr/bin/apptainer --version
[2026-03-10 12:03:36] apptainer version 1.4.5-2.el9
[2026-03-10 12:03:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 12:03:37] c-212-6.aglt2.org
[2026-03-10 12:03:37] apptainer works
[2026-03-10 12:03:37] Set ATHENA_PROC_NUMBER=8
[2026-03-10 12:03:37] Set ATHENA_CORE_NUMBER=8
[2026-03-10 12:03:37] Starting ATLAS job with PandaID=7035989571
[2026-03-10 12:03:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 14:22:03]  *** The last 200 lines of the pilot log: ***
[2026-03-10 14:22:03] 2026-03-10 18:21:16,026 | INFO     | job 7035989571 has finished - writing final server update
[2026-03-10 14:22:03] 2026-03-10 18:21:16,026 | INFO     | total number of processed events: 400 (read)
[2026-03-10 14:22:03] 2026-03-10 18:21:16,107 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-7035989571/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 14:22:03] 2026-03-10 18:21:16,108 | INFO     | extracted standard info from prmon json
[2026-03-10 14:22:03] 2026-03-10 18:21:16,108 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 14:22:03] 2026-03-10 18:21:16,108 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 14:22:03] 2026-03-10 18:21:16,109 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 14:22:03] 2026-03-10 18:21:16,109 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 14:22:03] 2026-03-10 18:21:16,111 | INFO     | fitting pss+swap vs Time
[2026-03-10 14:22:03] 2026-03-10 18:21:16,111 | INFO     | sum of square deviations: 746016877.5522376
[2026-03-10 14:22:03] 2026-03-10 18:21:16,111 | INFO     | sum of deviations: 2083332179.3880577
[2026-03-10 14:22:03] 2026-03-10 18:21:16,111 | INFO     | mean x: 1773162795.6716418
[2026-03-10 14:22:03] 2026-03-10 18:21:16,112 | INFO     | mean y: 2509961.417910448
[2026-03-10 14:22:03] 2026-03-10 18:21:16,112 | INFO     | intersect: -4949237408.744979
[2026-03-10 14:22:03] 2026-03-10 18:21:16,112 | INFO     | chi2: 2.9799818160362554
[2026-03-10 14:22:03] 2026-03-10 18:21:16,112 | INFO     | sum of square deviations: 665577000.2480606
[2026-03-10 14:22:03] 2026-03-10 18:21:16,113 | INFO     | sum of deviations: 10854471915.798447
[2026-03-10 14:22:03] 2026-03-10 18:21:16,113 | INFO     | mean x: 1773162643.1705427
[2026-03-10 14:22:03] 2026-03-10 18:21:16,113 | INFO     | mean y: 2526073.7364341086
[2026-03-10 14:22:03] 2026-03-10 18:21:16,113 | INFO     | intersect: -28914855544.41494
[2026-03-10 14:22:03] 2026-03-10 18:21:16,113 | INFO     | chi2: 2.2226493362478323
[2026-03-10 14:22:03] 2026-03-10 18:21:16,113 | INFO     | current chi2=2.2226493362478323 (change=25.413996679878032 %)
[2026-03-10 14:22:03] 2026-03-10 18:21:16,113 | INFO     | sum of square deviations: 591145105.0967727
[2026-03-10 14:22:03] 2026-03-10 18:21:16,114 | INFO     | sum of deviations: 10458849052.06452
[2026-03-10 14:22:03] 2026-03-10 18:21:16,114 | INFO     | mean x: 1773162490.6774194
[2026-03-10 14:22:03] 2026-03-10 18:21:16,114 | INFO     | mean y: 2525264.7016129033
[2026-03-10 14:22:03] 2026-03-10 18:21:16,114 | INFO     | intersect: -31369194935.437683
[2026-03-10 14:22:03] 2026-03-10 18:21:16,114 | INFO     | chi2: 2.226776371691187
[2026-03-10 14:22:03] 2026-03-10 18:21:16,114 | INFO     | current chi2=2.226776371691187 (change=-0.1856809068371318 %)
[2026-03-10 14:22:03] 2026-03-10 18:21:16,114 | INFO     | right removable region: 123
[2026-03-10 14:22:03] 2026-03-10 18:21:16,114 | INFO     | sum of square deviations: 665571144.8992261
[2026-03-10 14:22:03] 2026-03-10 18:21:16,115 | INFO     | sum of deviations: -23883326927.379845
[2026-03-10 14:22:03] 2026-03-10 18:21:16,115 | INFO     | mean x: 1773162948.1782947
[2026-03-10 14:22:03] 2026-03-10 18:21:16,115 | INFO     | mean y: 2558491.3643410853
[2026-03-10 14:22:03] 2026-03-10 18:21:16,115 | INFO     | intersect: 63630663031.97051
[2026-03-10 14:22:03] 2026-03-10 18:21:16,115 | INFO     | chi2: 0.9567571997409297
[2026-03-10 14:22:03] 2026-03-10 18:21:16,115 | INFO     | current chi2=0.9567571997409297 (change=67.89385778824868 %)
[2026-03-10 14:22:03] 2026-03-10 18:21:16,116 | INFO     | sum of square deviations: 591141139.4435494
[2026-03-10 14:22:03] 2026-03-10 18:21:16,116 | INFO     | sum of deviations: -20090658948.09677
[2026-03-10 14:22:03] 2026-03-10 18:21:16,116 | INFO     | mean x: 1773163100.669355
[2026-03-10 14:22:03] 2026-03-10 18:21:16,116 | INFO     | mean y: 2550640.290322581
[2026-03-10 14:22:03] 2026-03-10 18:21:16,116 | INFO     | intersect: 60265680268.57375
[2026-03-10 14:22:03] 2026-03-10 18:21:16,117 | INFO     | chi2: 0.943427734815188
[2026-03-10 14:22:03] 2026-03-10 18:21:16,117 | INFO     | current chi2=0.943427734815188 (change=1.3931920166737135 %)
[2026-03-10 14:22:03] 2026-03-10 18:21:16,117 | INFO     | left removable region: 20
[2026-03-10 14:22:03] 2026-03-10 18:21:16,117 | INFO     | sum of square deviations: 338786210.1941756
[2026-03-10 14:22:03] 2026-03-10 18:21:16,117 | INFO     | sum of deviations: 363516555.70873785
[2026-03-10 14:22:03] 2026-03-10 18:21:16,117 | INFO     | mean x: 1773163070.1650486
[2026-03-10 14:22:03] 2026-03-10 18:21:16,117 | INFO     | mean y: 2539860.2524271845
[2026-03-10 14:22:03] 2026-03-10 18:21:16,117 | INFO     | intersect: -1900058629.8304229
[2026-03-10 14:22:03] 2026-03-10 18:21:16,118 | INFO     | chi2: 0.0004627149963985282
[2026-03-10 14:22:03] 2026-03-10 18:21:16,118 | INFO     | current memory leak: 1.07 B/s (using 103 data points, chi2=0.00)
[2026-03-10 14:22:03] 2026-03-10 18:21:16,118 | INFO     | could have reported an average CPU frequency of 3276 MHz (8 samples)
[2026-03-10 14:22:03] 2026-03-10 18:21:16,118 | INFO     | ..............................
[2026-03-10 14:22:03] 2026-03-10 18:21:16,118 | INFO     | . Timing measurements:
[2026-03-10 14:22:03] 2026-03-10 18:21:16,118 | INFO     | . get job = 0 s
[2026-03-10 14:22:03] 2026-03-10 18:21:16,118 | INFO     | . initial setup = 21 s
[2026-03-10 14:22:03] 2026-03-10 18:21:16,118 | INFO     | . payload setup = 30 s
[2026-03-10 14:22:03] 2026-03-10 18:21:16,118 | INFO     | . stage-in = 0 s
[2026-03-10 14:22:03] 2026-03-10 18:21:16,118 | INFO     | . payload execution = 8150 s
[2026-03-10 14:22:03] 2026-03-10 18:21:16,119 | INFO     | . stage-out = 2 s
[2026-03-10 14:22:03] 2026-03-10 18:21:16,119 | INFO     | . log creation = 0 s
[2026-03-10 14:22:03] 2026-03-10 18:21:16,119 | INFO     | ..............................
[2026-03-10 14:22:03] 2026-03-10 18:21:16,250 | INFO     | 
[2026-03-10 14:22:03] 2026-03-10 18:21:16,250 | INFO     | job summary report
[2026-03-10 14:22:03] 2026-03-10 18:21:16,250 | INFO     | --------------------------------------------------
[2026-03-10 14:22:03] 2026-03-10 18:21:16,250 | INFO     | PanDA job id: 7035989571
[2026-03-10 14:22:03] 2026-03-10 18:21:16,250 | INFO     | task id: 48847917
[2026-03-10 14:22:03] 2026-03-10 18:21:16,250 | INFO     | errors: (none)
[2026-03-10 14:22:03] 2026-03-10 18:21:16,250 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 14:22:03] 2026-03-10 18:21:16,251 | INFO     | pilot state: finished 
[2026-03-10 14:22:03] 2026-03-10 18:21:16,251 | INFO     | transexitcode: 0
[2026-03-10 14:22:03] 2026-03-10 18:21:16,251 | INFO     | exeerrorcode: 0
[2026-03-10 14:22:03] 2026-03-10 18:21:16,251 | INFO     | exeerrordiag: 
[2026-03-10 14:22:03] 2026-03-10 18:21:16,251 | INFO     | exitcode: 0
[2026-03-10 14:22:03] 2026-03-10 18:21:16,251 | INFO     | exitmsg: OK
[2026-03-10 14:22:03] 2026-03-10 18:21:16,251 | INFO     | cpuconsumptiontime: 30569 s
[2026-03-10 14:22:03] 2026-03-10 18:21:16,251 | INFO     | nevents: 400
[2026-03-10 14:22:03] 2026-03-10 18:21:16,251 | INFO     | neventsw: 0
[2026-03-10 14:22:03] 2026-03-10 18:21:16,251 | INFO     | pid: 1629742
[2026-03-10 14:22:03] 2026-03-10 18:21:16,251 | INFO     | pgrp: 1629742
[2026-03-10 14:22:03] 2026-03-10 18:21:16,251 | INFO     | corecount: 8
[2026-03-10 14:22:03] 2026-03-10 18:21:16,251 | INFO     | event service: False
[2026-03-10 14:22:03] 2026-03-10 18:21:16,251 | INFO     | sizes: {0: 2279921, 1: 2279949, 2: 2280410, 8186: 2308044, 8190: 2317042, 8191: 2317098, 8192: 2317420}
[2026-03-10 14:22:03] 2026-03-10 18:21:16,251 | INFO     | --------------------------------------------------
[2026-03-10 14:22:03] 2026-03-10 18:21:16,252 | INFO     | 
[2026-03-10 14:22:03] 2026-03-10 18:21:16,252 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-03-10 14:22:03] 2026-03-10 18:21:16,382 | INFO     | PID=1623410 has CPU usage=10.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-10 14:22:03] 2026-03-10 18:21:16,382 | INFO     | .. there are 31 such processes running
[2026-03-10 14:22:03] 2026-03-10 18:21:16,399 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 14:22:03] 2026-03-10 18:21:16,399 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 14:22:03] 2026-03-10 18:21:16,399 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 14:22:03] 2026-03-10 18:21:16,399 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 14:22:03] 2026-03-10 18:21:16,399 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 14:22:03] 2026-03-10 18:21:16,400 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 14:22:03] 2026-03-10 18:21:16,400 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 14:22:03] 2026-03-10 18:21:16,400 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 14:22:03] 2026-03-10 18:21:16,400 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 14:22:03] 2026-03-10 18:21:16,400 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 14:22:03] 2026-03-10 18:21:16,400 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 14:22:03] 2026-03-10 18:21:16,400 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 14:22:03] 2026-03-10 18:21:16,400 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 14:22:03] 2026-03-10 18:21:16,400 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 14:22:03] 2026-03-10 18:21:16,400 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 14:22:03] 2026-03-10 18:21:16,400 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 14:22:03] 2026-03-10 18:21:16,400 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 14:22:03] 2026-03-10 18:21:16,400 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 14:22:03] 2026-03-10 18:21:16,400 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 14:22:03] 2026-03-10 18:21:16,401 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 14:22:03] 2026-03-10 18:21:16,401 | INFO     | job 7035989571 has completed (purged errors)
[2026-03-10 14:22:03] 2026-03-10 18:21:16,401 | INFO     | overall cleanup function is called
[2026-03-10 14:22:03] 2026-03-10 18:21:17,411 | INFO     | --- collectZombieJob: --- 10, [1629742]
[2026-03-10 14:22:03] 2026-03-10 18:21:17,411 | INFO     | zombie collector waiting for pid 1629742
[2026-03-10 14:22:03] 2026-03-10 18:21:17,411 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 14:22:03] 2026-03-10 18:21:17,411 | INFO     | collected zombie processes
[2026-03-10 14:22:03] 2026-03-10 18:21:17,411 | INFO     | will attempt to kill all subprocesses of pid=1629742
[2026-03-10 14:22:03] 2026-03-10 18:21:18,459 | INFO     | process IDs to be killed: [1629742] (in reverse order)
[2026-03-10 14:22:03] 2026-03-10 18:21:18,661 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 14:22:03] 2026-03-10 18:21:18,661 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 14:22:03] 2026-03-10 18:21:18,694 | INFO     | did not find any defunct processes belonging to 1629742
[2026-03-10 14:22:03] 2026-03-10 18:21:18,763 | INFO     | did not find any defunct processes belonging to 1629742
[2026-03-10 14:22:03] 2026-03-10 18:21:18,764 | INFO     | ready for new job
[2026-03-10 14:22:03] 2026-03-10 18:21:18,764 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 14:22:03] 2026-03-10 18:21:18,766 | INFO     | **************************************
[2026-03-10 14:22:03] 2026-03-10 18:21:18,766 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 14:22:03] 2026-03-10 18:21:18,787 | INFO     | **************************************
[2026-03-10 14:22:03] 2026-03-10 18:21:18,787 | INFO     | 
[2026-03-10 14:22:03] 2026-03-10 18:21:18,796 | INFO     | architecture information:
[2026-03-10 14:22:03] 2026-03-10 18:21:18,796 | INFO     | executing command: cat /etc/os-release
[2026-03-10 14:22:03] 2026-03-10 18:21:18,903 | INFO     | cat /etc/os-release:
[2026-03-10 14:22:03] NAME="CentOS Linux"
[2026-03-10 14:22:03] VERSION="7 (Core)"
[2026-03-10 14:22:03] ID="centos"
[2026-03-10 14:22:03] ID_LIKE="rhel fedora"
[2026-03-10 14:22:03] VERSION_ID="7"
[2026-03-10 14:22:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 14:22:03] ANSI_COLOR="0;31"
[2026-03-10 14:22:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 14:22:03] HOME_URL="https://www.centos.org/"
[2026-03-10 14:22:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 14:22:03] 
[2026-03-10 14:22:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 14:22:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 14:22:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 14:22:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 14:22:03] 
[2026-03-10 14:22:03] 2026-03-10 18:21:18,904 | INFO     | **************************************
[2026-03-10 14:22:03] 2026-03-10 18:21:19,411 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-03-10 14:22:03] 2026-03-10 18:21:19,560 | INFO     | sufficient remaining disk space (126139498496 B)
[2026-03-10 14:22:03] 2026-03-10 18:21:19,560 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 14:22:03] 2026-03-10 18:21:19,560 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 14:22:03] 2026-03-10 18:21:19,560 | INFO     | update_server=False
[2026-03-10 14:22:03] 2026-03-10 18:21:19,560 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 14:22:03] 2026-03-10 18:21:19,561 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 14:22:03] 2026-03-10 18:21:19,561 | INFO     | aborting loop
[2026-03-10 14:22:03] 2026-03-10 18:21:19,565 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 14:22:03] 2026-03-10 18:21:20,455 | INFO     | all data control threads have been joined
[2026-03-10 14:22:03] 2026-03-10 18:21:20,567 | INFO     | [job] job monitor thread has finished
[2026-03-10 14:22:03] 2026-03-10 18:21:20,576 | INFO     | [job] retrieve thread has finished
[2026-03-10 14:22:03] 2026-03-10 18:21:20,621 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 14:22:03] 2026-03-10 18:21:20,671 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 14:22:03] 2026-03-10 18:21:20,688 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 14:22:03] 2026-03-10 18:21:20,722 | INFO     | all payload control threads have been joined
[2026-03-10 14:22:03] 2026-03-10 18:21:20,824 | INFO     | all job control threads have been joined
[2026-03-10 14:22:03] 2026-03-10 18:21:20,992 | INFO     | [payload] failed_post thread has finished
[2026-03-10 14:22:03] 2026-03-10 18:21:21,038 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 14:22:03] 2026-03-10 18:21:21,178 | INFO     | [data] copytool_in thread has finished
[2026-03-10 14:22:03] 2026-03-10 18:21:21,253 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 14:22:03] 2026-03-10 18:21:21,323 | INFO     | [job] validate thread has finished
[2026-03-10 14:22:03] 2026-03-10 18:21:21,463 | INFO     | [data] control thread has finished
[2026-03-10 14:22:03] 2026-03-10 18:21:21,529 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 14:22:03] 2026-03-10 18:21:21,572 | INFO     | [data] copytool_out thread has finished
[2026-03-10 14:22:03] 2026-03-10 18:21:21,728 | INFO     | [payload] control thread has finished
[2026-03-10 14:22:03] 2026-03-10 18:21:21,830 | INFO     | [job] control thread has finished
[2026-03-10 14:22:03] 2026-03-10 18:21:22,153 | INFO     | [payload] validate_post thread has finished
[2026-03-10 14:22:03] 2026-03-10 18:21:22,259 | INFO     | [job] queue monitor thread has finished
[2026-03-10 14:22:03] 2026-03-10 18:21:24,630 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 14:22:03] 2026-03-10 18:21:49,986 | INFO     | PID=1623410 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 14:22:03] 2026-03-10 18:21:49,989 | INFO     | .. there are 31 such processes running
[2026-03-10 14:22:03] 2026-03-10 18:21:49,992 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 14:22:03] 2026-03-10 18:21:49,993 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 14:22:03] 2026-03-10 18:21:49,994 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 14:22:03] 2026-03-10 18:21:55,376 | INFO     | [monitor] cgroup control has ended
[2026-03-10 14:22:03] 2026-03-10 18:21:57,464 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140133225060160)>', '<ExcThread(monitor, started 140132854241024)>']
[2026-03-10 14:22:03] 2026-03-10 18:21:58,045 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 14:22:03] 2026-03-10 18:21:58,045 | INFO     | [monitor] control thread has ended
[2026-03-10 14:22:03] 2026-03-10 18:22:02,490 | INFO     | all workflow threads have been joined
[2026-03-10 14:22:03] 2026-03-10 18:22:02,490 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 14:22:03] 2026-03-10 18:22:02,491 | INFO     | traces error code: 0
[2026-03-10 14:22:03] 2026-03-10 18:22:02,491 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 14:22:03] 2026-03-10 18:22:02,750 [wrapper] ==== pilot stdout END ====
[2026-03-10 14:22:03] 2026-03-10 18:22:02,771 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 14:22:03] 2026-03-10 18:22:02,793 [wrapper] pilotpid: 1623410
[2026-03-10 14:22:03] 2026-03-10 18:22:02,826 [wrapper] Pilot exit status: 0
[2026-03-10 14:22:03] 2026-03-10 18:22:02,904 [wrapper] pandaids: 7035989571
[2026-03-10 14:22:03] 2026-03-10 18:22:03,159 [wrapper] cleanup supervisor_pilot 2085285 1623411
[2026-03-10 14:22:03] 2026-03-10 18:22:03,174 [wrapper] Test setup, not cleaning
[2026-03-10 14:22:03] 2026-03-10 18:22:03,196 [wrapper] apfmon messages muted
[2026-03-10 14:22:03] 2026-03-10 18:22:03,217 [wrapper] ==== wrapper stdout END ====
[2026-03-10 14:22:03] 2026-03-10 18:22:03,248 [wrapper] ==== wrapper stderr END ====
[2026-03-10 14:22:03]  *** Error codes and diagnostics ***
[2026-03-10 14:22:03]     "exeErrorCode": 0,
[2026-03-10 14:22:03]     "exeErrorDiag": "",
[2026-03-10 14:22:03]     "pilotErrorCode": 0,
[2026-03-10 14:22:03]     "pilotErrorDiag": "",
[2026-03-10 14:22:03]  *** Listing of results directory ***
[2026-03-10 14:22:04] total 463616
[2026-03-10 14:22:04] -rw-r--r--. 1 boincer umatlas    584627 Mar  2 07:41 pilot3.tar.gz
[2026-03-10 14:22:04] -rwx------. 1 boincer umatlas     36322 Mar  2 07:43 runpilot2-wrapper.sh
[2026-03-10 14:22:04] -rw-r--r--. 1 boincer umatlas      5111 Mar  2 07:44 queuedata.json
[2026-03-10 14:22:04] -rw-r--r--. 1 boincer umatlas       100 Mar 10 12:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 14:22:04] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 10 12:03 run_atlas
[2026-03-10 14:22:04] -rw-r--r--. 1 boincer umatlas       105 Mar 10 12:03 job.xml
[2026-03-10 14:22:04] -rw-r--r--. 2 boincer umatlas 275790016 Mar 10 12:03 EVNT.48454778._000001.pool.root.1
[2026-03-10 14:22:04] -rw-r--r--. 2 boincer umatlas     15845 Mar 10 12:03 start_atlas.sh
[2026-03-10 14:22:04] drwxrwx--x. 2 boincer umatlas      4096 Mar 10 12:03 shared
[2026-03-10 14:22:04] -rw-r--r--. 2 boincer umatlas    597984 Mar 10 12:03 input.tar.gz
[2026-03-10 14:22:04] -rw-r--r--. 1 boincer umatlas         0 Mar 10 12:03 boinc_lockfile
[2026-03-10 14:22:04] -rw-r--r--. 1 boincer umatlas      2670 Mar 10 12:03 pandaJob.out
[2026-03-10 14:22:04] -rw-------. 1 boincer umatlas        57 Mar 10 12:03 setup.sh.local
[2026-03-10 14:22:04] -rw-------. 1 boincer umatlas   1004455 Mar 10 12:04 agis_schedconf.cvmfs.json
[2026-03-10 14:22:04] -rw-------. 1 boincer umatlas   1511578 Mar 10 12:04 agis_ddmendpoints.agis.ALL.json
[2026-03-10 14:22:04] -rw-------. 1 boincer umatlas       428 Mar 10 12:04 workernode_map.json
[2026-03-10 14:22:04] drwx------. 5 boincer umatlas      4096 Mar 10 12:04 pilot3
[2026-03-10 14:22:04] -rw-------. 1 boincer umatlas 192160714 Mar 10 14:20 HITS.48847917._000013.pool.root.1
[2026-03-10 14:22:04] -rw-r--r--. 1 boincer umatlas       529 Mar 10 14:20 boinc_task_state.xml
[2026-03-10 14:22:04] -rw-------. 1 boincer umatlas        95 Mar 10 14:20 pilot_heartbeat.json
[2026-03-10 14:22:04] -rw-r--r--. 1 boincer umatlas      6957 Mar 10 14:21 init_data.xml
[2026-03-10 14:22:04] -rw-------. 1 boincer umatlas      1048 Mar 10 14:21 memory_monitor_summary.json
[2026-03-10 14:22:04] -rw-------. 1 boincer umatlas    371454 Mar 10 14:21 log.48847917._000013.job.log.tgz.1
[2026-03-10 14:22:04] -rw-------. 1 boincer umatlas      6325 Mar 10 14:21 heartbeat.json
[2026-03-10 14:22:04] -rw-r--r--. 1 boincer umatlas      8192 Mar 10 14:22 boinc_mmap_file
[2026-03-10 14:22:04] -rw-------. 1 boincer umatlas      4821 Mar 10 14:22 pilotlog.txt
[2026-03-10 14:22:04] -rw-r--r--. 1 boincer umatlas        27 Mar 10 14:22 wrapper_checkpoint.txt
[2026-03-10 14:22:04] -rw-------. 1 boincer umatlas   1051237 Mar 10 14:22 log.48847917._000013.job.log.1
[2026-03-10 14:22:04] -rw-------. 1 boincer umatlas       357 Mar 10 14:22 output.list
[2026-03-10 14:22:04] -rw-r--r--. 1 boincer umatlas       620 Mar 10 14:22 runtime_log
[2026-03-10 14:22:04] -rw-------. 1 boincer umatlas   1443840 Mar 10 14:22 result.tar.gz
[2026-03-10 14:22:04] -rw-r--r--. 1 boincer umatlas      9336 Mar 10 14:22 runtime_log.err
[2026-03-10 14:22:04] -rw-------. 1 boincer umatlas       652 Mar 10 14:22 EtRLDmNnHH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmnQDLDm5ELmMn.diag
[2026-03-10 14:22:04] -rw-r--r--. 1 boincer umatlas     21234 Mar 10 14:22 stderr.txt
[2026-03-10 14:22:04] HITS file was successfully produced:
[2026-03-10 14:22:04] -rw-------. 1 boincer umatlas 192160714 Mar 10 14:20 shared/HITS.pool.root.1
[2026-03-10 14:22:04]  *** Contents of shared directory: ***
[2026-03-10 14:22:04] total 459008
[2026-03-10 14:22:04] -rw-r--r--. 2 boincer umatlas 275790016 Mar 10 12:03 ATLAS.root_0
[2026-03-10 14:22:04] -rw-r--r--. 2 boincer umatlas     15845 Mar 10 12:03 start_atlas.sh
[2026-03-10 14:22:04] -rw-r--r--. 2 boincer umatlas    597984 Mar 10 12:03 input.tar.gz
[2026-03-10 14:22:04] -rw-------. 1 boincer umatlas 192160714 Mar 10 14:20 HITS.pool.root.1
[2026-03-10 14:22:04] -rw-------. 1 boincer umatlas   1443840 Mar 10 14:22 result.tar.gz
14:22:05 (1613118): run_atlas exited; CPU time 30869.168305
14:22:05 (1613118): called boinc_finish(0)

</stderr_txt>
]]>

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