Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:35:28 (1144141): wrapper (7.7.26015): starting
01:35:28 (1144141): wrapper: running run_atlas (--nthreads 4)
[2026-03-14 01:35:28] Arguments: --nthreads 4
[2026-03-14 01:35:28] Threads: 4
[2026-03-14 01:35:28] Checking for CVMFS
[2026-03-14 01:35:28] No cvmfs_config command found, will try listing directly
[2026-03-14 01:35:28] CVMFS is ok
[2026-03-14 01:35:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 01:35:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 01:35:28] Further information can be found at the LHC@home message board.
[2026-03-14 01:35:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 01:35:28] Checking for apptainer binary...
[2026-03-14 01:35:28] which: no apptainer in ((null))
[2026-03-14 01:35:28] apptainer is not installed, using version from CVMFS
[2026-03-14 01:35:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 01:35:28] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot12/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment ugluk10.grid.cesnet.cz
[2026-03-14 01:35:28] apptainer works
[2026-03-14 01:35:28] Set ATHENA_PROC_NUMBER=4
[2026-03-14 01:35:28] Set ATHENA_CORE_NUMBER=4
[2026-03-14 01:35:28] Starting ATLAS job with PandaID=7042431053
[2026-03-14 01:35:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot12/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 05:13:18]  *** The last 200 lines of the pilot log: ***
[2026-03-14 05:13:18] 2026-03-14 04:11:19,650 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-14 05:13:18] 2026-03-14 04:11:20,429 | INFO     | job 7042431053 has state=finished
[2026-03-14 05:13:18] 2026-03-14 04:11:20,429 | INFO     | preparing for final server update for job 7042431053 in state='finished'
[2026-03-14 05:13:18] 2026-03-14 04:11:20,429 | INFO     | reading metadata from: /var/lib/boinc/var/slot12/slots/0/PanDA_Pilot-7042431053/jobReport.json
[2026-03-14 05:13:18] 2026-03-14 04:11:20,432 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot12/slots/0/workernode_map.json
[2026-03-14 05:13:18] 2026-03-14 04:11:20,432 | INFO     | this job has now completed (state=finished)
[2026-03-14 05:13:18] 2026-03-14 04:11:20,432 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 05:13:18] 2026-03-14 04:11:20,432 | INFO     | log transfer has been attempted: DONE
[2026-03-14 05:13:18] 2026-03-14 04:11:20,433 | INFO     | job 7042431053 has finished - writing final server update
[2026-03-14 05:13:18] 2026-03-14 04:11:20,433 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2933383/.job.ad'
[2026-03-14 05:13:18] 2026-03-14 04:11:20,433 | INFO     | total number of processed events: 400 (read)
[2026-03-14 05:13:18] 2026-03-14 04:11:20,439 | INFO     | using path: /var/lib/boinc/var/slot12/slots/0/PanDA_Pilot-7042431053/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 05:13:18] 2026-03-14 04:11:20,440 | INFO     | extracted standard info from prmon json
[2026-03-14 05:13:18] 2026-03-14 04:11:20,440 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 05:13:18] 2026-03-14 04:11:20,440 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 05:13:18] 2026-03-14 04:11:20,441 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 05:13:18] 2026-03-14 04:11:20,441 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 05:13:18] 2026-03-14 04:11:20,445 | INFO     | fitting pss+swap vs Time
[2026-03-14 05:13:18] 2026-03-14 04:11:20,446 | INFO     | sum of square deviations: 2954447953.0
[2026-03-14 05:13:18] 2026-03-14 04:11:20,447 | INFO     | sum of deviations: 14838208855.499998
[2026-03-14 05:13:18] 2026-03-14 04:11:20,447 | INFO     | mean x: 1773454997.5
[2026-03-14 05:13:18] 2026-03-14 04:11:20,448 | INFO     | mean y: 2334210.966981132
[2026-03-14 05:13:18] 2026-03-14 04:11:20,448 | INFO     | intersect: -8904539786.259676
[2026-03-14 05:13:18] 2026-03-14 04:11:20,448 | INFO     | chi2: 1.3203766238141974
[2026-03-14 05:13:18] 2026-03-14 04:11:20,449 | INFO     | sum of square deviations: 2750295288.0
[2026-03-14 05:13:18] 2026-03-14 04:11:20,450 | INFO     | sum of deviations: 14504584453.000004
[2026-03-14 05:13:18] 2026-03-14 04:11:20,450 | INFO     | mean x: 1773454845.0
[2026-03-14 05:13:18] 2026-03-14 04:11:20,450 | INFO     | mean y: 2333961.7584541063
[2026-03-14 05:13:18] 2026-03-14 04:11:20,450 | INFO     | intersect: -9350561956.406874
[2026-03-14 05:13:18] 2026-03-14 04:11:20,451 | INFO     | chi2: 1.321084806145963
[2026-03-14 05:13:18] 2026-03-14 04:11:20,451 | INFO     | current chi2=1.321084806145963 (change=-0.05363487348934402 %)
[2026-03-14 05:13:18] 2026-03-14 04:11:20,451 | INFO     | right removable region: 206
[2026-03-14 05:13:18] 2026-03-14 04:11:20,451 | INFO     | sum of square deviations: 2750295288.0
[2026-03-14 05:13:18] 2026-03-14 04:11:20,453 | INFO     | sum of deviations: -10941018620.999996
[2026-03-14 05:13:18] 2026-03-14 04:11:20,453 | INFO     | mean x: 1773455150.0
[2026-03-14 05:13:18] 2026-03-14 04:11:20,453 | INFO     | mean y: 2353214.806763285
[2026-03-14 05:13:18] 2026-03-14 04:11:20,453 | INFO     | intersect: 7057379598.453152
[2026-03-14 05:13:18] 2026-03-14 04:11:20,454 | INFO     | chi2: 0.026794557799097254
[2026-03-14 05:13:18] 2026-03-14 04:11:20,454 | INFO     | current chi2=0.026794557799097254 (change=97.97068826304306 %)
[2026-03-14 05:13:18] 2026-03-14 04:11:20,454 | INFO     | sum of square deviations: 2555770710.5
[2026-03-14 05:13:18] 2026-03-14 04:11:20,456 | INFO     | sum of deviations: -9439712607.0
[2026-03-14 05:13:18] 2026-03-14 04:11:20,456 | INFO     | mean x: 1773455302.5
[2026-03-14 05:13:18] 2026-03-14 04:11:20,456 | INFO     | mean y: 2352027.623762376
[2026-03-14 05:13:18] 2026-03-14 04:11:20,456 | INFO     | intersect: 6552590790.507592
[2026-03-14 05:13:18] 2026-03-14 04:11:20,457 | INFO     | chi2: 0.023805861396746897
[2026-03-14 05:13:18] 2026-03-14 04:11:20,457 | INFO     | current chi2=0.023805861396746897 (change=11.154117282917243 %)
[2026-03-14 05:13:18] 2026-03-14 04:11:20,457 | INFO     | left removable region: 20
[2026-03-14 05:13:18] 2026-03-14 04:11:20,457 | INFO     | sum of square deviations: 1995283922.5
[2026-03-14 05:13:18] 2026-03-14 04:11:20,458 | INFO     | sum of deviations: -5421705284.5
[2026-03-14 05:13:18] 2026-03-14 04:11:20,459 | INFO     | mean x: 1773455424.5
[2026-03-14 05:13:18] 2026-03-14 04:11:20,459 | INFO     | mean y: 2348874.930107527
[2026-03-14 05:13:18] 2026-03-14 04:11:20,459 | INFO     | intersect: 4821288444.587688
[2026-03-14 05:13:18] 2026-03-14 04:11:20,459 | INFO     | chi2: 0.01980731456953378
[2026-03-14 05:13:18] 2026-03-14 04:11:20,459 | INFO     | current memory leak: -2.72 B/s (using 186 data points, chi2=0.02)
[2026-03-14 05:13:18] 2026-03-14 04:11:20,460 | INFO     | could have reported an average CPU frequency of 2612 MHz (11 samples)
[2026-03-14 05:13:18] 2026-03-14 04:11:20,460 | INFO     | ..............................
[2026-03-14 05:13:18] 2026-03-14 04:11:20,460 | INFO     | . Timing measurements:
[2026-03-14 05:13:18] 2026-03-14 04:11:20,460 | INFO     | . get job = 0 s
[2026-03-14 05:13:18] 2026-03-14 04:11:20,460 | INFO     | . initial setup = 5 s
[2026-03-14 05:13:18] 2026-03-14 04:11:20,461 | INFO     | . payload setup = 4 s
[2026-03-14 05:13:18] 2026-03-14 04:11:20,461 | INFO     | . stage-in = 0 s
[2026-03-14 05:13:18] 2026-03-14 04:11:20,461 | INFO     | . payload execution = 12914 s
[2026-03-14 05:13:18] 2026-03-14 04:11:20,461 | INFO     | . stage-out = 1 s
[2026-03-14 05:13:18] 2026-03-14 04:11:20,461 | INFO     | . log creation = 0 s
[2026-03-14 05:13:18] 2026-03-14 04:11:20,461 | INFO     | ..............................
[2026-03-14 05:13:18] 2026-03-14 04:11:21,044 | INFO     | 
[2026-03-14 05:13:18] 2026-03-14 04:11:21,044 | INFO     | job summary report
[2026-03-14 05:13:18] 2026-03-14 04:11:21,044 | INFO     | --------------------------------------------------
[2026-03-14 05:13:18] 2026-03-14 04:11:21,045 | INFO     | PanDA job id: 7042431053
[2026-03-14 05:13:18] 2026-03-14 04:11:21,045 | INFO     | task id: 48955006
[2026-03-14 05:13:18] 2026-03-14 04:11:21,045 | INFO     | errors: (none)
[2026-03-14 05:13:18] 2026-03-14 04:11:21,045 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 05:13:18] 2026-03-14 04:11:21,045 | INFO     | pilot state: finished 
[2026-03-14 05:13:18] 2026-03-14 04:11:21,045 | INFO     | transexitcode: 0
[2026-03-14 05:13:18] 2026-03-14 04:11:21,045 | INFO     | exeerrorcode: 0
[2026-03-14 05:13:18] 2026-03-14 04:11:21,045 | INFO     | exeerrordiag: 
[2026-03-14 05:13:18] 2026-03-14 04:11:21,045 | INFO     | exitcode: 0
[2026-03-14 05:13:18] 2026-03-14 04:11:21,046 | INFO     | exitmsg: OK
[2026-03-14 05:13:18] 2026-03-14 04:11:21,046 | INFO     | cpuconsumptiontime: 48605 s
[2026-03-14 05:13:18] 2026-03-14 04:11:21,046 | INFO     | nevents: 400
[2026-03-14 05:13:18] 2026-03-14 04:11:21,046 | INFO     | neventsw: 0
[2026-03-14 05:13:18] 2026-03-14 04:11:21,046 | INFO     | pid: 1152342
[2026-03-14 05:13:18] 2026-03-14 04:11:21,046 | INFO     | pgrp: 1152342
[2026-03-14 05:13:18] 2026-03-14 04:11:21,046 | INFO     | corecount: 4
[2026-03-14 05:13:18] 2026-03-14 04:11:21,046 | INFO     | event service: False
[2026-03-14 05:13:18] 2026-03-14 04:11:21,047 | INFO     | sizes: {0: 2279754, 1: 2280215, 11: 2280215, 12923: 2310281, 12924: 2319301, 12926: 2319357, 12928: 2319679}
[2026-03-14 05:13:18] 2026-03-14 04:11:21,047 | INFO     | --------------------------------------------------
[2026-03-14 05:13:18] 2026-03-14 04:11:21,047 | INFO     | 
[2026-03-14 05:13:18] 2026-03-14 04:11:21,047 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot12/slots/0
[2026-03-14 05:13:18] 2026-03-14 04:11:21,066 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 05:13:18] 2026-03-14 04:11:21,066 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 05:13:18] 2026-03-14 04:11:21,066 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 05:13:18] 2026-03-14 04:11:21,067 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 05:13:18] 2026-03-14 04:11:21,067 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 05:13:18] 2026-03-14 04:11:21,067 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 05:13:18] 2026-03-14 04:11:21,067 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 05:13:18] 2026-03-14 04:11:21,067 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 05:13:18] 2026-03-14 04:11:21,067 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 05:13:18] 2026-03-14 04:11:21,067 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 05:13:18] 2026-03-14 04:11:21,067 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 05:13:18] 2026-03-14 04:11:21,068 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 05:13:18] 2026-03-14 04:11:21,068 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 05:13:18] 2026-03-14 04:11:21,068 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 05:13:18] 2026-03-14 04:11:21,068 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 05:13:18] 2026-03-14 04:11:21,068 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 05:13:18] 2026-03-14 04:11:21,068 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 05:13:18] 2026-03-14 04:11:21,068 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 05:13:18] 2026-03-14 04:11:21,068 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 05:13:18] 2026-03-14 04:11:21,069 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 05:13:18] 2026-03-14 04:11:21,069 | INFO     | job 7042431053 has completed (purged errors)
[2026-03-14 05:13:18] 2026-03-14 04:11:21,069 | INFO     | overall cleanup function is called
[2026-03-14 05:13:18] 2026-03-14 04:11:22,076 | INFO     | --- collectZombieJob: --- 10, [1152342]
[2026-03-14 05:13:18] 2026-03-14 04:11:22,076 | INFO     | zombie collector waiting for pid 1152342
[2026-03-14 05:13:18] 2026-03-14 04:11:22,077 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 05:13:18] 2026-03-14 04:11:22,077 | INFO     | collected zombie processes
[2026-03-14 05:13:18] 2026-03-14 04:11:22,077 | INFO     | will attempt to kill all subprocesses of pid=1152342
[2026-03-14 05:13:18] 2026-03-14 04:11:22,333 | INFO     | process IDs to be killed: [1152342] (in reverse order)
[2026-03-14 05:13:18] 2026-03-14 04:11:22,413 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 05:13:18] 2026-03-14 04:11:22,413 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 05:13:18] 2026-03-14 04:11:22,421 | INFO     | did not find any defunct processes belonging to 1152342
[2026-03-14 05:13:18] 2026-03-14 04:11:22,427 | INFO     | did not find any defunct processes belonging to 1152342
[2026-03-14 05:13:18] 2026-03-14 04:11:22,427 | INFO     | ready for new job
[2026-03-14 05:13:18] 2026-03-14 04:11:22,427 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 05:13:18] 2026-03-14 04:11:22,429 | INFO     | **************************************
[2026-03-14 05:13:18] 2026-03-14 04:11:22,430 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-14 05:13:18] 2026-03-14 04:11:22,430 | INFO     | **************************************
[2026-03-14 05:13:18] 2026-03-14 04:11:22,430 | INFO     | 
[2026-03-14 05:13:18] 2026-03-14 04:11:22,432 | INFO     | architecture information:
[2026-03-14 05:13:18] 2026-03-14 04:11:22,433 | INFO     | executing command: cat /etc/os-release
[2026-03-14 05:13:18] 2026-03-14 04:11:22,446 | INFO     | cat /etc/os-release:
[2026-03-14 05:13:18] NAME="CentOS Linux"
[2026-03-14 05:13:18] VERSION="7 (Core)"
[2026-03-14 05:13:18] ID="centos"
[2026-03-14 05:13:18] ID_LIKE="rhel fedora"
[2026-03-14 05:13:18] VERSION_ID="7"
[2026-03-14 05:13:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 05:13:18] ANSI_COLOR="0;31"
[2026-03-14 05:13:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 05:13:18] HOME_URL="https://www.centos.org/"
[2026-03-14 05:13:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 05:13:18] 
[2026-03-14 05:13:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 05:13:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 05:13:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 05:13:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 05:13:18] 
[2026-03-14 05:13:18] 2026-03-14 04:11:22,447 | INFO     | **************************************
[2026-03-14 05:13:18] 2026-03-14 04:11:22,949 | INFO     | executing command: df -mP /var/lib/boinc/var/slot12/slots/0
[2026-03-14 05:13:18] 2026-03-14 04:11:22,965 | INFO     | sufficient remaining disk space (100929634304 B)
[2026-03-14 05:13:18] 2026-03-14 04:11:22,965 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 05:13:18] 2026-03-14 04:11:22,966 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 05:13:18] 2026-03-14 04:11:22,966 | INFO     | update_server=False
[2026-03-14 05:13:18] 2026-03-14 04:11:22,966 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 05:13:18] 2026-03-14 04:11:22,966 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 05:13:18] 2026-03-14 04:11:23,158 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 05:13:18] 2026-03-14 04:11:23,158 | INFO     | aborting loop
[2026-03-14 05:13:18] 2026-03-14 04:11:23,395 | INFO     | all payload control threads have been joined
[2026-03-14 05:13:18] 2026-03-14 04:11:23,764 | INFO     | all data control threads have been joined
[2026-03-14 05:13:18] 2026-03-14 04:11:23,959 | INFO     | all job control threads have been joined
[2026-03-14 05:13:18] 2026-03-14 04:11:23,969 | INFO     | [job] retrieve thread has finished
[2026-03-14 05:13:18] 2026-03-14 04:11:23,996 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 05:13:18] 2026-03-14 04:11:24,082 | INFO     | [payload] failed_post thread has finished
[2026-03-14 05:13:18] 2026-03-14 04:11:24,164 | INFO     | [job] job monitor thread has finished
[2026-03-14 05:13:18] 2026-03-14 04:11:24,401 | INFO     | [payload] control thread has finished
[2026-03-14 05:13:18] 2026-03-14 04:11:24,603 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 05:13:18] 2026-03-14 04:11:24,607 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 05:13:18] 2026-03-14 04:11:24,766 | INFO     | [job] validate thread has finished
[2026-03-14 05:13:18] 2026-03-14 04:11:24,767 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 05:13:18] 2026-03-14 04:11:24,769 | INFO     | [data] control thread has finished
[2026-03-14 05:13:18] 2026-03-14 04:11:24,827 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 05:13:18] 2026-03-14 04:11:24,847 | INFO     | [payload] validate_post thread has finished
[2026-03-14 05:13:18] 2026-03-14 04:11:24,965 | INFO     | [job] control thread has finished
[2026-03-14 05:13:18] 2026-03-14 04:11:24,972 | INFO     | [data] copytool_out thread has finished
[2026-03-14 05:13:18] 2026-03-14 04:11:25,047 | INFO     | [data] copytool_in thread has finished
[2026-03-14 05:13:18] 2026-03-14 04:11:25,571 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 05:13:18] 2026-03-14 04:11:26,577 | INFO     | [job] queue monitor thread has finished
[2026-03-14 05:13:18] 2026-03-14 04:11:28,612 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 05:13:18] 2026-03-14 04:11:52,658 | INFO     | PID=1147772 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-14 05:13:18] 2026-03-14 04:11:52,659 | INFO     | .. there are 6 such processes running
[2026-03-14 05:13:18] 2026-03-14 04:11:52,659 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 05:13:18] 2026-03-14 04:11:52,659 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 05:13:18] 2026-03-14 04:11:52,659 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 05:13:18] 2026-03-14 04:12:02,940 | INFO     | [monitor] cgroup control has ended
[2026-03-14 05:13:18] 2026-03-14 04:12:04,961 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22400968419136)>', '<ExcThread(monitor, started 22400653555456)>']
[2026-03-14 05:13:18] 2026-03-14 04:12:05,724 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 05:13:18] 2026-03-14 04:12:05,725 | INFO     | [monitor] control thread has ended
[2026-03-14 05:13:18] 2026-03-14 04:12:09,986 | INFO     | all workflow threads have been joined
[2026-03-14 05:13:18] 2026-03-14 04:12:09,986 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 05:13:18] 2026-03-14 04:12:09,986 | INFO     | traces error code: 0
[2026-03-14 05:13:18] 2026-03-14 04:12:09,987 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 05:13:18] 2026-03-14 04:12:10,099 [wrapper] ==== pilot stdout END ====
[2026-03-14 05:13:18] 2026-03-14 04:12:10,101 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 05:13:18] 2026-03-14 04:12:10,104 [wrapper] pilotpid: 1147772
[2026-03-14 05:13:18] 2026-03-14 04:12:10,106 [wrapper] Pilot exit status: 0
[2026-03-14 05:13:18] 2026-03-14 04:12:10,114 [wrapper] pandaids: 7042431053
[2026-03-14 05:13:18] 2026-03-14 04:12:10,160 [wrapper] cleanup supervisor_pilot 1281375 1147773
[2026-03-14 05:13:18] 2026-03-14 04:12:10,162 [wrapper] Test setup, not cleaning
[2026-03-14 05:13:18] 2026-03-14 04:12:10,165 [wrapper] apfmon messages muted
[2026-03-14 05:13:18] 2026-03-14 04:12:10,167 [wrapper] ==== wrapper stdout END ====
[2026-03-14 05:13:18] 2026-03-14 04:12:10,169 [wrapper] ==== wrapper stderr END ====
[2026-03-14 05:13:18]  *** Error codes and diagnostics ***
[2026-03-14 05:13:18]     "exeErrorCode": 0,
[2026-03-14 05:13:18]     "exeErrorDiag": "",
[2026-03-14 05:13:18]     "pilotErrorCode": 0,
[2026-03-14 05:13:18]     "pilotErrorDiag": "",
[2026-03-14 05:13:18]  *** Listing of results directory ***
[2026-03-14 05:13:18] total 618348
[2026-03-14 05:13:18] -rw-r--r--. 1 boinc boinc    602657 Feb  3 12:11 pilot3.tar.gz
[2026-03-14 05:13:18] -rw-r--r--. 1 boinc boinc      5111 Mar 10 10:56 queuedata.json
[2026-03-14 05:13:18] -rwx------. 1 boinc boinc     36322 Mar 10 10:56 runpilot2-wrapper.sh
[2026-03-14 05:13:18] -rw-r--r--. 1 boinc boinc       100 Mar 14 01:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 05:13:18] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 01:35 run_atlas
[2026-03-14 05:13:18] -rw-r--r--. 1 boinc boinc       105 Mar 14 01:35 job.xml
[2026-03-14 05:13:18] -rw-r--r--. 1 boinc boinc      6346 Mar 14 01:35 init_data.xml
[2026-03-14 05:13:18] -rw-r--r--. 2 boinc boinc 435550298 Mar 14 01:35 EVNT.46701403._000099.pool.root.1
[2026-03-14 05:13:18] -rw-r--r--. 2 boinc boinc     15845 Mar 14 01:35 start_atlas.sh
[2026-03-14 05:13:18] drwxrwx--x. 2 boinc boinc      4096 Mar 14 01:35 shared
[2026-03-14 05:13:18] -rw-r--r--. 2 boinc boinc    616313 Mar 14 01:35 input.tar.gz
[2026-03-14 05:13:18] -rw-r--r--. 1 boinc boinc         0 Mar 14 01:35 boinc_lockfile
[2026-03-14 05:13:18] -rw-r--r--. 1 boinc boinc      2562 Mar 14 01:35 pandaJob.out
[2026-03-14 05:13:18] -rw-------. 1 boinc boinc   1006713 Mar 14 01:35 agis_schedconf.cvmfs.json
[2026-03-14 05:13:18] -rw-------. 1 boinc boinc       452 Mar 14 01:35 workernode_map.json
[2026-03-14 05:13:18] drwx------. 7 boinc boinc      4096 Mar 14 01:35 pilot3
[2026-03-14 05:13:18] -rw-------. 1 boinc boinc 189146606 Mar 14 05:10 HITS.48955006._041576.pool.root.1
[2026-03-14 05:13:18] -rw-r--r--. 1 boinc boinc       530 Mar 14 05:10 boinc_task_state.xml
[2026-03-14 05:13:18] -rw-------. 1 boinc boinc        95 Mar 14 05:11 pilot_heartbeat.json
[2026-03-14 05:13:18] -rw-------. 1 boinc boinc      1031 Mar 14 05:11 memory_monitor_summary.json
[2026-03-14 05:13:18] -rw-------. 1 boinc boinc   1511579 Mar 14 05:11 agis_ddmendpoints.agis.ALL.json
[2026-03-14 05:13:18] -rw-------. 1 boinc boinc    424378 Mar 14 05:11 log.48955006._041576.job.log.tgz.1
[2026-03-14 05:13:18] -rw-------. 1 boinc boinc      6405 Mar 14 05:11 heartbeat.json
[2026-03-14 05:13:18] -rw-------. 1 boinc boinc      4829 Mar 14 05:12 pilotlog.txt
[2026-03-14 05:13:18] -rw-------. 1 boinc boinc   1833544 Mar 14 05:12 log.48955006._041576.job.log.1
[2026-03-14 05:13:18] -rw-------. 1 boinc boinc       357 Mar 14 05:12 output.list
[2026-03-14 05:13:18] -rw-r--r--. 1 boinc boinc       620 Mar 14 05:12 runtime_log
[2026-03-14 05:13:18] -rw-------. 1 boinc boinc   2273280 Mar 14 05:12 result.tar.gz
[2026-03-14 05:13:18] -rw-------. 1 boinc boinc       664 Mar 14 05:12 uZqNDmr08J9n9Rq4apOajLDm4fhM0noT9bVooX4SDmfscLDmOQ3PGo.diag
[2026-03-14 05:13:18] -rw-r--r--. 1 boinc boinc      9200 Mar 14 05:12 runtime_log.err
[2026-03-14 05:13:18] -rw-r--r--. 1 boinc boinc        27 Mar 14 05:13 wrapper_checkpoint.txt
[2026-03-14 05:13:18] -rw-r--r--. 1 boinc boinc      8192 Mar 14 05:13 boinc_mmap_file
[2026-03-14 05:13:18] -rw-r--r--. 1 boinc boinc     21154 Mar 14 05:13 stderr.txt
[2026-03-14 05:13:18] HITS file was successfully produced:
[2026-03-14 05:13:18] -rw-------. 1 boinc boinc 189146606 Mar 14 05:10 shared/HITS.pool.root.1
[2026-03-14 05:13:18]  *** Contents of shared directory: ***
[2026-03-14 05:13:18] total 612908
[2026-03-14 05:13:18] -rw-r--r--. 2 boinc boinc 435550298 Mar 14 01:35 ATLAS.root_0
[2026-03-14 05:13:18] -rw-r--r--. 2 boinc boinc     15845 Mar 14 01:35 start_atlas.sh
[2026-03-14 05:13:18] -rw-r--r--. 2 boinc boinc    616313 Mar 14 01:35 input.tar.gz
[2026-03-14 05:13:18] -rw-------. 1 boinc boinc 189146606 Mar 14 05:10 HITS.pool.root.1
[2026-03-14 05:13:18] -rw-------. 1 boinc boinc   2273280 Mar 14 05:12 result.tar.gz
05:13:20 (1144141): run_atlas exited; CPU time 48935.258051
05:13:20 (1144141): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN