Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:53:15 (18454): wrapper (7.7.26015): starting
08:53:15 (18454): wrapper: running run_atlas (--nthreads 8)
[2026-03-10 08:53:15] Arguments: --nthreads 8
[2026-03-10 08:53:15] Threads: 8
[2026-03-10 08:53:15] Checking for CVMFS
[2026-03-10 08:53:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-10 08:53:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-10 08:53:15] Running cvmfs_config stat atlas.cern.ch
[2026-03-10 08:53:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-10 08:53:16] 2.11.2.0 10718 267495 158276 157115 1 188 9764874 18432001 1833 130560 0 171307470 99.982 9822333 27072 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-10 08:53:16] CVMFS is ok
[2026-03-10 08:53:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 08:53:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 08:53:16] Further information can be found at the LHC@home message board.
[2026-03-10 08:53:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 08:53:16] Checking for apptainer binary...
[2026-03-10 08:53:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-10 08:53:16] Running /usr/bin/apptainer --version
[2026-03-10 08:53:16] apptainer version 1.3.2-1.el7
[2026-03-10 08:53:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 08:53:16] c-206-2.aglt2.org
[2026-03-10 08:53:16] apptainer works
[2026-03-10 08:53:16] Set ATHENA_PROC_NUMBER=8
[2026-03-10 08:53:16] Set ATHENA_CORE_NUMBER=8
[2026-03-10 08:53:16] Starting ATLAS job with PandaID=7035900990
[2026-03-10 08:53:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
10:12:49 (21836): wrapper (7.7.26015): starting
10:12:49 (21836): wrapper: running run_atlas (--nthreads 8)
[2026-03-10 10:12:49] Arguments: --nthreads 8
[2026-03-10 10:12:49] Threads: 8
[2026-03-10 10:12:49] This job has been restarted, cleaning up previous attempt
[2026-03-10 10:12:49] Checking for CVMFS
[2026-03-10 10:12:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-10 10:12:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-10 10:12:49] Running cvmfs_config stat atlas.cern.ch
[2026-03-10 10:12:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-10 10:12:49] 2.11.2.0 10718 267575 157324 157116 2 11 9777723 18432001 1 130560 0 171360533 99.982 9823682 27073 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-10 10:12:49] CVMFS is ok
[2026-03-10 10:12:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 10:12:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 10:12:49] Further information can be found at the LHC@home message board.
[2026-03-10 10:12:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 10:12:49] Checking for apptainer binary...
[2026-03-10 10:12:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-10 10:12:49] Running /usr/bin/apptainer --version
[2026-03-10 10:12:49] apptainer version 1.3.2-1.el7
[2026-03-10 10:12:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 10:12:50] c-206-2.aglt2.org
[2026-03-10 10:12:50] apptainer works
[2026-03-10 10:12:50] Set ATHENA_PROC_NUMBER=8
[2026-03-10 10:12:50] Set ATHENA_CORE_NUMBER=8
[2026-03-10 10:12:50] Starting ATLAS job with PandaID=7035900990
[2026-03-10 10:12:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 20:30:09]  *** The last 200 lines of the pilot log: ***
[2026-03-10 20:30:09] 2026-03-11 00:29:46,313 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 20:30:09] 2026-03-11 00:29:46,313 | INFO     | log transfer has been attempted: DONE
[2026-03-10 20:30:09] 2026-03-11 00:29:46,313 | INFO     | job 7035900990 has finished - writing final server update
[2026-03-10 20:30:09] 2026-03-11 00:29:46,314 | INFO     | total number of processed events: 400 (read)
[2026-03-10 20:30:09] 2026-03-11 00:29:46,318 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7035900990/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 20:30:09] 2026-03-11 00:29:46,319 | INFO     | extracted standard info from prmon json
[2026-03-10 20:30:09] 2026-03-11 00:29:46,319 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 20:30:09] 2026-03-11 00:29:46,320 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 20:30:09] 2026-03-11 00:29:46,320 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 20:30:09] 2026-03-11 00:29:46,320 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 20:30:09] 2026-03-11 00:29:46,336 | INFO     | fitting pss+swap vs Time
[2026-03-10 20:30:09] 2026-03-11 00:29:46,337 | INFO     | sum of square deviations: 69349497488.0
[2026-03-10 20:30:09] 2026-03-11 00:29:46,350 | INFO     | sum of deviations: 190447678795.0
[2026-03-10 20:30:09] 2026-03-11 00:29:46,351 | INFO     | mean x: 1773170488.0
[2026-03-10 20:30:09] 2026-03-11 00:29:46,351 | INFO     | mean y: 2511659.087314662
[2026-03-10 20:30:09] 2026-03-11 00:29:46,351 | INFO     | intersect: -4866971405.38379
[2026-03-10 20:30:09] 2026-03-11 00:29:46,352 | INFO     | chi2: 2.348756923411498
[2026-03-10 20:30:09] 2026-03-11 00:29:46,353 | INFO     | sum of square deviations: 67649828410.5
[2026-03-10 20:30:09] 2026-03-11 00:29:46,367 | INFO     | sum of deviations: 229304859965.0
[2026-03-10 20:30:09] 2026-03-11 00:29:46,367 | INFO     | mean x: 1773170335.5
[2026-03-10 20:30:09] 2026-03-11 00:29:46,367 | INFO     | mean y: 2515121.1794019933
[2026-03-10 20:30:09] 2026-03-11 00:29:46,367 | INFO     | intersect: -6007796878.559703
[2026-03-10 20:30:09] 2026-03-11 00:29:46,368 | INFO     | chi2: 1.5806572627813986
[2026-03-10 20:30:09] 2026-03-11 00:29:46,369 | INFO     | current chi2=1.5806572627813986 (change=32.7023904846849 %)
[2026-03-10 20:30:09] 2026-03-11 00:29:46,370 | INFO     | sum of square deviations: 65978159858.0
[2026-03-10 20:30:09] 2026-03-11 00:29:46,383 | INFO     | sum of deviations: 227002164438.0
[2026-03-10 20:30:09] 2026-03-11 00:29:46,383 | INFO     | mean x: 1773170183.0
[2026-03-10 20:30:09] 2026-03-11 00:29:46,383 | INFO     | mean y: 2514911.110552764
[2026-03-10 20:30:09] 2026-03-11 00:29:46,383 | INFO     | intersect: -6098192812.842723
[2026-03-10 20:30:09] 2026-03-11 00:29:46,384 | INFO     | chi2: 1.58026708695037
[2026-03-10 20:30:09] 2026-03-11 00:29:46,384 | INFO     | current chi2=1.58026708695037 (change=0.02468440440667983 %)
[2026-03-10 20:30:09] 2026-03-11 00:29:46,385 | INFO     | right removable region: 596
[2026-03-10 20:30:09] 2026-03-11 00:29:46,386 | INFO     | sum of square deviations: 67649828410.5
[2026-03-10 20:30:09] 2026-03-11 00:29:46,398 | INFO     | sum of deviations: 91718331657.49997
[2026-03-10 20:30:09] 2026-03-11 00:29:46,398 | INFO     | mean x: 1773170640.5
[2026-03-10 20:30:09] 2026-03-11 00:29:46,398 | INFO     | mean y: 2520489.898671096
[2026-03-10 20:30:09] 2026-03-11 00:29:46,399 | INFO     | intersect: -2401510040.7312975
[2026-03-10 20:30:09] 2026-03-11 00:29:46,400 | INFO     | chi2: 0.9710662598059847
[2026-03-10 20:30:09] 2026-03-11 00:29:46,400 | INFO     | current chi2=0.9710662598059847 (change=58.65616189879963 %)
[2026-03-10 20:30:09] 2026-03-11 00:29:46,401 | INFO     | sum of square deviations: 65978159858.0
[2026-03-10 20:30:09] 2026-03-11 00:29:46,411 | INFO     | sum of deviations: 56432434985.00002
[2026-03-10 20:30:09] 2026-03-11 00:29:46,411 | INFO     | mean x: 1773170793.0
[2026-03-10 20:30:09] 2026-03-11 00:29:46,411 | INFO     | mean y: 2523708.91959799
[2026-03-10 20:30:09] 2026-03-11 00:29:46,411 | INFO     | intersect: -1514104607.3086
[2026-03-10 20:30:09] 2026-03-11 00:29:46,412 | INFO     | chi2: 0.8667191932805774
[2026-03-10 20:30:09] 2026-03-11 00:29:46,412 | INFO     | current chi2=0.8667191932805774 (change=10.745617559223549 %)
[2026-03-10 20:30:09] 2026-03-11 00:29:46,412 | INFO     | left removable region: 20
[2026-03-10 20:30:09] 2026-03-11 00:29:46,413 | INFO     | sum of square deviations: 59257669200.0
[2026-03-10 20:30:09] 2026-03-11 00:29:46,425 | INFO     | sum of deviations: 57939709056.00001
[2026-03-10 20:30:09] 2026-03-11 00:29:46,425 | INFO     | mean x: 1773170762.5
[2026-03-10 20:30:09] 2026-03-11 00:29:46,425 | INFO     | mean y: 2530714.6805555555
[2026-03-10 20:30:09] 2026-03-11 00:29:46,426 | INFO     | intersect: -1731202647.9852796
[2026-03-10 20:30:09] 2026-03-11 00:29:46,427 | INFO     | chi2: 0.004533002870471103
[2026-03-10 20:30:09] 2026-03-11 00:29:46,427 | INFO     | current memory leak: 0.98 B/s (using 576 data points, chi2=0.00)
[2026-03-10 20:30:09] 2026-03-11 00:29:46,428 | INFO     | could have reported an average CPU frequency of 2439 MHz (24 samples)
[2026-03-10 20:30:09] 2026-03-11 00:29:46,428 | INFO     | ..............................
[2026-03-10 20:30:09] 2026-03-11 00:29:46,428 | INFO     | . Timing measurements:
[2026-03-10 20:30:09] 2026-03-11 00:29:46,428 | INFO     | . get job = 0 s
[2026-03-10 20:30:09] 2026-03-11 00:29:46,428 | INFO     | . initial setup = 1 s
[2026-03-10 20:30:09] 2026-03-11 00:29:46,429 | INFO     | . payload setup = 6 s
[2026-03-10 20:30:09] 2026-03-11 00:29:46,429 | INFO     | . stage-in = 0 s
[2026-03-10 20:30:09] 2026-03-11 00:29:46,429 | INFO     | . payload execution = 36972 s
[2026-03-10 20:30:09] 2026-03-11 00:29:46,430 | INFO     | . stage-out = 2 s
[2026-03-10 20:30:09] 2026-03-11 00:29:46,430 | INFO     | . log creation = 0 s
[2026-03-10 20:30:09] 2026-03-11 00:29:46,430 | INFO     | ..............................
[2026-03-10 20:30:09] 2026-03-11 00:29:46,634 | INFO     | time since job start (37004s) is within the limit (349056.0s)
[2026-03-10 20:30:09] 2026-03-11 00:29:46,803 | INFO     | 
[2026-03-10 20:30:09] 2026-03-11 00:29:46,804 | INFO     | job summary report
[2026-03-10 20:30:09] 2026-03-11 00:29:46,804 | INFO     | --------------------------------------------------
[2026-03-10 20:30:09] 2026-03-11 00:29:46,804 | INFO     | PanDA job id: 7035900990
[2026-03-10 20:30:09] 2026-03-11 00:29:46,804 | INFO     | task id: 48846626
[2026-03-10 20:30:09] 2026-03-11 00:29:46,804 | INFO     | errors: (none)
[2026-03-10 20:30:09] 2026-03-11 00:29:46,805 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 20:30:09] 2026-03-11 00:29:46,805 | INFO     | pilot state: finished 
[2026-03-10 20:30:09] 2026-03-11 00:29:46,805 | INFO     | transexitcode: 0
[2026-03-10 20:30:09] 2026-03-11 00:29:46,805 | INFO     | exeerrorcode: 0
[2026-03-10 20:30:09] 2026-03-11 00:29:46,805 | INFO     | exeerrordiag: 
[2026-03-10 20:30:09] 2026-03-11 00:29:46,805 | INFO     | exitcode: 0
[2026-03-10 20:30:09] 2026-03-11 00:29:46,805 | INFO     | exitmsg: OK
[2026-03-10 20:30:09] 2026-03-11 00:29:46,806 | INFO     | cpuconsumptiontime: 284300 s
[2026-03-10 20:30:09] 2026-03-11 00:29:46,806 | INFO     | nevents: 400
[2026-03-10 20:30:09] 2026-03-11 00:29:46,806 | INFO     | neventsw: 0
[2026-03-10 20:30:09] 2026-03-11 00:29:46,806 | INFO     | pid: 7742
[2026-03-10 20:30:09] 2026-03-11 00:29:46,806 | INFO     | pgrp: 7742
[2026-03-10 20:30:09] 2026-03-11 00:29:46,806 | INFO     | corecount: 8
[2026-03-10 20:30:09] 2026-03-11 00:29:46,807 | INFO     | event service: False
[2026-03-10 20:30:09] 2026-03-11 00:29:46,807 | INFO     | sizes: {0: 2279937, 1: 2280398, 11: 2280398, 36983: 2321216, 36987: 2330214, 36990: 2330270, 36993: 2330592}
[2026-03-10 20:30:09] 2026-03-11 00:29:46,807 | INFO     | --------------------------------------------------
[2026-03-10 20:30:09] 2026-03-11 00:29:46,807 | INFO     | 
[2026-03-10 20:30:09] 2026-03-11 00:29:46,807 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-10 20:30:09] 2026-03-11 00:29:46,826 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 20:30:09] 2026-03-11 00:29:46,827 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 20:30:09] 2026-03-11 00:29:46,827 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 20:30:09] 2026-03-11 00:29:46,827 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 20:30:09] 2026-03-11 00:29:46,827 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 20:30:09] 2026-03-11 00:29:46,827 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 20:30:09] 2026-03-11 00:29:46,827 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 20:30:09] 2026-03-11 00:29:46,828 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 20:30:09] 2026-03-11 00:29:46,828 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 20:30:09] 2026-03-11 00:29:46,828 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 20:30:09] 2026-03-11 00:29:46,828 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 20:30:09] 2026-03-11 00:29:46,828 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 20:30:09] 2026-03-11 00:29:46,828 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 20:30:09] 2026-03-11 00:29:46,829 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 20:30:09] 2026-03-11 00:29:46,829 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 20:30:09] 2026-03-11 00:29:46,829 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 20:30:09] 2026-03-11 00:29:46,829 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 20:30:09] 2026-03-11 00:29:46,829 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 20:30:09] 2026-03-11 00:29:46,829 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 20:30:09] 2026-03-11 00:29:46,830 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 20:30:09] 2026-03-11 00:29:46,830 | INFO     | job 7035900990 has completed (purged errors)
[2026-03-10 20:30:09] 2026-03-11 00:29:46,830 | INFO     | overall cleanup function is called
[2026-03-10 20:30:09] 2026-03-11 00:29:47,838 | INFO     | --- collectZombieJob: --- 10, [7742]
[2026-03-10 20:30:09] 2026-03-11 00:29:47,839 | INFO     | zombie collector waiting for pid 7742
[2026-03-10 20:30:09] 2026-03-11 00:29:47,839 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 20:30:09] 2026-03-11 00:29:47,839 | INFO     | collected zombie processes
[2026-03-10 20:30:09] 2026-03-11 00:29:47,839 | INFO     | will attempt to kill all subprocesses of pid=7742
[2026-03-10 20:30:09] 2026-03-11 00:29:47,997 | INFO     | process IDs to be killed: [7742] (in reverse order)
[2026-03-10 20:30:09] 2026-03-11 00:29:48,054 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 20:30:09] 2026-03-11 00:29:48,055 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 20:30:09] 2026-03-11 00:29:48,057 | INFO     | did not find any defunct processes belonging to 7742
[2026-03-10 20:30:09] 2026-03-11 00:29:48,060 | INFO     | did not find any defunct processes belonging to 7742
[2026-03-10 20:30:09] 2026-03-11 00:29:48,060 | INFO     | ready for new job
[2026-03-10 20:30:09] 2026-03-11 00:29:48,060 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 20:30:09] 2026-03-11 00:29:48,062 | INFO     | **************************************
[2026-03-10 20:30:09] 2026-03-11 00:29:48,062 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 20:30:09] 2026-03-11 00:29:48,063 | INFO     | **************************************
[2026-03-10 20:30:09] 2026-03-11 00:29:48,063 | INFO     | 
[2026-03-10 20:30:09] 2026-03-11 00:29:48,064 | INFO     | architecture information:
[2026-03-10 20:30:09] 2026-03-11 00:29:48,064 | INFO     | executing command: cat /etc/os-release
[2026-03-10 20:30:09] 2026-03-11 00:29:48,080 | INFO     | cat /etc/os-release:
[2026-03-10 20:30:09] NAME="CentOS Linux"
[2026-03-10 20:30:09] VERSION="7 (Core)"
[2026-03-10 20:30:09] ID="centos"
[2026-03-10 20:30:09] ID_LIKE="rhel fedora"
[2026-03-10 20:30:09] VERSION_ID="7"
[2026-03-10 20:30:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 20:30:09] ANSI_COLOR="0;31"
[2026-03-10 20:30:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 20:30:09] HOME_URL="https://www.centos.org/"
[2026-03-10 20:30:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 20:30:09] 
[2026-03-10 20:30:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 20:30:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 20:30:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 20:30:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 20:30:09] 
[2026-03-10 20:30:09] 2026-03-11 00:29:48,080 | INFO     | **************************************
[2026-03-10 20:30:09] 2026-03-11 00:29:48,583 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-10 20:30:09] 2026-03-11 00:29:48,600 | INFO     | sufficient remaining disk space (27758952448 B)
[2026-03-10 20:30:09] 2026-03-11 00:29:48,600 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 20:30:09] 2026-03-11 00:29:48,601 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 20:30:09] 2026-03-11 00:29:48,601 | INFO     | update_server=False
[2026-03-10 20:30:09] 2026-03-11 00:29:48,601 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 20:30:09] 2026-03-11 00:29:48,601 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-10 20:30:09] 2026-03-11 00:29:48,602 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 20:30:09] 2026-03-11 00:29:48,602 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 20:30:09] 2026-03-11 00:29:48,602 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 20:30:09] 2026-03-11 00:29:48,735 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 20:30:09] 2026-03-11 00:29:49,035 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 20:30:09] 2026-03-11 00:29:49,035 | INFO     | aborting loop
[2026-03-10 20:30:09] 2026-03-11 00:29:49,091 | INFO     | all job control threads have been joined
[2026-03-10 20:30:09] 2026-03-11 00:29:49,179 | INFO     | all data control threads have been joined
[2026-03-10 20:30:09] 2026-03-11 00:29:49,530 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 20:30:09] 2026-03-11 00:29:49,607 | INFO     | [job] retrieve thread has finished
[2026-03-10 20:30:09] 2026-03-11 00:29:50,035 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 20:30:09] 2026-03-11 00:29:50,041 | INFO     | [job] job monitor thread has finished
[2026-03-10 20:30:09] 2026-03-11 00:29:50,096 | INFO     | [job] control thread has finished
[2026-03-10 20:30:09] 2026-03-11 00:29:50,097 | INFO     | all payload control threads have been joined
[2026-03-10 20:30:09] 2026-03-11 00:29:50,182 | INFO     | [data] copytool_in thread has finished
[2026-03-10 20:30:09] 2026-03-11 00:29:50,185 | INFO     | [job] validate thread has finished
[2026-03-10 20:30:09] 2026-03-11 00:29:50,185 | INFO     | [data] control thread has finished
[2026-03-10 20:30:09] 2026-03-11 00:29:50,187 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 20:30:09] 2026-03-11 00:29:50,237 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 20:30:09] 2026-03-11 00:29:50,492 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 20:30:09] 2026-03-11 00:29:50,743 | INFO     | [data] copytool_out thread has finished
[2026-03-10 20:30:09] 2026-03-11 00:29:50,896 | INFO     | [payload] validate_post thread has finished
[2026-03-10 20:30:09] 2026-03-11 00:29:51,102 | INFO     | [payload] control thread has finished
[2026-03-10 20:30:09] 2026-03-11 00:29:51,135 | INFO     | [payload] failed_post thread has finished
[2026-03-10 20:30:09] 2026-03-11 00:29:51,594 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 20:30:09] 2026-03-11 00:29:52,599 | INFO     | [job] queue monitor thread has finished
[2026-03-10 20:30:09] 2026-03-11 00:29:53,536 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 20:30:09] 2026-03-11 00:30:03,927 | INFO     | [monitor] cgroup control has ended
[2026-03-10 20:30:09] 2026-03-11 00:30:04,658 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140052891825984)>', '<ExcThread(monitor, started 140052105524992)>']
[2026-03-10 20:30:09] 2026-03-11 00:30:04,680 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 20:30:09] 2026-03-11 00:30:04,680 | INFO     | [monitor] control thread has ended
[2026-03-10 20:30:09] 2026-03-11 00:30:09,684 | INFO     | all workflow threads have been joined
[2026-03-10 20:30:09] 2026-03-11 00:30:09,684 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 20:30:09] 2026-03-11 00:30:09,685 | INFO     | traces error code: 0
[2026-03-10 20:30:09] 2026-03-11 00:30:09,685 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 20:30:09] 2026-03-11 00:30:09,782 [wrapper] ==== pilot stdout END ====
[2026-03-10 20:30:09] 2026-03-11 00:30:09,785 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 20:30:09] 2026-03-11 00:30:09,787 [wrapper] pilotpid: 402
[2026-03-10 20:30:09] 2026-03-11 00:30:09,789 [wrapper] Pilot exit status: 0
[2026-03-10 20:30:09] 2026-03-11 00:30:09,814 [wrapper] pandaids: 7035900990 7035900990
[2026-03-10 20:30:09] 2026-03-11 00:30:09,841 [wrapper] cleanup supervisor_pilot 17391 405
[2026-03-10 20:30:09] 2026-03-11 00:30:09,843 [wrapper] Test setup, not cleaning
[2026-03-10 20:30:09] 2026-03-11 00:30:09,846 [wrapper] apfmon messages muted
[2026-03-10 20:30:09] 2026-03-11 00:30:09,848 [wrapper] ==== wrapper stdout END ====
[2026-03-10 20:30:09] 2026-03-11 00:30:09,851 [wrapper] ==== wrapper stderr END ====
[2026-03-10 20:30:09]  *** Error codes and diagnostics ***
[2026-03-10 20:30:09]     "exeErrorCode": 0,
[2026-03-10 20:30:09]     "exeErrorDiag": "",
[2026-03-10 20:30:09]     "pilotErrorCode": 0,
[2026-03-10 20:30:09]     "pilotErrorDiag": "",
[2026-03-10 20:30:09]  *** Listing of results directory ***
[2026-03-10 20:30:09] total 863476
[2026-03-10 20:30:09] drwx------ 5 boincer umatlas      4096 Feb  2 10:00 pilot3
[2026-03-10 20:30:09] -rw-r--r-- 1 boincer umatlas    584627 Mar  2 02:34 pilot3.tar.gz
[2026-03-10 20:30:09] -rwx------ 1 boincer umatlas     36322 Mar  2 02:34 runpilot2-wrapper.sh
[2026-03-10 20:30:09] -rw-r--r-- 1 boincer umatlas      5111 Mar  2 02:35 queuedata.json
[2026-03-10 20:30:09] -rw-r--r-- 1 boincer umatlas       100 Mar 10 08:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 20:30:09] -rwxr-xr-x 1 boincer umatlas      7986 Mar 10 08:53 run_atlas
[2026-03-10 20:30:09] -rw-r--r-- 1 boincer umatlas       105 Mar 10 08:53 job.xml
[2026-03-10 20:30:09] -rw-r--r-- 3 boincer umatlas 277315371 Mar 10 08:53 EVNT.48452081._000002.pool.root.1
[2026-03-10 20:30:09] -rw-r--r-- 3 boincer umatlas 277315371 Mar 10 08:53 ATLAS.root_0
[2026-03-10 20:30:09] -rw-r--r-- 2 boincer umatlas     15845 Mar 10 08:53 start_atlas.sh
[2026-03-10 20:30:09] drwxrwx--x 2 boincer umatlas      4096 Mar 10 08:53 shared
[2026-03-10 20:30:09] -rw-r--r-- 2 boincer umatlas    597987 Mar 10 08:53 input.tar.gz
[2026-03-10 20:30:09] -rw-r--r-- 1 boincer umatlas         0 Mar 10 08:53 boinc_lockfile
[2026-03-10 20:30:09] -rw-r--r-- 1 boincer umatlas      2681 Mar 10 10:12 pandaJob.out
[2026-03-10 20:30:09] -rw------- 1 boincer umatlas        57 Mar 10 10:12 setup.sh.local
[2026-03-10 20:30:09] -rw------- 1 boincer umatlas   1006729 Mar 10 10:13 agis_schedconf.cvmfs.json
[2026-03-10 20:30:09] -rw------- 1 boincer umatlas       434 Mar 10 10:13 workernode_map.json
[2026-03-10 20:30:09] -rw------- 1 boincer umatlas 313799387 Mar 10 20:28 HITS.48846626._000041.pool.root.1
[2026-03-10 20:30:09] -rw-r--r-- 1 boincer umatlas       532 Mar 10 20:29 boinc_task_state.xml
[2026-03-10 20:30:09] -rw------- 1 boincer umatlas        96 Mar 10 20:29 pilot_heartbeat.json
[2026-03-10 20:30:09] -rw------- 1 boincer umatlas      1066 Mar 10 20:29 memory_monitor_summary.json
[2026-03-10 20:30:09] -rw------- 1 boincer umatlas   1511578 Mar 10 20:29 agis_ddmendpoints.agis.ALL.json
[2026-03-10 20:30:09] -rw------- 1 boincer umatlas    787000 Mar 10 20:29 log.48846626._000041.job.log.tgz.1
[2026-03-10 20:30:09] -rw------- 1 boincer umatlas      6404 Mar 10 20:29 heartbeat.json
[2026-03-10 20:30:09] -rw-r--r-- 1 boincer umatlas      5952 Mar 10 20:29 init_data.xml
[2026-03-10 20:30:09] -rw-r--r-- 1 boincer umatlas      8192 Mar 10 20:30 boinc_mmap_file
[2026-03-10 20:30:09] -rw-r--r-- 1 boincer umatlas        29 Mar 10 20:30 wrapper_checkpoint.txt
[2026-03-10 20:30:09] -rw------- 1 boincer umatlas      4548 Mar 10 20:30 pilotlog.txt
[2026-03-10 20:30:09] -rw------- 1 boincer umatlas   5128340 Mar 10 20:30 log.48846626._000041.job.log.1
[2026-03-10 20:30:09] -rw------- 1 boincer umatlas       357 Mar 10 20:30 output.list
[2026-03-10 20:30:09] -rw-r--r-- 1 boincer umatlas       620 Mar 10 20:30 runtime_log
[2026-03-10 20:30:09] -rw------- 1 boincer umatlas   5928960 Mar 10 20:30 result.tar.gz
[2026-03-10 20:30:09] -rw-r--r-- 1 boincer umatlas      9422 Mar 10 20:30 runtime_log.err
[2026-03-10 20:30:09] -rw------- 1 boincer umatlas       789 Mar 10 20:30 dg2NDmuyCH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmvxALDmoQ4F0n.diag
[2026-03-10 20:30:09] -rw-r--r-- 1 boincer umatlas     23124 Mar 10 20:30 stderr.txt
[2026-03-10 20:30:09] HITS file was successfully produced:
[2026-03-10 20:30:09] -rw------- 1 boincer umatlas 313799387 Mar 10 20:28 shared/HITS.pool.root.1
[2026-03-10 20:30:09]  *** Contents of shared directory: ***
[2026-03-10 20:30:09] total 583660
[2026-03-10 20:30:09] -rw-r--r-- 3 boincer umatlas 277315371 Mar 10 08:53 ATLAS.root_0
[2026-03-10 20:30:09] -rw-r--r-- 2 boincer umatlas     15845 Mar 10 08:53 start_atlas.sh
[2026-03-10 20:30:09] -rw-r--r-- 2 boincer umatlas    597987 Mar 10 08:53 input.tar.gz
[2026-03-10 20:30:09] -rw------- 1 boincer umatlas 313799387 Mar 10 20:28 HITS.pool.root.1
[2026-03-10 20:30:09] -rw------- 1 boincer umatlas   5928960 Mar 10 20:30 result.tar.gz
20:30:11 (21836): run_atlas exited; CPU time 284802.454691
20:30:11 (21836): called boinc_finish(0)

</stderr_txt>
]]>

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