Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:52:29 (15608): wrapper (7.7.26015): starting
07:52:29 (15608): wrapper: running run_atlas (--nthreads 8)
[2026-03-10 07:52:29] Arguments: --nthreads 8
[2026-03-10 07:52:29] Threads: 8
[2026-03-10 07:52:29] Checking for CVMFS
[2026-03-10 07:52:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-10 07:52:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-10 07:52:30] Running cvmfs_config stat atlas.cern.ch
[2026-03-10 07:52:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-10 07:52:30] 2.11.2.0 5524 267409 147344 157113 2 188 18430707 18432000 1315 130560 0 173439744 99.983 9924659 27740 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-10 07:52:30] CVMFS is ok
[2026-03-10 07:52:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 07:52:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 07:52:30] Further information can be found at the LHC@home message board.
[2026-03-10 07:52:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 07:52:30] Checking for apptainer binary...
[2026-03-10 07:52:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-10 07:52:30] Running /usr/bin/apptainer --version
[2026-03-10 07:52:30] apptainer version 1.3.2-1.el7
[2026-03-10 07:52:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 07:52:31] c-206-5.aglt2.org
[2026-03-10 07:52:31] apptainer works
[2026-03-10 07:52:31] Set ATHENA_PROC_NUMBER=8
[2026-03-10 07:52:31] Set ATHENA_CORE_NUMBER=8
[2026-03-10 07:52:31] Starting ATLAS job with PandaID=7048426408
[2026-03-10 07:52:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 11:49:15]  *** The last 200 lines of the pilot log: ***
[2026-03-10 11:49:15] 2026-03-10 15:48:16,043 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 11:49:15] 2026-03-10 15:48:16,043 | INFO     | log transfer has been attempted: DONE
[2026-03-10 11:49:15] 2026-03-10 15:48:16,043 | INFO     | job 7048426408 has finished - writing final server update
[2026-03-10 11:49:15] 2026-03-10 15:48:16,044 | INFO     | total number of processed events: 400 (read)
[2026-03-10 11:49:15] 2026-03-10 15:48:16,048 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7048426408/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 11:49:15] 2026-03-10 15:48:16,049 | INFO     | extracted standard info from prmon json
[2026-03-10 11:49:15] 2026-03-10 15:48:16,049 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 11:49:15] 2026-03-10 15:48:16,049 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 11:49:15] 2026-03-10 15:48:16,050 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 11:49:15] 2026-03-10 15:48:16,050 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 11:49:15] 2026-03-10 15:48:16,056 | INFO     | fitting pss+swap vs Time
[2026-03-10 11:49:15] 2026-03-10 15:48:16,057 | INFO     | sum of square deviations: 3871990738.0
[2026-03-10 11:49:15] 2026-03-10 15:48:16,059 | INFO     | sum of deviations: 31613041349.5
[2026-03-10 11:49:15] 2026-03-10 15:48:16,059 | INFO     | mean x: 1773150631.5
[2026-03-10 11:49:15] 2026-03-10 15:48:16,059 | INFO     | mean y: 2489653.581896552
[2026-03-10 11:49:15] 2026-03-10 15:48:16,059 | INFO     | intersect: -14474477887.26906
[2026-03-10 11:49:15] 2026-03-10 15:48:16,060 | INFO     | chi2: 1.9788789571538934
[2026-03-10 11:49:15] 2026-03-10 15:48:16,060 | INFO     | sum of square deviations: 3627000098.0
[2026-03-10 11:49:15] 2026-03-10 15:48:16,062 | INFO     | sum of deviations: 46076158155.0
[2026-03-10 11:49:15] 2026-03-10 15:48:16,062 | INFO     | mean x: 1773150479.0
[2026-03-10 11:49:15] 2026-03-10 15:48:16,063 | INFO     | mean y: 2498487.524229075
[2026-03-10 11:49:15] 2026-03-10 15:48:16,063 | INFO     | intersect: -22522993570.793877
[2026-03-10 11:49:15] 2026-03-10 15:48:16,063 | INFO     | chi2: 1.1996209492314367
[2026-03-10 11:49:15] 2026-03-10 15:48:16,063 | INFO     | current chi2=1.1996209492314367 (change=39.37876064149059 %)
[2026-03-10 11:49:15] 2026-03-10 15:48:16,064 | INFO     | sum of square deviations: 3392567795.5
[2026-03-10 11:49:15] 2026-03-10 15:48:16,066 | INFO     | sum of deviations: 44740965999.0
[2026-03-10 11:49:15] 2026-03-10 15:48:16,066 | INFO     | mean x: 1773150326.5
[2026-03-10 11:49:15] 2026-03-10 15:48:16,066 | INFO     | mean y: 2497618.8378378376
[2026-03-10 11:49:15] 2026-03-10 15:48:16,066 | INFO     | intersect: -23381694901.73054
[2026-03-10 11:49:15] 2026-03-10 15:48:16,067 | INFO     | chi2: 1.1996080981587007
[2026-03-10 11:49:15] 2026-03-10 15:48:16,067 | INFO     | current chi2=1.1996080981587007 (change=0.0010712611132872953 %)
[2026-03-10 11:49:15] 2026-03-10 15:48:16,067 | INFO     | right removable region: 221
[2026-03-10 11:49:15] 2026-03-10 15:48:16,068 | INFO     | sum of square deviations: 3627000098.0
[2026-03-10 11:49:15] 2026-03-10 15:48:16,070 | INFO     | sum of deviations: 1287021432.0
[2026-03-10 11:49:15] 2026-03-10 15:48:16,070 | INFO     | mean x: 1773150784.0
[2026-03-10 11:49:15] 2026-03-10 15:48:16,070 | INFO     | mean y: 2508351.1453744494
[2026-03-10 11:49:15] 2026-03-10 15:48:16,070 | INFO     | intersect: -626684645.6880109
[2026-03-10 11:49:15] 2026-03-10 15:48:16,071 | INFO     | chi2: 0.8355784981680033
[2026-03-10 11:49:15] 2026-03-10 15:48:16,071 | INFO     | current chi2=0.8355784981680033 (change=57.775158751004795 %)
[2026-03-10 11:49:15] 2026-03-10 15:48:16,071 | INFO     | sum of square deviations: 3392567795.5
[2026-03-10 11:49:15] 2026-03-10 15:48:16,073 | INFO     | sum of deviations: -5129182499.0
[2026-03-10 11:49:15] 2026-03-10 15:48:16,073 | INFO     | mean x: 1773150936.5
[2026-03-10 11:49:15] 2026-03-10 15:48:16,074 | INFO     | mean y: 2512491.7477477477
[2026-03-10 11:49:15] 2026-03-10 15:48:16,074 | INFO     | intersect: 2683318093.8185115
[2026-03-10 11:49:15] 2026-03-10 15:48:16,074 | INFO     | chi2: 0.7975806237633323
[2026-03-10 11:49:15] 2026-03-10 15:48:16,074 | INFO     | current chi2=0.7975806237633323 (change=4.547493082694323 %)
[2026-03-10 11:49:15] 2026-03-10 15:48:16,075 | INFO     | left removable region: 20
[2026-03-10 11:49:15] 2026-03-10 15:48:16,075 | INFO     | sum of square deviations: 2518000700.0
[2026-03-10 11:49:15] 2026-03-10 15:48:16,077 | INFO     | sum of deviations: 9618456209.999998
[2026-03-10 11:49:15] 2026-03-10 15:48:16,077 | INFO     | mean x: 1773150906.0
[2026-03-10 11:49:15] 2026-03-10 15:48:16,077 | INFO     | mean y: 2521314.582089552
[2026-03-10 11:49:15] 2026-03-10 15:48:16,077 | INFO     | intersect: -6770699337.454593
[2026-03-10 11:49:15] 2026-03-10 15:48:16,078 | INFO     | chi2: 0.0013656321187973056
[2026-03-10 11:49:15] 2026-03-10 15:48:16,078 | INFO     | current memory leak: 3.82 B/s (using 201 data points, chi2=0.00)
[2026-03-10 11:49:15] 2026-03-10 15:48:16,079 | INFO     | could have reported an average CPU frequency of 2089 MHz (11 samples)
[2026-03-10 11:49:15] 2026-03-10 15:48:16,079 | INFO     | ..............................
[2026-03-10 11:49:15] 2026-03-10 15:48:16,079 | INFO     | . Timing measurements:
[2026-03-10 11:49:15] 2026-03-10 15:48:16,079 | INFO     | . get job = 0 s
[2026-03-10 11:49:15] 2026-03-10 15:48:16,079 | INFO     | . initial setup = 6 s
[2026-03-10 11:49:15] 2026-03-10 15:48:16,079 | INFO     | . payload setup = 4 s
[2026-03-10 11:49:15] 2026-03-10 15:48:16,080 | INFO     | . stage-in = 0 s
[2026-03-10 11:49:15] 2026-03-10 15:48:16,080 | INFO     | . payload execution = 14105 s
[2026-03-10 11:49:15] 2026-03-10 15:48:16,080 | INFO     | . stage-out = 2 s
[2026-03-10 11:49:15] 2026-03-10 15:48:16,080 | INFO     | . log creation = 0 s
[2026-03-10 11:49:15] 2026-03-10 15:48:16,080 | INFO     | ..............................
[2026-03-10 11:49:15] 2026-03-10 15:48:16,233 | INFO     | 
[2026-03-10 11:49:15] 2026-03-10 15:48:16,234 | INFO     | job summary report
[2026-03-10 11:49:15] 2026-03-10 15:48:16,234 | INFO     | --------------------------------------------------
[2026-03-10 11:49:15] 2026-03-10 15:48:16,234 | INFO     | PanDA job id: 7048426408
[2026-03-10 11:49:15] 2026-03-10 15:48:16,234 | INFO     | task id: 48997948
[2026-03-10 11:49:15] 2026-03-10 15:48:16,234 | INFO     | errors: (none)
[2026-03-10 11:49:15] 2026-03-10 15:48:16,234 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 11:49:15] 2026-03-10 15:48:16,235 | INFO     | pilot state: finished 
[2026-03-10 11:49:15] 2026-03-10 15:48:16,235 | INFO     | transexitcode: 0
[2026-03-10 11:49:15] 2026-03-10 15:48:16,235 | INFO     | exeerrorcode: 0
[2026-03-10 11:49:15] 2026-03-10 15:48:16,235 | INFO     | exeerrordiag: 
[2026-03-10 11:49:15] 2026-03-10 15:48:16,235 | INFO     | exitcode: 0
[2026-03-10 11:49:15] 2026-03-10 15:48:16,235 | INFO     | exitmsg: OK
[2026-03-10 11:49:15] 2026-03-10 15:48:16,236 | INFO     | cpuconsumptiontime: 106475 s
[2026-03-10 11:49:15] 2026-03-10 15:48:16,236 | INFO     | nevents: 400
[2026-03-10 11:49:15] 2026-03-10 15:48:16,236 | INFO     | neventsw: 0
[2026-03-10 11:49:15] 2026-03-10 15:48:16,236 | INFO     | pid: 24062
[2026-03-10 11:49:15] 2026-03-10 15:48:16,236 | INFO     | pgrp: 24062
[2026-03-10 11:49:15] 2026-03-10 15:48:16,236 | INFO     | corecount: 8
[2026-03-10 11:49:15] 2026-03-10 15:48:16,237 | INFO     | event service: False
[2026-03-10 11:49:15] 2026-03-10 15:48:16,237 | INFO     | sizes: {0: 2280247, 11: 2280247, 14113: 2310770, 14116: 2319768, 14118: 2320018}
[2026-03-10 11:49:15] 2026-03-10 15:48:16,237 | INFO     | --------------------------------------------------
[2026-03-10 11:49:15] 2026-03-10 15:48:16,237 | INFO     | 
[2026-03-10 11:49:15] 2026-03-10 15:48:16,237 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-10 11:49:15] 2026-03-10 15:48:16,259 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 11:49:15] 2026-03-10 15:48:16,259 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 11:49:15] 2026-03-10 15:48:16,260 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 11:49:15] 2026-03-10 15:48:16,260 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 11:49:15] 2026-03-10 15:48:16,260 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 11:49:15] 2026-03-10 15:48:16,260 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 11:49:15] 2026-03-10 15:48:16,260 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 11:49:15] 2026-03-10 15:48:16,260 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 11:49:15] 2026-03-10 15:48:16,261 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 11:49:15] 2026-03-10 15:48:16,261 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 11:49:15] 2026-03-10 15:48:16,261 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 11:49:15] 2026-03-10 15:48:16,261 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 11:49:15] 2026-03-10 15:48:16,261 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 11:49:15] 2026-03-10 15:48:16,261 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 11:49:15] 2026-03-10 15:48:16,262 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 11:49:15] 2026-03-10 15:48:16,262 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 11:49:15] 2026-03-10 15:48:16,262 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 11:49:15] 2026-03-10 15:48:16,262 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 11:49:15] 2026-03-10 15:48:16,262 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 11:49:15] 2026-03-10 15:48:16,263 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 11:49:15] 2026-03-10 15:48:16,263 | INFO     | job 7048426408 has completed (purged errors)
[2026-03-10 11:49:15] 2026-03-10 15:48:16,263 | INFO     | overall cleanup function is called
[2026-03-10 11:49:15] 2026-03-10 15:48:17,271 | INFO     | --- collectZombieJob: --- 10, [24062]
[2026-03-10 11:49:15] 2026-03-10 15:48:17,271 | INFO     | zombie collector waiting for pid 24062
[2026-03-10 11:49:15] 2026-03-10 15:48:17,272 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 11:49:15] 2026-03-10 15:48:17,272 | INFO     | collected zombie processes
[2026-03-10 11:49:15] 2026-03-10 15:48:17,272 | INFO     | will attempt to kill all subprocesses of pid=24062
[2026-03-10 11:49:15] 2026-03-10 15:48:17,411 | INFO     | process IDs to be killed: [24062] (in reverse order)
[2026-03-10 11:49:15] 2026-03-10 15:48:17,452 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 11:49:15] 2026-03-10 15:48:17,453 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 11:49:15] 2026-03-10 15:48:17,455 | INFO     | did not find any defunct processes belonging to 24062
[2026-03-10 11:49:15] 2026-03-10 15:48:17,458 | INFO     | did not find any defunct processes belonging to 24062
[2026-03-10 11:49:15] 2026-03-10 15:48:17,458 | INFO     | ready for new job
[2026-03-10 11:49:15] 2026-03-10 15:48:17,458 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 11:49:15] 2026-03-10 15:48:17,460 | INFO     | **************************************
[2026-03-10 11:49:15] 2026-03-10 15:48:17,460 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 11:49:15] 2026-03-10 15:48:17,460 | INFO     | **************************************
[2026-03-10 11:49:15] 2026-03-10 15:48:17,460 | INFO     | 
[2026-03-10 11:49:15] 2026-03-10 15:48:17,461 | INFO     | architecture information:
[2026-03-10 11:49:15] 2026-03-10 15:48:17,461 | INFO     | executing command: cat /etc/os-release
[2026-03-10 11:49:15] 2026-03-10 15:48:17,474 | INFO     | cat /etc/os-release:
[2026-03-10 11:49:15] NAME="CentOS Linux"
[2026-03-10 11:49:15] VERSION="7 (Core)"
[2026-03-10 11:49:15] ID="centos"
[2026-03-10 11:49:15] ID_LIKE="rhel fedora"
[2026-03-10 11:49:15] VERSION_ID="7"
[2026-03-10 11:49:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 11:49:15] ANSI_COLOR="0;31"
[2026-03-10 11:49:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 11:49:15] HOME_URL="https://www.centos.org/"
[2026-03-10 11:49:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 11:49:15] 
[2026-03-10 11:49:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 11:49:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 11:49:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 11:49:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 11:49:15] 
[2026-03-10 11:49:15] 2026-03-10 15:48:17,475 | INFO     | **************************************
[2026-03-10 11:49:15] 2026-03-10 15:48:17,977 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-10 11:49:15] 2026-03-10 15:48:18,001 | INFO     | sufficient remaining disk space (27193769984 B)
[2026-03-10 11:49:15] 2026-03-10 15:48:18,001 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 11:49:15] 2026-03-10 15:48:18,001 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 11:49:15] 2026-03-10 15:48:18,001 | INFO     | update_server=False
[2026-03-10 11:49:15] 2026-03-10 15:48:18,001 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 11:49:15] 2026-03-10 15:48:18,002 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 11:49:15] 2026-03-10 15:48:18,242 | INFO     | all payload control threads have been joined
[2026-03-10 11:49:15] 2026-03-10 15:48:18,320 | INFO     | all data control threads have been joined
[2026-03-10 11:49:15] 2026-03-10 15:48:18,639 | INFO     | all job control threads have been joined
[2026-03-10 11:49:15] 2026-03-10 15:48:18,830 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 11:49:15] 2026-03-10 15:48:18,830 | INFO     | aborting loop
[2026-03-10 11:49:15] 2026-03-10 15:48:19,007 | INFO     | [job] retrieve thread has finished
[2026-03-10 11:49:15] 2026-03-10 15:48:19,008 | INFO     | [job] queue monitor thread has finished
[2026-03-10 11:49:15] 2026-03-10 15:48:19,247 | INFO     | [payload] control thread has finished
[2026-03-10 11:49:15] 2026-03-10 15:48:19,326 | INFO     | [data] control thread has finished
[2026-03-10 11:49:15] 2026-03-10 15:48:19,328 | INFO     | [job] validate thread has finished
[2026-03-10 11:49:15] 2026-03-10 15:48:19,340 | INFO     | [payload] failed_post thread has finished
[2026-03-10 11:49:15] 2026-03-10 15:48:19,406 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 11:49:15] 2026-03-10 15:48:19,644 | INFO     | [job] control thread has finished
[2026-03-10 11:49:15] 2026-03-10 15:48:19,675 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 11:49:15] 2026-03-10 15:48:19,836 | INFO     | [job] job monitor thread has finished
[2026-03-10 11:49:15] 2026-03-10 15:48:19,953 | INFO     | [payload] validate_post thread has finished
[2026-03-10 11:49:15] 2026-03-10 15:48:19,959 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 11:49:15] 2026-03-10 15:48:19,988 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 11:49:15] 2026-03-10 15:48:19,993 | INFO     | [data] copytool_in thread has finished
[2026-03-10 11:49:15] 2026-03-10 15:48:20,499 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 11:49:15] 2026-03-10 15:48:21,411 | INFO     | [data] copytool_out thread has finished
[2026-03-10 11:49:15] 2026-03-10 15:48:21,486 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 11:49:15] 2026-03-10 15:48:25,494 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 11:49:15] 2026-03-10 15:48:47,831 | INFO     | PID=19588 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-10 11:49:15] 2026-03-10 15:48:47,831 | INFO     | .. there are 3 such processes running
[2026-03-10 11:49:15] 2026-03-10 15:48:47,832 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 11:49:15] 2026-03-10 15:48:47,832 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 11:49:15] 2026-03-10 15:48:47,832 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 11:49:15] 2026-03-10 15:49:08,998 | INFO     | [monitor] cgroup control has ended
[2026-03-10 11:49:15] 2026-03-10 15:49:09,941 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140071008225088)>', '<ExcThread(monitor, started 140070333957888)>']
[2026-03-10 11:49:15] 2026-03-10 15:49:10,946 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 11:49:15] 2026-03-10 15:49:10,946 | INFO     | [monitor] control thread has ended
[2026-03-10 11:49:15] 2026-03-10 15:49:14,966 | INFO     | all workflow threads have been joined
[2026-03-10 11:49:15] 2026-03-10 15:49:14,966 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 11:49:15] 2026-03-10 15:49:14,966 | INFO     | traces error code: 0
[2026-03-10 11:49:15] 2026-03-10 15:49:14,966 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 11:49:15] 2026-03-10 15:49:15,083 [wrapper] ==== pilot stdout END ====
[2026-03-10 11:49:15] 2026-03-10 15:49:15,086 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 11:49:15] 2026-03-10 15:49:15,088 [wrapper] pilotpid: 19588
[2026-03-10 11:49:15] 2026-03-10 15:49:15,091 [wrapper] Pilot exit status: 0
[2026-03-10 11:49:15] 2026-03-10 15:49:15,101 [wrapper] pandaids: 7048426408
[2026-03-10 11:49:15] 2026-03-10 15:49:15,142 [wrapper] cleanup supervisor_pilot 30294 19589
[2026-03-10 11:49:15] 2026-03-10 15:49:15,145 [wrapper] Test setup, not cleaning
[2026-03-10 11:49:15] 2026-03-10 15:49:15,148 [wrapper] apfmon messages muted
[2026-03-10 11:49:15] 2026-03-10 15:49:15,150 [wrapper] ==== wrapper stdout END ====
[2026-03-10 11:49:15] 2026-03-10 15:49:15,161 [wrapper] ==== wrapper stderr END ====
[2026-03-10 11:49:15]  *** Error codes and diagnostics ***
[2026-03-10 11:49:15]     "exeErrorCode": 0,
[2026-03-10 11:49:15]     "exeErrorDiag": "",
[2026-03-10 11:49:15]     "pilotErrorCode": 0,
[2026-03-10 11:49:15]     "pilotErrorDiag": "",
[2026-03-10 11:49:15]  *** Listing of results directory ***
[2026-03-10 11:49:15] total 554840
[2026-03-10 11:49:15] -rw-r--r-- 1 boincer umatlas    584627 Mar 10 02:40 pilot3.tar.gz
[2026-03-10 11:49:15] -rw-r--r-- 1 boincer umatlas      5111 Mar 10 02:41 queuedata.json
[2026-03-10 11:49:15] -rwx------ 1 boincer umatlas     36322 Mar 10 02:41 runpilot2-wrapper.sh
[2026-03-10 11:49:15] -rw-r--r-- 1 boincer umatlas       100 Mar 10 07:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 11:49:15] -rwxr-xr-x 1 boincer umatlas      7986 Mar 10 07:52 run_atlas
[2026-03-10 11:49:15] -rw-r--r-- 1 boincer umatlas       105 Mar 10 07:52 job.xml
[2026-03-10 11:49:15] -rw-r--r-- 2 boincer umatlas 319753407 Mar 10 07:52 EVNT.48997945._000072.pool.root.1
[2026-03-10 11:49:15] -rw-r--r-- 2 boincer umatlas     15845 Mar 10 07:52 start_atlas.sh
[2026-03-10 11:49:15] drwxrwx--x 2 boincer umatlas      4096 Mar 10 07:52 shared
[2026-03-10 11:49:15] -rw-r--r-- 2 boincer umatlas    597951 Mar 10 07:52 input.tar.gz
[2026-03-10 11:49:15] -rw-r--r-- 1 boincer umatlas         0 Mar 10 07:52 boinc_lockfile
[2026-03-10 11:49:15] -rw-r--r-- 1 boincer umatlas      2571 Mar 10 07:52 pandaJob.out
[2026-03-10 11:49:15] -rw------- 1 boincer umatlas        57 Mar 10 07:52 setup.sh.local
[2026-03-10 11:49:15] -rw------- 1 boincer umatlas   1005415 Mar 10 07:52 agis_schedconf.cvmfs.json
[2026-03-10 11:49:15] -rw------- 1 boincer umatlas       434 Mar 10 07:52 workernode_map.json
[2026-03-10 11:49:15] drwx------ 5 boincer umatlas      4096 Mar 10 07:52 pilot3
[2026-03-10 11:49:15] -rw-r--r-- 1 boincer umatlas      5951 Mar 10 11:46 init_data.xml
[2026-03-10 11:49:15] -rw------- 1 boincer umatlas 239559823 Mar 10 11:47 HITS.48997948._001845.pool.root.1
[2026-03-10 11:49:15] -rw-r--r-- 1 boincer umatlas       531 Mar 10 11:47 boinc_task_state.xml
[2026-03-10 11:49:15] -rw------- 1 boincer umatlas      1067 Mar 10 11:48 memory_monitor_summary.json
[2026-03-10 11:49:15] -rw------- 1 boincer umatlas   1511578 Mar 10 11:48 agis_ddmendpoints.agis.ALL.json
[2026-03-10 11:49:15] -rw------- 1 boincer umatlas    459085 Mar 10 11:48 log.48997948._001845.job.log.tgz.1
[2026-03-10 11:49:15] -rw------- 1 boincer umatlas      6411 Mar 10 11:48 heartbeat.json
[2026-03-10 11:49:15] -rw------- 1 boincer umatlas        95 Mar 10 11:48 pilot_heartbeat.json
[2026-03-10 11:49:15] -rw-r--r-- 1 boincer umatlas      8192 Mar 10 11:49 boinc_mmap_file
[2026-03-10 11:49:15] -rw-r--r-- 1 boincer umatlas        29 Mar 10 11:49 wrapper_checkpoint.txt
[2026-03-10 11:49:15] -rw------- 1 boincer umatlas      4817 Mar 10 11:49 pilotlog.txt
[2026-03-10 11:49:15] -rw------- 1 boincer umatlas   1989212 Mar 10 11:49 log.48997948._001845.job.log.1
[2026-03-10 11:49:15] -rw------- 1 boincer umatlas       357 Mar 10 11:49 output.list
[2026-03-10 11:49:15] -rw-r--r-- 1 boincer umatlas       620 Mar 10 11:49 runtime_log
[2026-03-10 11:49:15] -rw------- 1 boincer umatlas   2467840 Mar 10 11:49 result.tar.gz
[2026-03-10 11:49:15] -rw-r--r-- 1 boincer umatlas      9337 Mar 10 11:49 runtime_log.err
[2026-03-10 11:49:15] -rw------- 1 boincer umatlas       662 Mar 10 11:49 bFMLDmAy5J9n9Rq4apOajLDm4fhM0noT9bVooX4SDmFXcLDmNIvUNm.diag
[2026-03-10 11:49:15] -rw-r--r-- 1 boincer umatlas     21004 Mar 10 11:49 stderr.txt
[2026-03-10 11:49:15] HITS file was successfully produced:
[2026-03-10 11:49:15] -rw------- 1 boincer umatlas 239559823 Mar 10 11:47 shared/HITS.pool.root.1
[2026-03-10 11:49:15]  *** Contents of shared directory: ***
[2026-03-10 11:49:15] total 549228
[2026-03-10 11:49:15] -rw-r--r-- 2 boincer umatlas 319753407 Mar 10 07:52 ATLAS.root_0
[2026-03-10 11:49:15] -rw-r--r-- 2 boincer umatlas     15845 Mar 10 07:52 start_atlas.sh
[2026-03-10 11:49:15] -rw-r--r-- 2 boincer umatlas    597951 Mar 10 07:52 input.tar.gz
[2026-03-10 11:49:15] -rw------- 1 boincer umatlas 239559823 Mar 10 11:47 HITS.pool.root.1
[2026-03-10 11:49:15] -rw------- 1 boincer umatlas   2467840 Mar 10 11:49 result.tar.gz
11:49:17 (15608): run_atlas exited; CPU time 106657.879543
11:49:17 (15608): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN