Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
09:15:25 (350824): wrapper (7.7.26015): starting
09:15:25 (350824): wrapper: running run_atlas (--nthreads 3)
[2026-03-12 09:15:25] Arguments: --nthreads 3
[2026-03-12 09:15:25] Threads: 3
[2026-03-12 09:15:25] Checking for CVMFS
[2026-03-12 09:15:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 09:15:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 09:15:32] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 09:15:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 09:15:33] 2.13.3.0 4272 20225 49364 157189 0 49 2185528 4096001 0 130560 0 1127313 99.922 728778 79 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
[2026-03-12 09:15:33] CVMFS is ok
[2026-03-12 09:15:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 09:15:33] Checking for apptainer binary...
[2026-03-12 09:15:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 09:15:33] Running /usr/bin/apptainer --version
[2026-03-12 09:15:33] apptainer version 1.4.5
[2026-03-12 09:15:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 09:15:33] ahanllin07
[2026-03-12 09:15:33] apptainer works
[2026-03-12 09:15:33] Set ATHENA_PROC_NUMBER=3
[2026-03-12 09:15:33] Set ATHENA_CORE_NUMBER=3
[2026-03-12 09:15:33] Starting ATLAS job with PandaID=7042547106
[2026-03-12 09:15:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 18:38:57]  *** The last 200 lines of the pilot log: ***
[2026-03-12 18:38:57] 2026-03-12 17:38:20,349 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 18:38:57] 2026-03-12 17:38:20,349 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 18:38:57] 2026-03-12 17:38:20,349 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 18:38:57] 2026-03-12 17:38:20,362 | INFO     | fitting pss+swap vs Time
[2026-03-12 18:38:57] 2026-03-12 17:38:20,363 | INFO     | sum of square deviations: 52438758092.0
[2026-03-12 18:38:57] 2026-03-12 17:38:20,372 | INFO     | sum of deviations: 63248195137.99999
[2026-03-12 18:38:57] 2026-03-12 17:38:20,373 | INFO     | mean x: 1773320209.0
[2026-03-12 18:38:57] 2026-03-12 17:38:20,373 | INFO     | mean y: 2295739.499095841
[2026-03-12 18:38:57] 2026-03-12 17:38:20,373 | INFO     | intersect: -2136566939.5944014
[2026-03-12 18:38:57] 2026-03-12 17:38:20,374 | INFO     | chi2: 1.4663661820070282
[2026-03-12 18:38:57] 2026-03-12 17:38:20,375 | INFO     | sum of square deviations: 51029187477.0
[2026-03-12 18:38:57] 2026-03-12 17:38:20,384 | INFO     | sum of deviations: 62375311520.49999
[2026-03-12 18:38:57] 2026-03-12 17:38:20,384 | INFO     | mean x: 1773320056.5
[2026-03-12 18:38:57] 2026-03-12 17:38:20,384 | INFO     | mean y: 2295645.060218978
[2026-03-12 18:38:57] 2026-03-12 17:38:20,384 | INFO     | intersect: -2165314626.9942436
[2026-03-12 18:38:57] 2026-03-12 17:38:20,385 | INFO     | chi2: 1.466497914103619
[2026-03-12 18:38:57] 2026-03-12 17:38:20,385 | INFO     | current chi2=1.466497914103619 (change=-0.00898357437638691 %)
[2026-03-12 18:38:57] 2026-03-12 17:38:20,386 | INFO     | right removable region: 547
[2026-03-12 18:38:57] 2026-03-12 17:38:20,387 | INFO     | sum of square deviations: 51029187477.0
[2026-03-12 18:38:57] 2026-03-12 17:38:20,395 | INFO     | sum of deviations: -3933644139.500001
[2026-03-12 18:38:57] 2026-03-12 17:38:20,396 | INFO     | mean x: 1773320361.5
[2026-03-12 18:38:57] 2026-03-12 17:38:20,396 | INFO     | mean y: 2302970.2755474453
[2026-03-12 18:38:57] 2026-03-12 17:38:20,396 | INFO     | intersect: 139001428.40041104
[2026-03-12 18:38:57] 2026-03-12 17:38:20,397 | INFO     | chi2: 0.1492438854169635
[2026-03-12 18:38:57] 2026-03-12 17:38:20,397 | INFO     | current chi2=0.1492438854169635 (change=89.82219535282162 %)
[2026-03-12 18:38:57] 2026-03-12 17:38:20,398 | INFO     | sum of square deviations: 49645105712.0
[2026-03-12 18:38:57] 2026-03-12 17:38:20,407 | INFO     | sum of deviations: 19425872547.000004
[2026-03-12 18:38:57] 2026-03-12 17:38:20,407 | INFO     | mean x: 1773320514.0
[2026-03-12 18:38:57] 2026-03-12 17:38:20,407 | INFO     | mean y: 2300392.541436464
[2026-03-12 18:38:57] 2026-03-12 17:38:20,407 | INFO     | intersect: -691590733.1978294
[2026-03-12 18:38:57] 2026-03-12 17:38:20,408 | INFO     | chi2: 0.06650889327139153
[2026-03-12 18:38:57] 2026-03-12 17:38:20,408 | INFO     | current chi2=0.06650889327139153 (change=55.436101730013036 %)
[2026-03-12 18:38:57] 2026-03-12 17:38:20,409 | INFO     | sum of square deviations: 48286280234.5
[2026-03-12 18:38:57] 2026-03-12 17:38:20,418 | INFO     | sum of deviations: 29378468762.0
[2026-03-12 18:38:57] 2026-03-12 17:38:20,418 | INFO     | mean x: 1773320666.5
[2026-03-12 18:38:57] 2026-03-12 17:38:20,418 | INFO     | mean y: 2299283.970260223
[2026-03-12 18:38:57] 2026-03-12 17:38:20,418 | INFO     | intersect: -1076629255.4154727
[2026-03-12 18:38:57] 2026-03-12 17:38:20,419 | INFO     | chi2: 0.009839011080800313
[2026-03-12 18:38:57] 2026-03-12 17:38:20,419 | INFO     | current chi2=0.009839011080800313 (change=85.20647300406588 %)
[2026-03-12 18:38:57] 2026-03-12 17:38:20,420 | INFO     | sum of square deviations: 46952478482.0
[2026-03-12 18:38:57] 2026-03-12 17:38:20,429 | INFO     | sum of deviations: 26502918147.999996
[2026-03-12 18:38:57] 2026-03-12 17:38:20,429 | INFO     | mean x: 1773320819.0
[2026-03-12 18:38:57] 2026-03-12 17:38:20,429 | INFO     | mean y: 2299612.7392120077
[2026-03-12 18:38:57] 2026-03-12 17:38:20,429 | INFO     | intersect: -998673669.9410374
[2026-03-12 18:38:57] 2026-03-12 17:38:20,430 | INFO     | chi2: 0.00921060518075737
[2026-03-12 18:38:57] 2026-03-12 17:38:20,431 | INFO     | current chi2=0.00921060518075737 (change=6.386880702565772 %)
[2026-03-12 18:38:57] 2026-03-12 17:38:20,431 | INFO     | left removable region: 40
[2026-03-12 18:38:57] 2026-03-12 17:38:20,432 | INFO     | sum of square deviations: 40411094438.0
[2026-03-12 18:38:57] 2026-03-12 17:38:20,439 | INFO     | sum of deviations: 14711579718.000004
[2026-03-12 18:38:57] 2026-03-12 17:38:20,440 | INFO     | mean x: 1773321246.0
[2026-03-12 18:38:57] 2026-03-12 17:38:20,440 | INFO     | mean y: 2300903.7041420117
[2026-03-12 18:38:57] 2026-03-12 17:38:20,440 | INFO     | intersect: -643273219.9112847
[2026-03-12 18:38:57] 2026-03-12 17:38:20,441 | INFO     | chi2: 0.006124430665721216
[2026-03-12 18:38:57] 2026-03-12 17:38:20,441 | INFO     | current memory leak: 0.36 B/s (using 507 data points, chi2=0.01)
[2026-03-12 18:38:57] 2026-03-12 17:38:20,442 | INFO     | could have reported an average CPU frequency of 2199 MHz (22 samples)
[2026-03-12 18:38:57] 2026-03-12 17:38:20,443 | INFO     | ..............................
[2026-03-12 18:38:57] 2026-03-12 17:38:20,443 | INFO     | . Timing measurements:
[2026-03-12 18:38:57] 2026-03-12 17:38:20,443 | INFO     | . get job = 0 s
[2026-03-12 18:38:57] 2026-03-12 17:38:20,443 | INFO     | . initial setup = 7 s
[2026-03-12 18:38:57] 2026-03-12 17:38:20,443 | INFO     | . payload setup = 7 s
[2026-03-12 18:38:57] 2026-03-12 17:38:20,443 | INFO     | . stage-in = 0 s
[2026-03-12 18:38:57] 2026-03-12 17:38:20,444 | INFO     | . payload execution = 33719 s
[2026-03-12 18:38:57] 2026-03-12 17:38:20,444 | INFO     | . stage-out = 6 s
[2026-03-12 18:38:57] 2026-03-12 17:38:20,444 | INFO     | . log creation = 0 s
[2026-03-12 18:38:57] 2026-03-12 17:38:20,444 | INFO     | ..............................
[2026-03-12 18:38:57] 2026-03-12 17:38:20,620 | INFO     | 
[2026-03-12 18:38:57] 2026-03-12 17:38:20,620 | INFO     | job summary report
[2026-03-12 18:38:57] 2026-03-12 17:38:20,620 | INFO     | --------------------------------------------------
[2026-03-12 18:38:57] 2026-03-12 17:38:20,620 | INFO     | PanDA job id: 7042547106
[2026-03-12 18:38:57] 2026-03-12 17:38:20,620 | INFO     | task id: 48955006
[2026-03-12 18:38:57] 2026-03-12 17:38:20,621 | INFO     | errors: (none)
[2026-03-12 18:38:57] 2026-03-12 17:38:20,621 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 18:38:57] 2026-03-12 17:38:20,621 | INFO     | pilot state: finished 
[2026-03-12 18:38:57] 2026-03-12 17:38:20,621 | INFO     | transexitcode: 0
[2026-03-12 18:38:57] 2026-03-12 17:38:20,621 | INFO     | exeerrorcode: 0
[2026-03-12 18:38:57] 2026-03-12 17:38:20,622 | INFO     | exeerrordiag: 
[2026-03-12 18:38:57] 2026-03-12 17:38:20,622 | INFO     | exitcode: 0
[2026-03-12 18:38:57] 2026-03-12 17:38:20,622 | INFO     | exitmsg: OK
[2026-03-12 18:38:57] 2026-03-12 17:38:20,622 | INFO     | cpuconsumptiontime: 100198 s
[2026-03-12 18:38:57] 2026-03-12 17:38:20,622 | INFO     | nevents: 400
[2026-03-12 18:38:57] 2026-03-12 17:38:20,622 | INFO     | neventsw: 0
[2026-03-12 18:38:57] 2026-03-12 17:38:20,623 | INFO     | pid: 359251
[2026-03-12 18:38:57] 2026-03-12 17:38:20,623 | INFO     | pgrp: 359251
[2026-03-12 18:38:57] 2026-03-12 17:38:20,623 | INFO     | corecount: 3
[2026-03-12 18:38:57] 2026-03-12 17:38:20,623 | INFO     | event service: False
[2026-03-12 18:38:57] 2026-03-12 17:38:20,623 | INFO     | sizes: {0: 2279140, 1: 2279832, 2: 2280293, 33731: 2320249, 33739: 2329261, 33741: 2329317, 33742: 2329639}
[2026-03-12 18:38:57] 2026-03-12 17:38:20,623 | INFO     | --------------------------------------------------
[2026-03-12 18:38:57] 2026-03-12 17:38:20,624 | INFO     | 
[2026-03-12 18:38:57] 2026-03-12 17:38:20,624 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2026-03-12 18:38:57] 2026-03-12 17:38:20,656 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 18:38:57] 2026-03-12 17:38:20,657 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 18:38:57] 2026-03-12 17:38:20,657 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 18:38:57] 2026-03-12 17:38:20,657 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 18:38:57] 2026-03-12 17:38:20,658 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 18:38:57] 2026-03-12 17:38:20,658 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 18:38:57] 2026-03-12 17:38:20,658 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 18:38:57] 2026-03-12 17:38:20,658 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 18:38:57] 2026-03-12 17:38:20,658 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 18:38:57] 2026-03-12 17:38:20,659 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 18:38:57] 2026-03-12 17:38:20,659 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 18:38:57] 2026-03-12 17:38:20,659 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 18:38:57] 2026-03-12 17:38:20,659 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 18:38:57] 2026-03-12 17:38:20,659 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 18:38:57] 2026-03-12 17:38:20,660 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 18:38:57] 2026-03-12 17:38:20,660 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 18:38:57] 2026-03-12 17:38:20,660 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 18:38:57] 2026-03-12 17:38:20,660 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 18:38:57] 2026-03-12 17:38:20,660 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 18:38:57] 2026-03-12 17:38:20,661 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 18:38:57] 2026-03-12 17:38:20,661 | INFO     | job 7042547106 has completed (purged errors)
[2026-03-12 18:38:57] 2026-03-12 17:38:20,661 | INFO     | overall cleanup function is called
[2026-03-12 18:38:57] 2026-03-12 17:38:21,670 | INFO     | --- collectZombieJob: --- 10, [359251]
[2026-03-12 18:38:57] 2026-03-12 17:38:21,671 | INFO     | zombie collector waiting for pid 359251
[2026-03-12 18:38:57] 2026-03-12 17:38:21,671 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 18:38:57] 2026-03-12 17:38:21,671 | INFO     | collected zombie processes
[2026-03-12 18:38:57] 2026-03-12 17:38:21,671 | INFO     | will attempt to kill all subprocesses of pid=359251
[2026-03-12 18:38:57] 2026-03-12 17:38:21,765 | INFO     | process IDs to be killed: [359251] (in reverse order)
[2026-03-12 18:38:57] 2026-03-12 17:38:21,816 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 18:38:57] 2026-03-12 17:38:21,816 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 18:38:57] 2026-03-12 17:38:21,820 | INFO     | did not find any defunct processes belonging to 359251
[2026-03-12 18:38:57] 2026-03-12 17:38:21,824 | INFO     | did not find any defunct processes belonging to 359251
[2026-03-12 18:38:57] 2026-03-12 17:38:21,824 | INFO     | ready for new job
[2026-03-12 18:38:57] 2026-03-12 17:38:21,824 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 18:38:57] 2026-03-12 17:38:21,828 | INFO     | **************************************
[2026-03-12 18:38:57] 2026-03-12 17:38:21,829 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 18:38:57] 2026-03-12 17:38:21,829 | INFO     | **************************************
[2026-03-12 18:38:57] 2026-03-12 17:38:21,829 | INFO     | 
[2026-03-12 18:38:57] 2026-03-12 17:38:21,829 | INFO     | pilot is running in a VM
[2026-03-12 18:38:57] 2026-03-12 17:38:21,830 | INFO     | architecture information:
[2026-03-12 18:38:57] 2026-03-12 17:38:21,830 | INFO     | executing command: cat /etc/os-release
[2026-03-12 18:38:57] 2026-03-12 17:38:21,850 | INFO     | cat /etc/os-release:
[2026-03-12 18:38:57] NAME="CentOS Linux"
[2026-03-12 18:38:57] VERSION="7 (Core)"
[2026-03-12 18:38:57] ID="centos"
[2026-03-12 18:38:57] ID_LIKE="rhel fedora"
[2026-03-12 18:38:57] VERSION_ID="7"
[2026-03-12 18:38:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 18:38:57] ANSI_COLOR="0;31"
[2026-03-12 18:38:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 18:38:57] HOME_URL="https://www.centos.org/"
[2026-03-12 18:38:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 18:38:57] 
[2026-03-12 18:38:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 18:38:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 18:38:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 18:38:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 18:38:57] 
[2026-03-12 18:38:57] 2026-03-12 17:38:21,851 | INFO     | **************************************
[2026-03-12 18:38:57] 2026-03-12 17:38:22,354 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2026-03-12 18:38:57] 2026-03-12 17:38:22,376 | INFO     | sufficient remaining disk space (40854618112 B)
[2026-03-12 18:38:57] 2026-03-12 17:38:22,376 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 18:38:57] 2026-03-12 17:38:22,377 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 18:38:57] 2026-03-12 17:38:22,377 | INFO     | update_server=False
[2026-03-12 18:38:57] 2026-03-12 17:38:22,377 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 18:38:57] 2026-03-12 17:38:22,378 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 18:38:57] 2026-03-12 17:38:22,378 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 18:38:57] 2026-03-12 17:38:22,886 | INFO     | all job control threads have been joined
[2026-03-12 18:38:57] 2026-03-12 17:38:23,004 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 18:38:57] 2026-03-12 17:38:23,005 | INFO     | aborting loop
[2026-03-12 18:38:57] 2026-03-12 17:38:23,166 | INFO     | all data control threads have been joined
[2026-03-12 18:38:57] 2026-03-12 17:38:23,282 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 18:38:57] 2026-03-12 17:38:23,383 | INFO     | [job] retrieve thread has finished
[2026-03-12 18:38:57] 2026-03-12 17:38:23,384 | INFO     | [job] queue monitor thread has finished
[2026-03-12 18:38:57] 2026-03-12 17:38:23,418 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 18:38:57] 2026-03-12 17:38:23,436 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 18:38:57] 2026-03-12 17:38:23,439 | INFO     | [data] copytool_in thread has finished
[2026-03-12 18:38:57] 2026-03-12 17:38:23,445 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 18:38:57] 2026-03-12 17:38:23,462 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 18:38:57] 2026-03-12 17:38:23,483 | INFO     | all payload control threads have been joined
[2026-03-12 18:38:57] 2026-03-12 17:38:23,892 | INFO     | [job] control thread has finished
[2026-03-12 18:38:57] 2026-03-12 17:38:23,946 | INFO     | [job] validate thread has finished
[2026-03-12 18:38:57] 2026-03-12 17:38:24,010 | INFO     | [job] job monitor thread has finished
[2026-03-12 18:38:57] 2026-03-12 17:38:24,172 | INFO     | [data] control thread has finished
[2026-03-12 18:38:57] 2026-03-12 17:38:24,424 | INFO     | [payload] validate_post thread has finished
[2026-03-12 18:38:57] 2026-03-12 17:38:24,488 | INFO     | [payload] control thread has finished
[2026-03-12 18:38:57] 2026-03-12 17:38:24,978 | INFO     | [payload] failed_post thread has finished
[2026-03-12 18:38:57] 2026-03-12 17:38:25,288 | INFO     | [data] copytool_out thread has finished
[2026-03-12 18:38:57] 2026-03-12 17:38:26,385 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 18:38:57] 2026-03-12 17:38:51,857 | INFO     | [monitor] cgroup control has ended
[2026-03-12 18:38:57] 2026-03-12 17:38:52,061 | INFO     | PID=354873 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-12 18:38:57] 2026-03-12 17:38:52,062 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 18:38:57] 2026-03-12 17:38:52,063 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 18:38:57] 2026-03-12 17:38:52,063 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 18:38:57] 2026-03-12 17:38:52,228 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127542370539328)>', '<ExcThread(monitor, started 127541729814272)>']
[2026-03-12 18:38:57] 2026-03-12 17:38:53,068 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 18:38:57] 2026-03-12 17:38:53,069 | INFO     | [monitor] control thread has ended
[2026-03-12 18:38:57] 2026-03-12 17:38:57,240 | INFO     | all workflow threads have been joined
[2026-03-12 18:38:57] 2026-03-12 17:38:57,241 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 18:38:57] 2026-03-12 17:38:57,241 | INFO     | traces error code: 0
[2026-03-12 18:38:57] 2026-03-12 17:38:57,242 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 18:38:57] 2026-03-12 17:38:57,410 [wrapper] ==== pilot stdout END ====
[2026-03-12 18:38:57] 2026-03-12 17:38:57,415 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 18:38:57] 2026-03-12 17:38:57,419 [wrapper] pilotpid: 354873
[2026-03-12 18:38:57] 2026-03-12 17:38:57,424 [wrapper] Pilot exit status: 0
[2026-03-12 18:38:57] 2026-03-12 17:38:57,443 [wrapper] pandaids: 7042547106
[2026-03-12 18:38:57] 2026-03-12 17:38:57,477 [wrapper] cleanup supervisor_pilot  365270 354874
[2026-03-12 18:38:57] 2026-03-12 17:38:57,481 [wrapper] Test setup, not cleaning
[2026-03-12 18:38:57] 2026-03-12 17:38:57,485 [wrapper] apfmon messages muted
[2026-03-12 18:38:57] 2026-03-12 17:38:57,490 [wrapper] ==== wrapper stdout END ====
[2026-03-12 18:38:57] 2026-03-12 17:38:57,494 [wrapper] ==== wrapper stderr END ====
[2026-03-12 18:38:57]  *** Error codes and diagnostics ***
[2026-03-12 18:38:57]     "exeErrorCode": 0,
[2026-03-12 18:38:57]     "exeErrorDiag": "",
[2026-03-12 18:38:57]     "pilotErrorCode": 0,
[2026-03-12 18:38:57]     "pilotErrorDiag": "",
[2026-03-12 18:38:57]  *** Listing of results directory ***
[2026-03-12 18:38:57] total 622748
[2026-03-12 18:38:57] -rw-r--r-- 1 boinc boinc    584627 Mar 10 12:12 pilot3.tar.gz
[2026-03-12 18:38:57] -rwx------ 1 boinc boinc     36322 Mar 10 12:13 runpilot2-wrapper.sh
[2026-03-12 18:38:57] -rw-r--r-- 1 boinc boinc      5111 Mar 10 12:15 queuedata.json
[2026-03-12 18:38:57] -rw-r--r-- 1 boinc boinc       100 Mar 12 09:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 18:38:57] -rwxr-xr-x 1 boinc boinc      7986 Mar 12 09:15 run_atlas
[2026-03-12 18:38:57] -rw-r--r-- 1 boinc boinc       105 Mar 12 09:15 job.xml
[2026-03-12 18:38:57] -rw-r--r-- 2 boinc boinc 444139282 Mar 12 09:15 EVNT.46701403._000851.pool.root.1
[2026-03-12 18:38:57] -rw-r--r-- 2 boinc boinc     15845 Mar 12 09:15 start_atlas.sh
[2026-03-12 18:38:57] drwxrwx--x 2 boinc boinc      4096 Mar 12 09:15 shared
[2026-03-12 18:38:57] -rw-r--r-- 2 boinc boinc    597954 Mar 12 09:15 input.tar.gz
[2026-03-12 18:38:57] -rw-r--r-- 1 boinc boinc      6459 Mar 12 09:15 init_data.xml
[2026-03-12 18:38:57] -rw-r--r-- 1 boinc boinc         0 Mar 12 09:15 boinc_setup_complete
[2026-03-12 18:38:57] -rw-r--r-- 1 boinc boinc         0 Mar 12 09:15 boinc_lockfile
[2026-03-12 18:38:57] -rw-r--r-- 1 boinc boinc      2564 Mar 12 09:15 pandaJob.out
[2026-03-12 18:38:57] -rw------- 1 boinc boinc        51 Mar 12 09:15 setup.sh.local
[2026-03-12 18:38:57] -rw------- 1 boinc boinc   1006243 Mar 12 09:15 agis_schedconf.cvmfs.json
[2026-03-12 18:38:57] -rw------- 1 boinc boinc       414 Mar 12 09:15 workernode_map.json
[2026-03-12 18:38:57] drwx------ 5 boinc boinc      4096 Mar 12 09:15 pilot3
[2026-03-12 18:38:57] -rw------- 1 boinc boinc 178940251 Mar 12 18:37 HITS.48955006._042718.pool.root.1
[2026-03-12 18:38:57] -rw-r--r-- 1 boinc boinc       532 Mar 12 18:37 boinc_task_state.xml
[2026-03-12 18:38:57] -rw------- 1 boinc boinc      1011 Mar 12 18:38 memory_monitor_summary.json
[2026-03-12 18:38:57] -rw------- 1 boinc boinc   1511578 Mar 12 18:38 agis_ddmendpoints.agis.ALL.json
[2026-03-12 18:38:57] -rw------- 1 boinc boinc    645302 Mar 12 18:38 log.48955006._042718.job.log.tgz.1
[2026-03-12 18:38:57] -rw------- 1 boinc boinc      6287 Mar 12 18:38 heartbeat.json
[2026-03-12 18:38:57] -rw-r--r-- 1 boinc boinc      8192 Mar 12 18:38 boinc_mmap_file
[2026-03-12 18:38:57] -rw-r--r-- 1 boinc boinc        29 Mar 12 18:38 wrapper_checkpoint.txt
[2026-03-12 18:38:57] -rw------- 1 boinc boinc        95 Mar 12 18:38 pilot_heartbeat.json
[2026-03-12 18:38:57] -rw------- 1 boinc boinc      4812 Mar 12 18:38 pilotlog.txt
[2026-03-12 18:38:57] -rw------- 1 boinc boinc   4689412 Mar 12 18:38 log.48955006._042718.job.log.1
[2026-03-12 18:38:57] -rw------- 1 boinc boinc       357 Mar 12 18:38 output.list
[2026-03-12 18:38:57] -rw-r--r-- 1 boinc boinc       620 Mar 12 18:38 runtime_log
[2026-03-12 18:38:57] -rw------- 1 boinc boinc   5355520 Mar 12 18:38 result.tar.gz
[2026-03-12 18:38:57] -rw-r--r-- 1 boinc boinc      9419 Mar 12 18:38 runtime_log.err
[2026-03-12 18:38:57] -rw------- 1 boinc boinc       654 Mar 12 18:38 LEqLDm8CAK9n9Rq4apOajLDm4fhM0noT9bVooX4SDm5AdLDmaobhGo.diag
[2026-03-12 18:38:57] -rw-r--r-- 1 boinc boinc     20586 Mar 12 18:38 stderr.txt
[2026-03-12 18:38:57] HITS file was successfully produced:
[2026-03-12 18:38:57] -rw------- 1 boinc boinc 178940251 Mar 12 18:37 shared/HITS.pool.root.1
[2026-03-12 18:38:57]  *** Contents of shared directory: ***
[2026-03-12 18:38:57] total 614320
[2026-03-12 18:38:57] -rw-r--r-- 2 boinc boinc 444139282 Mar 12 09:15 ATLAS.root_0
[2026-03-12 18:38:57] -rw-r--r-- 2 boinc boinc     15845 Mar 12 09:15 start_atlas.sh
[2026-03-12 18:38:57] -rw-r--r-- 2 boinc boinc    597954 Mar 12 09:15 input.tar.gz
[2026-03-12 18:38:57] -rw------- 1 boinc boinc 178940251 Mar 12 18:37 HITS.pool.root.1
[2026-03-12 18:38:57] -rw------- 1 boinc boinc   5355520 Mar 12 18:38 result.tar.gz
18:38:59 (350824): run_atlas exited; CPU time 100726.703371
18:38:59 (350824): called boinc_finish(0)

</stderr_txt>
]]>

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