Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:43:40 (602465): wrapper (7.7.26015): starting
01:43:40 (602465): wrapper: running run_atlas (--nthreads 4)
[2026-03-14 01:43:40] Arguments: --nthreads 4
[2026-03-14 01:43:40] Threads: 4
[2026-03-14 01:43:40] Checking for CVMFS
[2026-03-14 01:43:40] No cvmfs_config command found, will try listing directly
[2026-03-14 01:43:40] CVMFS is ok
[2026-03-14 01:43:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 01:43:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 01:43:40] Further information can be found at the LHC@home message board.
[2026-03-14 01:43:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 01:43:40] Checking for apptainer binary...
[2026-03-14 01:43:40] which: no apptainer in ((null))
[2026-03-14 01:43:40] apptainer is not installed, using version from CVMFS
[2026-03-14 01:43:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 01:43:40] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot12/slots/9/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2026-03-14 01:43:40] apptainer works
[2026-03-14 01:43:40] Set ATHENA_PROC_NUMBER=4
[2026-03-14 01:43:40] Set ATHENA_CORE_NUMBER=4
[2026-03-14 01:43:40] Starting ATLAS job with PandaID=7041595712
[2026-03-14 01:43:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot12/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
02:12:03 (656564): wrapper (7.7.26015): starting
02:12:03 (656564): wrapper: running run_atlas (--nthreads 4)
[2026-03-14 02:12:03] Arguments: --nthreads 4
[2026-03-14 02:12:03] Threads: 4
[2026-03-14 02:12:03] This job has been restarted, cleaning up previous attempt
[2026-03-14 02:12:03] Checking for CVMFS
[2026-03-14 02:12:03] No cvmfs_config command found, will try listing directly
[2026-03-14 02:12:03] CVMFS is ok
[2026-03-14 02:12:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 02:12:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 02:12:04] Further information can be found at the LHC@home message board.
[2026-03-14 02:12:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 02:12:04] Checking for apptainer binary...
[2026-03-14 02:12:04] which: no apptainer in ((null))
[2026-03-14 02:12:04] apptainer is not installed, using version from CVMFS
[2026-03-14 02:12:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 02:12:04] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot12/slots/9/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2026-03-14 02:12:04] apptainer works
[2026-03-14 02:12:04] Set ATHENA_PROC_NUMBER=4
[2026-03-14 02:12:04] Set ATHENA_CORE_NUMBER=4
[2026-03-14 02:12:04] Starting ATLAS job with PandaID=7041595712
[2026-03-14 02:12:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot12/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 05:13:59]  *** The last 200 lines of the pilot log: ***
[2026-03-14 05:13:59] 2026-03-14 04:13:25,915 | INFO     | job 7041595712 has state=finished
[2026-03-14 05:13:59] 2026-03-14 04:13:25,916 | INFO     | preparing for final server update for job 7041595712 in state='finished'
[2026-03-14 05:13:59] 2026-03-14 04:13:25,916 | INFO     | reading metadata from: /var/lib/boinc/var/slot12/slots/9/PanDA_Pilot-7041595712/jobReport.json
[2026-03-14 05:13:59] 2026-03-14 04:13:25,918 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot12/slots/9/workernode_map.json
[2026-03-14 05:13:59] 2026-03-14 04:13:25,919 | INFO     | this job has now completed (state=finished)
[2026-03-14 05:13:59] 2026-03-14 04:13:25,919 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 05:13:59] 2026-03-14 04:13:25,919 | INFO     | log transfer has been attempted: DONE
[2026-03-14 05:13:59] 2026-03-14 04:13:25,919 | INFO     | job 7041595712 has finished - writing final server update
[2026-03-14 05:13:59] 2026-03-14 04:13:25,919 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_654350/.job.ad'
[2026-03-14 05:13:59] 2026-03-14 04:13:25,919 | INFO     | total number of processed events: 400 (read)
[2026-03-14 05:13:59] 2026-03-14 04:13:25,931 | INFO     | using path: /var/lib/boinc/var/slot12/slots/9/PanDA_Pilot-7041595712/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 05:13:59] 2026-03-14 04:13:25,932 | INFO     | extracted standard info from prmon json
[2026-03-14 05:13:59] 2026-03-14 04:13:25,932 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 05:13:59] 2026-03-14 04:13:25,932 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 05:13:59] 2026-03-14 04:13:25,932 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 05:13:59] 2026-03-14 04:13:25,932 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 05:13:59] 2026-03-14 04:13:25,935 | INFO     | fitting pss+swap vs Time
[2026-03-14 05:13:59] 2026-03-14 04:13:25,936 | INFO     | sum of square deviations: 1748737904.5
[2026-03-14 05:13:59] 2026-03-14 04:13:25,937 | INFO     | sum of deviations: 3903560464.499998
[2026-03-14 05:13:59] 2026-03-14 04:13:25,937 | INFO     | mean x: 1773456160.5
[2026-03-14 05:13:59] 2026-03-14 04:13:25,937 | INFO     | mean y: 2341293.949438202
[2026-03-14 05:13:59] 2026-03-14 04:13:25,937 | INFO     | intersect: -3956395653.3297663
[2026-03-14 05:13:59] 2026-03-14 04:13:25,937 | INFO     | chi2: 1.5117073768903035
[2026-03-14 05:13:59] 2026-03-14 04:13:25,938 | INFO     | sum of square deviations: 1605470102.0
[2026-03-14 05:13:59] 2026-03-14 04:13:25,939 | INFO     | sum of deviations: 4051223012.0000095
[2026-03-14 05:13:59] 2026-03-14 04:13:25,939 | INFO     | mean x: 1773456008.0
[2026-03-14 05:13:59] 2026-03-14 04:13:25,939 | INFO     | mean y: 2341451.156069364
[2026-03-14 05:13:59] 2026-03-14 04:13:25,939 | INFO     | intersect: -4472775077.908557
[2026-03-14 05:13:59] 2026-03-14 04:13:25,939 | INFO     | chi2: 1.5126499073631832
[2026-03-14 05:13:59] 2026-03-14 04:13:25,939 | INFO     | current chi2=1.5126499073631832 (change=-0.06234873807512125 %)
[2026-03-14 05:13:59] 2026-03-14 04:13:25,940 | INFO     | right removable region: 172
[2026-03-14 05:13:59] 2026-03-14 04:13:25,940 | INFO     | sum of square deviations: 1605470102.0
[2026-03-14 05:13:59] 2026-03-14 04:13:25,941 | INFO     | sum of deviations: -21371139122.999996
[2026-03-14 05:13:59] 2026-03-14 04:13:25,941 | INFO     | mean x: 1773456313.0
[2026-03-14 05:13:59] 2026-03-14 04:13:25,941 | INFO     | mean y: 2367848.4971098267
[2026-03-14 05:13:59] 2026-03-14 04:13:25,941 | INFO     | intersect: 23609647452.440567
[2026-03-14 05:13:59] 2026-03-14 04:13:25,941 | INFO     | chi2: 0.04594028160113172
[2026-03-14 05:13:59] 2026-03-14 04:13:25,941 | INFO     | current chi2=0.04594028160113172 (change=96.96103344447295 %)
[2026-03-14 05:13:59] 2026-03-14 04:13:25,942 | INFO     | sum of square deviations: 1470248962.0
[2026-03-14 05:13:59] 2026-03-14 04:13:25,943 | INFO     | sum of deviations: -20680278712.500004
[2026-03-14 05:13:59] 2026-03-14 04:13:25,943 | INFO     | mean x: 1773456465.5
[2026-03-14 05:13:59] 2026-03-14 04:13:25,943 | INFO     | mean y: 2367044.636904762
[2026-03-14 05:13:59] 2026-03-14 04:13:25,943 | INFO     | intersect: 24947512349.235428
[2026-03-14 05:13:59] 2026-03-14 04:13:25,943 | INFO     | chi2: 0.04101627036830807
[2026-03-14 05:13:59] 2026-03-14 04:13:25,943 | INFO     | current chi2=0.04101627036830807 (change=10.718287004802225 %)
[2026-03-14 05:13:59] 2026-03-14 04:13:25,943 | INFO     | left removable region: 20
[2026-03-14 05:13:59] 2026-03-14 04:13:25,944 | INFO     | sum of square deviations: 1088905998.0
[2026-03-14 05:13:59] 2026-03-14 04:13:25,944 | INFO     | sum of deviations: -15721878127.0
[2026-03-14 05:13:59] 2026-03-14 04:13:25,944 | INFO     | mean x: 1773456587.5
[2026-03-14 05:13:59] 2026-03-14 04:13:25,945 | INFO     | mean y: 2362864.302631579
[2026-03-14 05:13:59] 2026-03-14 04:13:25,945 | INFO     | intersect: 25607941659.36067
[2026-03-14 05:13:59] 2026-03-14 04:13:25,945 | INFO     | chi2: 0.03882339986499842
[2026-03-14 05:13:59] 2026-03-14 04:13:25,945 | INFO     | current memory leak: -14.44 B/s (using 152 data points, chi2=0.04)
[2026-03-14 05:13:59] 2026-03-14 04:13:25,945 | INFO     | could have reported an average CPU frequency of 2582 MHz (10 samples)
[2026-03-14 05:13:59] 2026-03-14 04:13:25,946 | INFO     | ..............................
[2026-03-14 05:13:59] 2026-03-14 04:13:25,946 | INFO     | . Timing measurements:
[2026-03-14 05:13:59] 2026-03-14 04:13:25,946 | INFO     | . get job = 0 s
[2026-03-14 05:13:59] 2026-03-14 04:13:25,946 | INFO     | . initial setup = 1 s
[2026-03-14 05:13:59] 2026-03-14 04:13:25,946 | INFO     | . payload setup = 7 s
[2026-03-14 05:13:59] 2026-03-14 04:13:25,946 | INFO     | . stage-in = 0 s
[2026-03-14 05:13:59] 2026-03-14 04:13:25,946 | INFO     | . payload execution = 10838 s
[2026-03-14 05:13:59] 2026-03-14 04:13:25,946 | INFO     | . stage-out = 1 s
[2026-03-14 05:13:59] 2026-03-14 04:13:25,946 | INFO     | . log creation = 0 s
[2026-03-14 05:13:59] 2026-03-14 04:13:25,946 | INFO     | ..............................
[2026-03-14 05:13:59] 2026-03-14 04:13:26,347 | INFO     | 
[2026-03-14 05:13:59] 2026-03-14 04:13:26,347 | INFO     | job summary report
[2026-03-14 05:13:59] 2026-03-14 04:13:26,347 | INFO     | --------------------------------------------------
[2026-03-14 05:13:59] 2026-03-14 04:13:26,347 | INFO     | PanDA job id: 7041595712
[2026-03-14 05:13:59] 2026-03-14 04:13:26,347 | INFO     | task id: 48955010
[2026-03-14 05:13:59] 2026-03-14 04:13:26,347 | INFO     | errors: (none)
[2026-03-14 05:13:59] 2026-03-14 04:13:26,347 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 05:13:59] 2026-03-14 04:13:26,347 | INFO     | pilot state: finished 
[2026-03-14 05:13:59] 2026-03-14 04:13:26,347 | INFO     | transexitcode: 0
[2026-03-14 05:13:59] 2026-03-14 04:13:26,347 | INFO     | exeerrorcode: 0
[2026-03-14 05:13:59] 2026-03-14 04:13:26,347 | INFO     | exeerrordiag: 
[2026-03-14 05:13:59] 2026-03-14 04:13:26,348 | INFO     | exitcode: 0
[2026-03-14 05:13:59] 2026-03-14 04:13:26,348 | INFO     | exitmsg: OK
[2026-03-14 05:13:59] 2026-03-14 04:13:26,348 | INFO     | cpuconsumptiontime: 40614 s
[2026-03-14 05:13:59] 2026-03-14 04:13:26,348 | INFO     | nevents: 400
[2026-03-14 05:13:59] 2026-03-14 04:13:26,348 | INFO     | neventsw: 0
[2026-03-14 05:13:59] 2026-03-14 04:13:26,348 | INFO     | pid: 663661
[2026-03-14 05:13:59] 2026-03-14 04:13:26,348 | INFO     | pgrp: 663661
[2026-03-14 05:13:59] 2026-03-14 04:13:26,348 | INFO     | corecount: 4
[2026-03-14 05:13:59] 2026-03-14 04:13:26,348 | INFO     | event service: False
[2026-03-14 05:13:59] 2026-03-14 04:13:26,348 | INFO     | sizes: {0: 2279757, 1: 2280218, 12: 2280218, 10849: 2309392, 10851: 2318412, 10854: 2318468, 10857: 2318818}
[2026-03-14 05:13:59] 2026-03-14 04:13:26,348 | INFO     | --------------------------------------------------
[2026-03-14 05:13:59] 2026-03-14 04:13:26,348 | INFO     | 
[2026-03-14 05:13:59] 2026-03-14 04:13:26,348 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot12/slots/9
[2026-03-14 05:13:59] 2026-03-14 04:13:26,373 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 05:13:59] 2026-03-14 04:13:26,373 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 05:13:59] 2026-03-14 04:13:26,373 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 05:13:59] 2026-03-14 04:13:26,373 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 05:13:59] 2026-03-14 04:13:26,373 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 05:13:59] 2026-03-14 04:13:26,373 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 05:13:59] 2026-03-14 04:13:26,373 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 05:13:59] 2026-03-14 04:13:26,373 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 05:13:59] 2026-03-14 04:13:26,374 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 05:13:59] 2026-03-14 04:13:26,374 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 05:13:59] 2026-03-14 04:13:26,374 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 05:13:59] 2026-03-14 04:13:26,374 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 05:13:59] 2026-03-14 04:13:26,374 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 05:13:59] 2026-03-14 04:13:26,374 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 05:13:59] 2026-03-14 04:13:26,374 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 05:13:59] 2026-03-14 04:13:26,374 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 05:13:59] 2026-03-14 04:13:26,374 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 05:13:59] 2026-03-14 04:13:26,374 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 05:13:59] 2026-03-14 04:13:26,374 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 05:13:59] 2026-03-14 04:13:26,374 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 05:13:59] 2026-03-14 04:13:26,375 | INFO     | job 7041595712 has completed (purged errors)
[2026-03-14 05:13:59] 2026-03-14 04:13:26,375 | INFO     | overall cleanup function is called
[2026-03-14 05:13:59] 2026-03-14 04:13:27,382 | INFO     | --- collectZombieJob: --- 10, [663661]
[2026-03-14 05:13:59] 2026-03-14 04:13:27,383 | INFO     | zombie collector waiting for pid 663661
[2026-03-14 05:13:59] 2026-03-14 04:13:27,383 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 05:13:59] 2026-03-14 04:13:27,383 | INFO     | collected zombie processes
[2026-03-14 05:13:59] 2026-03-14 04:13:27,383 | INFO     | will attempt to kill all subprocesses of pid=663661
[2026-03-14 05:13:59] 2026-03-14 04:13:27,759 | INFO     | process IDs to be killed: [663661] (in reverse order)
[2026-03-14 05:13:59] 2026-03-14 04:13:27,884 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 05:13:59] 2026-03-14 04:13:27,885 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 05:13:59] 2026-03-14 04:13:27,897 | INFO     | did not find any defunct processes belonging to 663661
[2026-03-14 05:13:59] 2026-03-14 04:13:27,909 | INFO     | did not find any defunct processes belonging to 663661
[2026-03-14 05:13:59] 2026-03-14 04:13:27,909 | INFO     | ready for new job
[2026-03-14 05:13:59] 2026-03-14 04:13:27,909 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 05:13:59] 2026-03-14 04:13:27,911 | INFO     | **************************************
[2026-03-14 05:13:59] 2026-03-14 04:13:27,911 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-14 05:13:59] 2026-03-14 04:13:27,911 | INFO     | **************************************
[2026-03-14 05:13:59] 2026-03-14 04:13:27,912 | INFO     | 
[2026-03-14 05:13:59] 2026-03-14 04:13:27,915 | INFO     | architecture information:
[2026-03-14 05:13:59] 2026-03-14 04:13:27,915 | INFO     | executing command: cat /etc/os-release
[2026-03-14 05:13:59] 2026-03-14 04:13:27,932 | INFO     | cat /etc/os-release:
[2026-03-14 05:13:59] NAME="CentOS Linux"
[2026-03-14 05:13:59] VERSION="7 (Core)"
[2026-03-14 05:13:59] ID="centos"
[2026-03-14 05:13:59] ID_LIKE="rhel fedora"
[2026-03-14 05:13:59] VERSION_ID="7"
[2026-03-14 05:13:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 05:13:59] ANSI_COLOR="0;31"
[2026-03-14 05:13:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 05:13:59] HOME_URL="https://www.centos.org/"
[2026-03-14 05:13:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 05:13:59] 
[2026-03-14 05:13:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 05:13:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 05:13:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 05:13:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 05:13:59] 
[2026-03-14 05:13:59] 2026-03-14 04:13:27,932 | INFO     | **************************************
[2026-03-14 05:13:59] 2026-03-14 04:13:28,435 | INFO     | executing command: df -mP /var/lib/boinc/var/slot12/slots/9
[2026-03-14 05:13:59] 2026-03-14 04:13:28,450 | INFO     | sufficient remaining disk space (20570963968 B)
[2026-03-14 05:13:59] 2026-03-14 04:13:28,451 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 05:13:59] 2026-03-14 04:13:28,451 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 05:13:59] 2026-03-14 04:13:28,451 | INFO     | update_server=False
[2026-03-14 05:13:59] 2026-03-14 04:13:28,451 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 05:13:59] 2026-03-14 04:13:28,451 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 05:13:59] 2026-03-14 04:13:28,462 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 05:13:59] 2026-03-14 04:13:28,463 | INFO     | aborting loop
[2026-03-14 05:13:59] 2026-03-14 04:13:28,595 | INFO     | all job control threads have been joined
[2026-03-14 05:13:59] 2026-03-14 04:13:28,671 | INFO     | all data control threads have been joined
[2026-03-14 05:13:59] 2026-03-14 04:13:29,371 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 05:13:59] 2026-03-14 04:13:29,448 | INFO     | all payload control threads have been joined
[2026-03-14 05:13:59] 2026-03-14 04:13:29,459 | INFO     | [job] retrieve thread has finished
[2026-03-14 05:13:59] 2026-03-14 04:13:29,468 | INFO     | [job] job monitor thread has finished
[2026-03-14 05:13:59] 2026-03-14 04:13:29,505 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 05:13:59] 2026-03-14 04:13:29,544 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 05:13:59] 2026-03-14 04:13:29,604 | INFO     | [job] control thread has finished
[2026-03-14 05:13:59] 2026-03-14 04:13:29,677 | INFO     | [data] control thread has finished
[2026-03-14 05:13:59] 2026-03-14 04:13:29,759 | INFO     | [payload] failed_post thread has finished
[2026-03-14 05:13:59] 2026-03-14 04:13:30,454 | INFO     | [payload] control thread has finished
[2026-03-14 05:13:59] 2026-03-14 04:13:30,458 | INFO     | [data] copytool_out thread has finished
[2026-03-14 05:13:59] 2026-03-14 04:13:30,467 | INFO     | [data] copytool_in thread has finished
[2026-03-14 05:13:59] 2026-03-14 04:13:30,599 | INFO     | [payload] validate_post thread has finished
[2026-03-14 05:13:59] 2026-03-14 04:13:30,604 | INFO     | [job] validate thread has finished
[2026-03-14 05:13:59] 2026-03-14 04:13:30,641 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 05:13:59] 2026-03-14 04:13:31,054 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 05:13:59] 2026-03-14 04:13:32,059 | INFO     | [job] queue monitor thread has finished
[2026-03-14 05:13:59] 2026-03-14 04:13:33,376 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 05:13:59] 2026-03-14 04:13:35,018 | INFO     | [monitor] cgroup control has ended
[2026-03-14 05:13:59] 2026-03-14 04:13:39,205 | INFO     | job.realtimelogging is not enabled
[2026-03-14 05:13:59] 2026-03-14 04:13:40,211 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 05:13:59] 2026-03-14 04:13:41,367 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22508149684032)>', '<ExcThread(monitor, started 22507836917504)>']
[2026-03-14 05:13:59] 2026-03-14 04:13:46,392 | INFO     | all workflow threads have been joined
[2026-03-14 05:13:59] 2026-03-14 04:13:46,393 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 05:13:59] 2026-03-14 04:13:46,393 | INFO     | traces error code: 0
[2026-03-14 05:13:59] 2026-03-14 04:13:46,393 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 05:13:59] 2026-03-14 04:13:59,369 | INFO     | PID=660672 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-14 05:13:59] 2026-03-14 04:13:59,369 | INFO     | .. there are 13 such processes running
[2026-03-14 05:13:59] 2026-03-14 04:13:59,370 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 05:13:59] 2026-03-14 04:13:59,370 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 05:13:59] 2026-03-14 04:13:59,370 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 05:13:59] 2026-03-14 04:13:59,370 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 05:13:59] 2026-03-14 04:13:59,371 | INFO     | [monitor] control thread has ended
[2026-03-14 05:13:59] 2026-03-14 04:13:59,509 [wrapper] ==== pilot stdout END ====
[2026-03-14 05:13:59] 2026-03-14 04:13:59,512 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 05:13:59] 2026-03-14 04:13:59,514 [wrapper] pilotpid: 660672
[2026-03-14 05:13:59] 2026-03-14 04:13:59,518 [wrapper] Pilot exit status: 0
[2026-03-14 05:13:59] 2026-03-14 04:13:59,529 [wrapper] pandaids: 7041595712 7041595712
[2026-03-14 05:13:59] 2026-03-14 04:13:59,604 [wrapper] cleanup supervisor_pilot  878723 660673
[2026-03-14 05:13:59] 2026-03-14 04:13:59,607 [wrapper] Test setup, not cleaning
[2026-03-14 05:13:59] 2026-03-14 04:13:59,610 [wrapper] apfmon messages muted
[2026-03-14 05:13:59] 2026-03-14 04:13:59,613 [wrapper] ==== wrapper stdout END ====
[2026-03-14 05:13:59] 2026-03-14 04:13:59,615 [wrapper] ==== wrapper stderr END ====
[2026-03-14 05:13:59]  *** Error codes and diagnostics ***
[2026-03-14 05:13:59]     "exeErrorCode": 0,
[2026-03-14 05:13:59]     "exeErrorDiag": "",
[2026-03-14 05:13:59]     "pilotErrorCode": 0,
[2026-03-14 05:13:59]     "pilotErrorDiag": "",
[2026-03-14 05:13:59]  *** Listing of results directory ***
[2026-03-14 05:13:59] total 1044908
[2026-03-14 05:13:59] drwx------. 5 boinc boinc      4096 Feb  2 16:00 pilot3
[2026-03-14 05:13:59] -rw-r--r--. 1 boinc boinc      5111 Mar 10 04:18 queuedata.json
[2026-03-14 05:13:59] -rw-r--r--. 1 boinc boinc    584627 Mar 10 04:18 pilot3.tar.gz
[2026-03-14 05:13:59] -rwx------. 1 boinc boinc     36322 Mar 10 04:18 runpilot2-wrapper.sh
[2026-03-14 05:13:59] -rw-r--r--. 1 boinc boinc       100 Mar 14 00:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 05:13:59] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 00:43 run_atlas
[2026-03-14 05:13:59] -rw-r--r--. 1 boinc boinc       105 Mar 14 00:43 job.xml
[2026-03-14 05:13:59] -rw-r--r--. 3 boinc boinc 439497022 Mar 14 01:43 EVNT.46701403._001432.pool.root.1
[2026-03-14 05:13:59] -rw-r--r--. 3 boinc boinc 439497022 Mar 14 01:43 ATLAS.root_0
[2026-03-14 05:13:59] -rw-r--r--. 2 boinc boinc     15845 Mar 14 01:43 start_atlas.sh
[2026-03-14 05:13:59] drwxrwx--x. 2 boinc boinc      4096 Mar 14 01:43 shared
[2026-03-14 05:13:59] -rw-r--r--. 2 boinc boinc    597957 Mar 14 01:43 input.tar.gz
[2026-03-14 05:13:59] -rw-r--r--. 1 boinc boinc         0 Mar 14 01:43 boinc_lockfile
[2026-03-14 05:13:59] -rw-r--r--. 1 boinc boinc      6564 Mar 14 02:12 init_data.xml
[2026-03-14 05:13:59] -rw-r--r--. 1 boinc boinc      2563 Mar 14 02:12 pandaJob.out
[2026-03-14 05:13:59] -rw-------. 1 boinc boinc   1006713 Mar 14 02:12 agis_schedconf.cvmfs.json
[2026-03-14 05:13:59] -rw-------. 1 boinc boinc       452 Mar 14 02:12 workernode_map.json
[2026-03-14 05:13:59] -rw-------. 1 boinc boinc 183200716 Mar 14 05:12 HITS.48955010._021732.pool.root.1
[2026-03-14 05:13:59] -rw-r--r--. 1 boinc boinc       531 Mar 14 05:12 boinc_task_state.xml
[2026-03-14 05:13:59] -rw-------. 1 boinc boinc      1033 Mar 14 05:13 memory_monitor_summary.json
[2026-03-14 05:13:59] -rw-------. 1 boinc boinc   1511579 Mar 14 05:13 agis_ddmendpoints.agis.ALL.json
[2026-03-14 05:13:59] -rw-------. 1 boinc boinc    388781 Mar 14 05:13 log.48955010._021732.job.log.tgz.1
[2026-03-14 05:13:59] -rw-------. 1 boinc boinc      6414 Mar 14 05:13 heartbeat.json
[2026-03-14 05:13:59] -rw-r--r--. 1 boinc boinc      8192 Mar 14 05:13 boinc_mmap_file
[2026-03-14 05:13:59] -rw-r--r--. 1 boinc boinc        28 Mar 14 05:13 wrapper_checkpoint.txt
[2026-03-14 05:13:59] -rw-------. 1 boinc boinc        97 Mar 14 05:13 pilot_heartbeat.json
[2026-03-14 05:13:59] -rw-------. 1 boinc boinc       822 Mar 14 05:13 pilotlog.txt
[2026-03-14 05:13:59] -rw-------. 1 boinc boinc   1534769 Mar 14 05:13 log.48955010._021732.job.log.1
[2026-03-14 05:13:59] -rw-------. 1 boinc boinc       357 Mar 14 05:13 output.list
[2026-03-14 05:13:59] -rw-r--r--. 1 boinc boinc       620 Mar 14 05:13 runtime_log
[2026-03-14 05:13:59] -rw-------. 1 boinc boinc   1945600 Mar 14 05:13 result.tar.gz
[2026-03-14 05:13:59] -rw-------. 1 boinc boinc       789 Mar 14 05:13 N5iMDmLn2J9n9Rq4apOajLDm4fhM0noT9bVooX4SDmezbLDmYdD0Pn.diag
[2026-03-14 05:13:59] -rw-r--r--. 1 boinc boinc      9282 Mar 14 05:13 runtime_log.err
[2026-03-14 05:13:59] -rw-r--r--. 1 boinc boinc     23019 Mar 14 05:13 stderr.txt
[2026-03-14 05:13:59] HITS file was successfully produced:
[2026-03-14 05:13:59] -rw-------. 1 boinc boinc 183200716 Mar 14 05:12 shared/HITS.pool.root.1
[2026-03-14 05:13:59]  *** Contents of shared directory: ***
[2026-03-14 05:13:59] total 610616
[2026-03-14 05:13:59] -rw-r--r--. 3 boinc boinc 439497022 Mar 14 01:43 ATLAS.root_0
[2026-03-14 05:13:59] -rw-r--r--. 2 boinc boinc     15845 Mar 14 01:43 start_atlas.sh
[2026-03-14 05:13:59] -rw-r--r--. 2 boinc boinc    597957 Mar 14 01:43 input.tar.gz
[2026-03-14 05:13:59] -rw-------. 1 boinc boinc 183200716 Mar 14 05:12 HITS.pool.root.1
[2026-03-14 05:13:59] -rw-------. 1 boinc boinc   1945600 Mar 14 05:13 result.tar.gz
05:14:01 (656564): run_atlas exited; CPU time 41029.334259
05:14:01 (656564): called boinc_finish(0)

</stderr_txt>
]]>

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