Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
12:14:51 (165262): wrapper (7.7.26015): starting
12:14:51 (165262): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 12:14:51] Arguments: --nthreads 4
[2026-03-10 12:14:51] Threads: 4
[2026-03-10 12:14:51] Checking for CVMFS
[2026-03-10 12:14:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-10 12:14:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-10 12:14:51] Running cvmfs_config stat atlas.cern.ch
[2026-03-10 12:14:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-10 12:14:52] 2.13.2.0 3475 251 57192 157110 3 79 2893599 4096000 257 130560 0 487775 99.992 9841 488 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-10 12:14:52] CVMFS is ok
[2026-03-10 12:14:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 12:14:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 12:14:52] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-10 12:14:52] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-10 12:14:52] Further information can be found at the LHC@home message board.
[2026-03-10 12:14:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 12:14:52] Checking for apptainer binary...
[2026-03-10 12:14:52] apptainer is not installed, using version from CVMFS
[2026-03-10 12:14:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 12:14:52] ng-jupiter
[2026-03-10 12:14:52] apptainer works
[2026-03-10 12:14:52] Set ATHENA_PROC_NUMBER=4
[2026-03-10 12:14:52] Set ATHENA_CORE_NUMBER=4
[2026-03-10 12:14:52] Starting ATLAS job with PandaID=7035669127
[2026-03-10 12:14:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 16:12:33]  *** The last 200 lines of the pilot log: ***
[2026-03-10 16:12:33] 2026-03-10 14:11:53,673 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-10 16:12:33] 2026-03-10 14:11:53,763 | INFO     | job 7035669127 has state=finished
[2026-03-10 16:12:33] 2026-03-10 14:11:53,763 | INFO     | preparing for final server update for job 7035669127 in state='finished'
[2026-03-10 16:12:33] 2026-03-10 14:11:53,763 | INFO     | reading metadata from: /var/lib/boinc-client/slots/2/PanDA_Pilot-7035669127/jobReport.json
[2026-03-10 16:12:33] 2026-03-10 14:11:53,766 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/2/workernode_map.json
[2026-03-10 16:12:33] 2026-03-10 14:11:53,766 | INFO     | this job has now completed (state=finished)
[2026-03-10 16:12:33] 2026-03-10 14:11:53,766 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 16:12:33] 2026-03-10 14:11:53,767 | INFO     | log transfer has been attempted: DONE
[2026-03-10 16:12:33] 2026-03-10 14:11:53,767 | INFO     | job 7035669127 has finished - writing final server update
[2026-03-10 16:12:33] 2026-03-10 14:11:53,767 | INFO     | total number of processed events: 400 (read)
[2026-03-10 16:12:33] 2026-03-10 14:11:53,780 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-7035669127/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 16:12:33] 2026-03-10 14:11:53,781 | INFO     | extracted standard info from prmon json
[2026-03-10 16:12:33] 2026-03-10 14:11:53,781 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 16:12:33] 2026-03-10 14:11:53,781 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 16:12:33] 2026-03-10 14:11:53,781 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 16:12:33] 2026-03-10 14:11:53,781 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 16:12:33] 2026-03-10 14:11:53,786 | INFO     | fitting pss+swap vs Time
[2026-03-10 16:12:33] 2026-03-10 14:11:53,786 | INFO     | sum of square deviations: 3922276332.0
[2026-03-10 16:12:33] 2026-03-10 14:11:53,788 | INFO     | sum of deviations: -79776735007.99995
[2026-03-10 16:12:33] 2026-03-10 14:11:53,788 | INFO     | mean x: 1773144808.0
[2026-03-10 16:12:33] 2026-03-10 14:11:53,788 | INFO     | mean y: 1719938.5622317595
[2026-03-10 16:12:33] 2026-03-10 14:11:53,788 | INFO     | intersect: 36066415922.51336
[2026-03-10 16:12:33] 2026-03-10 14:11:53,789 | INFO     | chi2: 2.7792858843860517
[2026-03-10 16:12:33] 2026-03-10 14:11:53,789 | INFO     | sum of square deviations: 3675146117.0
[2026-03-10 16:12:33] 2026-03-10 14:11:53,791 | INFO     | sum of deviations: -79589540129.50002
[2026-03-10 16:12:33] 2026-03-10 14:11:53,791 | INFO     | mean x: 1773144655.5
[2026-03-10 16:12:33] 2026-03-10 14:11:53,791 | INFO     | mean y: 1720078.5131578948
[2026-03-10 16:12:33] 2026-03-10 14:11:53,791 | INFO     | intersect: 38401218553.2906
[2026-03-10 16:12:33] 2026-03-10 14:11:53,792 | INFO     | chi2: 2.6847179421104257
[2026-03-10 16:12:33] 2026-03-10 14:11:53,792 | INFO     | current chi2=2.6847179421104257 (change=3.402598588612493 %)
[2026-03-10 16:12:33] 2026-03-10 14:11:53,792 | INFO     | right removable region: 227
[2026-03-10 16:12:33] 2026-03-10 14:11:53,792 | INFO     | sum of square deviations: 3675146117.0
[2026-03-10 16:12:33] 2026-03-10 14:11:53,794 | INFO     | sum of deviations: -104195207577.00002
[2026-03-10 16:12:33] 2026-03-10 14:11:53,794 | INFO     | mean x: 1773144960.5
[2026-03-10 16:12:33] 2026-03-10 14:11:53,794 | INFO     | mean y: 1734849.99122807
[2026-03-10 16:12:33] 2026-03-10 14:11:53,794 | INFO     | intersect: 50272717646.78461
[2026-03-10 16:12:33] 2026-03-10 14:11:53,795 | INFO     | chi2: 1.1720863343294519
[2026-03-10 16:12:33] 2026-03-10 14:11:53,795 | INFO     | current chi2=1.1720863343294519 (change=57.82778803309875 %)
[2026-03-10 16:12:33] 2026-03-10 14:11:53,795 | INFO     | sum of square deviations: 3438620752.0
[2026-03-10 16:12:33] 2026-03-10 14:11:53,797 | INFO     | sum of deviations: -99087903704.00002
[2026-03-10 16:12:33] 2026-03-10 14:11:53,797 | INFO     | mean x: 1773145113.0
[2026-03-10 16:12:33] 2026-03-10 14:11:53,797 | INFO     | mean y: 1731534.6143497757
[2026-03-10 16:12:33] 2026-03-10 14:11:53,797 | INFO     | intersect: 51096994688.59017
[2026-03-10 16:12:33] 2026-03-10 14:11:53,798 | INFO     | chi2: 1.1603955296066486
[2026-03-10 16:12:33] 2026-03-10 14:11:53,798 | INFO     | current chi2=1.1603955296066486 (change=0.9974354602036671 %)
[2026-03-10 16:12:33] 2026-03-10 14:11:53,798 | INFO     | left removable region: 20
[2026-03-10 16:12:33] 2026-03-10 14:11:53,799 | INFO     | sum of square deviations: 2750295288.0
[2026-03-10 16:12:33] 2026-03-10 14:11:53,800 | INFO     | sum of deviations: -80441806540.00005
[2026-03-10 16:12:33] 2026-03-10 14:11:53,800 | INFO     | mean x: 1773145235.0
[2026-03-10 16:12:33] 2026-03-10 14:11:53,800 | INFO     | mean y: 1718823.579710145
[2026-03-10 16:12:33] 2026-03-10 14:11:53,800 | INFO     | intersect: 51863424940.56773
[2026-03-10 16:12:33] 2026-03-10 14:11:53,801 | INFO     | chi2: 1.0177257592234528
[2026-03-10 16:12:33] 2026-03-10 14:11:53,801 | INFO     | current memory leak: -29.25 B/s (using 207 data points, chi2=1.02)
[2026-03-10 16:12:33] 2026-03-10 14:11:53,801 | INFO     | could have reported an average CPU frequency of 1788 MHz (11 samples)
[2026-03-10 16:12:33] 2026-03-10 14:11:53,802 | INFO     | ..............................
[2026-03-10 16:12:33] 2026-03-10 14:11:53,802 | INFO     | . Timing measurements:
[2026-03-10 16:12:33] 2026-03-10 14:11:53,802 | INFO     | . get job = 0 s
[2026-03-10 16:12:33] 2026-03-10 14:11:53,802 | INFO     | . initial setup = 6 s
[2026-03-10 16:12:33] 2026-03-10 14:11:53,802 | INFO     | . payload setup = 6 s
[2026-03-10 16:12:33] 2026-03-10 14:11:53,802 | INFO     | . stage-in = 0 s
[2026-03-10 16:12:33] 2026-03-10 14:11:53,802 | INFO     | . payload execution = 14181 s
[2026-03-10 16:12:33] 2026-03-10 14:11:53,802 | INFO     | . stage-out = 1 s
[2026-03-10 16:12:33] 2026-03-10 14:11:53,802 | INFO     | . log creation = 0 s
[2026-03-10 16:12:33] 2026-03-10 14:11:53,803 | INFO     | ..............................
[2026-03-10 16:12:33] 2026-03-10 14:11:53,911 | INFO     | time since job start (14205s) is within the limit (349056.0s)
[2026-03-10 16:12:33] 2026-03-10 14:11:54,142 | INFO     | 
[2026-03-10 16:12:33] 2026-03-10 14:11:54,142 | INFO     | job summary report
[2026-03-10 16:12:33] 2026-03-10 14:11:54,142 | INFO     | --------------------------------------------------
[2026-03-10 16:12:33] 2026-03-10 14:11:54,143 | INFO     | PanDA job id: 7035669127
[2026-03-10 16:12:33] 2026-03-10 14:11:54,143 | INFO     | task id: 48844649
[2026-03-10 16:12:33] 2026-03-10 14:11:54,143 | INFO     | errors: (none)
[2026-03-10 16:12:33] 2026-03-10 14:11:54,143 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 16:12:33] 2026-03-10 14:11:54,143 | INFO     | pilot state: finished 
[2026-03-10 16:12:33] 2026-03-10 14:11:54,143 | INFO     | transexitcode: 0
[2026-03-10 16:12:33] 2026-03-10 14:11:54,143 | INFO     | exeerrorcode: 0
[2026-03-10 16:12:33] 2026-03-10 14:11:54,143 | INFO     | exeerrordiag: 
[2026-03-10 16:12:33] 2026-03-10 14:11:54,143 | INFO     | exitcode: 0
[2026-03-10 16:12:33] 2026-03-10 14:11:54,143 | INFO     | exitmsg: OK
[2026-03-10 16:12:33] 2026-03-10 14:11:54,144 | INFO     | cpuconsumptiontime: 55384 s
[2026-03-10 16:12:33] 2026-03-10 14:11:54,144 | INFO     | nevents: 400
[2026-03-10 16:12:33] 2026-03-10 14:11:54,144 | INFO     | neventsw: 0
[2026-03-10 16:12:33] 2026-03-10 14:11:54,144 | INFO     | pid: 183744
[2026-03-10 16:12:33] 2026-03-10 14:11:54,144 | INFO     | pgrp: 183744
[2026-03-10 16:12:33] 2026-03-10 14:11:54,144 | INFO     | corecount: 4
[2026-03-10 16:12:33] 2026-03-10 14:11:54,144 | INFO     | event service: False
[2026-03-10 16:12:33] 2026-03-10 14:11:54,144 | INFO     | sizes: {0: 2280326, 11: 2280326, 14192: 2310942, 14193: 2319954, 14194: 2320204}
[2026-03-10 16:12:33] 2026-03-10 14:11:54,144 | INFO     | --------------------------------------------------
[2026-03-10 16:12:33] 2026-03-10 14:11:54,145 | INFO     | 
[2026-03-10 16:12:33] 2026-03-10 14:11:54,145 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2026-03-10 16:12:33] 2026-03-10 14:11:54,162 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 16:12:33] 2026-03-10 14:11:54,163 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 16:12:33] 2026-03-10 14:11:54,163 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 16:12:33] 2026-03-10 14:11:54,163 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 16:12:33] 2026-03-10 14:11:54,163 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 16:12:33] 2026-03-10 14:11:54,163 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 16:12:33] 2026-03-10 14:11:54,163 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 16:12:33] 2026-03-10 14:11:54,164 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 16:12:33] 2026-03-10 14:11:54,164 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 16:12:33] 2026-03-10 14:11:54,164 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 16:12:33] 2026-03-10 14:11:54,164 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 16:12:33] 2026-03-10 14:11:54,164 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 16:12:33] 2026-03-10 14:11:54,164 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 16:12:33] 2026-03-10 14:11:54,164 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 16:12:33] 2026-03-10 14:11:54,164 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 16:12:33] 2026-03-10 14:11:54,165 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 16:12:33] 2026-03-10 14:11:54,165 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 16:12:33] 2026-03-10 14:11:54,165 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 16:12:33] 2026-03-10 14:11:54,165 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 16:12:33] 2026-03-10 14:11:54,165 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 16:12:33] 2026-03-10 14:11:54,165 | INFO     | job 7035669127 has completed (purged errors)
[2026-03-10 16:12:33] 2026-03-10 14:11:54,165 | INFO     | overall cleanup function is called
[2026-03-10 16:12:33] 2026-03-10 14:11:55,170 | INFO     | --- collectZombieJob: --- 10, [183744]
[2026-03-10 16:12:33] 2026-03-10 14:11:55,170 | INFO     | zombie collector waiting for pid 183744
[2026-03-10 16:12:33] 2026-03-10 14:11:55,170 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 16:12:33] 2026-03-10 14:11:55,171 | INFO     | collected zombie processes
[2026-03-10 16:12:33] 2026-03-10 14:11:55,171 | INFO     | will attempt to kill all subprocesses of pid=183744
[2026-03-10 16:12:33] 2026-03-10 14:11:55,397 | INFO     | process IDs to be killed: [183744] (in reverse order)
[2026-03-10 16:12:33] 2026-03-10 14:11:55,458 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 16:12:33] 2026-03-10 14:11:55,459 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 16:12:33] 2026-03-10 14:11:55,463 | INFO     | did not find any defunct processes belonging to 183744
[2026-03-10 16:12:33] 2026-03-10 14:11:55,467 | INFO     | did not find any defunct processes belonging to 183744
[2026-03-10 16:12:33] 2026-03-10 14:11:55,467 | INFO     | ready for new job
[2026-03-10 16:12:33] 2026-03-10 14:11:55,467 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 16:12:33] 2026-03-10 14:11:55,469 | INFO     | **************************************
[2026-03-10 16:12:33] 2026-03-10 14:11:55,469 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 16:12:33] 2026-03-10 14:11:55,469 | INFO     | **************************************
[2026-03-10 16:12:33] 2026-03-10 14:11:55,469 | INFO     | 
[2026-03-10 16:12:33] 2026-03-10 14:11:55,472 | INFO     | architecture information:
[2026-03-10 16:12:33] 2026-03-10 14:11:55,472 | INFO     | executing command: cat /etc/os-release
[2026-03-10 16:12:33] 2026-03-10 14:11:55,483 | INFO     | cat /etc/os-release:
[2026-03-10 16:12:33] NAME="CentOS Linux"
[2026-03-10 16:12:33] VERSION="7 (Core)"
[2026-03-10 16:12:33] ID="centos"
[2026-03-10 16:12:33] ID_LIKE="rhel fedora"
[2026-03-10 16:12:33] VERSION_ID="7"
[2026-03-10 16:12:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 16:12:33] ANSI_COLOR="0;31"
[2026-03-10 16:12:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 16:12:33] HOME_URL="https://www.centos.org/"
[2026-03-10 16:12:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 16:12:33] 
[2026-03-10 16:12:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 16:12:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 16:12:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 16:12:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 16:12:33] 
[2026-03-10 16:12:33] 2026-03-10 14:11:55,483 | INFO     | **************************************
[2026-03-10 16:12:33] 2026-03-10 14:11:55,986 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2026-03-10 16:12:33] 2026-03-10 14:11:56,001 | INFO     | sufficient remaining disk space (2949502730240 B)
[2026-03-10 16:12:33] 2026-03-10 14:11:56,001 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 16:12:33] 2026-03-10 14:11:56,001 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 16:12:33] 2026-03-10 14:11:56,002 | INFO     | update_server=False
[2026-03-10 16:12:33] 2026-03-10 14:11:56,002 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 16:12:33] 2026-03-10 14:11:56,002 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 16:12:33] 2026-03-10 14:11:56,609 | INFO     | all payload control threads have been joined
[2026-03-10 16:12:33] 2026-03-10 14:11:56,678 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 16:12:33] 2026-03-10 14:11:56,742 | INFO     | all data control threads have been joined
[2026-03-10 16:12:33] 2026-03-10 14:11:56,810 | INFO     | all job control threads have been joined
[2026-03-10 16:12:33] 2026-03-10 14:11:56,996 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 16:12:33] 2026-03-10 14:11:56,997 | INFO     | aborting loop
[2026-03-10 16:12:33] 2026-03-10 14:11:57,007 | INFO     | [job] retrieve thread has finished
[2026-03-10 16:12:33] 2026-03-10 14:11:57,302 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 16:12:33] 2026-03-10 14:11:57,346 | INFO     | [data] copytool_in thread has finished
[2026-03-10 16:12:33] 2026-03-10 14:11:57,615 | INFO     | [payload] control thread has finished
[2026-03-10 16:12:33] 2026-03-10 14:11:57,733 | INFO     | [payload] validate_post thread has finished
[2026-03-10 16:12:33] 2026-03-10 14:11:57,748 | INFO     | [data] control thread has finished
[2026-03-10 16:12:33] 2026-03-10 14:11:57,816 | INFO     | [job] control thread has finished
[2026-03-10 16:12:33] 2026-03-10 14:11:58,002 | INFO     | [job] job monitor thread has finished
[2026-03-10 16:12:33] 2026-03-10 14:11:58,039 | INFO     | [job] validate thread has finished
[2026-03-10 16:12:33] 2026-03-10 14:11:58,045 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 16:12:33] 2026-03-10 14:11:58,358 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 16:12:33] 2026-03-10 14:11:58,381 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 16:12:33] 2026-03-10 14:11:58,558 | INFO     | [payload] failed_post thread has finished
[2026-03-10 16:12:33] 2026-03-10 14:11:58,682 | INFO     | [data] copytool_out thread has finished
[2026-03-10 16:12:33] 2026-03-10 14:11:58,908 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 16:12:33] 2026-03-10 14:11:59,913 | INFO     | [job] queue monitor thread has finished
[2026-03-10 16:12:33] 2026-03-10 14:12:00,008 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 16:12:33] 2026-03-10 14:12:27,306 | INFO     | PID=178808 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-10 16:12:33] 2026-03-10 14:12:27,306 | INFO     | .. there are 9 such processes running
[2026-03-10 16:12:33] 2026-03-10 14:12:27,307 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 16:12:33] 2026-03-10 14:12:27,307 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 16:12:33] 2026-03-10 14:12:27,307 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 16:12:33] 2026-03-10 14:12:27,773 | INFO     | [monitor] cgroup control has ended
[2026-03-10 16:12:33] 2026-03-10 14:12:28,149 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140008095094592)>', '<ExcThread(monitor, started 140007327127296)>']
[2026-03-10 16:12:33] 2026-03-10 14:12:28,312 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 16:12:33] 2026-03-10 14:12:28,312 | INFO     | [monitor] control thread has ended
[2026-03-10 16:12:33] 2026-03-10 14:12:33,174 | INFO     | all workflow threads have been joined
[2026-03-10 16:12:33] 2026-03-10 14:12:33,174 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 16:12:33] 2026-03-10 14:12:33,175 | INFO     | traces error code: 0
[2026-03-10 16:12:33] 2026-03-10 14:12:33,175 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 16:12:33] 2026-03-10 14:12:33,272 [wrapper] ==== pilot stdout END ====
[2026-03-10 16:12:33] 2026-03-10 14:12:33,275 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 16:12:33] 2026-03-10 14:12:33,277 [wrapper] pilotpid: 178808
[2026-03-10 16:12:33] 2026-03-10 14:12:33,279 [wrapper] Pilot exit status: 0
[2026-03-10 16:12:33] 2026-03-10 14:12:33,287 [wrapper] pandaids: 7035669127
[2026-03-10 16:12:33] 2026-03-10 14:12:33,321 [wrapper] cleanup supervisor_pilot  434076 178809
[2026-03-10 16:12:33] 2026-03-10 14:12:33,323 [wrapper] Test setup, not cleaning
[2026-03-10 16:12:33] 2026-03-10 14:12:33,325 [wrapper] apfmon messages muted
[2026-03-10 16:12:33] 2026-03-10 14:12:33,327 [wrapper] ==== wrapper stdout END ====
[2026-03-10 16:12:33] 2026-03-10 14:12:33,329 [wrapper] ==== wrapper stderr END ====
[2026-03-10 16:12:33]  *** Error codes and diagnostics ***
[2026-03-10 16:12:33]     "exeErrorCode": 0,
[2026-03-10 16:12:33]     "exeErrorDiag": "",
[2026-03-10 16:12:33]     "pilotErrorCode": 0,
[2026-03-10 16:12:33]     "pilotErrorDiag": "",
[2026-03-10 16:12:33]  *** Listing of results directory ***
[2026-03-10 16:12:33] total 421516
[2026-03-10 16:12:33] -rw-r--r-- 1 boinc boinc    584627 Mar  2 01:37 pilot3.tar.gz
[2026-03-10 16:12:33] -rwx------ 1 boinc boinc     36322 Mar  2 01:40 runpilot2-wrapper.sh
[2026-03-10 16:12:33] -rw-r--r-- 1 boinc boinc      5111 Mar  2 01:41 queuedata.json
[2026-03-10 16:12:33] -rw-r--r-- 1 boinc boinc       100 Mar 10 12:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 16:12:33] -rwxr-xr-x 1 boinc boinc      7986 Mar 10 12:14 run_atlas
[2026-03-10 16:12:33] -rw-r--r-- 1 boinc boinc       105 Mar 10 12:14 job.xml
[2026-03-10 16:12:33] -rw-r--r-- 2 boinc boinc     15845 Mar 10 12:14 start_atlas.sh
[2026-03-10 16:12:33] drwxrwx--x 2 boinc boinc      4096 Mar 10 12:14 shared
[2026-03-10 16:12:33] -rw-r--r-- 2 boinc boinc    597973 Mar 10 12:14 input.tar.gz
[2026-03-10 16:12:33] -rw-r--r-- 1 boinc boinc      6602 Mar 10 12:14 init_data.xml
[2026-03-10 16:12:33] -rw-r--r-- 2 boinc boinc 221686383 Mar 10 12:14 EVNT.48453817._000003.pool.root.1
[2026-03-10 16:12:33] -rw-r--r-- 1 boinc boinc         0 Mar 10 12:14 boinc_lockfile
[2026-03-10 16:12:33] -rw-r--r-- 1 boinc boinc      2626 Mar 10 12:14 pandaJob.out
[2026-03-10 16:12:33] -rw------- 1 boinc boinc   1005081 Mar 10 12:15 agis_schedconf.cvmfs.json
[2026-03-10 16:12:33] -rw------- 1 boinc boinc       434 Mar 10 12:15 workernode_map.json
[2026-03-10 16:12:33] drwx------ 5 boinc boinc      4096 Mar 10 12:15 pilot3
[2026-03-10 16:12:33] -rw------- 1 boinc boinc 201177897 Mar 10 16:11 HITS.48844649._000072.pool.root.1
[2026-03-10 16:12:33] -rw-r--r-- 1 boinc boinc       530 Mar 10 16:11 boinc_task_state.xml
[2026-03-10 16:12:33] -rw------- 1 boinc boinc        95 Mar 10 16:11 pilot_heartbeat.json
[2026-03-10 16:12:33] -rw------- 1 boinc boinc      1033 Mar 10 16:11 memory_monitor_summary.json
[2026-03-10 16:12:33] -rw------- 1 boinc boinc   1511578 Mar 10 16:11 agis_ddmendpoints.agis.ALL.json
[2026-03-10 16:12:33] -rw------- 1 boinc boinc    416785 Mar 10 16:11 log.48844649._000072.job.log.tgz.1
[2026-03-10 16:12:33] -rw------- 1 boinc boinc      6334 Mar 10 16:11 heartbeat.json
[2026-03-10 16:12:33] -rw-r--r-- 1 boinc boinc        28 Mar 10 16:12 wrapper_checkpoint.txt
[2026-03-10 16:12:33] -rw-r--r-- 1 boinc boinc      8192 Mar 10 16:12 boinc_mmap_file
[2026-03-10 16:12:33] -rw------- 1 boinc boinc      4827 Mar 10 16:12 pilotlog.txt
[2026-03-10 16:12:33] -rw------- 1 boinc boinc   1998609 Mar 10 16:12 log.48844649._000072.job.log.1
[2026-03-10 16:12:33] -rw------- 1 boinc boinc       357 Mar 10 16:12 output.list
[2026-03-10 16:12:33] -rw-r--r-- 1 boinc boinc       620 Mar 10 16:12 runtime_log
[2026-03-10 16:12:33] -rw------- 1 boinc boinc   2437120 Mar 10 16:12 result.tar.gz
[2026-03-10 16:12:33] -rw-r--r-- 1 boinc boinc      9141 Mar 10 16:12 runtime_log.err
[2026-03-10 16:12:33] -rw------- 1 boinc boinc       729 Mar 10 16:12 N4sKDmuZ5G9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmb3BLDmV1oNMo.diag
[2026-03-10 16:12:33] -rw-r--r-- 1 boinc boinc     21466 Mar 10 16:12 stderr.txt
[2026-03-10 16:12:33] HITS file was successfully produced:
[2026-03-10 16:12:33] -rw------- 1 boinc boinc 201177897 Mar 10 16:11 shared/HITS.pool.root.1
[2026-03-10 16:12:33]  *** Contents of shared directory: ***
[2026-03-10 16:12:33] total 415944
[2026-03-10 16:12:33] -rw-r--r-- 2 boinc boinc     15845 Mar 10 12:14 start_atlas.sh
[2026-03-10 16:12:33] -rw-r--r-- 2 boinc boinc    597973 Mar 10 12:14 input.tar.gz
[2026-03-10 16:12:33] -rw-r--r-- 2 boinc boinc 221686383 Mar 10 12:14 ATLAS.root_0
[2026-03-10 16:12:33] -rw------- 1 boinc boinc 201177897 Mar 10 16:11 HITS.pool.root.1
[2026-03-10 16:12:33] -rw------- 1 boinc boinc   2437120 Mar 10 16:12 result.tar.gz
16:12:35 (165262): run_atlas exited; CPU time 55991.781001
16:12:35 (165262): called boinc_finish(0)

</stderr_txt>
]]>

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