Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:18:06 (1214468): wrapper (7.7.26015): starting
06:18:06 (1214468): wrapper: running run_atlas (--nthreads 9)
[2026-03-10 06:18:06] Arguments: --nthreads 9
[2026-03-10 06:18:06] Threads: 9
[2026-03-10 06:18:06] Checking for CVMFS
[2026-03-10 06:18:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-10 06:18:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-10 06:18:06] Running cvmfs_config stat atlas.cern.ch
[2026-03-10 06:18:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-10 06:18:07] 2.13.3.0 11958 109146 215708 157110 2 64 34917590 40960000 25553 16776704 0 308486699 99.684 275060038 36111 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-10 06:18:07] CVMFS is ok
[2026-03-10 06:18:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 06:18:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 06:18:07] Further information can be found at the LHC@home message board.
[2026-03-10 06:18:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 06:18:07] Checking for apptainer binary...
[2026-03-10 06:18:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-10 06:18:07] Running /usr/bin/apptainer --version
[2026-03-10 06:18:07] apptainer version 1.4.5-2.el9
[2026-03-10 06:18:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 06:18:08] c-212-1.aglt2.org
[2026-03-10 06:18:08] apptainer works
[2026-03-10 06:18:08] Set ATHENA_PROC_NUMBER=9
[2026-03-10 06:18:08] Set ATHENA_CORE_NUMBER=9
[2026-03-10 06:18:08] Starting ATLAS job with PandaID=7041050024
[2026-03-10 06:18:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 08:20:13]  *** The last 200 lines of the pilot log: ***
[2026-03-10 08:20:13] 2026-03-10 12:19:37,480 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-10 08:20:13] 2026-03-10 12:19:37,480 | INFO     | reading metadata from: /tmp/boinchome/slots/2/PanDA_Pilot-7041050024/jobReport.json
[2026-03-10 08:20:13] 2026-03-10 12:19:37,482 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/2/workernode_map.json
[2026-03-10 08:20:13] 2026-03-10 12:19:37,482 | INFO     | this job has now completed (state=finished)
[2026-03-10 08:20:13] 2026-03-10 12:19:37,483 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 08:20:13] 2026-03-10 12:19:37,483 | INFO     | log transfer has been attempted: DONE
[2026-03-10 08:20:13] 2026-03-10 12:19:37,483 | INFO     | job 7041050024 has finished - writing final server update
[2026-03-10 08:20:13] 2026-03-10 12:19:37,483 | INFO     | total number of processed events: 400 (read)
[2026-03-10 08:20:13] 2026-03-10 12:19:37,497 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7041050024/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 08:20:13] 2026-03-10 12:19:37,497 | INFO     | extracted standard info from prmon json
[2026-03-10 08:20:13] 2026-03-10 12:19:37,497 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 08:20:13] 2026-03-10 12:19:37,497 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 08:20:13] 2026-03-10 12:19:37,498 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 08:20:13] 2026-03-10 12:19:37,498 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 08:20:13] 2026-03-10 12:19:37,500 | INFO     | fitting pss+swap vs Time
[2026-03-10 08:20:13] 2026-03-10 12:19:37,500 | INFO     | sum of square deviations: 522478795.98319346
[2026-03-10 08:20:13] 2026-03-10 12:19:37,500 | INFO     | sum of deviations: 8147209590.798325
[2026-03-10 08:20:13] 2026-03-10 12:19:37,500 | INFO     | mean x: 1773141550.092437
[2026-03-10 08:20:13] 2026-03-10 12:19:37,501 | INFO     | mean y: 2547772.1092436975
[2026-03-10 08:20:13] 2026-03-10 12:19:37,501 | INFO     | intersect: -27646719439.915184
[2026-03-10 08:20:13] 2026-03-10 12:19:37,501 | INFO     | chi2: 4.079958336602391
[2026-03-10 08:20:13] 2026-03-10 12:19:37,501 | INFO     | sum of square deviations: 459346083.4385968
[2026-03-10 08:20:13] 2026-03-10 12:19:37,502 | INFO     | sum of deviations: 16534614436.210539
[2026-03-10 08:20:13] 2026-03-10 12:19:37,502 | INFO     | mean x: 1773141397.5964913
[2026-03-10 08:20:13] 2026-03-10 12:19:37,502 | INFO     | mean y: 2567372.0263157897
[2026-03-10 08:20:13] 2026-03-10 12:19:37,502 | INFO     | intersect: -63823402647.50602
[2026-03-10 08:20:13] 2026-03-10 12:19:37,502 | INFO     | chi2: 3.3385082409712084
[2026-03-10 08:20:13] 2026-03-10 12:19:37,502 | INFO     | current chi2=3.3385082409712084 (change=18.17298203708201 %)
[2026-03-10 08:20:13] 2026-03-10 12:19:37,502 | INFO     | right removable region: 113
[2026-03-10 08:20:13] 2026-03-10 12:19:37,503 | INFO     | sum of square deviations: 459339373.4385968
[2026-03-10 08:20:13] 2026-03-10 12:19:37,503 | INFO     | sum of deviations: -24036842356.245617
[2026-03-10 08:20:13] 2026-03-10 12:19:37,503 | INFO     | mean x: 1773141702.5964913
[2026-03-10 08:20:13] 2026-03-10 12:19:37,503 | INFO     | mean y: 2624992.3859649124
[2026-03-10 08:20:13] 2026-03-10 12:19:37,503 | INFO     | intersect: 92789636176.59972
[2026-03-10 08:20:13] 2026-03-10 12:19:37,504 | INFO     | chi2: 1.0970455268703312
[2026-03-10 08:20:13] 2026-03-10 12:19:37,504 | INFO     | current chi2=1.0970455268703312 (change=73.11135466682481 %)
[2026-03-10 08:20:13] 2026-03-10 12:19:37,504 | INFO     | sum of square deviations: 401502375.8899085
[2026-03-10 08:20:13] 2026-03-10 12:19:37,505 | INFO     | sum of deviations: -30286644028.422005
[2026-03-10 08:20:13] 2026-03-10 12:19:37,505 | INFO     | mean x: 1773141855.1009173
[2026-03-10 08:20:13] 2026-03-10 12:19:37,505 | INFO     | mean y: 2641302.220183486
[2026-03-10 08:20:13] 2026-03-10 12:19:37,505 | INFO     | intersect: 133756560088.6497
[2026-03-10 08:20:13] 2026-03-10 12:19:37,505 | INFO     | chi2: 0.892418990424611
[2026-03-10 08:20:13] 2026-03-10 12:19:37,506 | INFO     | current chi2=0.892418990424611 (change=18.652510897107614 %)
[2026-03-10 08:20:13] 2026-03-10 12:19:37,506 | INFO     | left removable region: 20
[2026-03-10 08:20:13] 2026-03-10 12:19:37,506 | INFO     | sum of square deviations: 249368252.1290326
[2026-03-10 08:20:13] 2026-03-10 12:19:37,516 | INFO     | sum of deviations: -16655856359.225817
[2026-03-10 08:20:13] 2026-03-10 12:19:37,516 | INFO     | mean x: 1773141977.096774
[2026-03-10 08:20:13] 2026-03-10 12:19:37,516 | INFO     | mean y: 2654428.2473118277
[2026-03-10 08:20:13] 2026-03-10 12:19:37,516 | INFO     | intersect: 118434723558.5067
[2026-03-10 08:20:13] 2026-03-10 12:19:37,517 | INFO     | chi2: 0.0715875176507832
[2026-03-10 08:20:13] 2026-03-10 12:19:37,517 | INFO     | current memory leak: -66.79 B/s (using 93 data points, chi2=0.07)
[2026-03-10 08:20:13] 2026-03-10 12:19:37,517 | INFO     | could have reported an average CPU frequency of 3167 MHz (8 samples)
[2026-03-10 08:20:13] 2026-03-10 12:19:37,517 | INFO     | ..............................
[2026-03-10 08:20:13] 2026-03-10 12:19:37,517 | INFO     | . Timing measurements:
[2026-03-10 08:20:13] 2026-03-10 12:19:37,517 | INFO     | . get job = 0 s
[2026-03-10 08:20:13] 2026-03-10 12:19:37,518 | INFO     | . initial setup = 14 s
[2026-03-10 08:20:13] 2026-03-10 12:19:37,518 | INFO     | . payload setup = 14 s
[2026-03-10 08:20:13] 2026-03-10 12:19:37,518 | INFO     | . stage-in = 0 s
[2026-03-10 08:20:13] 2026-03-10 12:19:37,518 | INFO     | . payload execution = 7230 s
[2026-03-10 08:20:13] 2026-03-10 12:19:37,518 | INFO     | . stage-out = 2 s
[2026-03-10 08:20:13] 2026-03-10 12:19:37,518 | INFO     | . log creation = 0 s
[2026-03-10 08:20:13] 2026-03-10 12:19:37,518 | INFO     | ..............................
[2026-03-10 08:20:13] 2026-03-10 12:19:37,634 | INFO     | 
[2026-03-10 08:20:13] 2026-03-10 12:19:37,638 | INFO     | job summary report
[2026-03-10 08:20:13] 2026-03-10 12:19:37,638 | INFO     | --------------------------------------------------
[2026-03-10 08:20:13] 2026-03-10 12:19:37,638 | INFO     | PanDA job id: 7041050024
[2026-03-10 08:20:13] 2026-03-10 12:19:37,638 | INFO     | task id: 48955006
[2026-03-10 08:20:13] 2026-03-10 12:19:37,638 | INFO     | errors: (none)
[2026-03-10 08:20:13] 2026-03-10 12:19:37,638 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 08:20:13] 2026-03-10 12:19:37,638 | INFO     | pilot state: finished 
[2026-03-10 08:20:13] 2026-03-10 12:19:37,638 | INFO     | transexitcode: 0
[2026-03-10 08:20:13] 2026-03-10 12:19:37,639 | INFO     | exeerrorcode: 0
[2026-03-10 08:20:13] 2026-03-10 12:19:37,639 | INFO     | exeerrordiag: 
[2026-03-10 08:20:13] 2026-03-10 12:19:37,639 | INFO     | exitcode: 0
[2026-03-10 08:20:13] 2026-03-10 12:19:37,639 | INFO     | exitmsg: OK
[2026-03-10 08:20:13] 2026-03-10 12:19:37,639 | INFO     | cpuconsumptiontime: 30299 s
[2026-03-10 08:20:13] 2026-03-10 12:19:37,639 | INFO     | nevents: 400
[2026-03-10 08:20:13] 2026-03-10 12:19:37,639 | INFO     | neventsw: 0
[2026-03-10 08:20:13] 2026-03-10 12:19:37,639 | INFO     | pid: 1224098
[2026-03-10 08:20:13] 2026-03-10 12:19:37,639 | INFO     | pgrp: 1224098
[2026-03-10 08:20:13] 2026-03-10 12:19:37,639 | INFO     | corecount: 9
[2026-03-10 08:20:13] 2026-03-10 12:19:37,639 | INFO     | event service: False
[2026-03-10 08:20:13] 2026-03-10 12:19:37,639 | INFO     | sizes: {0: 2279142, 1: 2280260, 2: 2280260, 7246: 2307609, 7249: 2316663, 7250: 2316801}
[2026-03-10 08:20:13] 2026-03-10 12:19:37,639 | INFO     | --------------------------------------------------
[2026-03-10 08:20:13] 2026-03-10 12:19:37,639 | INFO     | 
[2026-03-10 08:20:13] 2026-03-10 12:19:37,640 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-10 08:20:13] 2026-03-10 12:19:37,677 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 08:20:13] 2026-03-10 12:19:37,677 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 08:20:13] 2026-03-10 12:19:37,677 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 08:20:13] 2026-03-10 12:19:37,678 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 08:20:13] 2026-03-10 12:19:37,678 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 08:20:13] 2026-03-10 12:19:37,678 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 08:20:13] 2026-03-10 12:19:37,678 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 08:20:13] 2026-03-10 12:19:37,678 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 08:20:13] 2026-03-10 12:19:37,678 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 08:20:13] 2026-03-10 12:19:37,678 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 08:20:13] 2026-03-10 12:19:37,678 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 08:20:13] 2026-03-10 12:19:37,678 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 08:20:13] 2026-03-10 12:19:37,678 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 08:20:13] 2026-03-10 12:19:37,678 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 08:20:13] 2026-03-10 12:19:37,678 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 08:20:13] 2026-03-10 12:19:37,679 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 08:20:13] 2026-03-10 12:19:37,679 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 08:20:13] 2026-03-10 12:19:37,679 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 08:20:13] 2026-03-10 12:19:37,679 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 08:20:13] 2026-03-10 12:19:37,679 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 08:20:13] 2026-03-10 12:19:37,679 | INFO     | job 7041050024 has completed (purged errors)
[2026-03-10 08:20:13] 2026-03-10 12:19:37,679 | INFO     | overall cleanup function is called
[2026-03-10 08:20:13] 2026-03-10 12:19:38,689 | INFO     | --- collectZombieJob: --- 10, [1224098]
[2026-03-10 08:20:13] 2026-03-10 12:19:38,689 | INFO     | zombie collector waiting for pid 1224098
[2026-03-10 08:20:13] 2026-03-10 12:19:38,689 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 08:20:13] 2026-03-10 12:19:38,689 | INFO     | collected zombie processes
[2026-03-10 08:20:13] 2026-03-10 12:19:38,689 | INFO     | will attempt to kill all subprocesses of pid=1224098
[2026-03-10 08:20:13] 2026-03-10 12:19:39,308 | INFO     | PID=1218978 has CPU usage=13.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-10 08:20:13] 2026-03-10 12:19:39,308 | INFO     | .. there are 31 such processes running
[2026-03-10 08:20:13] 2026-03-10 12:19:39,851 | INFO     | process IDs to be killed: [1224098] (in reverse order)
[2026-03-10 08:20:13] 2026-03-10 12:19:40,203 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 08:20:13] 2026-03-10 12:19:40,203 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 08:20:13] 2026-03-10 12:19:40,221 | INFO     | did not find any defunct processes belonging to 1224098
[2026-03-10 08:20:13] 2026-03-10 12:19:40,248 | INFO     | did not find any defunct processes belonging to 1224098
[2026-03-10 08:20:13] 2026-03-10 12:19:40,248 | INFO     | ready for new job
[2026-03-10 08:20:13] 2026-03-10 12:19:40,248 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 08:20:13] 2026-03-10 12:19:40,268 | INFO     | **************************************
[2026-03-10 08:20:13] 2026-03-10 12:19:40,268 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 08:20:13] 2026-03-10 12:19:40,268 | INFO     | **************************************
[2026-03-10 08:20:13] 2026-03-10 12:19:40,268 | INFO     | 
[2026-03-10 08:20:13] 2026-03-10 12:19:40,298 | INFO     | architecture information:
[2026-03-10 08:20:13] 2026-03-10 12:19:40,317 | INFO     | executing command: cat /etc/os-release
[2026-03-10 08:20:13] 2026-03-10 12:19:40,433 | INFO     | cat /etc/os-release:
[2026-03-10 08:20:13] NAME="CentOS Linux"
[2026-03-10 08:20:13] VERSION="7 (Core)"
[2026-03-10 08:20:13] ID="centos"
[2026-03-10 08:20:13] ID_LIKE="rhel fedora"
[2026-03-10 08:20:13] VERSION_ID="7"
[2026-03-10 08:20:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 08:20:13] ANSI_COLOR="0;31"
[2026-03-10 08:20:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 08:20:13] HOME_URL="https://www.centos.org/"
[2026-03-10 08:20:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 08:20:13] 
[2026-03-10 08:20:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 08:20:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 08:20:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 08:20:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 08:20:13] 
[2026-03-10 08:20:13] 2026-03-10 12:19:40,433 | INFO     | **************************************
[2026-03-10 08:20:13] 2026-03-10 12:19:40,938 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-10 08:20:13] 2026-03-10 12:19:41,031 | INFO     | sufficient remaining disk space (125042688000 B)
[2026-03-10 08:20:13] 2026-03-10 12:19:41,032 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 08:20:13] 2026-03-10 12:19:41,032 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 08:20:13] 2026-03-10 12:19:41,032 | INFO     | update_server=False
[2026-03-10 08:20:13] 2026-03-10 12:19:41,032 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 08:20:13] 2026-03-10 12:19:41,040 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 08:20:13] 2026-03-10 12:19:41,040 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 08:20:13] 2026-03-10 12:19:41,040 | INFO     | aborting loop
[2026-03-10 08:20:13] 2026-03-10 12:19:41,558 | INFO     | all data control threads have been joined
[2026-03-10 08:20:13] 2026-03-10 12:19:41,861 | INFO     | all job control threads have been joined
[2026-03-10 08:20:13] 2026-03-10 12:19:42,038 | INFO     | [job] retrieve thread has finished
[2026-03-10 08:20:13] 2026-03-10 12:19:42,046 | INFO     | [job] job monitor thread has finished
[2026-03-10 08:20:13] 2026-03-10 12:19:42,172 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 08:20:13] 2026-03-10 12:19:42,176 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 08:20:13] 2026-03-10 12:19:42,189 | INFO     | all payload control threads have been joined
[2026-03-10 08:20:13] 2026-03-10 12:19:42,517 | INFO     | [payload] failed_post thread has finished
[2026-03-10 08:20:13] 2026-03-10 12:19:42,564 | INFO     | [data] control thread has finished
[2026-03-10 08:20:13] 2026-03-10 12:19:42,648 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 08:20:13] 2026-03-10 12:19:42,872 | INFO     | [job] control thread has finished
[2026-03-10 08:20:13] 2026-03-10 12:19:42,933 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 08:20:13] 2026-03-10 12:19:42,971 | INFO     | [data] copytool_in thread has finished
[2026-03-10 08:20:13] 2026-03-10 12:19:43,015 | INFO     | [payload] validate_post thread has finished
[2026-03-10 08:20:13] 2026-03-10 12:19:43,048 | INFO     | [data] copytool_out thread has finished
[2026-03-10 08:20:13] 2026-03-10 12:19:43,202 | INFO     | [payload] control thread has finished
[2026-03-10 08:20:13] 2026-03-10 12:19:43,247 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 08:20:13] 2026-03-10 12:19:43,489 | INFO     | [job] validate thread has finished
[2026-03-10 08:20:13] 2026-03-10 12:19:43,653 | INFO     | [job] queue monitor thread has finished
[2026-03-10 08:20:13] 2026-03-10 12:19:47,262 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 08:20:13] 2026-03-10 12:19:52,036 | INFO     | job.realtimelogging is not enabled
[2026-03-10 08:20:13] 2026-03-10 12:19:53,042 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 08:20:13] 2026-03-10 12:19:58,045 | INFO     | [monitor] cgroup control has ended
[2026-03-10 08:20:13] 2026-03-10 12:19:59,362 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140566605289280)>', '<ExcThread(monitor, started 140566251677440)>']
[2026-03-10 08:20:13] 2026-03-10 12:20:04,413 | INFO     | all workflow threads have been joined
[2026-03-10 08:20:13] 2026-03-10 12:20:04,413 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 08:20:13] 2026-03-10 12:20:04,413 | INFO     | traces error code: 0
[2026-03-10 08:20:13] 2026-03-10 12:20:04,413 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 08:20:13] 2026-03-10 12:20:13,047 | INFO     | PID=1218978 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 08:20:13] 2026-03-10 12:20:13,047 | INFO     | .. there are 31 such processes running
[2026-03-10 08:20:13] 2026-03-10 12:20:13,051 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 08:20:13] 2026-03-10 12:20:13,051 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 08:20:13] 2026-03-10 12:20:13,051 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 08:20:13] 2026-03-10 12:20:13,051 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 08:20:13] 2026-03-10 12:20:13,051 | INFO     | [monitor] control thread has ended
[2026-03-10 08:20:13] 2026-03-10 12:20:13,365 [wrapper] ==== pilot stdout END ====
[2026-03-10 08:20:13] 2026-03-10 12:20:13,368 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 08:20:13] 2026-03-10 12:20:13,371 [wrapper] pilotpid: 1218978
[2026-03-10 08:20:13] 2026-03-10 12:20:13,373 [wrapper] Pilot exit status: 0
[2026-03-10 08:20:13] 2026-03-10 12:20:13,401 [wrapper] pandaids: 7041050024
[2026-03-10 08:20:13] 2026-03-10 12:20:13,552 [wrapper] cleanup supervisor_pilot 1597803 1218980
[2026-03-10 08:20:13] 2026-03-10 12:20:13,555 [wrapper] Test setup, not cleaning
[2026-03-10 08:20:13] 2026-03-10 12:20:13,557 [wrapper] apfmon messages muted
[2026-03-10 08:20:13] 2026-03-10 12:20:13,560 [wrapper] ==== wrapper stdout END ====
[2026-03-10 08:20:13] 2026-03-10 12:20:13,562 [wrapper] ==== wrapper stderr END ====
[2026-03-10 08:20:13]  *** Error codes and diagnostics ***
[2026-03-10 08:20:13]     "exeErrorCode": 0,
[2026-03-10 08:20:13]     "exeErrorDiag": "",
[2026-03-10 08:20:13]     "pilotErrorCode": 0,
[2026-03-10 08:20:13]     "pilotErrorDiag": "",
[2026-03-10 08:20:13]  *** Listing of results directory ***
[2026-03-10 08:20:13] total 613916
[2026-03-10 08:20:13] -rw-r--r--. 1 boincer umatlas    584627 Mar  9 14:27 pilot3.tar.gz
[2026-03-10 08:20:13] -rwx------. 1 boincer umatlas     36322 Mar  9 14:30 runpilot2-wrapper.sh
[2026-03-10 08:20:13] -rw-r--r--. 1 boincer umatlas      5111 Mar  9 14:31 queuedata.json
[2026-03-10 08:20:13] -rw-r--r--. 1 boincer umatlas       100 Mar 10 06:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 08:20:13] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 10 06:18 run_atlas
[2026-03-10 08:20:13] -rw-r--r--. 1 boincer umatlas       105 Mar 10 06:18 job.xml
[2026-03-10 08:20:13] -rw-r--r--. 2 boincer umatlas 436730011 Mar 10 06:18 EVNT.46701403._000701.pool.root.1
[2026-03-10 08:20:13] -rw-r--r--. 2 boincer umatlas     15845 Mar 10 06:18 start_atlas.sh
[2026-03-10 08:20:13] drwxrwx--x. 2 boincer umatlas      4096 Mar 10 06:18 shared
[2026-03-10 08:20:13] -rw-r--r--. 2 boincer umatlas    597958 Mar 10 06:18 input.tar.gz
[2026-03-10 08:20:13] -rw-r--r--. 1 boincer umatlas         0 Mar 10 06:18 boinc_lockfile
[2026-03-10 08:20:13] -rw-r--r--. 1 boincer umatlas      2565 Mar 10 06:18 pandaJob.out
[2026-03-10 08:20:13] -rw-------. 1 boincer umatlas        57 Mar 10 06:18 setup.sh.local
[2026-03-10 08:20:13] -rw-------. 1 boincer umatlas   1005081 Mar 10 06:18 agis_schedconf.cvmfs.json
[2026-03-10 08:20:13] -rw-------. 1 boincer umatlas   1511578 Mar 10 06:18 agis_ddmendpoints.agis.ALL.json
[2026-03-10 08:20:13] -rw-------. 1 boincer umatlas       429 Mar 10 06:18 workernode_map.json
[2026-03-10 08:20:13] drwx------. 5 boincer umatlas      4096 Mar 10 06:18 pilot3
[2026-03-10 08:20:13] -rw-r--r--. 1 boincer umatlas      6958 Mar 10 08:10 init_data.xml
[2026-03-10 08:20:13] -rw-------. 1 boincer umatlas 185231387 Mar 10 08:18 HITS.48955006._035055.pool.root.1
[2026-03-10 08:20:13] -rw-r--r--. 1 boincer umatlas       530 Mar 10 08:18 boinc_task_state.xml
[2026-03-10 08:20:13] -rw-------. 1 boincer umatlas      1034 Mar 10 08:19 memory_monitor_summary.json
[2026-03-10 08:20:13] -rw-------. 1 boincer umatlas    401106 Mar 10 08:19 log.48955006._035055.job.log.tgz.1
[2026-03-10 08:20:13] -rw-------. 1 boincer umatlas      6340 Mar 10 08:19 heartbeat.json
[2026-03-10 08:20:13] -rw-r--r--. 1 boincer umatlas      8192 Mar 10 08:20 boinc_mmap_file
[2026-03-10 08:20:13] -rw-r--r--. 1 boincer umatlas        27 Mar 10 08:20 wrapper_checkpoint.txt
[2026-03-10 08:20:13] -rw-------. 1 boincer umatlas        95 Mar 10 08:20 pilot_heartbeat.json
[2026-03-10 08:20:13] -rw-------. 1 boincer umatlas       823 Mar 10 08:20 pilotlog.txt
[2026-03-10 08:20:13] -rw-------. 1 boincer umatlas    976291 Mar 10 08:20 log.48955006._035055.job.log.1
[2026-03-10 08:20:13] -rw-------. 1 boincer umatlas       357 Mar 10 08:20 output.list
[2026-03-10 08:20:13] -rw-r--r--. 1 boincer umatlas       620 Mar 10 08:20 runtime_log
[2026-03-10 08:20:13] -rw-------. 1 boincer umatlas   1392640 Mar 10 08:20 result.tar.gz
[2026-03-10 08:20:13] -rw-r--r--. 1 boincer umatlas      9336 Mar 10 08:20 runtime_log.err
[2026-03-10 08:20:13] -rw-------. 1 boincer umatlas       652 Mar 10 08:20 FDJNDm8XuJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDm2maLDm8McGpm.diag
[2026-03-10 08:20:13] -rw-r--r--. 1 boincer umatlas     21382 Mar 10 08:20 stderr.txt
[2026-03-10 08:20:13] HITS file was successfully produced:
[2026-03-10 08:20:13] -rw-------. 1 boincer umatlas 185231387 Mar 10 08:18 shared/HITS.pool.root.1
[2026-03-10 08:20:13]  *** Contents of shared directory: ***
[2026-03-10 08:20:13] total 609356
[2026-03-10 08:20:13] -rw-r--r--. 2 boincer umatlas 436730011 Mar 10 06:18 ATLAS.root_0
[2026-03-10 08:20:13] -rw-r--r--. 2 boincer umatlas     15845 Mar 10 06:18 start_atlas.sh
[2026-03-10 08:20:13] -rw-r--r--. 2 boincer umatlas    597958 Mar 10 06:18 input.tar.gz
[2026-03-10 08:20:13] -rw-------. 1 boincer umatlas 185231387 Mar 10 08:18 HITS.pool.root.1
[2026-03-10 08:20:13] -rw-------. 1 boincer umatlas   1392640 Mar 10 08:20 result.tar.gz
08:20:14 (1214468): run_atlas exited; CPU time 30558.901920
08:20:14 (1214468): called boinc_finish(0)

</stderr_txt>
]]>

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