Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:51:42 (3835282): wrapper (7.7.26015): starting
09:51:42 (3835282): wrapper: running run_atlas (--nthreads 8)
[2026-03-10 09:51:42] Arguments: --nthreads 8
[2026-03-10 09:51:42] Threads: 8
[2026-03-10 09:51:42] Checking for CVMFS
[2026-03-10 09:51:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-10 09:51:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-10 09:51:44] Running cvmfs_config stat atlas.cern.ch
[2026-03-10 09:51:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-10 09:51:46] 2.13.3.0 6324 107646 191756 157116 3 176 34179542 40960000 16698 16776704 0 147749758 99.612 182144693 30491 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-10 09:51:46] CVMFS is ok
[2026-03-10 09:51:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 09:51:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 09:51:46] Further information can be found at the LHC@home message board.
[2026-03-10 09:51:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 09:51:46] Checking for apptainer binary...
[2026-03-10 09:51:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-10 09:51:46] Running /usr/bin/apptainer --version
[2026-03-10 09:51:46] apptainer version 1.4.5-2.el9
[2026-03-10 09:51:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 09:52:06] c-211-8.aglt2.org
[2026-03-10 09:52:06] apptainer works
[2026-03-10 09:52:06] Set ATHENA_PROC_NUMBER=8
[2026-03-10 09:52:06] Set ATHENA_CORE_NUMBER=8
[2026-03-10 09:52:06] Starting ATLAS job with PandaID=7042039316
[2026-03-10 09:52:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 15:42:05]  *** The last 200 lines of the pilot log: ***
[2026-03-10 15:42:05] 2026-03-10 19:41:18,764 | INFO     | total number of processed events: 400 (read)
[2026-03-10 15:42:05] 2026-03-10 19:41:18,885 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7042039316/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 15:42:05] 2026-03-10 19:41:18,885 | INFO     | extracted standard info from prmon json
[2026-03-10 15:42:05] 2026-03-10 19:41:18,886 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 15:42:05] 2026-03-10 19:41:18,886 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 15:42:05] 2026-03-10 19:41:18,886 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 15:42:05] 2026-03-10 19:41:18,886 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 15:42:05] 2026-03-10 19:41:18,972 | INFO     | fitting pss+swap vs Time
[2026-03-10 15:42:05] 2026-03-10 19:41:18,973 | INFO     | sum of square deviations: 12187920959.17649
[2026-03-10 15:42:05] 2026-03-10 19:41:19,016 | INFO     | sum of deviations: 83101824925.3529
[2026-03-10 15:42:05] 2026-03-10 19:41:19,017 | INFO     | mean x: 1773161291.235294
[2026-03-10 15:42:05] 2026-03-10 19:41:19,017 | INFO     | mean y: 2477514.370588235
[2026-03-10 15:42:05] 2026-03-10 19:41:19,017 | INFO     | intersect: -12087602465.816975
[2026-03-10 15:42:05] 2026-03-10 19:41:19,018 | INFO     | chi2: 4.760413072804309
[2026-03-10 15:42:05] 2026-03-10 19:41:19,059 | INFO     | sum of square deviations: 11658141386.406017
[2026-03-10 15:42:05] 2026-03-10 19:41:19,102 | INFO     | sum of deviations: 124582869241.99994
[2026-03-10 15:42:05] 2026-03-10 19:41:19,102 | INFO     | mean x: 1773161138.7402985
[2026-03-10 15:42:05] 2026-03-10 19:41:19,102 | INFO     | mean y: 2489345.0
[2026-03-10 15:42:05] 2026-03-10 19:41:19,102 | INFO     | intersect: -18946114465.060608
[2026-03-10 15:42:05] 2026-03-10 19:41:19,103 | INFO     | chi2: 3.3939052181866374
[2026-03-10 15:42:05] 2026-03-10 19:41:19,103 | INFO     | current chi2=3.3939052181866374 (change=28.705657129301937 %)
[2026-03-10 15:42:05] 2026-03-10 19:41:19,104 | INFO     | sum of square deviations: 11143922944.606052
[2026-03-10 15:42:05] 2026-03-10 19:41:19,147 | INFO     | sum of deviations: 122664527157.87871
[2026-03-10 15:42:05] 2026-03-10 19:41:19,147 | INFO     | mean x: 1773160986.2424242
[2026-03-10 15:42:05] 2026-03-10 19:41:19,148 | INFO     | mean y: 2488776.0515151517
[2026-03-10 15:42:05] 2026-03-10 19:41:19,148 | INFO     | intersect: -19515229987.205227
[2026-03-10 15:42:05] 2026-03-10 19:41:19,184 | INFO     | chi2: 3.3949798692524378
[2026-03-10 15:42:05] 2026-03-10 19:41:19,184 | INFO     | current chi2=3.3949798692524378 (change=-0.031664144892490205 %)
[2026-03-10 15:42:05] 2026-03-10 19:41:19,184 | INFO     | right removable region: 329
[2026-03-10 15:42:05] 2026-03-10 19:41:19,185 | INFO     | sum of square deviations: 11658030121.432863
[2026-03-10 15:42:05] 2026-03-10 19:41:19,226 | INFO     | sum of deviations: -13975694872.731335
[2026-03-10 15:42:05] 2026-03-10 19:41:19,227 | INFO     | mean x: 1773161443.7462687
[2026-03-10 15:42:05] 2026-03-10 19:41:19,227 | INFO     | mean y: 2505411.814925373
[2026-03-10 15:42:05] 2026-03-10 19:41:19,227 | INFO     | intersect: 2128178706.5107725
[2026-03-10 15:42:05] 2026-03-10 19:41:19,228 | INFO     | chi2: 1.7213332056374167
[2026-03-10 15:42:05] 2026-03-10 19:41:19,228 | INFO     | current chi2=1.7213332056374167 (change=63.84067560289684 %)
[2026-03-10 15:42:05] 2026-03-10 19:41:19,263 | INFO     | sum of square deviations: 11143823390.60605
[2026-03-10 15:42:05] 2026-03-10 19:41:19,308 | INFO     | sum of deviations: -38662590384.21212
[2026-03-10 15:42:05] 2026-03-10 19:41:19,308 | INFO     | mean x: 1773161596.2424242
[2026-03-10 15:42:05] 2026-03-10 19:41:19,309 | INFO     | mean y: 2512705.515151515
[2026-03-10 15:42:05] 2026-03-10 19:41:19,309 | INFO     | intersect: 6154352884.382904
[2026-03-10 15:42:05] 2026-03-10 19:41:19,309 | INFO     | chi2: 1.4681428347830279
[2026-03-10 15:42:05] 2026-03-10 19:41:19,309 | INFO     | current chi2=1.4681428347830279 (change=14.70896918883473 %)
[2026-03-10 15:42:05] 2026-03-10 19:41:19,310 | INFO     | left removable region: 20
[2026-03-10 15:42:05] 2026-03-10 19:41:19,310 | INFO     | sum of square deviations: 9149004219.307446
[2026-03-10 15:42:05] 2026-03-10 19:41:19,354 | INFO     | sum of deviations: 4835080912.304207
[2026-03-10 15:42:05] 2026-03-10 19:41:19,354 | INFO     | mean x: 1773161565.7540452
[2026-03-10 15:42:05] 2026-03-10 19:41:19,355 | INFO     | mean y: 2524802.556634304
[2026-03-10 15:42:05] 2026-03-10 19:41:19,355 | INFO     | intersect: -934558560.3427006
[2026-03-10 15:42:05] 2026-03-10 19:41:19,355 | INFO     | chi2: 0.008213399737676843
[2026-03-10 15:42:05] 2026-03-10 19:41:19,356 | INFO     | current memory leak: 0.53 B/s (using 309 data points, chi2=0.01)
[2026-03-10 15:42:05] 2026-03-10 19:41:19,444 | INFO     | time since job start (20823s) is within the limit (349056.0s)
[2026-03-10 15:42:05] 2026-03-10 19:41:19,454 | INFO     | could have reported an average CPU frequency of 2760 MHz (15 samples)
[2026-03-10 15:42:05] 2026-03-10 19:41:19,455 | INFO     | ..............................
[2026-03-10 15:42:05] 2026-03-10 19:41:19,455 | INFO     | . Timing measurements:
[2026-03-10 15:42:05] 2026-03-10 19:41:19,455 | INFO     | . get job = 0 s
[2026-03-10 15:42:05] 2026-03-10 19:41:19,455 | INFO     | . initial setup = 45 s
[2026-03-10 15:42:05] 2026-03-10 19:41:19,455 | INFO     | . payload setup = 51 s
[2026-03-10 15:42:05] 2026-03-10 19:41:19,455 | INFO     | . stage-in = 1 s
[2026-03-10 15:42:05] 2026-03-10 19:41:19,455 | INFO     | . payload execution = 20747 s
[2026-03-10 15:42:05] 2026-03-10 19:41:19,456 | INFO     | . stage-out = 8 s
[2026-03-10 15:42:05] 2026-03-10 19:41:19,456 | INFO     | . log creation = 0 s
[2026-03-10 15:42:05] 2026-03-10 19:41:19,456 | INFO     | ..............................
[2026-03-10 15:42:05] 2026-03-10 19:41:20,461 | INFO     | 
[2026-03-10 15:42:05] 2026-03-10 19:41:20,462 | INFO     | job summary report
[2026-03-10 15:42:05] 2026-03-10 19:41:20,462 | INFO     | --------------------------------------------------
[2026-03-10 15:42:05] 2026-03-10 19:41:20,462 | INFO     | PanDA job id: 7042039316
[2026-03-10 15:42:05] 2026-03-10 19:41:20,462 | INFO     | task id: 48955010
[2026-03-10 15:42:05] 2026-03-10 19:41:20,462 | INFO     | errors: (none)
[2026-03-10 15:42:05] 2026-03-10 19:41:20,462 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 15:42:05] 2026-03-10 19:41:20,478 | INFO     | pilot state: finished 
[2026-03-10 15:42:05] 2026-03-10 19:41:20,478 | INFO     | transexitcode: 0
[2026-03-10 15:42:05] 2026-03-10 19:41:20,478 | INFO     | exeerrorcode: 0
[2026-03-10 15:42:05] 2026-03-10 19:41:20,478 | INFO     | exeerrordiag: 
[2026-03-10 15:42:05] 2026-03-10 19:41:20,478 | INFO     | exitcode: 0
[2026-03-10 15:42:05] 2026-03-10 19:41:20,478 | INFO     | exitmsg: OK
[2026-03-10 15:42:05] 2026-03-10 19:41:20,478 | INFO     | cpuconsumptiontime: 48995 s
[2026-03-10 15:42:05] 2026-03-10 19:41:20,478 | INFO     | nevents: 400
[2026-03-10 15:42:05] 2026-03-10 19:41:20,479 | INFO     | neventsw: 0
[2026-03-10 15:42:05] 2026-03-10 19:41:20,608 | INFO     | pid: 3847113
[2026-03-10 15:42:05] 2026-03-10 19:41:20,609 | INFO     | pgrp: 3847113
[2026-03-10 15:42:05] 2026-03-10 19:41:20,609 | INFO     | corecount: 8
[2026-03-10 15:42:05] 2026-03-10 19:41:20,609 | INFO     | event service: False
[2026-03-10 15:42:05] 2026-03-10 19:41:20,609 | INFO     | sizes: {0: 2279089, 1: 2279690, 2: 2279774, 3: 2279802, 4: 2279830, 5: 2279830, 7: 2280475, 20803: 2313936, 20805: 2313935, 20815: 2323045, 20817: 2323183}
[2026-03-10 15:42:05] 2026-03-10 19:41:20,609 | INFO     | --------------------------------------------------
[2026-03-10 15:42:05] 2026-03-10 19:41:20,609 | INFO     | 
[2026-03-10 15:42:05] 2026-03-10 19:41:20,609 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-10 15:42:05] 2026-03-10 19:41:20,760 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 15:42:05] 2026-03-10 19:41:20,760 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 15:42:05] 2026-03-10 19:41:20,760 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 15:42:05] 2026-03-10 19:41:20,760 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 15:42:05] 2026-03-10 19:41:20,761 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 15:42:05] 2026-03-10 19:41:20,761 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 15:42:05] 2026-03-10 19:41:20,761 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 15:42:05] 2026-03-10 19:41:20,761 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 15:42:05] 2026-03-10 19:41:20,761 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 15:42:05] 2026-03-10 19:41:20,761 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 15:42:05] 2026-03-10 19:41:20,761 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 15:42:05] 2026-03-10 19:41:20,761 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 15:42:05] 2026-03-10 19:41:20,762 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 15:42:05] 2026-03-10 19:41:20,762 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 15:42:05] 2026-03-10 19:41:20,762 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 15:42:05] 2026-03-10 19:41:20,762 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 15:42:05] 2026-03-10 19:41:20,762 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 15:42:05] 2026-03-10 19:41:20,762 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 15:42:05] 2026-03-10 19:41:20,762 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 15:42:05] 2026-03-10 19:41:20,763 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 15:42:05] 2026-03-10 19:41:20,763 | INFO     | job 7042039316 has completed (purged errors)
[2026-03-10 15:42:05] 2026-03-10 19:41:20,763 | INFO     | overall cleanup function is called
[2026-03-10 15:42:05] 2026-03-10 19:41:22,096 | INFO     | --- collectZombieJob: --- 10, [3847113]
[2026-03-10 15:42:05] 2026-03-10 19:41:22,096 | INFO     | zombie collector waiting for pid 3847113
[2026-03-10 15:42:05] 2026-03-10 19:41:22,096 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 15:42:05] 2026-03-10 19:41:22,096 | INFO     | collected zombie processes
[2026-03-10 15:42:05] 2026-03-10 19:41:22,096 | INFO     | will attempt to kill all subprocesses of pid=3847113
[2026-03-10 15:42:05] 2026-03-10 19:41:23,584 | INFO     | PID=3840351 has CPU usage=13.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-10 15:42:05] 2026-03-10 19:41:23,589 | INFO     | .. there are 23 such processes running
[2026-03-10 15:42:05] 2026-03-10 19:41:23,747 | INFO     | process IDs to be killed: [3847113] (in reverse order)
[2026-03-10 15:42:05] 2026-03-10 19:41:28,259 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 15:42:05] 2026-03-10 19:41:28,260 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 15:42:05] 2026-03-10 19:41:28,290 | INFO     | did not find any defunct processes belonging to 3847113
[2026-03-10 15:42:05] 2026-03-10 19:41:28,319 | INFO     | did not find any defunct processes belonging to 3847113
[2026-03-10 15:42:05] 2026-03-10 19:41:28,320 | INFO     | ready for new job
[2026-03-10 15:42:05] 2026-03-10 19:41:28,320 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 15:42:05] 2026-03-10 19:41:28,327 | INFO     | **************************************
[2026-03-10 15:42:05] 2026-03-10 19:41:28,328 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 15:42:05] 2026-03-10 19:41:28,328 | INFO     | **************************************
[2026-03-10 15:42:05] 2026-03-10 19:41:28,329 | INFO     | 
[2026-03-10 15:42:05] 2026-03-10 19:41:28,336 | INFO     | architecture information:
[2026-03-10 15:42:05] 2026-03-10 19:41:28,341 | INFO     | executing command: cat /etc/os-release
[2026-03-10 15:42:05] 2026-03-10 19:41:28,391 | INFO     | cat /etc/os-release:
[2026-03-10 15:42:05] NAME="CentOS Linux"
[2026-03-10 15:42:05] VERSION="7 (Core)"
[2026-03-10 15:42:05] ID="centos"
[2026-03-10 15:42:05] ID_LIKE="rhel fedora"
[2026-03-10 15:42:05] VERSION_ID="7"
[2026-03-10 15:42:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 15:42:05] ANSI_COLOR="0;31"
[2026-03-10 15:42:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 15:42:05] HOME_URL="https://www.centos.org/"
[2026-03-10 15:42:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 15:42:05] 
[2026-03-10 15:42:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 15:42:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 15:42:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 15:42:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 15:42:05] 
[2026-03-10 15:42:05] 2026-03-10 19:41:28,391 | INFO     | **************************************
[2026-03-10 15:42:05] 2026-03-10 19:41:28,894 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-10 15:42:05] 2026-03-10 19:41:28,985 | INFO     | sufficient remaining disk space (61702406144 B)
[2026-03-10 15:42:05] 2026-03-10 19:41:28,985 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 15:42:05] 2026-03-10 19:41:28,986 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 15:42:05] 2026-03-10 19:41:28,986 | INFO     | update_server=False
[2026-03-10 15:42:05] 2026-03-10 19:41:28,986 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 15:42:05] 2026-03-10 19:41:28,986 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 15:42:05] 2026-03-10 19:41:28,986 | INFO     | aborting loop
[2026-03-10 15:42:05] 2026-03-10 19:41:29,061 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 15:42:05] 2026-03-10 19:41:29,542 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 15:42:05] 2026-03-10 19:41:29,570 | INFO     | all payload control threads have been joined
[2026-03-10 15:42:05] 2026-03-10 19:41:29,729 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 15:42:05] 2026-03-10 19:41:29,931 | INFO     | all data control threads have been joined
[2026-03-10 15:42:05] 2026-03-10 19:41:29,992 | INFO     | [job] retrieve thread has finished
[2026-03-10 15:42:05] 2026-03-10 19:41:29,999 | INFO     | [job] job monitor thread has finished
[2026-03-10 15:42:05] 2026-03-10 19:41:30,012 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 15:42:05] 2026-03-10 19:41:30,073 | INFO     | all job control threads have been joined
[2026-03-10 15:42:05] 2026-03-10 19:41:30,314 | INFO     | [data] copytool_in thread has finished
[2026-03-10 15:42:05] 2026-03-10 19:41:30,357 | INFO     | [payload] validate_post thread has finished
[2026-03-10 15:42:05] 2026-03-10 19:41:30,476 | INFO     | [payload] failed_post thread has finished
[2026-03-10 15:42:05] 2026-03-10 19:41:30,549 | INFO     | [job] queue monitor thread has finished
[2026-03-10 15:42:05] 2026-03-10 19:41:30,576 | INFO     | [payload] control thread has finished
[2026-03-10 15:42:05] 2026-03-10 19:41:30,702 | INFO     | [job] validate thread has finished
[2026-03-10 15:42:05] 2026-03-10 19:41:30,785 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 15:42:05] 2026-03-10 19:41:30,794 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 15:42:05] 2026-03-10 19:41:30,817 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 15:42:05] 2026-03-10 19:41:30,937 | INFO     | [data] control thread has finished
[2026-03-10 15:42:05] 2026-03-10 19:41:31,068 | INFO     | [data] copytool_out thread has finished
[2026-03-10 15:42:05] 2026-03-10 19:41:31,116 | INFO     | [job] control thread has finished
[2026-03-10 15:42:05] 2026-03-10 19:41:33,759 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 15:42:05] 2026-03-10 19:41:55,786 | INFO     | [monitor] cgroup control has ended
[2026-03-10 15:42:05] 2026-03-10 19:41:56,838 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140588659787584)>', '<ExcThread(monitor, started 140588305348352)>']
[2026-03-10 15:42:05] 2026-03-10 19:41:58,902 | INFO     | PID=3840351 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 15:42:05] 2026-03-10 19:41:58,972 | INFO     | .. there are 23 such processes running
[2026-03-10 15:42:05] 2026-03-10 19:41:58,972 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 15:42:05] 2026-03-10 19:41:58,972 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 15:42:05] 2026-03-10 19:41:58,972 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 15:42:05] 2026-03-10 19:41:58,972 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 15:42:05] 2026-03-10 19:41:58,973 | INFO     | [monitor] control thread has ended
[2026-03-10 15:42:05] 2026-03-10 19:42:01,971 | INFO     | all workflow threads have been joined
[2026-03-10 15:42:05] 2026-03-10 19:42:01,972 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 15:42:05] 2026-03-10 19:42:01,972 | INFO     | traces error code: 0
[2026-03-10 15:42:05] 2026-03-10 19:42:01,972 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 15:42:05] 2026-03-10 19:42:03,534 [wrapper] ==== pilot stdout END ====
[2026-03-10 15:42:05] 2026-03-10 19:42:03,537 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 15:42:05] 2026-03-10 19:42:03,540 [wrapper] pilotpid: 3840351
[2026-03-10 15:42:05] 2026-03-10 19:42:03,543 [wrapper] Pilot exit status: 0
[2026-03-10 15:42:05] 2026-03-10 19:42:03,642 [wrapper] pandaids: 7042039316
[2026-03-10 15:42:05] 2026-03-10 19:42:04,004 [wrapper] cleanup supervisor_pilot  530681 3840352
[2026-03-10 15:42:05] 2026-03-10 19:42:04,010 [wrapper] Test setup, not cleaning
[2026-03-10 15:42:05] 2026-03-10 19:42:04,013 [wrapper] apfmon messages muted
[2026-03-10 15:42:05] 2026-03-10 19:42:04,017 [wrapper] ==== wrapper stdout END ====
[2026-03-10 15:42:05] 2026-03-10 19:42:04,020 [wrapper] ==== wrapper stderr END ====
[2026-03-10 15:42:05]  *** Error codes and diagnostics ***
[2026-03-10 15:42:05]     "exeErrorCode": 0,
[2026-03-10 15:42:05]     "exeErrorDiag": "",
[2026-03-10 15:42:05]     "pilotErrorCode": 0,
[2026-03-10 15:42:05]     "pilotErrorDiag": "",
[2026-03-10 15:42:05]  *** Listing of results directory ***
[2026-03-10 15:42:05] total 617952
[2026-03-10 15:42:05] -rw-r--r--. 1 boincer umatlas    584627 Mar 10 00:09 pilot3.tar.gz
[2026-03-10 15:42:05] -rwx------. 1 boincer umatlas     36322 Mar 10 00:11 runpilot2-wrapper.sh
[2026-03-10 15:42:05] -rw-r--r--. 1 boincer umatlas      5111 Mar 10 00:11 queuedata.json
[2026-03-10 15:42:05] -rw-r--r--. 1 boincer umatlas       100 Mar 10 09:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 15:42:05] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 10 09:51 run_atlas
[2026-03-10 15:42:05] -rw-r--r--. 1 boincer umatlas       105 Mar 10 09:51 job.xml
[2026-03-10 15:42:05] -rw-r--r--. 2 boincer umatlas 439209490 Mar 10 09:51 EVNT.46701403._001448.pool.root.1
[2026-03-10 15:42:05] -rw-r--r--. 2 boincer umatlas     15845 Mar 10 09:51 start_atlas.sh
[2026-03-10 15:42:05] drwxrwx--x. 2 boincer umatlas      4096 Mar 10 09:51 shared
[2026-03-10 15:42:05] -rw-r--r--. 2 boincer umatlas    597956 Mar 10 09:51 input.tar.gz
[2026-03-10 15:42:05] -rw-r--r--. 1 boincer umatlas         0 Mar 10 09:51 boinc_lockfile
[2026-03-10 15:42:05] -rw-r--r--. 1 boincer umatlas      2563 Mar 10 09:52 pandaJob.out
[2026-03-10 15:42:05] -rw-------. 1 boincer umatlas        57 Mar 10 09:52 setup.sh.local
[2026-03-10 15:42:05] -rw-------. 1 boincer umatlas   1006729 Mar 10 09:53 agis_schedconf.cvmfs.json
[2026-03-10 15:42:05] -rw-------. 1 boincer umatlas       440 Mar 10 09:54 workernode_map.json
[2026-03-10 15:42:05] drwx------. 5 boincer umatlas      4096 Mar 10 09:54 pilot3
[2026-03-10 15:42:05] -rw-r--r--. 1 boincer umatlas      6612 Mar 10 15:37 init_data.xml
[2026-03-10 15:42:05] -rw-------. 1 boincer umatlas 183608326 Mar 10 15:38 HITS.48955010._022564.pool.root.1
[2026-03-10 15:42:05] -rw-r--r--. 1 boincer umatlas       531 Mar 10 15:39 boinc_task_state.xml
[2026-03-10 15:42:05] -rw-------. 1 boincer umatlas      1044 Mar 10 15:41 memory_monitor_summary.json
[2026-03-10 15:42:05] -rw-------. 1 boincer umatlas   1511578 Mar 10 15:41 agis_ddmendpoints.agis.ALL.json
[2026-03-10 15:42:05] -rw-------. 1 boincer umatlas    556913 Mar 10 15:41 log.48955010._022564.job.log.tgz.1
[2026-03-10 15:42:05] -rw-------. 1 boincer umatlas        95 Mar 10 15:41 pilot_heartbeat.json
[2026-03-10 15:42:05] -rw-------. 1 boincer umatlas      6393 Mar 10 15:41 heartbeat.json
[2026-03-10 15:42:05] -rw-r--r--. 1 boincer umatlas      8192 Mar 10 15:41 boinc_mmap_file
[2026-03-10 15:42:05] -rw-r--r--. 1 boincer umatlas        28 Mar 10 15:41 wrapper_checkpoint.txt
[2026-03-10 15:42:05] -rw-------. 1 boincer umatlas      4820 Mar 10 15:42 pilotlog.txt
[2026-03-10 15:42:05] -rw-------. 1 boincer umatlas   2457147 Mar 10 15:42 log.48955010._022564.job.log.1
[2026-03-10 15:42:05] -rw-------. 1 boincer umatlas       357 Mar 10 15:42 output.list
[2026-03-10 15:42:05] -rw-r--r--. 1 boincer umatlas       620 Mar 10 15:42 runtime_log
[2026-03-10 15:42:05] -rw-------. 1 boincer umatlas   3031040 Mar 10 15:42 result.tar.gz
[2026-03-10 15:42:05] -rw-------. 1 boincer umatlas       655 Mar 10 15:42 xBZMDmOc3J9n9Rq4apOajLDm4fhM0noT9bVooX4SDmuHcLDmHufTen.diag
[2026-03-10 15:42:05] -rw-r--r--. 1 boincer umatlas      9337 Mar 10 15:42 runtime_log.err
[2026-03-10 15:42:05] -rw-r--r--. 1 boincer umatlas     21286 Mar 10 15:42 stderr.txt
[2026-03-10 15:42:05] HITS file was successfully produced:
[2026-03-10 15:42:05] -rw-------. 1 boincer umatlas 183608326 Mar 10 15:38 shared/HITS.pool.root.1
[2026-03-10 15:42:05]  *** Contents of shared directory: ***
[2026-03-10 15:42:05] total 611792
[2026-03-10 15:42:05] -rw-r--r--. 2 boincer umatlas 439209490 Mar 10 09:51 ATLAS.root_0
[2026-03-10 15:42:05] -rw-r--r--. 2 boincer umatlas     15845 Mar 10 09:51 start_atlas.sh
[2026-03-10 15:42:05] -rw-r--r--. 2 boincer umatlas    597956 Mar 10 09:51 input.tar.gz
[2026-03-10 15:42:05] -rw-------. 1 boincer umatlas 183608326 Mar 10 15:38 HITS.pool.root.1
[2026-03-10 15:42:05] -rw-------. 1 boincer umatlas   3031040 Mar 10 15:42 result.tar.gz
15:42:06 (3835282): run_atlas exited; CPU time 49839.586640
15:42:06 (3835282): called boinc_finish(0)

</stderr_txt>
]]>

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