Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:36:10 (1225413): wrapper (7.7.26015): starting
13:36:10 (1225413): wrapper: running run_atlas (--nthreads 4)
[2026-03-15 13:36:10] Arguments: --nthreads 4
[2026-03-15 13:36:10] Threads: 4
[2026-03-15 13:36:10] Checking for CVMFS
[2026-03-15 13:36:10] No cvmfs_config command found, will try listing directly
[2026-03-15 13:36:10] CVMFS is ok
[2026-03-15 13:36:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 13:36:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 13:36:10] Further information can be found at the LHC@home message board.
[2026-03-15 13:36:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 13:36:10] Checking for apptainer binary...
[2026-03-15 13:36:10] which: no apptainer in ((null))
[2026-03-15 13:36:10] apptainer is not installed, using version from CVMFS
[2026-03-15 13:36:10] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 13:36:10] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot64/slots/14/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-03-15 13:36:10] apptainer works
[2026-03-15 13:36:10] Set ATHENA_PROC_NUMBER=4
[2026-03-15 13:36:10] Set ATHENA_CORE_NUMBER=4
[2026-03-15 13:36:11] Starting ATLAS job with PandaID=7042062813
[2026-03-15 13:36:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot64/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 14:54:36]  *** The last 200 lines of the pilot log: ***
[2026-03-15 14:54:36]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-15 14:54:36]  is_altstaged=None
[2026-03-15 14:54:36]  is_tar=False
[2026-03-15 14:54:36]  lfn=log.48955006._039500.job.log.tgz.1
[2026-03-15 14:54:36]  mtime=0
[2026-03-15 14:54:36]  protocol_id=None
[2026-03-15 14:54:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-15 14:54:36]  replicas=None
[2026-03-15 14:54:36]  scope=mc23_13p6TeV
[2026-03-15 14:54:36]  status=None
[2026-03-15 14:54:36]  status_code=0
[2026-03-15 14:54:36]  storage_token=
[2026-03-15 14:54:36]  surl=/var/lib/boinc/var/slot64/slots/14/PanDA_Pilot-7042062813/log.48955006._039500.job.log.tgz.1
[2026-03-15 14:54:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c7/b7/log.48955006._039500.job.log.tgz.1
[2026-03-15 14:54:36]  workdir=None
[2026-03-15 14:54:36] ]
[2026-03-15 14:54:36] 2026-03-15 13:53:47,452 | INFO     | transferring file log.48955006._039500.job.log.tgz.1 from /var/lib/boinc/var/slot64/slots/14/PanDA_Pilot-7042062813/log.48955006._039500.job.log.tgz.1 to /var/lib/
[2026-03-15 14:54:36] 2026-03-15 13:53:47,452 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot64/slots/14/PanDA_Pilot-7042062813/log.48955006._039500.job.log.tgz.1 /var/lib/boinc/var/slot64/slots/14/
[2026-03-15 14:54:36] 2026-03-15 13:53:47,466 | INFO     | adding to output.list: log.48955006._039500.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c7/b7/log.48955006._039500.job.log.tg
[2026-03-15 14:54:36] 2026-03-15 13:53:47,467 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-15 14:54:36] 2026-03-15 13:53:47,467 | INFO     | summary of transferred files:
[2026-03-15 14:54:36] 2026-03-15 13:53:47,467 | INFO     |  -- lfn=log.48955006._039500.job.log.tgz.1, status_code=0, status=transferred
[2026-03-15 14:54:36] 2026-03-15 13:53:47,467 | INFO     | stage-out finished correctly
[2026-03-15 14:54:36] 2026-03-15 13:53:48,242 | INFO     | monitor loop #337: job 0:7042062813 is in state 'finished'
[2026-03-15 14:54:36] 2026-03-15 13:53:48,243 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-15 14:54:36] 2026-03-15 13:53:49,159 | INFO     | time since job start (4646s) is within the limit (349056.0s)
[2026-03-15 14:54:36] 2026-03-15 13:53:50,531 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-15 14:54:36] 2026-03-15 13:53:50,580 | INFO     | job 7042062813 has state=finished
[2026-03-15 14:54:36] 2026-03-15 13:53:50,580 | INFO     | preparing for final server update for job 7042062813 in state='finished'
[2026-03-15 14:54:36] 2026-03-15 13:53:50,580 | INFO     | reading metadata from: /var/lib/boinc/var/slot64/slots/14/PanDA_Pilot-7042062813/jobReport.json
[2026-03-15 14:54:36] 2026-03-15 13:53:50,582 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot64/slots/14/workernode_map.json
[2026-03-15 14:54:36] 2026-03-15 13:53:50,582 | INFO     | this job has now completed (state=finished)
[2026-03-15 14:54:36] 2026-03-15 13:53:50,582 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 14:54:36] 2026-03-15 13:53:50,582 | INFO     | log transfer has been attempted: DONE
[2026-03-15 14:54:36] 2026-03-15 13:53:50,582 | INFO     | job 7042062813 has finished - writing final server update
[2026-03-15 14:54:36] 2026-03-15 13:53:50,582 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_807370/.job.ad'
[2026-03-15 14:54:36] 2026-03-15 13:53:50,583 | INFO     | total number of processed events: 400 (read)
[2026-03-15 14:54:36] 2026-03-15 13:53:50,599 | INFO     | using path: /var/lib/boinc/var/slot64/slots/14/PanDA_Pilot-7042062813/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 14:54:36] 2026-03-15 13:53:50,599 | INFO     | extracted standard info from prmon json
[2026-03-15 14:54:36] 2026-03-15 13:53:50,599 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 14:54:36] 2026-03-15 13:53:50,599 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 14:54:36] 2026-03-15 13:53:50,600 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 14:54:36] 2026-03-15 13:53:50,600 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 14:54:36] 2026-03-15 13:53:50,601 | INFO     | fitting pss+swap vs Time
[2026-03-15 14:54:36] 2026-03-15 13:53:50,601 | INFO     | sum of square deviations: 101843770.0
[2026-03-15 14:54:36] 2026-03-15 13:53:50,601 | INFO     | sum of deviations: -264927758.00000003
[2026-03-15 14:54:36] 2026-03-15 13:53:50,601 | INFO     | mean x: 1773580583.0
[2026-03-15 14:54:36] 2026-03-15 13:53:50,601 | INFO     | mean y: 2332563.1739130435
[2026-03-15 14:54:36] 2026-03-15 13:53:50,601 | INFO     | intersect: 4615974885.001973
[2026-03-15 14:54:36] 2026-03-15 13:53:50,601 | INFO     | chi2: 0.00017972576198033147
[2026-03-15 14:54:36] 2026-03-15 13:53:50,601 | INFO     | current memory leak: -2.60 B/s (using 69 data points, chi2=0.00)
[2026-03-15 14:54:36] 2026-03-15 13:53:50,601 | INFO     | could have reported an average CPU frequency of 3590 MHz (6 samples)
[2026-03-15 14:54:36] 2026-03-15 13:53:50,601 | INFO     | ..............................
[2026-03-15 14:54:36] 2026-03-15 13:53:50,601 | INFO     | . Timing measurements:
[2026-03-15 14:54:36] 2026-03-15 13:53:50,601 | INFO     | . get job = 0 s
[2026-03-15 14:54:36] 2026-03-15 13:53:50,601 | INFO     | . initial setup = 5 s
[2026-03-15 14:54:36] 2026-03-15 13:53:50,601 | INFO     | . payload setup = 5 s
[2026-03-15 14:54:36] 2026-03-15 13:53:50,601 | INFO     | . stage-in = 0 s
[2026-03-15 14:54:36] 2026-03-15 13:53:50,601 | INFO     | . payload execution = 4623 s
[2026-03-15 14:54:36] 2026-03-15 13:53:50,601 | INFO     | . stage-out = 0 s
[2026-03-15 14:54:36] 2026-03-15 13:53:50,601 | INFO     | . log creation = 0 s
[2026-03-15 14:54:36] 2026-03-15 13:53:50,601 | INFO     | ..............................
[2026-03-15 14:54:36] 2026-03-15 13:53:50,635 | INFO     | 
[2026-03-15 14:54:36] 2026-03-15 13:53:50,635 | INFO     | job summary report
[2026-03-15 14:54:36] 2026-03-15 13:53:50,635 | INFO     | --------------------------------------------------
[2026-03-15 14:54:36] 2026-03-15 13:53:50,635 | INFO     | PanDA job id: 7042062813
[2026-03-15 14:54:36] 2026-03-15 13:53:50,635 | INFO     | task id: 48955006
[2026-03-15 14:54:36] 2026-03-15 13:53:50,635 | INFO     | errors: (none)
[2026-03-15 14:54:36] 2026-03-15 13:53:50,635 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 14:54:36] 2026-03-15 13:53:50,635 | INFO     | pilot state: finished 
[2026-03-15 14:54:36] 2026-03-15 13:53:50,635 | INFO     | transexitcode: 0
[2026-03-15 14:54:36] 2026-03-15 13:53:50,635 | INFO     | exeerrorcode: 0
[2026-03-15 14:54:36] 2026-03-15 13:53:50,635 | INFO     | exeerrordiag: 
[2026-03-15 14:54:36] 2026-03-15 13:53:50,635 | INFO     | exitcode: 0
[2026-03-15 14:54:36] 2026-03-15 13:53:50,635 | INFO     | exitmsg: OK
[2026-03-15 14:54:36] 2026-03-15 13:53:50,635 | INFO     | cpuconsumptiontime: 17734 s
[2026-03-15 14:54:36] 2026-03-15 13:53:50,635 | INFO     | nevents: 400
[2026-03-15 14:54:36] 2026-03-15 13:53:50,635 | INFO     | neventsw: 0
[2026-03-15 14:54:36] 2026-03-15 13:53:50,635 | INFO     | pid: 1245787
[2026-03-15 14:54:36] 2026-03-15 13:53:50,635 | INFO     | pgrp: 1245787
[2026-03-15 14:54:36] 2026-03-15 13:53:50,635 | INFO     | corecount: 4
[2026-03-15 14:54:36] 2026-03-15 13:53:50,635 | INFO     | event service: False
[2026-03-15 14:54:36] 2026-03-15 13:53:50,635 | INFO     | sizes: {0: 2279809, 1: 2280270, 11: 2280270, 4632: 2306501, 4633: 2315578, 4636: 2315900}
[2026-03-15 14:54:36] 2026-03-15 13:53:50,635 | INFO     | --------------------------------------------------
[2026-03-15 14:54:36] 2026-03-15 13:53:50,635 | INFO     | 
[2026-03-15 14:54:36] 2026-03-15 13:53:50,636 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot64/slots/14
[2026-03-15 14:54:36] 2026-03-15 13:53:50,656 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 14:54:36] 2026-03-15 13:53:50,656 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 14:54:36] 2026-03-15 13:53:50,656 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 14:54:36] 2026-03-15 13:53:50,656 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 14:54:36] 2026-03-15 13:53:50,656 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 14:54:36] 2026-03-15 13:53:50,657 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 14:54:36] 2026-03-15 13:53:50,657 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 14:54:36] 2026-03-15 13:53:50,657 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 14:54:36] 2026-03-15 13:53:50,657 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 14:54:36] 2026-03-15 13:53:50,657 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 14:54:36] 2026-03-15 13:53:50,657 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 14:54:36] 2026-03-15 13:53:50,657 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 14:54:36] 2026-03-15 13:53:50,657 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 14:54:36] 2026-03-15 13:53:50,657 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 14:54:36] 2026-03-15 13:53:50,657 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 14:54:36] 2026-03-15 13:53:50,657 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 14:54:36] 2026-03-15 13:53:50,657 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 14:54:36] 2026-03-15 13:53:50,657 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 14:54:36] 2026-03-15 13:53:50,657 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 14:54:36] 2026-03-15 13:53:50,657 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 14:54:36] 2026-03-15 13:53:50,657 | INFO     | job 7042062813 has completed (purged errors)
[2026-03-15 14:54:36] 2026-03-15 13:53:50,657 | INFO     | overall cleanup function is called
[2026-03-15 14:54:36] 2026-03-15 13:53:51,664 | INFO     | --- collectZombieJob: --- 10, [1245787]
[2026-03-15 14:54:36] 2026-03-15 13:53:51,665 | INFO     | zombie collector waiting for pid 1245787
[2026-03-15 14:54:36] 2026-03-15 13:53:51,665 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 14:54:36] 2026-03-15 13:53:51,665 | INFO     | collected zombie processes
[2026-03-15 14:54:36] 2026-03-15 13:53:51,665 | INFO     | will attempt to kill all subprocesses of pid=1245787
[2026-03-15 14:54:36] 2026-03-15 13:53:52,127 | INFO     | process IDs to be killed: [1245787] (in reverse order)
[2026-03-15 14:54:36] 2026-03-15 13:53:52,342 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 14:54:36] 2026-03-15 13:53:52,342 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 14:54:36] 2026-03-15 13:53:52,372 | INFO     | did not find any defunct processes belonging to 1245787
[2026-03-15 14:54:36] 2026-03-15 13:53:52,401 | INFO     | did not find any defunct processes belonging to 1245787
[2026-03-15 14:54:36] 2026-03-15 13:53:52,401 | INFO     | ready for new job
[2026-03-15 14:54:36] 2026-03-15 13:53:52,401 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 14:54:36] 2026-03-15 13:53:52,403 | INFO     | **************************************
[2026-03-15 14:54:36] 2026-03-15 13:53:52,403 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-15 14:54:36] 2026-03-15 13:53:52,403 | INFO     | **************************************
[2026-03-15 14:54:36] 2026-03-15 13:53:52,403 | INFO     | 
[2026-03-15 14:54:36] 2026-03-15 13:53:52,409 | INFO     | architecture information:
[2026-03-15 14:54:36] 2026-03-15 13:53:52,409 | INFO     | executing command: cat /etc/os-release
[2026-03-15 14:54:36] 2026-03-15 13:53:52,423 | INFO     | cat /etc/os-release:
[2026-03-15 14:54:36] NAME="CentOS Linux"
[2026-03-15 14:54:36] VERSION="7 (Core)"
[2026-03-15 14:54:36] ID="centos"
[2026-03-15 14:54:36] ID_LIKE="rhel fedora"
[2026-03-15 14:54:36] VERSION_ID="7"
[2026-03-15 14:54:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 14:54:36] ANSI_COLOR="0;31"
[2026-03-15 14:54:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 14:54:36] HOME_URL="https://www.centos.org/"
[2026-03-15 14:54:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 14:54:36] 
[2026-03-15 14:54:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 14:54:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 14:54:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 14:54:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 14:54:36] 
[2026-03-15 14:54:36] 2026-03-15 13:53:52,423 | INFO     | **************************************
[2026-03-15 14:54:36] 2026-03-15 13:53:52,928 | INFO     | executing command: df -mP /var/lib/boinc/var/slot64/slots/14
[2026-03-15 14:54:36] 2026-03-15 13:53:52,943 | INFO     | sufficient remaining disk space (127918931968 B)
[2026-03-15 14:54:36] 2026-03-15 13:53:52,943 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 14:54:36] 2026-03-15 13:53:52,944 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 14:54:36] 2026-03-15 13:53:52,944 | INFO     | update_server=False
[2026-03-15 14:54:36] 2026-03-15 13:53:52,944 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 14:54:36] 2026-03-15 13:53:52,946 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 14:54:36] 2026-03-15 13:53:53,022 | INFO     | all data control threads have been joined
[2026-03-15 14:54:36] 2026-03-15 13:53:53,028 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 14:54:36] 2026-03-15 13:53:53,099 | INFO     | all payload control threads have been joined
[2026-03-15 14:54:36] 2026-03-15 13:53:53,252 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-15 14:54:36] 2026-03-15 13:53:53,253 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-15 14:54:36] 2026-03-15 13:53:53,253 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 14:54:36] 2026-03-15 13:53:53,253 | INFO     | will abort loop
[2026-03-15 14:54:36] 2026-03-15 13:53:53,949 | INFO     | [job] retrieve thread has finished
[2026-03-15 14:54:36] 2026-03-15 13:53:54,028 | INFO     | [data] control thread has finished
[2026-03-15 14:54:36] 2026-03-15 13:53:54,105 | INFO     | [payload] control thread has finished
[2026-03-15 14:54:36] 2026-03-15 13:53:54,203 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 14:54:36] 2026-03-15 13:53:54,257 | INFO     | [job] job monitor thread has finished
[2026-03-15 14:54:36] 2026-03-15 13:53:54,283 | INFO     | [payload] validate_post thread has finished
[2026-03-15 14:54:36] 2026-03-15 13:53:54,292 | INFO     | [job] validate thread has finished
[2026-03-15 14:54:36] 2026-03-15 13:53:54,533 | INFO     | all job control threads have been joined
[2026-03-15 14:54:36] 2026-03-15 13:53:54,639 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 14:54:36] 2026-03-15 13:53:54,649 | INFO     | [data] copytool_in thread has finished
[2026-03-15 14:54:36] 2026-03-15 13:53:54,672 | INFO     | [payload] failed_post thread has finished
[2026-03-15 14:54:36] 2026-03-15 13:53:55,033 | INFO     | [data] copytool_out thread has finished
[2026-03-15 14:54:36] 2026-03-15 13:53:55,376 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 14:54:36] 2026-03-15 13:53:55,538 | INFO     | [job] control thread has finished
[2026-03-15 14:54:36] 2026-03-15 13:53:55,644 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 14:54:36] 2026-03-15 13:53:56,649 | INFO     | [job] queue monitor thread has finished
[2026-03-15 14:54:36] 2026-03-15 13:53:56,952 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 14:54:36] 2026-03-15 13:54:03,517 | INFO     | job.realtimelogging is not enabled
[2026-03-15 14:54:36] 2026-03-15 13:54:04,523 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 14:54:36] 2026-03-15 13:54:22,793 | INFO     | PID=1231400 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 14:54:36] 2026-03-15 13:54:22,793 | INFO     | .. there are 45 such processes running
[2026-03-15 14:54:36] 2026-03-15 13:54:22,794 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 14:54:36] 2026-03-15 13:54:22,794 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 14:54:36] 2026-03-15 13:54:22,794 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 14:54:36] 2026-03-15 13:54:30,689 | INFO     | [monitor] cgroup control has ended
[2026-03-15 14:54:36] 2026-03-15 13:54:31,467 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22903420192576)>', '<ExcThread(monitor, started 22903108126464)>']
[2026-03-15 14:54:36] 2026-03-15 13:54:31,831 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 14:54:36] 2026-03-15 13:54:31,832 | INFO     | [monitor] control thread has ended
[2026-03-15 14:54:36] 2026-03-15 13:54:36,492 | INFO     | all workflow threads have been joined
[2026-03-15 14:54:36] 2026-03-15 13:54:36,493 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 14:54:36] 2026-03-15 13:54:36,493 | INFO     | traces error code: 0
[2026-03-15 14:54:36] 2026-03-15 13:54:36,493 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 14:54:36] 2026-03-15 13:54:36,706 [wrapper] ==== pilot stdout END ====
[2026-03-15 14:54:36] 2026-03-15 13:54:36,709 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 14:54:36] 2026-03-15 13:54:36,715 [wrapper] pilotpid: 1231400
[2026-03-15 14:54:36] 2026-03-15 13:54:36,718 [wrapper] Pilot exit status: 0
[2026-03-15 14:54:36] 2026-03-15 13:54:36,728 [wrapper] pandaids: 7042062813
[2026-03-15 14:54:36] 2026-03-15 13:54:36,856 [wrapper] cleanup supervisor_pilot 1947612 1231401
[2026-03-15 14:54:36] 2026-03-15 13:54:36,859 [wrapper] Test setup, not cleaning
[2026-03-15 14:54:36] 2026-03-15 13:54:36,864 [wrapper] apfmon messages muted
[2026-03-15 14:54:36] 2026-03-15 13:54:36,866 [wrapper] ==== wrapper stdout END ====
[2026-03-15 14:54:36] 2026-03-15 13:54:36,868 [wrapper] ==== wrapper stderr END ====
[2026-03-15 14:54:36]  *** Error codes and diagnostics ***
[2026-03-15 14:54:36]     "exeErrorCode": 0,
[2026-03-15 14:54:36]     "exeErrorDiag": "",
[2026-03-15 14:54:36]     "pilotErrorCode": 0,
[2026-03-15 14:54:36]     "pilotErrorDiag": "",
[2026-03-15 14:54:36]  *** Listing of results directory ***
[2026-03-15 14:54:36] total 618684
[2026-03-15 14:54:36] -rw-r--r--. 1 boinc boinc    584627 Mar 10 08:34 pilot3.tar.gz
[2026-03-15 14:54:36] -rw-r--r--. 1 boinc boinc      5111 Mar 10 08:39 queuedata.json
[2026-03-15 14:54:36] -rwx------. 1 boinc boinc     36322 Mar 10 08:39 runpilot2-wrapper.sh
[2026-03-15 14:54:36] -rw-r--r--. 1 boinc boinc       100 Mar 15 13:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 14:54:36] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 13:08 run_atlas
[2026-03-15 14:54:36] -rw-r--r--. 1 boinc boinc       105 Mar 15 13:08 job.xml
[2026-03-15 14:54:36] -rw-r--r--. 2 boinc boinc 444035920 Mar 15 13:36 EVNT.46701403._000788.pool.root.1
[2026-03-15 14:54:36] -rw-r--r--. 2 boinc boinc    597953 Mar 15 13:36 input.tar.gz
[2026-03-15 14:54:36] -rw-r--r--. 1 boinc boinc      6707 Mar 15 13:36 init_data.xml
[2026-03-15 14:54:36] -rw-r--r--. 2 boinc boinc     15845 Mar 15 13:36 start_atlas.sh
[2026-03-15 14:54:36] drwxrwx--x. 2 boinc boinc      4096 Mar 15 13:36 shared
[2026-03-15 14:54:36] -rw-r--r--. 1 boinc boinc         0 Mar 15 13:36 boinc_lockfile
[2026-03-15 14:54:36] -rw-r--r--. 1 boinc boinc      2564 Mar 15 13:36 pandaJob.out
[2026-03-15 14:54:36] -rw-------. 1 boinc boinc   1006481 Mar 15 13:36 agis_schedconf.cvmfs.json
[2026-03-15 14:54:36] -rw-------. 1 boinc boinc   1511579 Mar 15 13:36 agis_ddmendpoints.agis.ALL.json
[2026-03-15 14:54:36] -rw-------. 1 boinc boinc       443 Mar 15 13:36 workernode_map.json
[2026-03-15 14:54:36] drwx------. 5 boinc boinc      4096 Mar 15 13:36 pilot3
[2026-03-15 14:54:36] -rw-------. 1 boinc boinc 183641874 Mar 15 14:53 HITS.48955006._039500.pool.root.1
[2026-03-15 14:54:36] -rw-r--r--. 1 boinc boinc       530 Mar 15 14:53 boinc_task_state.xml
[2026-03-15 14:54:36] -rw-------. 1 boinc boinc      1028 Mar 15 14:53 memory_monitor_summary.json
[2026-03-15 14:54:36] -rw-------. 1 boinc boinc    273433 Mar 15 14:53 log.48955006._039500.job.log.tgz.1
[2026-03-15 14:54:36] -rw-------. 1 boinc boinc      6352 Mar 15 14:53 heartbeat.json
[2026-03-15 14:54:36] -rw-------. 1 boinc boinc        95 Mar 15 14:54 pilot_heartbeat.json
[2026-03-15 14:54:36] -rw-r--r--. 1 boinc boinc      8192 Mar 15 14:54 boinc_mmap_file
[2026-03-15 14:54:36] -rw-r--r--. 1 boinc boinc        27 Mar 15 14:54 wrapper_checkpoint.txt
[2026-03-15 14:54:36] -rw-------. 1 boinc boinc      5089 Mar 15 14:54 pilotlog.txt
[2026-03-15 14:54:36] -rw-------. 1 boinc boinc    684444 Mar 15 14:54 log.48955006._039500.job.log.1
[2026-03-15 14:54:36] -rw-------. 1 boinc boinc       357 Mar 15 14:54 output.list
[2026-03-15 14:54:36] -rw-r--r--. 1 boinc boinc       620 Mar 15 14:54 runtime_log
[2026-03-15 14:54:36] -rw-------. 1 boinc boinc    972800 Mar 15 14:54 result.tar.gz
[2026-03-15 14:54:36] -rw-r--r--. 1 boinc boinc      9221 Mar 15 14:54 runtime_log.err
[2026-03-15 14:54:36] -rw-------. 1 boinc boinc       661 Mar 15 14:54 BhaMDmAs6J9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmROfLDmEvk6tm.diag
[2026-03-15 14:54:36] -rw-r--r--. 1 boinc boinc     21284 Mar 15 14:54 stderr.txt
[2026-03-15 14:54:36] HITS file was successfully produced:
[2026-03-15 14:54:36] -rw-------. 1 boinc boinc 183641874 Mar 15 14:53 shared/HITS.pool.root.1
[2026-03-15 14:54:36]  *** Contents of shared directory: ***
[2026-03-15 14:54:36] total 614532
[2026-03-15 14:54:36] -rw-r--r--. 2 boinc boinc 444035920 Mar 15 13:36 ATLAS.root_0
[2026-03-15 14:54:36] -rw-r--r--. 2 boinc boinc    597953 Mar 15 13:36 input.tar.gz
[2026-03-15 14:54:36] -rw-r--r--. 2 boinc boinc     15845 Mar 15 13:36 start_atlas.sh
[2026-03-15 14:54:36] -rw-------. 1 boinc boinc 183641874 Mar 15 14:53 HITS.pool.root.1
[2026-03-15 14:54:36] -rw-------. 1 boinc boinc    972800 Mar 15 14:54 result.tar.gz
14:54:38 (1225413): run_atlas exited; CPU time 17939.294434
14:54:38 (1225413): called boinc_finish(0)

</stderr_txt>
]]>

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