Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:13:10 (973878): wrapper (7.7.26015): starting
09:13:10 (973878): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 09:13:10] Arguments: --nthreads 4
[2026-03-10 09:13:10] Threads: 4
[2026-03-10 09:13:10] Checking for CVMFS
[2026-03-10 09:13:10] No cvmfs_config command found, will try listing directly
[2026-03-10 09:13:10] CVMFS is ok
[2026-03-10 09:13:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 09:13:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 09:13:10] Further information can be found at the LHC@home message board.
[2026-03-10 09:13:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 09:13:10] Checking for apptainer binary...
[2026-03-10 09:13:10] which: no apptainer in ((null))
[2026-03-10 09:13:10] apptainer is not installed, using version from CVMFS
[2026-03-10 09:13:10] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 09:13:11] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot56/slots/10/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-03-10 09:13:11] apptainer works
[2026-03-10 09:13:11] Set ATHENA_PROC_NUMBER=4
[2026-03-10 09:13:11] Set ATHENA_CORE_NUMBER=4
[2026-03-10 09:13:11] Starting ATLAS job with PandaID=7041794044
[2026-03-10 09:13:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot56/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 10:29:35]  *** The last 200 lines of the pilot log: ***
[2026-03-10 10:29:35]  filetype=log
[2026-03-10 10:29:35]  guid=1a2de910-6726-427f-8e88-175db8733cf5
[2026-03-10 10:29:35]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-10 10:29:35]  is_altstaged=None
[2026-03-10 10:29:35]  is_tar=False
[2026-03-10 10:29:35]  lfn=log.48955015._011684.job.log.tgz.1
[2026-03-10 10:29:35]  mtime=0
[2026-03-10 10:29:35]  protocol_id=None
[2026-03-10 10:29:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-10 10:29:35]  replicas=None
[2026-03-10 10:29:35]  scope=mc23_13p6TeV
[2026-03-10 10:29:35]  status=None
[2026-03-10 10:29:35]  status_code=0
[2026-03-10 10:29:35]  storage_token=
[2026-03-10 10:29:35]  surl=/var/lib/boinc/var/slot56/slots/10/PanDA_Pilot-7041794044/log.48955015._011684.job.log.tgz.1
[2026-03-10 10:29:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/75/5e/log.48955015._011684.job.log.tgz.1
[2026-03-10 10:29:35]  workdir=None
[2026-03-10 10:29:35] ]
[2026-03-10 10:29:35] 2026-03-10 09:28:49,776 | INFO     | transferring file log.48955015._011684.job.log.tgz.1 from /var/lib/boinc/var/slot56/slots/10/PanDA_Pilot-7041794044/log.48955015._011684.job.log.tgz.1 to /var/lib/
[2026-03-10 10:29:35] 2026-03-10 09:28:49,777 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot56/slots/10/PanDA_Pilot-7041794044/log.48955015._011684.job.log.tgz.1 /var/lib/boinc/var/slot56/slots/10/
[2026-03-10 10:29:35] 2026-03-10 09:28:49,797 | INFO     | adding to output.list: log.48955015._011684.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/75/5e/log.48955015._011684.job.log.tg
[2026-03-10 10:29:35] 2026-03-10 09:28:49,798 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-10 10:29:35] 2026-03-10 09:28:49,798 | INFO     | summary of transferred files:
[2026-03-10 10:29:35] 2026-03-10 09:28:49,798 | INFO     |  -- lfn=log.48955015._011684.job.log.tgz.1, status_code=0, status=transferred
[2026-03-10 10:29:35] 2026-03-10 09:28:49,798 | INFO     | stage-out finished correctly
[2026-03-10 10:29:35] 2026-03-10 09:28:50,937 | INFO     | time since job start (4528s) is within the limit (349056.0s)
[2026-03-10 10:29:35] 2026-03-10 09:28:51,231 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-10 10:29:35] 2026-03-10 09:28:51,394 | INFO     | monitor loop #331: job 0:7041794044 is in state 'finished'
[2026-03-10 10:29:35] 2026-03-10 09:28:51,395 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-10 10:29:35] 2026-03-10 09:28:51,833 | INFO     | job 7041794044 has state=finished
[2026-03-10 10:29:35] 2026-03-10 09:28:51,833 | INFO     | preparing for final server update for job 7041794044 in state='finished'
[2026-03-10 10:29:35] 2026-03-10 09:28:51,833 | INFO     | reading metadata from: /var/lib/boinc/var/slot56/slots/10/PanDA_Pilot-7041794044/jobReport.json
[2026-03-10 10:29:35] 2026-03-10 09:28:51,835 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot56/slots/10/workernode_map.json
[2026-03-10 10:29:35] 2026-03-10 09:28:51,835 | INFO     | this job has now completed (state=finished)
[2026-03-10 10:29:35] 2026-03-10 09:28:51,835 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 10:29:35] 2026-03-10 09:28:51,835 | INFO     | log transfer has been attempted: DONE
[2026-03-10 10:29:35] 2026-03-10 09:28:51,835 | INFO     | job 7041794044 has finished - writing final server update
[2026-03-10 10:29:35] 2026-03-10 09:28:51,835 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2166532/.job.ad'
[2026-03-10 10:29:35] 2026-03-10 09:28:51,835 | INFO     | total number of processed events: 400 (read)
[2026-03-10 10:29:35] 2026-03-10 09:28:51,853 | INFO     | using path: /var/lib/boinc/var/slot56/slots/10/PanDA_Pilot-7041794044/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 10:29:35] 2026-03-10 09:28:51,853 | INFO     | extracted standard info from prmon json
[2026-03-10 10:29:35] 2026-03-10 09:28:51,853 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 10:29:35] 2026-03-10 09:28:51,853 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 10:29:35] 2026-03-10 09:28:51,853 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 10:29:35] 2026-03-10 09:28:51,853 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 10:29:35] 2026-03-10 09:28:51,855 | INFO     | fitting pss+swap vs Time
[2026-03-10 10:29:35] 2026-03-10 09:28:51,855 | INFO     | sum of square deviations: 93240818.0
[2026-03-10 10:29:35] 2026-03-10 09:28:51,855 | INFO     | sum of deviations: 621713708.0000001
[2026-03-10 10:29:35] 2026-03-10 09:28:51,855 | INFO     | mean x: 1773132740.0
[2026-03-10 10:29:35] 2026-03-10 09:28:51,855 | INFO     | mean y: 2322753.313432836
[2026-03-10 10:29:35] 2026-03-10 09:28:51,855 | INFO     | intersect: -11820620826.628134
[2026-03-10 10:29:35] 2026-03-10 09:28:51,855 | INFO     | chi2: 0.00021300170742968603
[2026-03-10 10:29:35] 2026-03-10 09:28:51,855 | INFO     | current memory leak: 6.67 B/s (using 67 data points, chi2=0.00)
[2026-03-10 10:29:35] 2026-03-10 09:28:51,855 | INFO     | could have reported an average CPU frequency of 3597 MHz (6 samples)
[2026-03-10 10:29:35] 2026-03-10 09:28:51,855 | INFO     | ..............................
[2026-03-10 10:29:35] 2026-03-10 09:28:51,855 | INFO     | . Timing measurements:
[2026-03-10 10:29:35] 2026-03-10 09:28:51,855 | INFO     | . get job = 0 s
[2026-03-10 10:29:35] 2026-03-10 09:28:51,855 | INFO     | . initial setup = 4 s
[2026-03-10 10:29:35] 2026-03-10 09:28:51,855 | INFO     | . payload setup = 4 s
[2026-03-10 10:29:35] 2026-03-10 09:28:51,856 | INFO     | . stage-in = 0 s
[2026-03-10 10:29:35] 2026-03-10 09:28:51,856 | INFO     | . payload execution = 4506 s
[2026-03-10 10:29:35] 2026-03-10 09:28:51,856 | INFO     | . stage-out = 0 s
[2026-03-10 10:29:35] 2026-03-10 09:28:51,856 | INFO     | . log creation = 0 s
[2026-03-10 10:29:35] 2026-03-10 09:28:51,856 | INFO     | ..............................
[2026-03-10 10:29:35] 2026-03-10 09:28:52,144 | INFO     | 
[2026-03-10 10:29:35] 2026-03-10 09:28:52,145 | INFO     | job summary report
[2026-03-10 10:29:35] 2026-03-10 09:28:52,145 | INFO     | --------------------------------------------------
[2026-03-10 10:29:35] 2026-03-10 09:28:52,145 | INFO     | PanDA job id: 7041794044
[2026-03-10 10:29:35] 2026-03-10 09:28:52,145 | INFO     | task id: 48955015
[2026-03-10 10:29:35] 2026-03-10 09:28:52,145 | INFO     | errors: (none)
[2026-03-10 10:29:35] 2026-03-10 09:28:52,145 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 10:29:35] 2026-03-10 09:28:52,145 | INFO     | pilot state: finished 
[2026-03-10 10:29:35] 2026-03-10 09:28:52,145 | INFO     | transexitcode: 0
[2026-03-10 10:29:35] 2026-03-10 09:28:52,145 | INFO     | exeerrorcode: 0
[2026-03-10 10:29:35] 2026-03-10 09:28:52,145 | INFO     | exeerrordiag: 
[2026-03-10 10:29:35] 2026-03-10 09:28:52,145 | INFO     | exitcode: 0
[2026-03-10 10:29:35] 2026-03-10 09:28:52,145 | INFO     | exitmsg: OK
[2026-03-10 10:29:35] 2026-03-10 09:28:52,145 | INFO     | cpuconsumptiontime: 17189 s
[2026-03-10 10:29:35] 2026-03-10 09:28:52,145 | INFO     | nevents: 400
[2026-03-10 10:29:35] 2026-03-10 09:28:52,145 | INFO     | neventsw: 0
[2026-03-10 10:29:35] 2026-03-10 09:28:52,145 | INFO     | pid: 984164
[2026-03-10 10:29:35] 2026-03-10 09:28:52,145 | INFO     | pgrp: 984164
[2026-03-10 10:29:35] 2026-03-10 09:28:52,145 | INFO     | corecount: 4
[2026-03-10 10:29:35] 2026-03-10 09:28:52,145 | INFO     | event service: False
[2026-03-10 10:29:35] 2026-03-10 09:28:52,145 | INFO     | sizes: {0: 2279988, 1: 2280250, 11: 2280278, 4514: 2306480, 4515: 2306479, 4517: 2315557, 4518: 2315741, 4519: 2315935}
[2026-03-10 10:29:35] 2026-03-10 09:28:52,145 | INFO     | --------------------------------------------------
[2026-03-10 10:29:35] 2026-03-10 09:28:52,145 | INFO     | 
[2026-03-10 10:29:35] 2026-03-10 09:28:52,145 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot56/slots/10
[2026-03-10 10:29:35] 2026-03-10 09:28:52,159 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 10:29:35] 2026-03-10 09:28:52,159 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 10:29:35] 2026-03-10 09:28:52,159 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 10:29:35] 2026-03-10 09:28:52,159 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 10:29:35] 2026-03-10 09:28:52,159 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 10:29:35] 2026-03-10 09:28:52,159 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 10:29:35] 2026-03-10 09:28:52,159 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 10:29:35] 2026-03-10 09:28:52,159 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 10:29:35] 2026-03-10 09:28:52,159 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 10:29:35] 2026-03-10 09:28:52,159 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 10:29:35] 2026-03-10 09:28:52,159 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 10:29:35] 2026-03-10 09:28:52,159 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 10:29:35] 2026-03-10 09:28:52,159 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 10:29:35] 2026-03-10 09:28:52,159 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 10:29:35] 2026-03-10 09:28:52,159 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 10:29:35] 2026-03-10 09:28:52,159 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 10:29:35] 2026-03-10 09:28:52,159 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 10:29:35] 2026-03-10 09:28:52,159 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 10:29:35] 2026-03-10 09:28:52,159 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 10:29:35] 2026-03-10 09:28:52,159 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 10:29:35] 2026-03-10 09:28:52,160 | INFO     | job 7041794044 has completed (purged errors)
[2026-03-10 10:29:35] 2026-03-10 09:28:52,160 | INFO     | overall cleanup function is called
[2026-03-10 10:29:35] 2026-03-10 09:28:53,166 | INFO     | --- collectZombieJob: --- 10, [984164]
[2026-03-10 10:29:35] 2026-03-10 09:28:53,167 | INFO     | zombie collector waiting for pid 984164
[2026-03-10 10:29:35] 2026-03-10 09:28:53,167 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 10:29:35] 2026-03-10 09:28:53,167 | INFO     | collected zombie processes
[2026-03-10 10:29:35] 2026-03-10 09:28:53,167 | INFO     | will attempt to kill all subprocesses of pid=984164
[2026-03-10 10:29:35] 2026-03-10 09:28:53,578 | INFO     | process IDs to be killed: [984164] (in reverse order)
[2026-03-10 10:29:35] 2026-03-10 09:28:53,783 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 10:29:35] 2026-03-10 09:28:53,784 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 10:29:35] 2026-03-10 09:28:53,808 | INFO     | did not find any defunct processes belonging to 984164
[2026-03-10 10:29:35] 2026-03-10 09:28:53,831 | INFO     | did not find any defunct processes belonging to 984164
[2026-03-10 10:29:35] 2026-03-10 09:28:53,832 | INFO     | ready for new job
[2026-03-10 10:29:35] 2026-03-10 09:28:53,832 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 10:29:35] 2026-03-10 09:28:53,833 | INFO     | **************************************
[2026-03-10 10:29:35] 2026-03-10 09:28:53,833 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 10:29:35] 2026-03-10 09:28:53,833 | INFO     | **************************************
[2026-03-10 10:29:35] 2026-03-10 09:28:53,833 | INFO     | 
[2026-03-10 10:29:35] 2026-03-10 09:28:53,838 | INFO     | architecture information:
[2026-03-10 10:29:35] 2026-03-10 09:28:53,838 | INFO     | executing command: cat /etc/os-release
[2026-03-10 10:29:35] 2026-03-10 09:28:53,853 | INFO     | cat /etc/os-release:
[2026-03-10 10:29:35] NAME="CentOS Linux"
[2026-03-10 10:29:35] VERSION="7 (Core)"
[2026-03-10 10:29:35] ID="centos"
[2026-03-10 10:29:35] ID_LIKE="rhel fedora"
[2026-03-10 10:29:35] VERSION_ID="7"
[2026-03-10 10:29:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 10:29:35] ANSI_COLOR="0;31"
[2026-03-10 10:29:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 10:29:35] HOME_URL="https://www.centos.org/"
[2026-03-10 10:29:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 10:29:35] 
[2026-03-10 10:29:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 10:29:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 10:29:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 10:29:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 10:29:35] 
[2026-03-10 10:29:35] 2026-03-10 09:28:53,853 | INFO     | **************************************
[2026-03-10 10:29:35] 2026-03-10 09:28:54,359 | INFO     | executing command: df -mP /var/lib/boinc/var/slot56/slots/10
[2026-03-10 10:29:35] 2026-03-10 09:28:54,373 | INFO     | sufficient remaining disk space (19914555392 B)
[2026-03-10 10:29:35] 2026-03-10 09:28:54,373 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 10:29:35] 2026-03-10 09:28:54,373 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 10:29:35] 2026-03-10 09:28:54,373 | INFO     | update_server=False
[2026-03-10 10:29:35] 2026-03-10 09:28:54,373 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 10:29:35] 2026-03-10 09:28:54,903 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 10:29:35] 2026-03-10 09:28:54,904 | INFO     | aborting loop
[2026-03-10 10:29:35] 2026-03-10 09:28:55,314 | INFO     | all data control threads have been joined
[2026-03-10 10:29:35] 2026-03-10 09:28:55,361 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 10:29:35] 2026-03-10 09:28:55,370 | INFO     | all job control threads have been joined
[2026-03-10 10:29:35] 2026-03-10 09:28:55,378 | INFO     | [job] retrieve thread has finished
[2026-03-10 10:29:35] 2026-03-10 09:28:55,598 | INFO     | all payload control threads have been joined
[2026-03-10 10:29:35] 2026-03-10 09:28:55,908 | INFO     | [job] job monitor thread has finished
[2026-03-10 10:29:35] 2026-03-10 09:28:56,057 | INFO     | [job] validate thread has finished
[2026-03-10 10:29:35] 2026-03-10 09:28:56,228 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 10:29:35] 2026-03-10 09:28:56,244 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 10:29:35] 2026-03-10 09:28:56,256 | INFO     | [payload] failed_post thread has finished
[2026-03-10 10:29:35] 2026-03-10 09:28:56,319 | INFO     | [data] control thread has finished
[2026-03-10 10:29:35] 2026-03-10 09:28:56,375 | INFO     | [job] control thread has finished
[2026-03-10 10:29:35] 2026-03-10 09:28:56,394 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 10:29:35] 2026-03-10 09:28:56,543 | INFO     | [data] copytool_in thread has finished
[2026-03-10 10:29:35] 2026-03-10 09:28:56,602 | INFO     | [payload] control thread has finished
[2026-03-10 10:29:35] 2026-03-10 09:28:56,826 | INFO     | [payload] validate_post thread has finished
[2026-03-10 10:29:35] 2026-03-10 09:28:56,912 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 10:29:35] 2026-03-10 09:28:57,299 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 10:29:35] 2026-03-10 09:28:57,366 | INFO     | [data] copytool_out thread has finished
[2026-03-10 10:29:35] 2026-03-10 09:28:57,917 | INFO     | [job] queue monitor thread has finished
[2026-03-10 10:29:35] 2026-03-10 09:29:01,304 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 10:29:35] 2026-03-10 09:29:05,147 | INFO     | job.realtimelogging is not enabled
[2026-03-10 10:29:35] 2026-03-10 09:29:06,149 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 10:29:35] 2026-03-10 09:29:24,492 | INFO     | PID=978426 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-10 10:29:35] 2026-03-10 09:29:24,492 | INFO     | .. there are 57 such processes running
[2026-03-10 10:29:35] 2026-03-10 09:29:24,493 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 10:29:35] 2026-03-10 09:29:24,493 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 10:29:35] 2026-03-10 09:29:24,493 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 10:29:35] 2026-03-10 09:29:29,199 | INFO     | [monitor] cgroup control has ended
[2026-03-10 10:29:35] 2026-03-10 09:29:29,984 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22439590053696)>', '<ExcThread(monitor, started 22439351564032)>']
[2026-03-10 10:29:35] 2026-03-10 09:29:30,522 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 10:29:35] 2026-03-10 09:29:30,523 | INFO     | [monitor] control thread has ended
[2026-03-10 10:29:35] 2026-03-10 09:29:35,001 | INFO     | all workflow threads have been joined
[2026-03-10 10:29:35] 2026-03-10 09:29:35,001 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 10:29:35] 2026-03-10 09:29:35,001 | INFO     | traces error code: 0
[2026-03-10 10:29:35] 2026-03-10 09:29:35,002 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 10:29:35] 2026-03-10 09:29:35,115 [wrapper] ==== pilot stdout END ====
[2026-03-10 10:29:35] 2026-03-10 09:29:35,117 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 10:29:35] 2026-03-10 09:29:35,122 [wrapper] pilotpid: 978426
[2026-03-10 10:29:35] 2026-03-10 09:29:35,123 [wrapper] Pilot exit status: 0
[2026-03-10 10:29:35] 2026-03-10 09:29:35,133 [wrapper] pandaids: 7041794044
[2026-03-10 10:29:35] 2026-03-10 09:29:35,245 [wrapper] cleanup supervisor_pilot 1828334 978427
[2026-03-10 10:29:35] 2026-03-10 09:29:35,247 [wrapper] Test setup, not cleaning
[2026-03-10 10:29:35] 2026-03-10 09:29:35,250 [wrapper] apfmon messages muted
[2026-03-10 10:29:35] 2026-03-10 09:29:35,252 [wrapper] ==== wrapper stdout END ====
[2026-03-10 10:29:35] 2026-03-10 09:29:35,255 [wrapper] ==== wrapper stderr END ====
[2026-03-10 10:29:35]  *** Error codes and diagnostics ***
[2026-03-10 10:29:35]     "exeErrorCode": 0,
[2026-03-10 10:29:35]     "exeErrorDiag": "",
[2026-03-10 10:29:35]     "pilotErrorCode": 0,
[2026-03-10 10:29:35]     "pilotErrorDiag": "",
[2026-03-10 10:29:35]  *** Listing of results directory ***
[2026-03-10 10:29:35] total 608312
[2026-03-10 10:29:35] -rw-r--r--. 1 boinc boinc    584627 Mar 10 04:18 pilot3.tar.gz
[2026-03-10 10:29:35] -rw-r--r--. 1 boinc boinc      5111 Mar 10 04:54 queuedata.json
[2026-03-10 10:29:35] -rwx------. 1 boinc boinc     36322 Mar 10 04:54 runpilot2-wrapper.sh
[2026-03-10 10:29:35] -rw-r--r--. 1 boinc boinc       100 Mar 10 08:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 10:29:35] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 08:59 run_atlas
[2026-03-10 10:29:35] -rw-r--r--. 1 boinc boinc       105 Mar 10 08:59 job.xml
[2026-03-10 10:29:35] -rw-r--r--. 2 boinc boinc 437825139 Mar 10 09:13 EVNT.46701403._002284.pool.root.1
[2026-03-10 10:29:35] -rw-r--r--. 1 boinc boinc      6706 Mar 10 09:13 init_data.xml
[2026-03-10 10:29:35] -rw-r--r--. 2 boinc boinc     15845 Mar 10 09:13 start_atlas.sh
[2026-03-10 10:29:35] drwxrwx--x. 2 boinc boinc      4096 Mar 10 09:13 shared
[2026-03-10 10:29:35] -rw-r--r--. 2 boinc boinc    597957 Mar 10 09:13 input.tar.gz
[2026-03-10 10:29:35] -rw-r--r--. 1 boinc boinc         0 Mar 10 09:13 boinc_lockfile
[2026-03-10 10:29:35] -rw-r--r--. 1 boinc boinc      2572 Mar 10 09:13 pandaJob.out
[2026-03-10 10:29:35] -rw-------. 1 boinc boinc   1005057 Mar 10 09:13 agis_schedconf.cvmfs.json
[2026-03-10 10:29:35] -rw-------. 1 boinc boinc   1511578 Mar 10 09:13 agis_ddmendpoints.agis.ALL.json
[2026-03-10 10:29:35] -rw-------. 1 boinc boinc       444 Mar 10 09:13 workernode_map.json
[2026-03-10 10:29:35] drwx------. 5 boinc boinc      4096 Mar 10 09:13 pilot3
[2026-03-10 10:29:35] -rw-r--r--. 1 boinc boinc       530 Mar 10 10:28 boinc_task_state.xml
[2026-03-10 10:29:35] -rw-------. 1 boinc boinc 179235787 Mar 10 10:28 HITS.48955015._011684.pool.root.1
[2026-03-10 10:29:35] -rw-------. 1 boinc boinc      1029 Mar 10 10:28 memory_monitor_summary.json
[2026-03-10 10:29:35] -rw-------. 1 boinc boinc    288327 Mar 10 10:28 log.48955015._011684.job.log.tgz.1
[2026-03-10 10:29:35] -rw-------. 1 boinc boinc      6350 Mar 10 10:28 heartbeat.json
[2026-03-10 10:29:35] -rw-------. 1 boinc boinc        95 Mar 10 10:29 pilot_heartbeat.json
[2026-03-10 10:29:35] -rw-r--r--. 1 boinc boinc      8192 Mar 10 10:29 boinc_mmap_file
[2026-03-10 10:29:35] -rw-r--r--. 1 boinc boinc        27 Mar 10 10:29 wrapper_checkpoint.txt
[2026-03-10 10:29:35] -rw-------. 1 boinc boinc      4901 Mar 10 10:29 pilotlog.txt
[2026-03-10 10:29:35] -rw-------. 1 boinc boinc    671045 Mar 10 10:29 log.48955015._011684.job.log.1
[2026-03-10 10:29:35] -rw-------. 1 boinc boinc       357 Mar 10 10:29 output.list
[2026-03-10 10:29:35] -rw-r--r--. 1 boinc boinc       620 Mar 10 10:29 runtime_log
[2026-03-10 10:29:35] -rw-------. 1 boinc boinc    972800 Mar 10 10:29 result.tar.gz
[2026-03-10 10:29:35] -rw-r--r--. 1 boinc boinc      9221 Mar 10 10:29 runtime_log.err
[2026-03-10 10:29:35] -rw-------. 1 boinc boinc       662 Mar 10 10:29 1tsMDmOM3J9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmjneLDmVQdoBn.diag
[2026-03-10 10:29:35] -rw-r--r--. 1 boinc boinc     21170 Mar 10 10:29 stderr.txt
[2026-03-10 10:29:35] HITS file was successfully produced:
[2026-03-10 10:29:35] -rw-------. 1 boinc boinc 179235787 Mar 10 10:28 shared/HITS.pool.root.1
[2026-03-10 10:29:35]  *** Contents of shared directory: ***
[2026-03-10 10:29:35] total 604160
[2026-03-10 10:29:35] -rw-r--r--. 2 boinc boinc 437825139 Mar 10 09:13 ATLAS.root_0
[2026-03-10 10:29:35] -rw-r--r--. 2 boinc boinc     15845 Mar 10 09:13 start_atlas.sh
[2026-03-10 10:29:35] -rw-r--r--. 2 boinc boinc    597957 Mar 10 09:13 input.tar.gz
[2026-03-10 10:29:35] -rw-------. 1 boinc boinc 179235787 Mar 10 10:28 HITS.pool.root.1
[2026-03-10 10:29:35] -rw-------. 1 boinc boinc    972800 Mar 10 10:29 result.tar.gz
10:29:36 (973878): run_atlas exited; CPU time 17367.297707
10:29:36 (973878): called boinc_finish(0)

</stderr_txt>
]]>

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