Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:14:35 (26981): wrapper (7.7.26015): starting
19:14:35 (26981): wrapper: running run_atlas (--nthreads 8)
[2026-03-10 19:14:35] Arguments: --nthreads 8
[2026-03-10 19:14:35] Threads: 8
[2026-03-10 19:14:35] Checking for CVMFS
[2026-03-10 19:14:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-10 19:14:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-10 19:14:37] Running cvmfs_config stat atlas.cern.ch
[2026-03-10 19:14:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-10 19:14:39] 2.11.2.0 29086 122161 140400 157125 1 93 22002697 25165824 1081 130560 160 37281404 99.790 34684721 1130 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-10 19:14:39] CVMFS is ok
[2026-03-10 19:14:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 19:14:39] Checking for apptainer binary...
[2026-03-10 19:14:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-10 19:14:39] Running /usr/bin/apptainer --version
[2026-03-10 19:14:39] apptainer version 1.3.2-1.el7
[2026-03-10 19:14:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 19:15:07] cg-vwn413.simple-grid.lan
[2026-03-10 19:15:07] apptainer works
[2026-03-10 19:15:08] Set ATHENA_PROC_NUMBER=8
[2026-03-10 19:15:08] Set ATHENA_CORE_NUMBER=8
[2026-03-10 19:15:08] Starting ATLAS job with PandaID=7048426455
[2026-03-10 19:15:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 23:31:11]  *** The last 200 lines of the pilot log: ***
[2026-03-10 23:31:11] 2026-03-10 22:30:08,766 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-7048426455/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 23:31:11] 2026-03-10 22:30:08,767 | INFO     | extracted standard info from prmon json
[2026-03-10 23:31:11] 2026-03-10 22:30:08,767 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 23:31:11] 2026-03-10 22:30:08,767 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 23:31:11] 2026-03-10 22:30:08,768 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 23:31:11] 2026-03-10 22:30:08,768 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 23:31:11] 2026-03-10 22:30:08,773 | INFO     | fitting pss+swap vs Time
[2026-03-10 23:31:11] 2026-03-10 22:30:08,774 | INFO     | sum of square deviations: 4286517580.0
[2026-03-10 23:31:11] 2026-03-10 22:30:08,776 | INFO     | sum of deviations: 85640441961.49995
[2026-03-10 23:31:11] 2026-03-10 22:30:08,776 | INFO     | mean x: 1773174498.5
[2026-03-10 23:31:11] 2026-03-10 22:30:08,776 | INFO     | mean y: 2445655.6791666667
[2026-03-10 23:31:11] 2026-03-10 22:30:08,776 | INFO     | intersect: -35423852007.23653
[2026-03-10 23:31:11] 2026-03-10 22:30:08,777 | INFO     | chi2: 9.128834951066658
[2026-03-10 23:31:11] 2026-03-10 22:30:08,777 | INFO     | sum of square deviations: 4024149870.0
[2026-03-10 23:31:11] 2026-03-10 22:30:08,779 | INFO     | sum of deviations: 115609763952.0
[2026-03-10 23:31:11] 2026-03-10 22:30:08,779 | INFO     | mean x: 1773174346.0
[2026-03-10 23:31:11] 2026-03-10 22:30:08,779 | INFO     | mean y: 2462838.4170212764
[2026-03-10 23:31:11] 2026-03-10 22:30:08,779 | INFO     | intersect: -50939046352.1445
[2026-03-10 23:31:11] 2026-03-10 22:30:08,780 | INFO     | chi2: 7.697015299382562
[2026-03-10 23:31:11] 2026-03-10 22:30:08,780 | INFO     | current chi2=7.697015299382562 (change=15.684582527333296 %)
[2026-03-10 23:31:11] 2026-03-10 22:30:08,780 | INFO     | right removable region: 234
[2026-03-10 23:31:11] 2026-03-10 22:30:08,781 | INFO     | sum of square deviations: 4024149870.0
[2026-03-10 23:31:11] 2026-03-10 22:30:08,786 | INFO     | sum of deviations: 1679841912.0000381
[2026-03-10 23:31:11] 2026-03-10 22:30:08,786 | INFO     | mean x: 1773174651.0
[2026-03-10 23:31:11] 2026-03-10 22:30:08,786 | INFO     | mean y: 2494426.9617021275
[2026-03-10 23:31:11] 2026-03-10 22:30:08,786 | INFO     | intersect: -737699947.5698409
[2026-03-10 23:31:11] 2026-03-10 22:30:08,787 | INFO     | chi2: 4.1263523935667195
[2026-03-10 23:31:11] 2026-03-10 22:30:08,787 | INFO     | current chi2=4.1263523935667195 (change=54.79869648552934 %)
[2026-03-10 23:31:11] 2026-03-10 22:30:08,788 | INFO     | sum of square deviations: 3772712597.5
[2026-03-10 23:31:11] 2026-03-10 22:30:08,790 | INFO     | sum of deviations: -55257663221.5
[2026-03-10 23:31:11] 2026-03-10 22:30:08,790 | INFO     | mean x: 1773174803.5
[2026-03-10 23:31:11] 2026-03-10 22:30:08,790 | INFO     | mean y: 2528863.8391304347
[2026-03-10 23:31:11] 2026-03-10 22:30:08,790 | INFO     | intersect: 25973628859.523983
[2026-03-10 23:31:11] 2026-03-10 22:30:08,791 | INFO     | chi2: 1.8561082909767446
[2026-03-10 23:31:11] 2026-03-10 22:30:08,791 | INFO     | current chi2=1.8561082909767446 (change=55.01818279334185 %)
[2026-03-10 23:31:11] 2026-03-10 22:30:08,791 | INFO     | sum of square deviations: 3531973200.0
[2026-03-10 23:31:11] 2026-03-10 22:30:08,793 | INFO     | sum of deviations: -63165991477.000015
[2026-03-10 23:31:11] 2026-03-10 22:30:08,793 | INFO     | mean x: 1773174956.0
[2026-03-10 23:31:11] 2026-03-10 22:30:08,793 | INFO     | mean y: 2533837.2844444443
[2026-03-10 23:31:11] 2026-03-10 22:30:08,794 | INFO     | intersect: 31714086506.462646
[2026-03-10 23:31:11] 2026-03-10 22:30:08,794 | INFO     | chi2: 1.7731822049737112
[2026-03-10 23:31:11] 2026-03-10 22:30:08,794 | INFO     | current chi2=1.7731822049737112 (change=4.467739646774327 %)
[2026-03-10 23:31:11] 2026-03-10 22:30:08,794 | INFO     | left removable region: 30
[2026-03-10 23:31:11] 2026-03-10 22:30:08,795 | INFO     | sum of square deviations: 2632440055.0
[2026-03-10 23:31:11] 2026-03-10 22:30:08,796 | INFO     | sum of deviations: -12581485429.5
[2026-03-10 23:31:11] 2026-03-10 22:30:08,797 | INFO     | mean x: 1773175230.5
[2026-03-10 23:31:11] 2026-03-10 22:30:08,797 | INFO     | mean y: 2539999.2401960786
[2026-03-10 23:31:11] 2026-03-10 22:30:08,797 | INFO     | intersect: 8477254659.546508
[2026-03-10 23:31:11] 2026-03-10 22:30:08,797 | INFO     | chi2: 0.11016099770422255
[2026-03-10 23:31:11] 2026-03-10 22:30:08,798 | INFO     | current memory leak: -4.78 B/s (using 204 data points, chi2=0.11)
[2026-03-10 23:31:11] 2026-03-10 22:30:08,798 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-03-10 23:31:11] 2026-03-10 22:30:08,798 | INFO     | ..............................
[2026-03-10 23:31:11] 2026-03-10 22:30:08,799 | INFO     | . Timing measurements:
[2026-03-10 23:31:11] 2026-03-10 22:30:08,799 | INFO     | . get job = 0 s
[2026-03-10 23:31:11] 2026-03-10 22:30:08,799 | INFO     | . initial setup = 128 s
[2026-03-10 23:31:11] 2026-03-10 22:30:08,799 | INFO     | . payload setup = 163 s
[2026-03-10 23:31:11] 2026-03-10 22:30:08,799 | INFO     | . stage-in = 0 s
[2026-03-10 23:31:11] 2026-03-10 22:30:08,799 | INFO     | . payload execution = 14731 s
[2026-03-10 23:31:11] 2026-03-10 22:30:08,799 | INFO     | . stage-out = 7 s
[2026-03-10 23:31:11] 2026-03-10 22:30:08,799 | INFO     | . log creation = 1 s
[2026-03-10 23:31:11] 2026-03-10 22:30:08,799 | INFO     | ..............................
[2026-03-10 23:31:11] 2026-03-10 22:30:09,124 | INFO     | 
[2026-03-10 23:31:11] 2026-03-10 22:30:09,125 | INFO     | job summary report
[2026-03-10 23:31:11] 2026-03-10 22:30:09,125 | INFO     | --------------------------------------------------
[2026-03-10 23:31:11] 2026-03-10 22:30:09,125 | INFO     | PanDA job id: 7048426455
[2026-03-10 23:31:11] 2026-03-10 22:30:09,125 | INFO     | task id: 48997948
[2026-03-10 23:31:11] 2026-03-10 22:30:09,125 | INFO     | errors: (none)
[2026-03-10 23:31:11] 2026-03-10 22:30:09,125 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 23:31:11] 2026-03-10 22:30:09,125 | INFO     | pilot state: finished 
[2026-03-10 23:31:11] 2026-03-10 22:30:09,126 | INFO     | transexitcode: 0
[2026-03-10 23:31:11] 2026-03-10 22:30:09,126 | INFO     | exeerrorcode: 0
[2026-03-10 23:31:11] 2026-03-10 22:30:09,126 | INFO     | exeerrordiag: 
[2026-03-10 23:31:11] 2026-03-10 22:30:09,126 | INFO     | exitcode: 0
[2026-03-10 23:31:11] 2026-03-10 22:30:09,126 | INFO     | exitmsg: OK
[2026-03-10 23:31:11] 2026-03-10 22:30:09,126 | INFO     | cpuconsumptiontime: 70306 s
[2026-03-10 23:31:11] 2026-03-10 22:30:09,126 | INFO     | nevents: 400
[2026-03-10 23:31:11] 2026-03-10 22:30:09,126 | INFO     | neventsw: 0
[2026-03-10 23:31:11] 2026-03-10 22:30:09,126 | INFO     | pid: 3096
[2026-03-10 23:31:11] 2026-03-10 22:30:09,126 | INFO     | pgrp: 3096
[2026-03-10 23:31:11] 2026-03-10 22:30:09,127 | INFO     | corecount: 8
[2026-03-10 23:31:11] 2026-03-10 22:30:09,127 | INFO     | event service: False
[2026-03-10 23:31:11] 2026-03-10 22:30:09,127 | INFO     | sizes: {0: 2279157, 1: 2280216, 2: 2280304, 14899: 2311299, 14900: 2311298, 14908: 2320354, 14909: 2320538, 14911: 2320732}
[2026-03-10 23:31:11] 2026-03-10 22:30:09,127 | INFO     | --------------------------------------------------
[2026-03-10 23:31:11] 2026-03-10 22:30:09,127 | INFO     | 
[2026-03-10 23:31:11] 2026-03-10 22:30:09,127 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2026-03-10 23:31:11] 2026-03-10 22:30:09,222 | INFO     | time since job start (14914s) is within the limit (349056.0s)
[2026-03-10 23:31:11] 2026-03-10 22:30:09,700 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 23:31:11] 2026-03-10 22:30:09,700 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 23:31:11] 2026-03-10 22:30:09,700 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 23:31:11] 2026-03-10 22:30:09,700 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 23:31:11] 2026-03-10 22:30:09,700 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 23:31:11] 2026-03-10 22:30:09,701 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 23:31:11] 2026-03-10 22:30:09,701 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 23:31:11] 2026-03-10 22:30:09,701 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 23:31:11] 2026-03-10 22:30:09,701 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 23:31:11] 2026-03-10 22:30:09,701 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 23:31:11] 2026-03-10 22:30:09,701 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 23:31:11] 2026-03-10 22:30:09,701 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 23:31:11] 2026-03-10 22:30:09,701 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 23:31:11] 2026-03-10 22:30:09,702 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 23:31:11] 2026-03-10 22:30:09,702 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 23:31:11] 2026-03-10 22:30:09,702 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 23:31:11] 2026-03-10 22:30:09,702 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 23:31:11] 2026-03-10 22:30:09,702 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 23:31:11] 2026-03-10 22:30:09,702 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 23:31:11] 2026-03-10 22:30:09,702 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 23:31:11] 2026-03-10 22:30:09,702 | INFO     | job 7048426455 has completed (purged errors)
[2026-03-10 23:31:11] 2026-03-10 22:30:09,703 | INFO     | overall cleanup function is called
[2026-03-10 23:31:11] 2026-03-10 22:30:10,714 | INFO     | --- collectZombieJob: --- 10, [3096]
[2026-03-10 23:31:11] 2026-03-10 22:30:10,715 | INFO     | zombie collector waiting for pid 3096
[2026-03-10 23:31:11] 2026-03-10 22:30:10,715 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 23:31:11] 2026-03-10 22:30:10,715 | INFO     | collected zombie processes
[2026-03-10 23:31:11] 2026-03-10 22:30:10,715 | INFO     | will attempt to kill all subprocesses of pid=3096
[2026-03-10 23:31:11] 2026-03-10 22:30:10,792 | INFO     | process IDs to be killed: [3096] (in reverse order)
[2026-03-10 23:31:11] 2026-03-10 22:30:11,600 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 23:31:11] 2026-03-10 22:30:11,600 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 23:31:11] 2026-03-10 22:30:11,602 | INFO     | did not find any defunct processes belonging to 3096
[2026-03-10 23:31:11] 2026-03-10 22:30:11,604 | INFO     | did not find any defunct processes belonging to 3096
[2026-03-10 23:31:11] 2026-03-10 22:30:11,604 | INFO     | ready for new job
[2026-03-10 23:31:11] 2026-03-10 22:30:11,604 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 23:31:11] 2026-03-10 22:30:11,614 | INFO     | **************************************
[2026-03-10 23:31:11] 2026-03-10 22:30:11,614 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 23:31:11] 2026-03-10 22:30:11,614 | INFO     | **************************************
[2026-03-10 23:31:11] 2026-03-10 22:30:11,615 | INFO     | 
[2026-03-10 23:31:11] 2026-03-10 22:30:11,615 | INFO     | pilot is running in a VM
[2026-03-10 23:31:11] 2026-03-10 22:30:11,615 | INFO     | architecture information:
[2026-03-10 23:31:11] 2026-03-10 22:30:11,616 | INFO     | executing command: cat /etc/os-release
[2026-03-10 23:31:11] 2026-03-10 22:30:11,918 | INFO     | cat /etc/os-release:
[2026-03-10 23:31:11] NAME="CentOS Linux"
[2026-03-10 23:31:11] VERSION="7 (Core)"
[2026-03-10 23:31:11] ID="centos"
[2026-03-10 23:31:11] ID_LIKE="rhel fedora"
[2026-03-10 23:31:11] VERSION_ID="7"
[2026-03-10 23:31:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 23:31:11] ANSI_COLOR="0;31"
[2026-03-10 23:31:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 23:31:11] HOME_URL="https://www.centos.org/"
[2026-03-10 23:31:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 23:31:11] 
[2026-03-10 23:31:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 23:31:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 23:31:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 23:31:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 23:31:11] 
[2026-03-10 23:31:11] 2026-03-10 22:30:11,918 | INFO     | **************************************
[2026-03-10 23:31:11] 2026-03-10 22:30:12,422 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2026-03-10 23:31:11] 2026-03-10 22:30:12,685 | INFO     | sufficient remaining disk space (496965255168 B)
[2026-03-10 23:31:11] 2026-03-10 22:30:12,685 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 23:31:11] 2026-03-10 22:30:12,686 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 23:31:11] 2026-03-10 22:30:12,686 | INFO     | update_server=False
[2026-03-10 23:31:11] 2026-03-10 22:30:12,686 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 23:31:11] 2026-03-10 22:30:12,689 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 23:31:11] 2026-03-10 22:30:12,946 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 23:31:11] 2026-03-10 22:30:13,116 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-10 23:31:11] 2026-03-10 22:30:13,117 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-10 23:31:11] 2026-03-10 22:30:13,117 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 23:31:11] 2026-03-10 22:30:13,117 | INFO     | will abort loop
[2026-03-10 23:31:11] 2026-03-10 22:30:13,628 | INFO     | all data control threads have been joined
[2026-03-10 23:31:11] 2026-03-10 22:30:13,692 | INFO     | [job] retrieve thread has finished
[2026-03-10 23:31:11] 2026-03-10 22:30:13,822 | INFO     | all payload control threads have been joined
[2026-03-10 23:31:11] 2026-03-10 22:30:13,941 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 23:31:11] 2026-03-10 22:30:13,955 | INFO     | [job] validate thread has finished
[2026-03-10 23:31:11] 2026-03-10 22:30:13,985 | INFO     | all job control threads have been joined
[2026-03-10 23:31:11] 2026-03-10 22:30:14,122 | INFO     | [job] job monitor thread has finished
[2026-03-10 23:31:11] 2026-03-10 22:30:14,569 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 23:31:11] 2026-03-10 22:30:14,590 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 23:31:11] 2026-03-10 22:30:14,634 | INFO     | [data] control thread has finished
[2026-03-10 23:31:11] 2026-03-10 22:30:14,639 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 23:31:11] 2026-03-10 22:30:14,676 | INFO     | [payload] failed_post thread has finished
[2026-03-10 23:31:11] 2026-03-10 22:30:14,696 | INFO     | [data] copytool_out thread has finished
[2026-03-10 23:31:11] 2026-03-10 22:30:14,743 | INFO     | [data] copytool_in thread has finished
[2026-03-10 23:31:11] 2026-03-10 22:30:14,828 | INFO     | [payload] control thread has finished
[2026-03-10 23:31:11] 2026-03-10 22:30:14,888 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 23:31:11] 2026-03-10 22:30:14,892 | INFO     | [payload] validate_post thread has finished
[2026-03-10 23:31:11] 2026-03-10 22:30:14,947 | INFO     | [job] queue monitor thread has finished
[2026-03-10 23:31:11] 2026-03-10 22:30:14,991 | INFO     | [job] control thread has finished
[2026-03-10 23:31:11] 2026-03-10 22:30:16,955 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 23:31:11] 2026-03-10 22:30:42,426 | INFO     | PID=31011 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-10 23:31:11] 2026-03-10 22:30:42,426 | INFO     | .. there are 2 such processes running
[2026-03-10 23:31:11] 2026-03-10 22:30:42,427 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 23:31:11] 2026-03-10 22:30:42,427 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 23:31:11] 2026-03-10 22:30:42,427 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 23:31:11] 2026-03-10 22:31:00,192 | INFO     | [monitor] cgroup control has ended
[2026-03-10 23:31:11] 2026-03-10 22:31:01,121 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139913760282432)>', '<ExcThread(monitor, started 139913173391104)>']
[2026-03-10 23:31:11] 2026-03-10 22:31:01,540 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 23:31:11] 2026-03-10 22:31:01,541 | INFO     | [monitor] control thread has ended
[2026-03-10 23:31:11] 2026-03-10 22:31:06,146 | INFO     | all workflow threads have been joined
[2026-03-10 23:31:11] 2026-03-10 22:31:06,147 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 23:31:11] 2026-03-10 22:31:06,147 | INFO     | traces error code: 0
[2026-03-10 23:31:11] 2026-03-10 22:31:06,147 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 23:31:11] 2026-03-10 22:31:06,432 [wrapper] ==== pilot stdout END ====
[2026-03-10 23:31:11] 2026-03-10 22:31:06,521 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 23:31:11] 2026-03-10 22:31:06,635 [wrapper] pilotpid: 31011
[2026-03-10 23:31:11] 2026-03-10 22:31:06,744 [wrapper] Pilot exit status: 0
[2026-03-10 23:31:11] 2026-03-10 22:31:07,219 [wrapper] pandaids: 7048426455
[2026-03-10 23:31:11] 2026-03-10 22:31:08,242 [wrapper] cleanup supervisor_pilot 25073 31012
[2026-03-10 23:31:11] 2026-03-10 22:31:08,348 [wrapper] Test setup, not cleaning
[2026-03-10 23:31:11] 2026-03-10 22:31:08,471 [wrapper] apfmon messages muted
[2026-03-10 23:31:11] 2026-03-10 22:31:08,595 [wrapper] ==== wrapper stdout END ====
[2026-03-10 23:31:11] 2026-03-10 22:31:08,700 [wrapper] ==== wrapper stderr END ====
[2026-03-10 23:31:11]  *** Error codes and diagnostics ***
[2026-03-10 23:31:11]     "exeErrorCode": 0,
[2026-03-10 23:31:11]     "exeErrorDiag": "",
[2026-03-10 23:31:11]     "pilotErrorCode": 0,
[2026-03-10 23:31:11]     "pilotErrorDiag": "",
[2026-03-10 23:31:11]  *** Listing of results directory ***
[2026-03-10 23:31:11] total 562148
[2026-03-10 23:31:11] -rw-r--r--. 1 boinc boinc    584627 Mar 10 07:40 pilot3.tar.gz
[2026-03-10 23:31:11] -rw-r--r--. 1 boinc boinc      5111 Mar 10 07:41 queuedata.json
[2026-03-10 23:31:11] -rwx------. 1 boinc boinc     36322 Mar 10 07:41 runpilot2-wrapper.sh
[2026-03-10 23:31:11] -rw-r--r--. 1 boinc boinc       100 Mar 10 19:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 23:31:11] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 19:14 run_atlas
[2026-03-10 23:31:11] -rw-r--r--. 1 boinc boinc       105 Mar 10 19:14 job.xml
[2026-03-10 23:31:11] -rw-r--r--. 1 boinc boinc      6392 Mar 10 19:14 init_data.xml
[2026-03-10 23:31:11] -rw-r--r--. 2 boinc boinc 329068978 Mar 10 19:14 EVNT.48997945._000074.pool.root.1
[2026-03-10 23:31:11] -rw-r--r--. 2 boinc boinc     15845 Mar 10 19:14 start_atlas.sh
[2026-03-10 23:31:11] drwxrwx--x. 2 boinc boinc        68 Mar 10 19:14 shared
[2026-03-10 23:31:11] -rw-r--r--. 2 boinc boinc    597963 Mar 10 19:14 input.tar.gz
[2026-03-10 23:31:11] -rw-r--r--. 1 boinc boinc         0 Mar 10 19:14 boinc_lockfile
[2026-03-10 23:31:11] -rw-r--r--. 1 boinc boinc      2571 Mar 10 19:15 pandaJob.out
[2026-03-10 23:31:11] -rw-------. 1 boinc boinc       415 Mar 10 19:21 workernode_map.json
[2026-03-10 23:31:11] -rw-------. 1 boinc boinc   1006644 Mar 10 19:21 agis_schedconf.cvmfs.json
[2026-03-10 23:31:11] drwx------. 5 boinc boinc      4096 Mar 10 19:21 pilot3
[2026-03-10 23:31:11] -rw-------. 1 boinc boinc 237522741 Mar 10 23:28 HITS.48997948._001892.pool.root.1
[2026-03-10 23:31:11] -rw-r--r--. 1 boinc boinc       530 Mar 10 23:28 boinc_task_state.xml
[2026-03-10 23:31:11] -rw-------. 1 boinc boinc      1023 Mar 10 23:29 memory_monitor_summary.json
[2026-03-10 23:31:11] -rw-------. 1 boinc boinc   1511578 Mar 10 23:30 agis_ddmendpoints.agis.ALL.json
[2026-03-10 23:31:11] -rw-------. 1 boinc boinc    460119 Mar 10 23:30 log.48997948._001892.job.log.tgz.1
[2026-03-10 23:31:11] -rw-------. 1 boinc boinc        95 Mar 10 23:30 pilot_heartbeat.json
[2026-03-10 23:31:11] -rw-------. 1 boinc boinc      6324 Mar 10 23:30 heartbeat.json
[2026-03-10 23:31:11] -rw-r--r--. 1 boinc boinc      8192 Mar 10 23:30 boinc_mmap_file
[2026-03-10 23:31:11] -rw-r--r--. 1 boinc boinc        28 Mar 10 23:30 wrapper_checkpoint.txt
[2026-03-10 23:31:11] -rw-------. 1 boinc boinc      5067 Mar 10 23:31 pilotlog.txt
[2026-03-10 23:31:11] -rw-------. 1 boinc boinc   2104200 Mar 10 23:31 log.48997948._001892.job.log.1
[2026-03-10 23:31:11] -rw-------. 1 boinc boinc       357 Mar 10 23:31 output.list
[2026-03-10 23:31:11] -rw-r--r--. 1 boinc boinc       620 Mar 10 23:31 runtime_log
[2026-03-10 23:31:11] -rw-------. 1 boinc boinc   2580480 Mar 10 23:31 result.tar.gz
[2026-03-10 23:31:11] -rw-r--r--. 1 boinc boinc      8832 Mar 10 23:31 runtime_log.err
[2026-03-10 23:31:11] -rw-------. 1 boinc boinc       656 Mar 10 23:31 q6JMDmAy5J9n9Rq4apOajLDm4fhM0noT9bVooX4SDmkXcLDm1Febgm.diag
[2026-03-10 23:31:11] -rw-r--r--. 1 boinc boinc     20742 Mar 10 23:31 stderr.txt
[2026-03-10 23:31:11] HITS file was successfully produced:
[2026-03-10 23:31:11] -rw-------. 1 boinc boinc 237522741 Mar 10 23:28 shared/HITS.pool.root.1
[2026-03-10 23:31:11]  *** Contents of shared directory: ***
[2026-03-10 23:31:11] total 556436
[2026-03-10 23:31:11] -rw-r--r--. 2 boinc boinc 329068978 Mar 10 19:14 ATLAS.root_0
[2026-03-10 23:31:11] -rw-r--r--. 2 boinc boinc     15845 Mar 10 19:14 start_atlas.sh
[2026-03-10 23:31:11] -rw-r--r--. 2 boinc boinc    597963 Mar 10 19:14 input.tar.gz
[2026-03-10 23:31:11] -rw-------. 1 boinc boinc 237522741 Mar 10 23:28 HITS.pool.root.1
[2026-03-10 23:31:11] -rw-------. 1 boinc boinc   2580480 Mar 10 23:31 result.tar.gz
23:31:13 (26981): run_atlas exited; CPU time 70465.143911
23:31:13 (26981): called boinc_finish(0)

</stderr_txt>
]]>

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