Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:13:37 (864247): wrapper (7.7.26015): starting
07:13:37 (864247): wrapper: running run_atlas (--nthreads 2)
[2026-03-11 07:13:37] Arguments: --nthreads 2
[2026-03-11 07:13:37] Threads: 2
[2026-03-11 07:13:37] Checking for CVMFS
[2026-03-11 07:13:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 07:13:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 07:13:37] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 07:13:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 07:13:37] 2.9.2.0 3296841 19502 66468 157144 1 50 26072831 36864001 0 130560 0 4981912 99.973 719813 12848 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-11 07:13:37] CVMFS is ok
[2026-03-11 07:13:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 07:13:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-11 07:13:37] Further information can be found at the LHC@home message board.
[2026-03-11 07:13:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 07:13:37] Checking for apptainer binary...
[2026-03-11 07:13:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 07:13:37] Running /usr/bin/apptainer --version
[2026-03-11 07:13:37] apptainer version 1.4.1-1.1
[2026-03-11 07:13:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 07:13:37] thA354
[2026-03-11 07:13:37] apptainer works
[2026-03-11 07:13:37] Set ATHENA_PROC_NUMBER=2
[2026-03-11 07:13:37] Set ATHENA_CORE_NUMBER=2
[2026-03-11 07:13:37] Starting ATLAS job with PandaID=7048425577
[2026-03-11 07:13:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 10:00:37]  *** The last 200 lines of the pilot log: ***
[2026-03-11 10:00:37] 2026-03-11 09:00:04,918 | INFO     | PID=868275 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-11 10:00:37] 2026-03-11 09:00:05,449 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-11 10:00:37] 2026-03-11 09:00:05,575 | INFO     | job 7048425577 has state=finished
[2026-03-11 10:00:37] 2026-03-11 09:00:05,575 | INFO     | preparing for final server update for job 7048425577 in state='finished'
[2026-03-11 10:00:37] 2026-03-11 09:00:05,575 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-7048425577/jobReport.json
[2026-03-11 10:00:37] 2026-03-11 09:00:05,579 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-03-11 10:00:37] 2026-03-11 09:00:05,579 | INFO     | this job has now completed (state=finished)
[2026-03-11 10:00:37] 2026-03-11 09:00:05,579 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-11 10:00:37] 2026-03-11 09:00:05,579 | INFO     | log transfer has been attempted: DONE
[2026-03-11 10:00:37] 2026-03-11 09:00:05,579 | INFO     | job 7048425577 has finished - writing final server update
[2026-03-11 10:00:37] 2026-03-11 09:00:05,580 | INFO     | total number of processed events: 400 (read)
[2026-03-11 10:00:37] 2026-03-11 09:00:05,580 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-7048425577/memory_monitor_summary.json (trf name=prmon)
[2026-03-11 10:00:37] 2026-03-11 09:00:05,580 | INFO     | extracted standard info from prmon json
[2026-03-11 10:00:37] 2026-03-11 09:00:05,580 | INFO     | extracted standard memory fields from prmon json
[2026-03-11 10:00:37] 2026-03-11 09:00:05,580 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-11 10:00:37] 2026-03-11 09:00:05,581 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-11 10:00:37] 2026-03-11 09:00:05,581 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-11 10:00:37] 2026-03-11 09:00:05,582 | INFO     | fitting pss+swap vs Time
[2026-03-11 10:00:37] 2026-03-11 09:00:05,582 | INFO     | sum of square deviations: 1342841922.0
[2026-03-11 10:00:37] 2026-03-11 09:00:05,582 | INFO     | sum of deviations: 2786823307.9999976
[2026-03-11 10:00:37] 2026-03-11 09:00:05,582 | INFO     | mean x: 1773214603.0
[2026-03-11 10:00:37] 2026-03-11 09:00:05,582 | INFO     | mean y: 2331523.8343558284
[2026-03-11 10:00:37] 2026-03-11 09:00:05,582 | INFO     | intersect: -3677651730.1635504
[2026-03-11 10:00:37] 2026-03-11 09:00:05,582 | INFO     | chi2: 1.816698365474252
[2026-03-11 10:00:37] 2026-03-11 09:00:05,582 | INFO     | sum of square deviations: 1223016419.5
[2026-03-11 10:00:37] 2026-03-11 09:00:05,583 | INFO     | sum of deviations: 2994631062.4999957
[2026-03-11 10:00:37] 2026-03-11 09:00:05,583 | INFO     | mean x: 1773214450.5
[2026-03-11 10:00:37] 2026-03-11 09:00:05,583 | INFO     | mean y: 2331788.335443038
[2026-03-11 10:00:37] 2026-03-11 09:00:05,583 | INFO     | intersect: -4339493054.958217
[2026-03-11 10:00:37] 2026-03-11 09:00:05,583 | INFO     | chi2: 1.8180842530238235
[2026-03-11 10:00:37] 2026-03-11 09:00:05,583 | INFO     | current chi2=1.8180842530238235 (change=-0.07628605694318423 %)
[2026-03-11 10:00:37] 2026-03-11 09:00:05,583 | INFO     | right removable region: 157
[2026-03-11 10:00:37] 2026-03-11 09:00:05,583 | INFO     | sum of square deviations: 1223016419.5
[2026-03-11 10:00:37] 2026-03-11 09:00:05,583 | INFO     | sum of deviations: -23196616949.0
[2026-03-11 10:00:37] 2026-03-11 09:00:05,583 | INFO     | mean x: 1773214755.5
[2026-03-11 10:00:37] 2026-03-11 09:00:05,584 | INFO     | mean y: 2364149.253164557
[2026-03-11 10:00:37] 2026-03-11 09:00:05,584 | INFO     | intersect: 33634442014.94873
[2026-03-11 10:00:37] 2026-03-11 09:00:05,584 | INFO     | chi2: 0.05965033264047057
[2026-03-11 10:00:37] 2026-03-11 09:00:05,584 | INFO     | current chi2=0.05965033264047057 (change=96.71655274347656 %)
[2026-03-11 10:00:37] 2026-03-11 09:00:05,584 | INFO     | sum of square deviations: 1110539892.0
[2026-03-11 10:00:37] 2026-03-11 09:00:05,584 | INFO     | sum of deviations: -21301069215.999977
[2026-03-11 10:00:37] 2026-03-11 09:00:05,584 | INFO     | mean x: 1773214908.0
[2026-03-11 10:00:37] 2026-03-11 09:00:05,584 | INFO     | mean y: 2361573.908496732
[2026-03-11 10:00:37] 2026-03-11 09:00:05,584 | INFO     | intersect: 34014083045.820316
[2026-03-11 10:00:37] 2026-03-11 09:00:05,584 | INFO     | chi2: 0.05949840062566958
[2026-03-11 10:00:37] 2026-03-11 09:00:05,584 | INFO     | current chi2=0.05949840062566958 (change=0.2547043881829318 %)
[2026-03-11 10:00:37] 2026-03-11 09:00:05,584 | INFO     | left removable region: 20
[2026-03-11 10:00:37] 2026-03-11 09:00:05,584 | INFO     | sum of square deviations: 797291228.0
[2026-03-11 10:00:37] 2026-03-11 09:00:05,585 | INFO     | sum of deviations: -15738423889.0
[2026-03-11 10:00:37] 2026-03-11 09:00:05,585 | INFO     | mean x: 1773215030.0
[2026-03-11 10:00:37] 2026-03-11 09:00:05,585 | INFO     | mean y: 2355849.8467153283
[2026-03-11 10:00:37] 2026-03-11 09:00:05,585 | INFO     | intersect: 35005387124.24304
[2026-03-11 10:00:37] 2026-03-11 09:00:05,585 | INFO     | chi2: 0.056107099186992054
[2026-03-11 10:00:37] 2026-03-11 09:00:05,585 | INFO     | current memory leak: -19.74 B/s (using 137 data points, chi2=0.06)
[2026-03-11 10:00:37] 2026-03-11 09:00:05,585 | INFO     | could have reported an average CPU frequency of 4528 MHz (9 samples)
[2026-03-11 10:00:37] 2026-03-11 09:00:05,585 | INFO     | ..............................
[2026-03-11 10:00:37] 2026-03-11 09:00:05,585 | INFO     | . Timing measurements:
[2026-03-11 10:00:37] 2026-03-11 09:00:05,585 | INFO     | . get job = 0 s
[2026-03-11 10:00:37] 2026-03-11 09:00:05,585 | INFO     | . initial setup = 7 s
[2026-03-11 10:00:37] 2026-03-11 09:00:05,585 | INFO     | . payload setup = 8 s
[2026-03-11 10:00:37] 2026-03-11 09:00:05,585 | INFO     | . stage-in = 0 s
[2026-03-11 10:00:37] 2026-03-11 09:00:05,585 | INFO     | . payload execution = 9938 s
[2026-03-11 10:00:37] 2026-03-11 09:00:05,585 | INFO     | . stage-out = 0 s
[2026-03-11 10:00:37] 2026-03-11 09:00:05,585 | INFO     | . log creation = 0 s
[2026-03-11 10:00:37] 2026-03-11 09:00:05,585 | INFO     | ..............................
[2026-03-11 10:00:37] 2026-03-11 09:00:05,613 | INFO     | 
[2026-03-11 10:00:37] 2026-03-11 09:00:05,613 | INFO     | job summary report
[2026-03-11 10:00:37] 2026-03-11 09:00:05,613 | INFO     | --------------------------------------------------
[2026-03-11 10:00:37] 2026-03-11 09:00:05,613 | INFO     | PanDA job id: 7048425577
[2026-03-11 10:00:37] 2026-03-11 09:00:05,613 | INFO     | task id: 48997948
[2026-03-11 10:00:37] 2026-03-11 09:00:05,613 | INFO     | errors: (none)
[2026-03-11 10:00:37] 2026-03-11 09:00:05,613 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-11 10:00:37] 2026-03-11 09:00:05,613 | INFO     | pilot state: finished 
[2026-03-11 10:00:37] 2026-03-11 09:00:05,613 | INFO     | transexitcode: 0
[2026-03-11 10:00:37] 2026-03-11 09:00:05,613 | INFO     | exeerrorcode: 0
[2026-03-11 10:00:37] 2026-03-11 09:00:05,613 | INFO     | exeerrordiag: 
[2026-03-11 10:00:37] 2026-03-11 09:00:05,613 | INFO     | exitcode: 0
[2026-03-11 10:00:37] 2026-03-11 09:00:05,613 | INFO     | exitmsg: OK
[2026-03-11 10:00:37] 2026-03-11 09:00:05,613 | INFO     | cpuconsumptiontime: 19438 s
[2026-03-11 10:00:37] 2026-03-11 09:00:05,613 | INFO     | nevents: 400
[2026-03-11 10:00:37] 2026-03-11 09:00:05,613 | INFO     | neventsw: 0
[2026-03-11 10:00:37] 2026-03-11 09:00:05,613 | INFO     | pid: 872684
[2026-03-11 10:00:37] 2026-03-11 09:00:05,614 | INFO     | pgrp: 872684
[2026-03-11 10:00:37] 2026-03-11 09:00:05,614 | INFO     | corecount: 2
[2026-03-11 10:00:37] 2026-03-11 09:00:05,614 | INFO     | event service: False
[2026-03-11 10:00:37] 2026-03-11 09:00:05,614 | INFO     | sizes: {0: 2280250, 10: 2280250, 9951: 2308985, 9953: 2317989, 9956: 2318303}
[2026-03-11 10:00:37] 2026-03-11 09:00:05,614 | INFO     | --------------------------------------------------
[2026-03-11 10:00:37] 2026-03-11 09:00:05,614 | INFO     | 
[2026-03-11 10:00:37] 2026-03-11 09:00:05,614 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-03-11 10:00:37] 2026-03-11 09:00:05,625 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-11 10:00:37] 2026-03-11 09:00:05,625 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-11 10:00:37] 2026-03-11 09:00:05,625 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-11 10:00:37] 2026-03-11 09:00:05,625 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-11 10:00:37] 2026-03-11 09:00:05,625 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-11 10:00:37] 2026-03-11 09:00:05,625 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-11 10:00:37] 2026-03-11 09:00:05,625 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-11 10:00:37] 2026-03-11 09:00:05,625 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-11 10:00:37] 2026-03-11 09:00:05,625 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-11 10:00:37] 2026-03-11 09:00:05,625 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-11 10:00:37] 2026-03-11 09:00:05,625 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-11 10:00:37] 2026-03-11 09:00:05,625 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-11 10:00:37] 2026-03-11 09:00:05,625 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-11 10:00:37] 2026-03-11 09:00:05,625 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-11 10:00:37] 2026-03-11 09:00:05,625 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-11 10:00:37] 2026-03-11 09:00:05,625 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-11 10:00:37] 2026-03-11 09:00:05,625 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-11 10:00:37] 2026-03-11 09:00:05,625 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-11 10:00:37] 2026-03-11 09:00:05,625 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-11 10:00:37] 2026-03-11 09:00:05,625 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-11 10:00:37] 2026-03-11 09:00:05,626 | INFO     | job 7048425577 has completed (purged errors)
[2026-03-11 10:00:37] 2026-03-11 09:00:05,626 | INFO     | overall cleanup function is called
[2026-03-11 10:00:37] 2026-03-11 09:00:06,632 | INFO     | --- collectZombieJob: --- 10, [872684]
[2026-03-11 10:00:37] 2026-03-11 09:00:06,632 | INFO     | zombie collector waiting for pid 872684
[2026-03-11 10:00:37] 2026-03-11 09:00:06,632 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-11 10:00:37] 2026-03-11 09:00:06,633 | INFO     | collected zombie processes
[2026-03-11 10:00:37] 2026-03-11 09:00:06,633 | INFO     | will attempt to kill all subprocesses of pid=872684
[2026-03-11 10:00:37] 2026-03-11 09:00:06,669 | INFO     | process IDs to be killed: [872684] (in reverse order)
[2026-03-11 10:00:37] 2026-03-11 09:00:06,691 | WARNING  | found no corresponding commands to process id(s)
[2026-03-11 10:00:37] 2026-03-11 09:00:06,691 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-11 10:00:37] 2026-03-11 09:00:06,692 | INFO     | did not find any defunct processes belonging to 872684
[2026-03-11 10:00:37] 2026-03-11 09:00:06,693 | INFO     | did not find any defunct processes belonging to 872684
[2026-03-11 10:00:37] 2026-03-11 09:00:06,693 | INFO     | ready for new job
[2026-03-11 10:00:37] 2026-03-11 09:00:06,693 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-11 10:00:37] 2026-03-11 09:00:06,693 | INFO     | **************************************
[2026-03-11 10:00:37] 2026-03-11 09:00:06,693 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-11 10:00:37] 2026-03-11 09:00:06,693 | INFO     | **************************************
[2026-03-11 10:00:37] 2026-03-11 09:00:06,693 | INFO     | 
[2026-03-11 10:00:37] 2026-03-11 09:00:06,694 | INFO     | architecture information:
[2026-03-11 10:00:37] 2026-03-11 09:00:06,694 | INFO     | executing command: cat /etc/os-release
[2026-03-11 10:00:37] 2026-03-11 09:00:06,702 | INFO     | cat /etc/os-release:
[2026-03-11 10:00:37] NAME="CentOS Linux"
[2026-03-11 10:00:37] VERSION="7 (Core)"
[2026-03-11 10:00:37] ID="centos"
[2026-03-11 10:00:37] ID_LIKE="rhel fedora"
[2026-03-11 10:00:37] VERSION_ID="7"
[2026-03-11 10:00:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-11 10:00:37] ANSI_COLOR="0;31"
[2026-03-11 10:00:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-11 10:00:37] HOME_URL="https://www.centos.org/"
[2026-03-11 10:00:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-11 10:00:37] 
[2026-03-11 10:00:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-11 10:00:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-11 10:00:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-11 10:00:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-11 10:00:37] 
[2026-03-11 10:00:37] 2026-03-11 09:00:06,702 | INFO     | **************************************
[2026-03-11 10:00:37] 2026-03-11 09:00:07,205 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-11 10:00:37] 2026-03-11 09:00:07,239 | INFO     | sufficient remaining disk space (495987982336 B)
[2026-03-11 10:00:37] 2026-03-11 09:00:07,240 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-11 10:00:37] 2026-03-11 09:00:07,240 | INFO     | current server update state: UPDATING_FINAL
[2026-03-11 10:00:37] 2026-03-11 09:00:07,240 | INFO     | update_server=False
[2026-03-11 10:00:37] 2026-03-11 09:00:07,241 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-11 10:00:37] 2026-03-11 09:00:07,241 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 10:00:37] 2026-03-11 09:00:07,242 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 10:00:37] 2026-03-11 09:00:07,400 | INFO     | all payload control threads have been joined
[2026-03-11 10:00:37] 2026-03-11 09:00:07,684 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-11 10:00:37] 2026-03-11 09:00:07,684 | INFO     | aborting loop
[2026-03-11 10:00:37] 2026-03-11 09:00:07,850 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 10:00:37] 2026-03-11 09:00:07,891 | INFO     | all job control threads have been joined
[2026-03-11 10:00:37] 2026-03-11 09:00:08,190 | INFO     | all data control threads have been joined
[2026-03-11 10:00:37] 2026-03-11 09:00:08,246 | INFO     | [job] retrieve thread has finished
[2026-03-11 10:00:37] 2026-03-11 09:00:08,247 | INFO     | [job] queue monitor thread has finished
[2026-03-11 10:00:37] 2026-03-11 09:00:08,404 | INFO     | [payload] control thread has finished
[2026-03-11 10:00:37] 2026-03-11 09:00:08,690 | INFO     | [job] job monitor thread has finished
[2026-03-11 10:00:37] 2026-03-11 09:00:08,892 | INFO     | [job] control thread has finished
[2026-03-11 10:00:37] 2026-03-11 09:00:09,053 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 10:00:37] 2026-03-11 09:00:09,193 | INFO     | [data] control thread has finished
[2026-03-11 10:00:37] 2026-03-11 09:00:09,420 | INFO     | [job] validate thread has finished
[2026-03-11 10:00:37] 2026-03-11 09:00:09,449 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 10:00:37] 2026-03-11 09:00:09,450 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 10:00:37] 2026-03-11 09:00:09,590 | INFO     | [payload] validate_post thread has finished
[2026-03-11 10:00:37] 2026-03-11 09:00:09,723 | INFO     | [data] copytool_in thread has finished
[2026-03-11 10:00:37] 2026-03-11 09:00:09,753 | INFO     | [payload] failed_post thread has finished
[2026-03-11 10:00:37] 2026-03-11 09:00:09,856 | INFO     | [data] copytool_out thread has finished
[2026-03-11 10:00:37] 2026-03-11 09:00:11,248 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 10:00:37] 2026-03-11 09:00:13,626 | INFO     | [monitor] cgroup control has ended
[2026-03-11 10:00:37] 2026-03-11 09:00:18,111 | INFO     | job.realtimelogging is not enabled
[2026-03-11 10:00:37] 2026-03-11 09:00:19,117 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 10:00:37] 2026-03-11 09:00:20,282 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139886907463488)>', '<ExcThread(monitor, started 139886262736640)>']
[2026-03-11 10:00:37] 2026-03-11 09:00:25,307 | INFO     | all workflow threads have been joined
[2026-03-11 10:00:37] 2026-03-11 09:00:25,308 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 10:00:37] 2026-03-11 09:00:25,308 | INFO     | traces error code: 0
[2026-03-11 10:00:37] 2026-03-11 09:00:25,309 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 10:00:37] 2026-03-11 09:00:37,051 | INFO     | PID=868275 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-11 10:00:37] 2026-03-11 09:00:37,051 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 10:00:37] 2026-03-11 09:00:37,051 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 10:00:37] 2026-03-11 09:00:37,051 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 10:00:37] 2026-03-11 09:00:37,051 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 10:00:37] 2026-03-11 09:00:37,051 | INFO     | [monitor] control thread has ended
[2026-03-11 10:00:37] 2026-03-11 09:00:37,092 [wrapper] ==== pilot stdout END ====
[2026-03-11 10:00:37] 2026-03-11 09:00:37,094 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 10:00:37] 2026-03-11 09:00:37,096 [wrapper] pilotpid: 868275
[2026-03-11 10:00:37] 2026-03-11 09:00:37,099 [wrapper] Pilot exit status: 0
[2026-03-11 10:00:37] 2026-03-11 09:00:37,104 [wrapper] pandaids: 7048425577
[2026-03-11 10:00:37] 2026-03-11 09:00:37,117 [wrapper] cleanup supervisor_pilot  878391 868276
[2026-03-11 10:00:37] 2026-03-11 09:00:37,119 [wrapper] Test setup, not cleaning
[2026-03-11 10:00:37] 2026-03-11 09:00:37,121 [wrapper] apfmon messages muted
[2026-03-11 10:00:37] 2026-03-11 09:00:37,123 [wrapper] ==== wrapper stdout END ====
[2026-03-11 10:00:37] 2026-03-11 09:00:37,124 [wrapper] ==== wrapper stderr END ====
[2026-03-11 10:00:37]  *** Error codes and diagnostics ***
[2026-03-11 10:00:37]     "exeErrorCode": 0,
[2026-03-11 10:00:37]     "exeErrorDiag": "",
[2026-03-11 10:00:37]     "pilotErrorCode": 0,
[2026-03-11 10:00:37]     "pilotErrorDiag": "",
[2026-03-11 10:00:37]  *** Listing of results directory ***
[2026-03-11 10:00:37] total 555524
[2026-03-11 10:00:37] -rw-r--r-- 1 boinc boinc    584627 Mar 10 07:40 pilot3.tar.gz
[2026-03-11 10:00:37] -rw-r--r-- 1 boinc boinc      5111 Mar 10 07:41 queuedata.json
[2026-03-11 10:00:37] -rwx------ 1 boinc boinc     36322 Mar 10 07:41 runpilot2-wrapper.sh
[2026-03-11 10:00:37] -rw-r--r-- 1 boinc boinc       100 Mar 11 07:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 10:00:37] -rwxr-xr-x 1 boinc boinc      7986 Mar 11 07:13 run_atlas
[2026-03-11 10:00:37] -rw-r--r-- 1 boinc boinc       105 Mar 11 07:13 job.xml
[2026-03-11 10:00:37] -rw-r--r-- 2 boinc boinc 321556144 Mar 11 07:13 EVNT.48997945._000067.pool.root.1
[2026-03-11 10:00:37] -rw-r--r-- 2 boinc boinc    597953 Mar 11 07:13 input.tar.gz
[2026-03-11 10:00:37] -rw-r--r-- 2 boinc boinc     15845 Mar 11 07:13 start_atlas.sh
[2026-03-11 10:00:37] drwxrwx--x 2 boinc boinc      4096 Mar 11 07:13 shared
[2026-03-11 10:00:37] -rw-r--r-- 1 boinc boinc         0 Mar 11 07:13 boinc_setup_complete
[2026-03-11 10:00:37] -rw-r--r-- 1 boinc boinc      6205 Mar 11 07:13 init_data.xml
[2026-03-11 10:00:37] -rw-r--r-- 1 boinc boinc         0 Mar 11 07:13 boinc_lockfile
[2026-03-11 10:00:37] -rw-r--r-- 1 boinc boinc      2571 Mar 11 07:13 pandaJob.out
[2026-03-11 10:00:37] -rw------- 1 boinc boinc   1006644 Mar 11 07:13 agis_schedconf.cvmfs.json
[2026-03-11 10:00:37] -rw------- 1 boinc boinc   1511578 Mar 11 07:13 agis_ddmendpoints.agis.ALL.json
[2026-03-11 10:00:37] -rw------- 1 boinc boinc       418 Mar 11 07:13 workernode_map.json
[2026-03-11 10:00:37] drwx------ 5 boinc boinc      4096 Mar 11 07:13 pilot3
[2026-03-11 10:00:37] -rw------- 1 boinc boinc 239885622 Mar 11 09:59 HITS.48997948._001737.pool.root.1
[2026-03-11 10:00:37] -rw-r--r-- 1 boinc boinc       529 Mar 11 09:59 boinc_task_state.xml
[2026-03-11 10:00:37] -rw------- 1 boinc boinc      1016 Mar 11 09:59 memory_monitor_summary.json
[2026-03-11 10:00:37] -rw------- 1 boinc boinc    325476 Mar 11 10:00 log.48997948._001737.job.log.tgz.1
[2026-03-11 10:00:37] -rw------- 1 boinc boinc      6295 Mar 11 10:00 heartbeat.json
[2026-03-11 10:00:37] -rw-r--r-- 1 boinc boinc      8192 Mar 11 10:00 boinc_mmap_file
[2026-03-11 10:00:37] -rw-r--r-- 1 boinc boinc        28 Mar 11 10:00 wrapper_checkpoint.txt
[2026-03-11 10:00:37] -rw------- 1 boinc boinc       746 Mar 11 10:00 pilotlog.txt
[2026-03-11 10:00:37] -rw------- 1 boinc boinc        95 Mar 11 10:00 pilot_heartbeat.json
[2026-03-11 10:00:37] -rw------- 1 boinc boinc   1413693 Mar 11 10:00 log.48997948._001737.job.log.1
[2026-03-11 10:00:37] -rw------- 1 boinc boinc       357 Mar 11 10:00 output.list
[2026-03-11 10:00:37] -rw-r--r-- 1 boinc boinc       620 Mar 11 10:00 runtime_log
[2026-03-11 10:00:37] -rw------- 1 boinc boinc   1761280 Mar 11 10:00 result.tar.gz
[2026-03-11 10:00:37] -rw-r--r-- 1 boinc boinc      8897 Mar 11 10:00 runtime_log.err
[2026-03-11 10:00:37] -rw------- 1 boinc boinc       660 Mar 11 10:00 6tLLDm2x5J9n9Rq4apOajLDm4fhM0noT9bVooX4SDm8VcLDmzxkuvm.diag
[2026-03-11 10:00:37] -rw-r--r-- 1 boinc boinc     21331 Mar 11 10:00 stderr.txt
[2026-03-11 10:00:37] HITS file was successfully produced:
[2026-03-11 10:00:37] -rw------- 1 boinc boinc 239885622 Mar 11 09:59 shared/HITS.pool.root.1
[2026-03-11 10:00:37]  *** Contents of shared directory: ***
[2026-03-11 10:00:37] total 550612
[2026-03-11 10:00:37] -rw-r--r-- 2 boinc boinc 321556144 Mar 11 07:13 ATLAS.root_0
[2026-03-11 10:00:37] -rw-r--r-- 2 boinc boinc    597953 Mar 11 07:13 input.tar.gz
[2026-03-11 10:00:37] -rw-r--r-- 2 boinc boinc     15845 Mar 11 07:13 start_atlas.sh
[2026-03-11 10:00:37] -rw------- 1 boinc boinc 239885622 Mar 11 09:59 HITS.pool.root.1
[2026-03-11 10:00:37] -rw------- 1 boinc boinc   1761280 Mar 11 10:00 result.tar.gz
10:00:38 (864247): run_atlas exited; CPU time 19487.615592
10:00:38 (864247): called boinc_finish(0)

</stderr_txt>
]]>

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