Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
02:49:15 (127531): wrapper (7.7.26015): starting
02:49:15 (127531): wrapper: running run_atlas (--nthreads 3)
[2026-03-11 02:49:15] Arguments: --nthreads 3
[2026-03-11 02:49:15] Threads: 3
[2026-03-11 02:49:15] Checking for CVMFS
[2026-03-11 02:49:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 02:49:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 02:49:16] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 02:49:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 02:49:16] 2.9.2.0 4126582 557 61420 157137 0 50 25900626 36864001 0 130560 0 235324 99.981 21918 6949 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-11 02:49:16] CVMFS is ok
[2026-03-11 02:49:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 02:49:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-11 02:49:16] Further information can be found at the LHC@home message board.
[2026-03-11 02:49:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 02:49:16] Checking for apptainer binary...
[2026-03-11 02:49:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 02:49:16] Running /usr/bin/apptainer --version
[2026-03-11 02:49:16] apptainer version 1.4.1-1.1
[2026-03-11 02:49:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 02:49:16] thA363a
[2026-03-11 02:49:16] apptainer works
[2026-03-11 02:49:16] Set ATHENA_PROC_NUMBER=3
[2026-03-11 02:49:16] Set ATHENA_CORE_NUMBER=3
[2026-03-11 02:49:16] Starting ATLAS job with PandaID=7035717336
[2026-03-11 02:49:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 04:28:39]  *** The last 200 lines of the pilot log: ***
[2026-03-11 04:28:39]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-11 04:28:39]  is_altstaged=None
[2026-03-11 04:28:39]  is_tar=False
[2026-03-11 04:28:39]  lfn=log.48838416._010150.job.log.tgz.1
[2026-03-11 04:28:39]  mtime=0
[2026-03-11 04:28:39]  protocol_id=None
[2026-03-11 04:28:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-11 04:28:39]  replicas=None
[2026-03-11 04:28:39]  scope=mc23_13p6TeV
[2026-03-11 04:28:39]  status=None
[2026-03-11 04:28:39]  status_code=0
[2026-03-11 04:28:39]  storage_token=
[2026-03-11 04:28:39]  surl=/local/data/boinc/slots/0/PanDA_Pilot-7035717336/log.48838416._010150.job.log.tgz.1
[2026-03-11 04:28:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8f/a6/log.48838416._010150.job.log.tgz.1
[2026-03-11 04:28:39]  workdir=None
[2026-03-11 04:28:39] ]
[2026-03-11 04:28:39] 2026-03-11 03:27:58,790 | INFO     | transferring file log.48838416._010150.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-7035717336/log.48838416._010150.job.log.tgz.1 to /local/data/boinc/
[2026-03-11 04:28:39] 2026-03-11 03:27:58,790 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-7035717336/log.48838416._010150.job.log.tgz.1 /local/data/boinc/slots/0/log.48838416._0101
[2026-03-11 04:28:39] 2026-03-11 03:27:58,804 | INFO     | adding to output.list: log.48838416._010150.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8f/a6/log.48838416._010150.job.log.tg
[2026-03-11 04:28:39] 2026-03-11 03:27:58,805 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-11 04:28:39] 2026-03-11 03:27:58,805 | INFO     | summary of transferred files:
[2026-03-11 04:28:39] 2026-03-11 03:27:58,805 | INFO     |  -- lfn=log.48838416._010150.job.log.tgz.1, status_code=0, status=transferred
[2026-03-11 04:28:39] 2026-03-11 03:27:58,805 | INFO     | stage-out finished correctly
[2026-03-11 04:28:39] 2026-03-11 03:27:58,872 | INFO     | PID=131576 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-11 04:28:39] 2026-03-11 03:27:59,873 | INFO     | time since job start (5913s) is within the limit (349056.0s)
[2026-03-11 04:28:39] 2026-03-11 03:28:00,442 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-11 04:28:39] 2026-03-11 03:28:00,473 | INFO     | job 7035717336 has state=finished
[2026-03-11 04:28:39] 2026-03-11 03:28:00,473 | INFO     | preparing for final server update for job 7035717336 in state='finished'
[2026-03-11 04:28:39] 2026-03-11 03:28:00,474 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-7035717336/jobReport.json
[2026-03-11 04:28:39] 2026-03-11 03:28:00,475 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-03-11 04:28:39] 2026-03-11 03:28:00,475 | INFO     | this job has now completed (state=finished)
[2026-03-11 04:28:39] 2026-03-11 03:28:00,475 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-11 04:28:39] 2026-03-11 03:28:00,475 | INFO     | log transfer has been attempted: DONE
[2026-03-11 04:28:39] 2026-03-11 03:28:00,475 | INFO     | job 7035717336 has finished - writing final server update
[2026-03-11 04:28:39] 2026-03-11 03:28:00,475 | INFO     | total number of processed events: 400 (read)
[2026-03-11 04:28:39] 2026-03-11 03:28:00,476 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-7035717336/memory_monitor_summary.json (trf name=prmon)
[2026-03-11 04:28:39] 2026-03-11 03:28:00,476 | INFO     | extracted standard info from prmon json
[2026-03-11 04:28:39] 2026-03-11 03:28:00,476 | INFO     | extracted standard memory fields from prmon json
[2026-03-11 04:28:39] 2026-03-11 03:28:00,476 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-11 04:28:39] 2026-03-11 03:28:00,476 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-11 04:28:39] 2026-03-11 03:28:00,476 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-11 04:28:39] 2026-03-11 03:28:00,477 | INFO     | fitting pss+swap vs Time
[2026-03-11 04:28:39] 2026-03-11 03:28:00,477 | INFO     | sum of square deviations: 226022842.5
[2026-03-11 04:28:39] 2026-03-11 03:28:00,477 | INFO     | sum of deviations: -16026292374.5
[2026-03-11 04:28:39] 2026-03-11 03:28:00,477 | INFO     | mean x: 1773196802.5
[2026-03-11 04:28:39] 2026-03-11 03:28:00,477 | INFO     | mean y: 2433067.4555555554
[2026-03-11 04:28:39] 2026-03-11 03:28:00,477 | INFO     | intersect: 125732072072.38724
[2026-03-11 04:28:39] 2026-03-11 03:28:00,477 | INFO     | chi2: 0.17991192020665012
[2026-03-11 04:28:39] 2026-03-11 03:28:00,477 | INFO     | current memory leak: -70.91 B/s (using 90 data points, chi2=0.18)
[2026-03-11 04:28:39] 2026-03-11 03:28:00,477 | INFO     | could have reported an average CPU frequency of 3710 MHz (7 samples)
[2026-03-11 04:28:39] 2026-03-11 03:28:00,477 | INFO     | ..............................
[2026-03-11 04:28:39] 2026-03-11 03:28:00,477 | INFO     | . Timing measurements:
[2026-03-11 04:28:39] 2026-03-11 03:28:00,477 | INFO     | . get job = 0 s
[2026-03-11 04:28:39] 2026-03-11 03:28:00,477 | INFO     | . initial setup = 3 s
[2026-03-11 04:28:39] 2026-03-11 03:28:00,478 | INFO     | . payload setup = 2 s
[2026-03-11 04:28:39] 2026-03-11 03:28:00,478 | INFO     | . stage-in = 0 s
[2026-03-11 04:28:39] 2026-03-11 03:28:00,478 | INFO     | . payload execution = 5894 s
[2026-03-11 04:28:39] 2026-03-11 03:28:00,478 | INFO     | . stage-out = 0 s
[2026-03-11 04:28:39] 2026-03-11 03:28:00,478 | INFO     | . log creation = 0 s
[2026-03-11 04:28:39] 2026-03-11 03:28:00,478 | INFO     | ..............................
[2026-03-11 04:28:39] 2026-03-11 03:28:00,503 | INFO     | 
[2026-03-11 04:28:39] 2026-03-11 03:28:00,504 | INFO     | job summary report
[2026-03-11 04:28:39] 2026-03-11 03:28:00,504 | INFO     | --------------------------------------------------
[2026-03-11 04:28:39] 2026-03-11 03:28:00,504 | INFO     | PanDA job id: 7035717336
[2026-03-11 04:28:39] 2026-03-11 03:28:00,504 | INFO     | task id: 48838416
[2026-03-11 04:28:39] 2026-03-11 03:28:00,504 | INFO     | errors: (none)
[2026-03-11 04:28:39] 2026-03-11 03:28:00,504 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-11 04:28:39] 2026-03-11 03:28:00,504 | INFO     | pilot state: finished 
[2026-03-11 04:28:39] 2026-03-11 03:28:00,504 | INFO     | transexitcode: 0
[2026-03-11 04:28:39] 2026-03-11 03:28:00,504 | INFO     | exeerrorcode: 0
[2026-03-11 04:28:39] 2026-03-11 03:28:00,504 | INFO     | exeerrordiag: 
[2026-03-11 04:28:39] 2026-03-11 03:28:00,504 | INFO     | exitcode: 0
[2026-03-11 04:28:39] 2026-03-11 03:28:00,504 | INFO     | exitmsg: OK
[2026-03-11 04:28:39] 2026-03-11 03:28:00,504 | INFO     | cpuconsumptiontime: 17019 s
[2026-03-11 04:28:39] 2026-03-11 03:28:00,504 | INFO     | nevents: 400
[2026-03-11 04:28:39] 2026-03-11 03:28:00,504 | INFO     | neventsw: 0
[2026-03-11 04:28:39] 2026-03-11 03:28:00,504 | INFO     | pid: 136008
[2026-03-11 04:28:39] 2026-03-11 03:28:00,504 | INFO     | pgrp: 136008
[2026-03-11 04:28:39] 2026-03-11 03:28:00,504 | INFO     | corecount: 3
[2026-03-11 04:28:39] 2026-03-11 03:28:00,504 | INFO     | event service: False
[2026-03-11 04:28:39] 2026-03-11 03:28:00,504 | INFO     | sizes: {0: 2280237, 11: 2280237, 5900: 2307099, 5902: 2316103, 5903: 2316353}
[2026-03-11 04:28:39] 2026-03-11 03:28:00,504 | INFO     | --------------------------------------------------
[2026-03-11 04:28:39] 2026-03-11 03:28:00,504 | INFO     | 
[2026-03-11 04:28:39] 2026-03-11 03:28:00,504 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-03-11 04:28:39] 2026-03-11 03:28:00,517 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-11 04:28:39] 2026-03-11 03:28:00,518 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-11 04:28:39] 2026-03-11 03:28:00,518 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-11 04:28:39] 2026-03-11 03:28:00,518 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-11 04:28:39] 2026-03-11 03:28:00,518 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-11 04:28:39] 2026-03-11 03:28:00,518 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-11 04:28:39] 2026-03-11 03:28:00,518 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-11 04:28:39] 2026-03-11 03:28:00,518 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-11 04:28:39] 2026-03-11 03:28:00,518 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-11 04:28:39] 2026-03-11 03:28:00,518 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-11 04:28:39] 2026-03-11 03:28:00,518 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-11 04:28:39] 2026-03-11 03:28:00,518 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-11 04:28:39] 2026-03-11 03:28:00,518 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-11 04:28:39] 2026-03-11 03:28:00,518 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-11 04:28:39] 2026-03-11 03:28:00,518 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-11 04:28:39] 2026-03-11 03:28:00,518 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-11 04:28:39] 2026-03-11 03:28:00,518 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-11 04:28:39] 2026-03-11 03:28:00,518 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-11 04:28:39] 2026-03-11 03:28:00,518 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-11 04:28:39] 2026-03-11 03:28:00,518 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-11 04:28:39] 2026-03-11 03:28:00,518 | INFO     | job 7035717336 has completed (purged errors)
[2026-03-11 04:28:39] 2026-03-11 03:28:00,518 | INFO     | overall cleanup function is called
[2026-03-11 04:28:39] 2026-03-11 03:28:01,525 | INFO     | --- collectZombieJob: --- 10, [136008]
[2026-03-11 04:28:39] 2026-03-11 03:28:01,525 | INFO     | zombie collector waiting for pid 136008
[2026-03-11 04:28:39] 2026-03-11 03:28:01,525 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-11 04:28:39] 2026-03-11 03:28:01,525 | INFO     | collected zombie processes
[2026-03-11 04:28:39] 2026-03-11 03:28:01,525 | INFO     | will attempt to kill all subprocesses of pid=136008
[2026-03-11 04:28:39] 2026-03-11 03:28:01,597 | INFO     | process IDs to be killed: [136008] (in reverse order)
[2026-03-11 04:28:39] 2026-03-11 03:28:01,630 | WARNING  | found no corresponding commands to process id(s)
[2026-03-11 04:28:39] 2026-03-11 03:28:01,631 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-11 04:28:39] 2026-03-11 03:28:01,633 | INFO     | did not find any defunct processes belonging to 136008
[2026-03-11 04:28:39] 2026-03-11 03:28:01,635 | INFO     | did not find any defunct processes belonging to 136008
[2026-03-11 04:28:39] 2026-03-11 03:28:01,635 | INFO     | ready for new job
[2026-03-11 04:28:39] 2026-03-11 03:28:01,635 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-11 04:28:39] 2026-03-11 03:28:01,636 | INFO     | **************************************
[2026-03-11 04:28:39] 2026-03-11 03:28:01,636 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-11 04:28:39] 2026-03-11 03:28:01,636 | INFO     | **************************************
[2026-03-11 04:28:39] 2026-03-11 03:28:01,636 | INFO     | 
[2026-03-11 04:28:39] 2026-03-11 03:28:01,636 | INFO     | architecture information:
[2026-03-11 04:28:39] 2026-03-11 03:28:01,636 | INFO     | executing command: cat /etc/os-release
[2026-03-11 04:28:39] 2026-03-11 03:28:01,646 | INFO     | cat /etc/os-release:
[2026-03-11 04:28:39] NAME="CentOS Linux"
[2026-03-11 04:28:39] VERSION="7 (Core)"
[2026-03-11 04:28:39] ID="centos"
[2026-03-11 04:28:39] ID_LIKE="rhel fedora"
[2026-03-11 04:28:39] VERSION_ID="7"
[2026-03-11 04:28:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-11 04:28:39] ANSI_COLOR="0;31"
[2026-03-11 04:28:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-11 04:28:39] HOME_URL="https://www.centos.org/"
[2026-03-11 04:28:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-11 04:28:39] 
[2026-03-11 04:28:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-11 04:28:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-11 04:28:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-11 04:28:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-11 04:28:39] 
[2026-03-11 04:28:39] 2026-03-11 03:28:01,646 | INFO     | **************************************
[2026-03-11 04:28:39] 2026-03-11 03:28:01,762 | WARNING  | process 136008 can no longer be monitored (due to stat problems) - aborting
[2026-03-11 04:28:39] 2026-03-11 03:28:01,812 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-11 04:28:39] 2026-03-11 03:28:01,876 | INFO     | number of running child processes to parent process 136008: 1
[2026-03-11 04:28:39] 2026-03-11 03:28:01,877 | INFO     | maximum number of monitored processes: 6
[2026-03-11 04:28:39] 2026-03-11 03:28:01,877 | INFO     | aborting job monitoring since job object (job id=7035717336) has expired
[2026-03-11 04:28:39] 2026-03-11 03:28:02,149 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-11 04:28:39] 2026-03-11 03:28:02,163 | INFO     | sufficient remaining disk space (230497976320 B)
[2026-03-11 04:28:39] 2026-03-11 03:28:02,163 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-11 04:28:39] 2026-03-11 03:28:02,164 | INFO     | current server update state: UPDATING_FINAL
[2026-03-11 04:28:39] 2026-03-11 03:28:02,164 | INFO     | update_server=False
[2026-03-11 04:28:39] 2026-03-11 03:28:02,164 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-11 04:28:39] 2026-03-11 03:28:02,164 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 04:28:39] 2026-03-11 03:28:02,164 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 04:28:39] 2026-03-11 03:28:02,164 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 04:28:39] 2026-03-11 03:28:02,164 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-11 04:28:39] 2026-03-11 03:28:02,164 | INFO     | will abort loop
[2026-03-11 04:28:39] 2026-03-11 03:28:02,984 | INFO     | all data control threads have been joined
[2026-03-11 04:28:39] 2026-03-11 03:28:03,062 | INFO     | all payload control threads have been joined
[2026-03-11 04:28:39] 2026-03-11 03:28:03,093 | INFO     | all job control threads have been joined
[2026-03-11 04:28:39] 2026-03-11 03:28:03,166 | INFO     | [job] job monitor thread has finished
[2026-03-11 04:28:39] 2026-03-11 03:28:03,167 | INFO     | [job] queue monitor thread has finished
[2026-03-11 04:28:39] 2026-03-11 03:28:03,169 | INFO     | [job] retrieve thread has finished
[2026-03-11 04:28:39] 2026-03-11 03:28:03,359 | INFO     | job.realtimelogging is not enabled
[2026-03-11 04:28:39] 2026-03-11 03:28:03,664 | INFO     | [payload] failed_post thread has finished
[2026-03-11 04:28:39] 2026-03-11 03:28:03,990 | INFO     | [data] control thread has finished
[2026-03-11 04:28:39] 2026-03-11 03:28:04,068 | INFO     | [payload] control thread has finished
[2026-03-11 04:28:39] 2026-03-11 03:28:04,099 | INFO     | [job] control thread has finished
[2026-03-11 04:28:39] 2026-03-11 03:28:04,170 | INFO     | [data] copytool_out thread has finished
[2026-03-11 04:28:39] 2026-03-11 03:28:04,240 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 04:28:39] 2026-03-11 03:28:04,364 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 04:28:39] 2026-03-11 03:28:04,397 | INFO     | [job] validate thread has finished
[2026-03-11 04:28:39] 2026-03-11 03:28:04,410 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 04:28:39] 2026-03-11 03:28:04,580 | INFO     | [data] copytool_in thread has finished
[2026-03-11 04:28:39] 2026-03-11 03:28:04,589 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 04:28:39] 2026-03-11 03:28:04,677 | INFO     | [payload] validate_post thread has finished
[2026-03-11 04:28:39] 2026-03-11 03:28:06,171 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 04:28:39] 2026-03-11 03:28:32,734 | INFO     | [monitor] cgroup control has ended
[2026-03-11 04:28:39] 2026-03-11 03:28:33,022 | INFO     | PID=131576 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-11 04:28:39] 2026-03-11 03:28:33,022 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 04:28:39] 2026-03-11 03:28:33,022 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 04:28:39] 2026-03-11 03:28:33,022 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 04:28:39] 2026-03-11 03:28:34,704 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139884788758336)>', '<ExcThread(monitor, started 139884434011904)>']
[2026-03-11 04:28:39] 2026-03-11 03:28:35,033 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 04:28:39] 2026-03-11 03:28:35,033 | INFO     | [monitor] control thread has ended
[2026-03-11 04:28:39] 2026-03-11 03:28:39,714 | INFO     | all workflow threads have been joined
[2026-03-11 04:28:39] 2026-03-11 03:28:39,714 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 04:28:39] 2026-03-11 03:28:39,714 | INFO     | traces error code: 0
[2026-03-11 04:28:39] 2026-03-11 03:28:39,714 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 04:28:39] 2026-03-11 03:28:39,764 [wrapper] ==== pilot stdout END ====
[2026-03-11 04:28:39] 2026-03-11 03:28:39,767 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 04:28:39] 2026-03-11 03:28:39,769 [wrapper] pilotpid: 131576
[2026-03-11 04:28:39] 2026-03-11 03:28:39,771 [wrapper] Pilot exit status: 0
[2026-03-11 04:28:39] 2026-03-11 03:28:39,778 [wrapper] pandaids: 7035717336
[2026-03-11 04:28:39] 2026-03-11 03:28:39,800 [wrapper] cleanup supervisor_pilot  144755 131577
[2026-03-11 04:28:39] 2026-03-11 03:28:39,803 [wrapper] Test setup, not cleaning
[2026-03-11 04:28:39] 2026-03-11 03:28:39,805 [wrapper] apfmon messages muted
[2026-03-11 04:28:39] 2026-03-11 03:28:39,807 [wrapper] ==== wrapper stdout END ====
[2026-03-11 04:28:39] 2026-03-11 03:28:39,809 [wrapper] ==== wrapper stderr END ====
[2026-03-11 04:28:39]  *** Error codes and diagnostics ***
[2026-03-11 04:28:39]     "exeErrorCode": 0,
[2026-03-11 04:28:39]     "exeErrorDiag": "",
[2026-03-11 04:28:39]     "pilotErrorCode": 0,
[2026-03-11 04:28:39]     "pilotErrorDiag": "",
[2026-03-11 04:28:39]  *** Listing of results directory ***
[2026-03-11 04:28:39] total 516960
[2026-03-11 04:28:39] -rwx------ 1 boinc boinc     36322 Mar  2 01:56 runpilot2-wrapper.sh
[2026-03-11 04:28:39] -rw-r--r-- 1 boinc boinc      5111 Mar  2 01:56 queuedata.json
[2026-03-11 04:28:39] -rw-r--r-- 1 boinc boinc    584627 Mar  2 01:56 pilot3.tar.gz
[2026-03-11 04:28:39] -rw-r--r-- 1 boinc boinc       100 Mar 11 02:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 04:28:39] -rwxr-xr-x 1 boinc boinc      7986 Mar 11 02:49 run_atlas
[2026-03-11 04:28:39] -rw-r--r-- 1 boinc boinc       105 Mar 11 02:49 job.xml
[2026-03-11 04:28:39] -rw-r--r-- 2 boinc boinc 293916161 Mar 11 02:49 EVNT.48220085._000396.pool.root.1
[2026-03-11 04:28:39] drwxrwx--x 2 boinc boinc      4096 Mar 11 02:49 shared
[2026-03-11 04:28:39] -rw-r--r-- 2 boinc boinc    597949 Mar 11 02:49 input.tar.gz
[2026-03-11 04:28:39] -rw-r--r-- 2 boinc boinc     15845 Mar 11 02:49 start_atlas.sh
[2026-03-11 04:28:39] -rw-r--r-- 1 boinc boinc         0 Mar 11 02:49 boinc_setup_complete
[2026-03-11 04:28:39] -rw-r--r-- 1 boinc boinc      6438 Mar 11 02:49 init_data.xml
[2026-03-11 04:28:39] -rw-r--r-- 1 boinc boinc         0 Mar 11 02:49 boinc_lockfile
[2026-03-11 04:28:39] -rw-r--r-- 1 boinc boinc      2564 Mar 11 02:49 pandaJob.out
[2026-03-11 04:28:39] -rw------- 1 boinc boinc   1006644 Mar 11 02:49 agis_schedconf.cvmfs.json
[2026-03-11 04:28:39] -rw------- 1 boinc boinc   1511578 Mar 11 02:49 agis_ddmendpoints.agis.ALL.json
[2026-03-11 04:28:39] -rw------- 1 boinc boinc       420 Mar 11 02:49 workernode_map.json
[2026-03-11 04:28:39] drwx------ 5 boinc boinc      4096 Mar 11 02:49 pilot3
[2026-03-11 04:28:39] -rw------- 1 boinc boinc 229301865 Mar 11 04:27 HITS.48838416._010150.pool.root.1
[2026-03-11 04:28:39] -rw-r--r-- 1 boinc boinc       529 Mar 11 04:27 boinc_task_state.xml
[2026-03-11 04:28:39] -rw------- 1 boinc boinc      1020 Mar 11 04:27 memory_monitor_summary.json
[2026-03-11 04:28:39] -rw------- 1 boinc boinc    252505 Mar 11 04:27 log.48838416._010150.job.log.tgz.1
[2026-03-11 04:28:39] -rw------- 1 boinc boinc      6303 Mar 11 04:28 heartbeat.json
[2026-03-11 04:28:39] -rw-r--r-- 1 boinc boinc      8192 Mar 11 04:28 boinc_mmap_file
[2026-03-11 04:28:39] -rw-r--r-- 1 boinc boinc        27 Mar 11 04:28 wrapper_checkpoint.txt
[2026-03-11 04:28:39] -rw------- 1 boinc boinc        95 Mar 11 04:28 pilot_heartbeat.json
[2026-03-11 04:28:39] -rw------- 1 boinc boinc      5341 Mar 11 04:28 pilotlog.txt
[2026-03-11 04:28:39] -rw------- 1 boinc boinc    854111 Mar 11 04:28 log.48838416._010150.job.log.1
[2026-03-11 04:28:39] -rw------- 1 boinc boinc       357 Mar 11 04:28 output.list
[2026-03-11 04:28:39] -rw-r--r-- 1 boinc boinc       620 Mar 11 04:28 runtime_log
[2026-03-11 04:28:39] -rw------- 1 boinc boinc   1126400 Mar 11 04:28 result.tar.gz
[2026-03-11 04:28:39] -rw-r--r-- 1 boinc boinc      8901 Mar 11 04:28 runtime_log.err
[2026-03-11 04:28:39] -rw------- 1 boinc boinc       658 Mar 11 04:28 ZeFKDmgl6G9n9Rq4apOajLDm4fhM0noT9bVooX4SDmL89KDmvjcOom.diag
[2026-03-11 04:28:39] -rw-r--r-- 1 boinc boinc     21508 Mar 11 04:28 stderr.txt
[2026-03-11 04:28:39] HITS file was successfully produced:
[2026-03-11 04:28:39] -rw------- 1 boinc boinc 229301865 Mar 11 04:27 shared/HITS.pool.root.1
[2026-03-11 04:28:39]  *** Contents of shared directory: ***
[2026-03-11 04:28:39] total 512664
[2026-03-11 04:28:39] -rw-r--r-- 2 boinc boinc 293916161 Mar 11 02:49 ATLAS.root_0
[2026-03-11 04:28:39] -rw-r--r-- 2 boinc boinc    597949 Mar 11 02:49 input.tar.gz
[2026-03-11 04:28:39] -rw-r--r-- 2 boinc boinc     15845 Mar 11 02:49 start_atlas.sh
[2026-03-11 04:28:39] -rw------- 1 boinc boinc 229301865 Mar 11 04:27 HITS.pool.root.1
[2026-03-11 04:28:39] -rw------- 1 boinc boinc   1126400 Mar 11 04:28 result.tar.gz
04:28:40 (127531): run_atlas exited; CPU time 17059.704798
04:28:40 (127531): called boinc_finish(0)

</stderr_txt>
]]>

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