Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
19:48:10 (3408689): wrapper (7.7.26015): starting
19:48:10 (3408689): wrapper: running run_atlas (--nthreads 3)
[2026-03-10 19:48:10] Arguments: --nthreads 3
[2026-03-10 19:48:10] Threads: 3
[2026-03-10 19:48:10] Checking for CVMFS
[2026-03-10 19:48:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-10 19:48:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-10 19:48:11] Running cvmfs_config stat atlas.cern.ch
[2026-03-10 19:48:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-10 19:48:11] 2.9.2.0 964071 18938 72400 157126 2 50 27443890 36864001 0 130560 0 6787455 99.980 712498 9946 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-10 19:48:11] CVMFS is ok
[2026-03-10 19:48:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 19:48:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 19:48:11] Further information can be found at the LHC@home message board.
[2026-03-10 19:48:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 19:48:11] Checking for apptainer binary...
[2026-03-10 19:48:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-10 19:48:11] Running /usr/bin/apptainer --version
[2026-03-10 19:48:11] apptainer version 1.3.6-6.1
[2026-03-10 19:48:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 19:48:11] atlasA226
[2026-03-10 19:48:11] apptainer works
[2026-03-10 19:48:11] Set ATHENA_PROC_NUMBER=3
[2026-03-10 19:48:11] Set ATHENA_CORE_NUMBER=3
[2026-03-10 19:48:11] Starting ATLAS job with PandaID=7042039315
[2026-03-10 19:48:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 21:13:44]  *** The last 200 lines of the pilot log: ***
[2026-03-10 21:13:44]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-10 21:13:44]  is_altstaged=None
[2026-03-10 21:13:44]  is_tar=False
[2026-03-10 21:13:44]  lfn=log.48955010._022563.job.log.tgz.1
[2026-03-10 21:13:44]  mtime=0
[2026-03-10 21:13:44]  protocol_id=None
[2026-03-10 21:13:44]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-10 21:13:44]  replicas=None
[2026-03-10 21:13:44]  scope=mc23_13p6TeV
[2026-03-10 21:13:44]  status=None
[2026-03-10 21:13:44]  status_code=0
[2026-03-10 21:13:44]  storage_token=
[2026-03-10 21:13:44]  surl=/local/data/boinc/slots/0/PanDA_Pilot-7042039315/log.48955010._022563.job.log.tgz.1
[2026-03-10 21:13:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/55/2a/log.48955010._022563.job.log.tgz.1
[2026-03-10 21:13:44]  workdir=None
[2026-03-10 21:13:44] ]
[2026-03-10 21:13:44] 2026-03-10 20:13:20,533 | INFO     | time since job start (5096s) is within the limit (349056.0s)
[2026-03-10 21:13:44] 2026-03-10 20:13:20,536 | INFO     | transferring file log.48955010._022563.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-7042039315/log.48955010._022563.job.log.tgz.1 to /local/data/boinc/
[2026-03-10 21:13:44] 2026-03-10 20:13:20,536 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-7042039315/log.48955010._022563.job.log.tgz.1 /local/data/boinc/slots/0/log.48955010._0225
[2026-03-10 21:13:44] 2026-03-10 20:13:20,548 | INFO     | adding to output.list: log.48955010._022563.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/55/2a/log.48955010._022563.job.log.tg
[2026-03-10 21:13:44] 2026-03-10 20:13:20,549 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-10 21:13:44] 2026-03-10 20:13:20,549 | INFO     | summary of transferred files:
[2026-03-10 21:13:44] 2026-03-10 20:13:20,549 | INFO     |  -- lfn=log.48955010._022563.job.log.tgz.1, status_code=0, status=transferred
[2026-03-10 21:13:44] 2026-03-10 20:13:20,549 | INFO     | stage-out finished correctly
[2026-03-10 21:13:44] 2026-03-10 20:13:20,904 | INFO     | monitor loop #393: job 0:7042039315 is in state 'finished'
[2026-03-10 21:13:44] 2026-03-10 20:13:20,905 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-10 21:13:44] 2026-03-10 20:13:22,540 | INFO     | time since job start (5098s) is within the limit (349056.0s)
[2026-03-10 21:13:44] 2026-03-10 20:13:23,170 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-10 21:13:44] 2026-03-10 20:13:23,408 | INFO     | monitor loop #394: job 0:7042039315 is in state 'finished'
[2026-03-10 21:13:44] 2026-03-10 20:13:23,409 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-10 21:13:44] 2026-03-10 20:13:24,546 | INFO     | time since job start (5100s) is within the limit (349056.0s)
[2026-03-10 21:13:44] 2026-03-10 20:13:24,860 | INFO     | job 7042039315 has state=finished
[2026-03-10 21:13:44] 2026-03-10 20:13:24,861 | INFO     | preparing for final server update for job 7042039315 in state='finished'
[2026-03-10 21:13:44] 2026-03-10 20:13:24,861 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-7042039315/jobReport.json
[2026-03-10 21:13:44] 2026-03-10 20:13:24,865 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-03-10 21:13:44] 2026-03-10 20:13:24,865 | INFO     | this job has now completed (state=finished)
[2026-03-10 21:13:44] 2026-03-10 20:13:24,865 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 21:13:44] 2026-03-10 20:13:24,865 | INFO     | log transfer has been attempted: DONE
[2026-03-10 21:13:44] 2026-03-10 20:13:24,866 | INFO     | job 7042039315 has finished - writing final server update
[2026-03-10 21:13:44] 2026-03-10 20:13:24,866 | INFO     | total number of processed events: 400 (read)
[2026-03-10 21:13:44] 2026-03-10 20:13:24,867 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-7042039315/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 21:13:44] 2026-03-10 20:13:24,867 | INFO     | extracted standard info from prmon json
[2026-03-10 21:13:44] 2026-03-10 20:13:24,867 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 21:13:44] 2026-03-10 20:13:24,867 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 21:13:44] 2026-03-10 20:13:24,867 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 21:13:44] 2026-03-10 20:13:24,867 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 21:13:44] 2026-03-10 20:13:24,868 | INFO     | fitting pss+swap vs Time
[2026-03-10 21:13:44] 2026-03-10 20:13:24,868 | INFO     | sum of square deviations: 141539398.0
[2026-03-10 21:13:44] 2026-03-10 20:13:24,868 | INFO     | sum of deviations: -8037050974.0
[2026-03-10 21:13:44] 2026-03-10 20:13:24,868 | INFO     | mean x: 1773171146.0
[2026-03-10 21:13:44] 2026-03-10 20:13:24,868 | INFO     | mean y: 2409338.961038961
[2026-03-10 21:13:44] 2026-03-10 20:13:24,868 | INFO     | intersect: 100688628776.09612
[2026-03-10 21:13:44] 2026-03-10 20:13:24,868 | INFO     | chi2: 0.13548526099966784
[2026-03-10 21:13:44] 2026-03-10 20:13:24,868 | INFO     | current memory leak: -56.78 B/s (using 77 data points, chi2=0.14)
[2026-03-10 21:13:44] 2026-03-10 20:13:24,868 | INFO     | could have reported an average CPU frequency of 4300 MHz (6 samples)
[2026-03-10 21:13:44] 2026-03-10 20:13:24,868 | INFO     | ..............................
[2026-03-10 21:13:44] 2026-03-10 20:13:24,868 | INFO     | . Timing measurements:
[2026-03-10 21:13:44] 2026-03-10 20:13:24,868 | INFO     | . get job = 0 s
[2026-03-10 21:13:44] 2026-03-10 20:13:24,869 | INFO     | . initial setup = 5 s
[2026-03-10 21:13:44] 2026-03-10 20:13:24,869 | INFO     | . payload setup = 5 s
[2026-03-10 21:13:44] 2026-03-10 20:13:24,869 | INFO     | . stage-in = 0 s
[2026-03-10 21:13:44] 2026-03-10 20:13:24,869 | INFO     | . payload execution = 5077 s
[2026-03-10 21:13:44] 2026-03-10 20:13:24,869 | INFO     | . stage-out = 0 s
[2026-03-10 21:13:44] 2026-03-10 20:13:24,869 | INFO     | . log creation = 0 s
[2026-03-10 21:13:44] 2026-03-10 20:13:24,869 | INFO     | ..............................
[2026-03-10 21:13:44] 2026-03-10 20:13:24,896 | INFO     | 
[2026-03-10 21:13:44] 2026-03-10 20:13:24,896 | INFO     | job summary report
[2026-03-10 21:13:44] 2026-03-10 20:13:24,896 | INFO     | --------------------------------------------------
[2026-03-10 21:13:44] 2026-03-10 20:13:24,896 | INFO     | PanDA job id: 7042039315
[2026-03-10 21:13:44] 2026-03-10 20:13:24,896 | INFO     | task id: 48955010
[2026-03-10 21:13:44] 2026-03-10 20:13:24,896 | INFO     | errors: (none)
[2026-03-10 21:13:44] 2026-03-10 20:13:24,896 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 21:13:44] 2026-03-10 20:13:24,896 | INFO     | pilot state: finished 
[2026-03-10 21:13:44] 2026-03-10 20:13:24,896 | INFO     | transexitcode: 0
[2026-03-10 21:13:44] 2026-03-10 20:13:24,896 | INFO     | exeerrorcode: 0
[2026-03-10 21:13:44] 2026-03-10 20:13:24,896 | INFO     | exeerrordiag: 
[2026-03-10 21:13:44] 2026-03-10 20:13:24,896 | INFO     | exitcode: 0
[2026-03-10 21:13:44] 2026-03-10 20:13:24,896 | INFO     | exitmsg: OK
[2026-03-10 21:13:44] 2026-03-10 20:13:24,896 | INFO     | cpuconsumptiontime: 14521 s
[2026-03-10 21:13:44] 2026-03-10 20:13:24,896 | INFO     | nevents: 400
[2026-03-10 21:13:44] 2026-03-10 20:13:24,896 | INFO     | neventsw: 0
[2026-03-10 21:13:44] 2026-03-10 20:13:24,896 | INFO     | pid: 3417214
[2026-03-10 21:13:44] 2026-03-10 20:13:24,896 | INFO     | pgrp: 3417214
[2026-03-10 21:13:44] 2026-03-10 20:13:24,896 | INFO     | corecount: 3
[2026-03-10 21:13:44] 2026-03-10 20:13:24,896 | INFO     | event service: False
[2026-03-10 21:13:44] 2026-03-10 20:13:24,896 | INFO     | sizes: {0: 2280182, 11: 2280182, 5085: 2306612, 5086: 2315616, 5088: 2315672, 5090: 2315866}
[2026-03-10 21:13:44] 2026-03-10 20:13:24,896 | INFO     | --------------------------------------------------
[2026-03-10 21:13:44] 2026-03-10 20:13:24,896 | INFO     | 
[2026-03-10 21:13:44] 2026-03-10 20:13:24,896 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-03-10 21:13:44] 2026-03-10 20:13:24,909 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 21:13:44] 2026-03-10 20:13:24,909 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 21:13:44] 2026-03-10 20:13:24,909 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 21:13:44] 2026-03-10 20:13:24,909 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 21:13:44] 2026-03-10 20:13:24,909 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 21:13:44] 2026-03-10 20:13:24,909 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 21:13:44] 2026-03-10 20:13:24,909 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 21:13:44] 2026-03-10 20:13:24,909 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 21:13:44] 2026-03-10 20:13:24,909 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 21:13:44] 2026-03-10 20:13:24,909 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 21:13:44] 2026-03-10 20:13:24,909 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 21:13:44] 2026-03-10 20:13:24,909 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 21:13:44] 2026-03-10 20:13:24,909 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 21:13:44] 2026-03-10 20:13:24,909 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 21:13:44] 2026-03-10 20:13:24,909 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 21:13:44] 2026-03-10 20:13:24,909 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 21:13:44] 2026-03-10 20:13:24,909 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 21:13:44] 2026-03-10 20:13:24,909 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 21:13:44] 2026-03-10 20:13:24,909 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 21:13:44] 2026-03-10 20:13:24,910 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 21:13:44] 2026-03-10 20:13:24,910 | INFO     | job 7042039315 has completed (purged errors)
[2026-03-10 21:13:44] 2026-03-10 20:13:24,910 | INFO     | overall cleanup function is called
[2026-03-10 21:13:44] 2026-03-10 20:13:25,916 | INFO     | --- collectZombieJob: --- 10, [3417214]
[2026-03-10 21:13:44] 2026-03-10 20:13:25,916 | INFO     | zombie collector waiting for pid 3417214
[2026-03-10 21:13:44] 2026-03-10 20:13:25,917 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 21:13:44] 2026-03-10 20:13:25,917 | INFO     | collected zombie processes
[2026-03-10 21:13:44] 2026-03-10 20:13:25,917 | INFO     | will attempt to kill all subprocesses of pid=3417214
[2026-03-10 21:13:44] 2026-03-10 20:13:25,960 | INFO     | process IDs to be killed: [3417214] (in reverse order)
[2026-03-10 21:13:44] 2026-03-10 20:13:25,987 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 21:13:44] 2026-03-10 20:13:25,987 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 21:13:44] 2026-03-10 20:13:25,988 | INFO     | did not find any defunct processes belonging to 3417214
[2026-03-10 21:13:44] 2026-03-10 20:13:25,989 | INFO     | did not find any defunct processes belonging to 3417214
[2026-03-10 21:13:44] 2026-03-10 20:13:25,989 | INFO     | ready for new job
[2026-03-10 21:13:44] 2026-03-10 20:13:25,989 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 21:13:44] 2026-03-10 20:13:25,990 | INFO     | **************************************
[2026-03-10 21:13:44] 2026-03-10 20:13:25,990 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 21:13:44] 2026-03-10 20:13:25,990 | INFO     | **************************************
[2026-03-10 21:13:44] 2026-03-10 20:13:25,990 | INFO     | 
[2026-03-10 21:13:44] 2026-03-10 20:13:25,990 | INFO     | architecture information:
[2026-03-10 21:13:44] 2026-03-10 20:13:25,990 | INFO     | executing command: cat /etc/os-release
[2026-03-10 21:13:44] 2026-03-10 20:13:26,000 | INFO     | cat /etc/os-release:
[2026-03-10 21:13:44] NAME="CentOS Linux"
[2026-03-10 21:13:44] VERSION="7 (Core)"
[2026-03-10 21:13:44] ID="centos"
[2026-03-10 21:13:44] ID_LIKE="rhel fedora"
[2026-03-10 21:13:44] VERSION_ID="7"
[2026-03-10 21:13:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 21:13:44] ANSI_COLOR="0;31"
[2026-03-10 21:13:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 21:13:44] HOME_URL="https://www.centos.org/"
[2026-03-10 21:13:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 21:13:44] 
[2026-03-10 21:13:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 21:13:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 21:13:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 21:13:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 21:13:44] 
[2026-03-10 21:13:44] 2026-03-10 20:13:26,000 | INFO     | **************************************
[2026-03-10 21:13:44] 2026-03-10 20:13:26,504 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-10 21:13:44] 2026-03-10 20:13:26,519 | INFO     | sufficient remaining disk space (327162003456 B)
[2026-03-10 21:13:44] 2026-03-10 20:13:26,519 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 21:13:44] 2026-03-10 20:13:26,519 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 21:13:44] 2026-03-10 20:13:26,519 | INFO     | update_server=False
[2026-03-10 21:13:44] 2026-03-10 20:13:26,519 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 21:13:44] 2026-03-10 20:13:26,519 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-10 21:13:44] 2026-03-10 20:13:26,519 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 21:13:44] 2026-03-10 20:13:26,519 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 21:13:44] 2026-03-10 20:13:26,519 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 21:13:44] 2026-03-10 20:13:26,519 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 21:13:44] 2026-03-10 20:13:26,519 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 21:13:44] 2026-03-10 20:13:26,534 | INFO     | all job control threads have been joined
[2026-03-10 21:13:44] 2026-03-10 20:13:26,706 | INFO     | all data control threads have been joined
[2026-03-10 21:13:44] 2026-03-10 20:13:26,918 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 21:13:44] 2026-03-10 20:13:26,919 | INFO     | aborting loop
[2026-03-10 21:13:44] 2026-03-10 20:13:27,431 | INFO     | all payload control threads have been joined
[2026-03-10 21:13:44] 2026-03-10 20:13:27,525 | INFO     | [job] retrieve thread has finished
[2026-03-10 21:13:44] 2026-03-10 20:13:27,526 | INFO     | [job] queue monitor thread has finished
[2026-03-10 21:13:44] 2026-03-10 20:13:27,540 | INFO     | [job] control thread has finished
[2026-03-10 21:13:44] 2026-03-10 20:13:27,579 | INFO     | [job] validate thread has finished
[2026-03-10 21:13:44] 2026-03-10 20:13:27,606 | INFO     | [payload] validate_post thread has finished
[2026-03-10 21:13:44] 2026-03-10 20:13:27,661 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 21:13:44] 2026-03-10 20:13:27,667 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 21:13:44] 2026-03-10 20:13:27,712 | INFO     | [data] control thread has finished
[2026-03-10 21:13:44] 2026-03-10 20:13:27,842 | INFO     | [data] copytool_in thread has finished
[2026-03-10 21:13:44] 2026-03-10 20:13:27,925 | INFO     | [job] job monitor thread has finished
[2026-03-10 21:13:44] 2026-03-10 20:13:28,437 | INFO     | [payload] control thread has finished
[2026-03-10 21:13:44] 2026-03-10 20:13:28,522 | INFO     | [data] copytool_out thread has finished
[2026-03-10 21:13:44] 2026-03-10 20:13:28,614 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 21:13:44] 2026-03-10 20:13:28,674 | INFO     | [payload] failed_post thread has finished
[2026-03-10 21:13:44] 2026-03-10 20:13:29,210 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 21:13:44] 2026-03-10 20:13:30,960 | INFO     | [monitor] cgroup control has ended
[2026-03-10 21:13:44] 2026-03-10 20:13:33,217 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 21:13:44] 2026-03-10 20:13:37,421 | INFO     | job.realtimelogging is not enabled
[2026-03-10 21:13:44] 2026-03-10 20:13:38,427 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 21:13:44] 2026-03-10 20:13:39,064 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140513632995136)>', '<ExcThread(monitor, started 140513000810240)>']
[2026-03-10 21:13:44] 2026-03-10 20:13:39,587 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 21:13:44] 2026-03-10 20:13:39,588 | INFO     | [monitor] control thread has ended
[2026-03-10 21:13:44] 2026-03-10 20:13:44,085 | INFO     | all workflow threads have been joined
[2026-03-10 21:13:44] 2026-03-10 20:13:44,085 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 21:13:44] 2026-03-10 20:13:44,086 | INFO     | traces error code: 0
[2026-03-10 21:13:44] 2026-03-10 20:13:44,086 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 21:13:44] 2026-03-10 20:13:44,134 [wrapper] ==== pilot stdout END ====
[2026-03-10 21:13:44] 2026-03-10 20:13:44,137 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 21:13:44] 2026-03-10 20:13:44,140 [wrapper] pilotpid: 3412775
[2026-03-10 21:13:44] 2026-03-10 20:13:44,142 [wrapper] Pilot exit status: 0
[2026-03-10 21:13:44] 2026-03-10 20:13:44,150 [wrapper] pandaids: 7042039315
[2026-03-10 21:13:44] 2026-03-10 20:13:44,167 [wrapper] cleanup supervisor_pilot 3422620 3412776
[2026-03-10 21:13:44] 2026-03-10 20:13:44,170 [wrapper] Test setup, not cleaning
[2026-03-10 21:13:44] 2026-03-10 20:13:44,172 [wrapper] apfmon messages muted
[2026-03-10 21:13:44] 2026-03-10 20:13:44,175 [wrapper] ==== wrapper stdout END ====
[2026-03-10 21:13:44] 2026-03-10 20:13:44,177 [wrapper] ==== wrapper stderr END ====
[2026-03-10 21:13:44]  *** Error codes and diagnostics ***
[2026-03-10 21:13:44]     "exeErrorCode": 0,
[2026-03-10 21:13:44]     "exeErrorDiag": "",
[2026-03-10 21:13:44]     "pilotErrorCode": 0,
[2026-03-10 21:13:44]     "pilotErrorDiag": "",
[2026-03-10 21:13:44]  *** Listing of results directory ***
[2026-03-10 21:13:44] total 615204
[2026-03-10 21:13:44] -rw-r--r-- 1 boinc boinc    584627 Mar 10 05:09 pilot3.tar.gz
[2026-03-10 21:13:44] -rwx------ 1 boinc boinc     36322 Mar 10 05:15 runpilot2-wrapper.sh
[2026-03-10 21:13:44] -rw-r--r-- 1 boinc boinc      5111 Mar 10 05:16 queuedata.json
[2026-03-10 21:13:44] -rw-r--r-- 1 boinc boinc       100 Mar 10 19:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 21:13:44] -rwxr-xr-x 1 boinc boinc      7986 Mar 10 19:48 run_atlas
[2026-03-10 21:13:44] -rw-r--r-- 1 boinc boinc       105 Mar 10 19:48 job.xml
[2026-03-10 21:13:44] -rw-r--r-- 2 boinc boinc 439209490 Mar 10 19:48 EVNT.46701403._001448.pool.root.1
[2026-03-10 21:13:44] -rw-r--r-- 1 boinc boinc      6680 Mar 10 19:48 init_data.xml
[2026-03-10 21:13:44] drwxrwx--x 2 boinc boinc      4096 Mar 10 19:48 shared
[2026-03-10 21:13:44] -rw-r--r-- 2 boinc boinc    597962 Mar 10 19:48 input.tar.gz
[2026-03-10 21:13:44] -rw-r--r-- 2 boinc boinc     15845 Mar 10 19:48 start_atlas.sh
[2026-03-10 21:13:44] -rw-r--r-- 1 boinc boinc         0 Mar 10 19:48 boinc_lockfile
[2026-03-10 21:13:44] -rw-r--r-- 1 boinc boinc      2563 Mar 10 19:48 pandaJob.out
[2026-03-10 21:13:44] -rw------- 1 boinc boinc   1006644 Mar 10 19:48 agis_schedconf.cvmfs.json
[2026-03-10 21:13:44] -rw------- 1 boinc boinc   1511578 Mar 10 19:48 agis_ddmendpoints.agis.ALL.json
[2026-03-10 21:13:44] -rw------- 1 boinc boinc       429 Mar 10 19:48 workernode_map.json
[2026-03-10 21:13:44] drwx------ 5 boinc boinc      4096 Mar 10 19:48 pilot3
[2026-03-10 21:13:44] -rw------- 1 boinc boinc        95 Mar 10 21:12 pilot_heartbeat.json
[2026-03-10 21:13:44] -rw------- 1 boinc boinc 184767938 Mar 10 21:13 HITS.48955010._022563.pool.root.1
[2026-03-10 21:13:44] -rw-r--r-- 1 boinc boinc       530 Mar 10 21:13 boinc_task_state.xml
[2026-03-10 21:13:44] -rw------- 1 boinc boinc      1015 Mar 10 21:13 memory_monitor_summary.json
[2026-03-10 21:13:44] -rw------- 1 boinc boinc    284711 Mar 10 21:13 log.48955010._022563.job.log.tgz.1
[2026-03-10 21:13:44] -rw------- 1 boinc boinc      6315 Mar 10 21:13 heartbeat.json
[2026-03-10 21:13:44] -rw-r--r-- 1 boinc boinc        27 Mar 10 21:13 wrapper_checkpoint.txt
[2026-03-10 21:13:44] -rw-r--r-- 1 boinc boinc      8192 Mar 10 21:13 boinc_mmap_file
[2026-03-10 21:13:44] -rw------- 1 boinc boinc      4624 Mar 10 21:13 pilotlog.txt
[2026-03-10 21:13:44] -rw------- 1 boinc boinc    745469 Mar 10 21:13 log.48955010._022563.job.log.1
[2026-03-10 21:13:44] -rw------- 1 boinc boinc       357 Mar 10 21:13 output.list
[2026-03-10 21:13:44] -rw-r--r-- 1 boinc boinc       620 Mar 10 21:13 runtime_log
[2026-03-10 21:13:44] -rw------- 1 boinc boinc   1044480 Mar 10 21:13 result.tar.gz
[2026-03-10 21:13:44] -rw-r--r-- 1 boinc boinc      8911 Mar 10 21:13 runtime_log.err
[2026-03-10 21:13:44] -rw------- 1 boinc boinc       660 Mar 10 21:13 mcJODmwf3J9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm81eLDm9Xiz2m.diag
[2026-03-10 21:13:44] -rw-r--r-- 1 boinc boinc     21359 Mar 10 21:13 stderr.txt
[2026-03-10 21:13:44] HITS file was successfully produced:
[2026-03-10 21:13:44] -rw------- 1 boinc boinc 184767938 Mar 10 21:13 shared/HITS.pool.root.1
[2026-03-10 21:13:44]  *** Contents of shared directory: ***
[2026-03-10 21:13:44] total 610984
[2026-03-10 21:13:44] -rw-r--r-- 2 boinc boinc 439209490 Mar 10 19:48 ATLAS.root_0
[2026-03-10 21:13:44] -rw-r--r-- 2 boinc boinc    597962 Mar 10 19:48 input.tar.gz
[2026-03-10 21:13:44] -rw-r--r-- 2 boinc boinc     15845 Mar 10 19:48 start_atlas.sh
[2026-03-10 21:13:44] -rw------- 1 boinc boinc 184767938 Mar 10 21:13 HITS.pool.root.1
[2026-03-10 21:13:44] -rw------- 1 boinc boinc   1044480 Mar 10 21:13 result.tar.gz
21:13:45 (3408689): run_atlas exited; CPU time 14552.518406
21:13:45 (3408689): called boinc_finish(0)

</stderr_txt>
]]>

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