Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:58:49 (3683797): wrapper (7.7.26015): starting
23:58:49 (3683797): wrapper: running run_atlas (--nthreads 4)
[2026-03-13 23:58:49] Arguments: --nthreads 4
[2026-03-13 23:58:49] Threads: 4
[2026-03-13 23:58:49] Checking for CVMFS
[2026-03-13 23:58:49] No cvmfs_config command found, will try listing directly
[2026-03-13 23:58:49] CVMFS is ok
[2026-03-13 23:58:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 23:58:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 23:58:49] Further information can be found at the LHC@home message board.
[2026-03-13 23:58:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 23:58:49] Checking for apptainer binary...
[2026-03-13 23:58:49] which: no apptainer in ((null))
[2026-03-13 23:58:49] apptainer is not installed, using version from CVMFS
[2026-03-13 23:58:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 23:58:49] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot64/slots/11/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-03-13 23:58:49] apptainer works
[2026-03-13 23:58:49] Set ATHENA_PROC_NUMBER=4
[2026-03-13 23:58:49] Set ATHENA_CORE_NUMBER=4
[2026-03-13 23:58:49] Starting ATLAS job with PandaID=7042031902
[2026-03-13 23:58:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot64/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 01:25:21]  *** The last 200 lines of the pilot log: ***
[2026-03-14 01:25:21]  status=None
[2026-03-14 01:25:21]  status_code=0
[2026-03-14 01:25:21]  storage_token=
[2026-03-14 01:25:21]  surl=/var/lib/boinc/var/slot64/slots/11/PanDA_Pilot-7042031902/log.48955006._038623.job.log.tgz.1
[2026-03-14 01:25:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/25/d1/log.48955006._038623.job.log.tgz.1
[2026-03-14 01:25:21]  workdir=None
[2026-03-14 01:25:21] ]
[2026-03-14 01:25:21] 2026-03-14 00:24:39,400 | INFO     | transferring file log.48955006._038623.job.log.tgz.1 from /var/lib/boinc/var/slot64/slots/11/PanDA_Pilot-7042031902/log.48955006._038623.job.log.tgz.1 to /var/lib/
[2026-03-14 01:25:21] 2026-03-14 00:24:39,400 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot64/slots/11/PanDA_Pilot-7042031902/log.48955006._038623.job.log.tgz.1 /var/lib/boinc/var/slot64/slots/11/
[2026-03-14 01:25:21] 2026-03-14 00:24:39,448 | INFO     | adding to output.list: log.48955006._038623.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/25/d1/log.48955006._038623.job.log.tg
[2026-03-14 01:25:21] 2026-03-14 00:24:39,449 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-14 01:25:21] 2026-03-14 00:24:39,449 | INFO     | summary of transferred files:
[2026-03-14 01:25:21] 2026-03-14 00:24:39,449 | INFO     |  -- lfn=log.48955006._038623.job.log.tgz.1, status_code=0, status=transferred
[2026-03-14 01:25:21] 2026-03-14 00:24:39,449 | INFO     | stage-out finished correctly
[2026-03-14 01:25:21] 2026-03-14 00:24:39,672 | INFO     | time since job start (5132s) is within the limit (349056.0s)
[2026-03-14 01:25:21] 2026-03-14 00:24:40,210 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-14 01:25:21] 2026-03-14 00:24:40,306 | INFO     | job 7042031902 has state=finished
[2026-03-14 01:25:21] 2026-03-14 00:24:40,306 | INFO     | preparing for final server update for job 7042031902 in state='finished'
[2026-03-14 01:25:21] 2026-03-14 00:24:40,306 | INFO     | reading metadata from: /var/lib/boinc/var/slot64/slots/11/PanDA_Pilot-7042031902/jobReport.json
[2026-03-14 01:25:21] 2026-03-14 00:24:40,308 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot64/slots/11/workernode_map.json
[2026-03-14 01:25:21] 2026-03-14 00:24:40,308 | INFO     | this job has now completed (state=finished)
[2026-03-14 01:25:21] 2026-03-14 00:24:40,308 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 01:25:21] 2026-03-14 00:24:40,308 | INFO     | log transfer has been attempted: DONE
[2026-03-14 01:25:21] 2026-03-14 00:24:40,308 | INFO     | job 7042031902 has finished - writing final server update
[2026-03-14 01:25:21] 2026-03-14 00:24:40,308 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3497585/.job.ad'
[2026-03-14 01:25:21] 2026-03-14 00:24:40,308 | INFO     | total number of processed events: 400 (read)
[2026-03-14 01:25:21] 2026-03-14 00:24:40,343 | INFO     | using path: /var/lib/boinc/var/slot64/slots/11/PanDA_Pilot-7042031902/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 01:25:21] 2026-03-14 00:24:40,343 | INFO     | extracted standard info from prmon json
[2026-03-14 01:25:21] 2026-03-14 00:24:40,343 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 01:25:21] 2026-03-14 00:24:40,343 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 01:25:21] 2026-03-14 00:24:40,343 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 01:25:21] 2026-03-14 00:24:40,344 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 01:25:21] 2026-03-14 00:24:40,345 | INFO     | fitting pss+swap vs Time
[2026-03-14 01:25:21] 2026-03-14 00:24:40,345 | INFO     | sum of square deviations: 141539398.0
[2026-03-14 01:25:21] 2026-03-14 00:24:40,345 | INFO     | sum of deviations: 1038096414.0
[2026-03-14 01:25:21] 2026-03-14 00:24:40,345 | INFO     | mean x: 1773445396.0
[2026-03-14 01:25:21] 2026-03-14 00:24:40,345 | INFO     | mean y: 2321454.3636363638
[2026-03-14 01:25:21] 2026-03-14 00:24:40,345 | INFO     | intersect: -13004709323.119324
[2026-03-14 01:25:21] 2026-03-14 00:24:40,345 | INFO     | chi2: 0.00018109758089333066
[2026-03-14 01:25:21] 2026-03-14 00:24:40,345 | INFO     | current memory leak: 7.33 B/s (using 77 data points, chi2=0.00)
[2026-03-14 01:25:21] 2026-03-14 00:24:40,345 | INFO     | could have reported an average CPU frequency of 3566 MHz (6 samples)
[2026-03-14 01:25:21] 2026-03-14 00:24:40,346 | INFO     | ..............................
[2026-03-14 01:25:21] 2026-03-14 00:24:40,346 | INFO     | . Timing measurements:
[2026-03-14 01:25:21] 2026-03-14 00:24:40,346 | INFO     | . get job = 0 s
[2026-03-14 01:25:21] 2026-03-14 00:24:40,346 | INFO     | . initial setup = 6 s
[2026-03-14 01:25:21] 2026-03-14 00:24:40,346 | INFO     | . payload setup = 8 s
[2026-03-14 01:25:21] 2026-03-14 00:24:40,346 | INFO     | . stage-in = 0 s
[2026-03-14 01:25:21] 2026-03-14 00:24:40,346 | INFO     | . payload execution = 5108 s
[2026-03-14 01:25:21] 2026-03-14 00:24:40,346 | INFO     | . stage-out = 0 s
[2026-03-14 01:25:21] 2026-03-14 00:24:40,346 | INFO     | . log creation = 0 s
[2026-03-14 01:25:21] 2026-03-14 00:24:40,346 | INFO     | ..............................
[2026-03-14 01:25:21] 2026-03-14 00:24:40,430 | INFO     | 
[2026-03-14 01:25:21] 2026-03-14 00:24:40,430 | INFO     | job summary report
[2026-03-14 01:25:21] 2026-03-14 00:24:40,430 | INFO     | --------------------------------------------------
[2026-03-14 01:25:21] 2026-03-14 00:24:40,430 | INFO     | PanDA job id: 7042031902
[2026-03-14 01:25:21] 2026-03-14 00:24:40,430 | INFO     | task id: 48955006
[2026-03-14 01:25:21] 2026-03-14 00:24:40,430 | INFO     | errors: (none)
[2026-03-14 01:25:21] 2026-03-14 00:24:40,430 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 01:25:21] 2026-03-14 00:24:40,430 | INFO     | pilot state: finished 
[2026-03-14 01:25:21] 2026-03-14 00:24:40,430 | INFO     | transexitcode: 0
[2026-03-14 01:25:21] 2026-03-14 00:24:40,430 | INFO     | exeerrorcode: 0
[2026-03-14 01:25:21] 2026-03-14 00:24:40,430 | INFO     | exeerrordiag: 
[2026-03-14 01:25:21] 2026-03-14 00:24:40,430 | INFO     | exitcode: 0
[2026-03-14 01:25:21] 2026-03-14 00:24:40,430 | INFO     | exitmsg: OK
[2026-03-14 01:25:21] 2026-03-14 00:24:40,431 | INFO     | cpuconsumptiontime: 18128 s
[2026-03-14 01:25:21] 2026-03-14 00:24:40,431 | INFO     | nevents: 400
[2026-03-14 01:25:21] 2026-03-14 00:24:40,431 | INFO     | neventsw: 0
[2026-03-14 01:25:21] 2026-03-14 00:24:40,431 | INFO     | pid: 3698851
[2026-03-14 01:25:21] 2026-03-14 00:24:40,431 | INFO     | pgrp: 3698851
[2026-03-14 01:25:21] 2026-03-14 00:24:40,431 | INFO     | corecount: 4
[2026-03-14 01:25:21] 2026-03-14 00:24:40,431 | INFO     | event service: False
[2026-03-14 01:25:21] 2026-03-14 00:24:40,431 | INFO     | sizes: {0: 2280244, 11: 2280244, 5120: 2306851, 5121: 2315873, 5122: 2316123}
[2026-03-14 01:25:21] 2026-03-14 00:24:40,431 | INFO     | --------------------------------------------------
[2026-03-14 01:25:21] 2026-03-14 00:24:40,431 | INFO     | 
[2026-03-14 01:25:21] 2026-03-14 00:24:40,431 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot64/slots/11
[2026-03-14 01:25:21] 2026-03-14 00:24:40,499 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 01:25:21] 2026-03-14 00:24:40,500 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 01:25:21] 2026-03-14 00:24:40,500 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 01:25:21] 2026-03-14 00:24:40,500 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 01:25:21] 2026-03-14 00:24:40,500 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 01:25:21] 2026-03-14 00:24:40,500 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 01:25:21] 2026-03-14 00:24:40,500 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 01:25:21] 2026-03-14 00:24:40,500 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 01:25:21] 2026-03-14 00:24:40,500 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 01:25:21] 2026-03-14 00:24:40,500 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 01:25:21] 2026-03-14 00:24:40,500 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 01:25:21] 2026-03-14 00:24:40,500 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 01:25:21] 2026-03-14 00:24:40,500 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 01:25:21] 2026-03-14 00:24:40,500 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 01:25:21] 2026-03-14 00:24:40,500 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 01:25:21] 2026-03-14 00:24:40,500 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 01:25:21] 2026-03-14 00:24:40,500 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 01:25:21] 2026-03-14 00:24:40,500 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 01:25:21] 2026-03-14 00:24:40,500 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 01:25:21] 2026-03-14 00:24:40,500 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 01:25:21] 2026-03-14 00:24:40,500 | INFO     | job 7042031902 has completed (purged errors)
[2026-03-14 01:25:21] 2026-03-14 00:24:40,500 | INFO     | overall cleanup function is called
[2026-03-14 01:25:21] 2026-03-14 00:24:40,785 | WARNING  | process 3698851 can no longer be monitored (due to stat problems) - aborting
[2026-03-14 01:25:21] 2026-03-14 00:24:41,242 | INFO     | using path: /var/lib/boinc/var/slot64/slots/11/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 01:25:21] 2026-03-14 00:24:41,242 | INFO     | using path: /var/lib/boinc/var/slot64/slots/11/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 01:25:21] 2026-03-14 00:24:41,243 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-14 01:25:21] 2026-03-14 00:24:41,243 | WARNING  | maxPSS not found in memory monitor output
[2026-03-14 01:25:21] 2026-03-14 00:24:41,243 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot64/slots/11/PanDA_Pilot-7042031902/payload.stdout) since it has not been created yet
[2026-03-14 01:25:21] 2026-03-14 00:24:41,243 | INFO     | executing command: df -mP /var/lib/boinc/var/slot64/slots/11
[2026-03-14 01:25:21] 2026-03-14 00:24:41,261 | INFO     | sufficient remaining disk space (19915603968 B)
[2026-03-14 01:25:21] 2026-03-14 00:24:41,261 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-14 01:25:21] 2026-03-14 00:24:41,261 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot64/slots/11/PanDA_Pilot-7042031902/HITS.48955006._038623.pool.root.1 since it does not exist
[2026-03-14 01:25:21] 2026-03-14 00:24:41,521 | INFO     | --- collectZombieJob: --- 10, [3698851]
[2026-03-14 01:25:21] 2026-03-14 00:24:41,521 | INFO     | zombie collector waiting for pid 3698851
[2026-03-14 01:25:21] 2026-03-14 00:24:41,521 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 01:25:21] 2026-03-14 00:24:41,521 | INFO     | collected zombie processes
[2026-03-14 01:25:21] 2026-03-14 00:24:41,521 | INFO     | will attempt to kill all subprocesses of pid=3698851
[2026-03-14 01:25:21] 2026-03-14 00:24:42,346 | INFO     | number of running child processes to parent process 3698851: 1
[2026-03-14 01:25:21] 2026-03-14 00:24:42,346 | INFO     | maximum number of monitored processes: 6
[2026-03-14 01:25:21] 2026-03-14 00:24:42,346 | INFO     | aborting job monitoring since job object (job id=7042031902) has expired
[2026-03-14 01:25:21] 2026-03-14 00:24:42,504 | INFO     | process IDs to be killed: [3698851] (in reverse order)
[2026-03-14 01:25:21] 2026-03-14 00:24:42,831 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 01:25:21] 2026-03-14 00:24:42,831 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 01:25:21] 2026-03-14 00:24:42,861 | INFO     | did not find any defunct processes belonging to 3698851
[2026-03-14 01:25:21] 2026-03-14 00:24:42,891 | INFO     | did not find any defunct processes belonging to 3698851
[2026-03-14 01:25:21] 2026-03-14 00:24:42,891 | INFO     | ready for new job
[2026-03-14 01:25:21] 2026-03-14 00:24:42,891 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 01:25:21] 2026-03-14 00:24:42,892 | INFO     | **************************************
[2026-03-14 01:25:21] 2026-03-14 00:24:42,892 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-14 01:25:21] 2026-03-14 00:24:42,892 | INFO     | **************************************
[2026-03-14 01:25:21] 2026-03-14 00:24:42,892 | INFO     | 
[2026-03-14 01:25:21] 2026-03-14 00:24:42,898 | INFO     | architecture information:
[2026-03-14 01:25:21] 2026-03-14 00:24:42,898 | INFO     | executing command: cat /etc/os-release
[2026-03-14 01:25:21] 2026-03-14 00:24:42,981 | INFO     | cat /etc/os-release:
[2026-03-14 01:25:21] NAME="CentOS Linux"
[2026-03-14 01:25:21] VERSION="7 (Core)"
[2026-03-14 01:25:21] ID="centos"
[2026-03-14 01:25:21] ID_LIKE="rhel fedora"
[2026-03-14 01:25:21] VERSION_ID="7"
[2026-03-14 01:25:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 01:25:21] ANSI_COLOR="0;31"
[2026-03-14 01:25:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 01:25:21] HOME_URL="https://www.centos.org/"
[2026-03-14 01:25:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 01:25:21] 
[2026-03-14 01:25:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 01:25:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 01:25:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 01:25:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 01:25:21] 
[2026-03-14 01:25:21] 2026-03-14 00:24:42,981 | INFO     | **************************************
[2026-03-14 01:25:21] 2026-03-14 00:24:43,485 | INFO     | executing command: df -mP /var/lib/boinc/var/slot64/slots/11
[2026-03-14 01:25:21] 2026-03-14 00:24:43,507 | INFO     | sufficient remaining disk space (19914555392 B)
[2026-03-14 01:25:21] 2026-03-14 00:24:43,507 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 01:25:21] 2026-03-14 00:24:43,508 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 01:25:21] 2026-03-14 00:24:43,508 | INFO     | update_server=False
[2026-03-14 01:25:21] 2026-03-14 00:24:43,508 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 01:25:21] 2026-03-14 00:24:43,508 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 01:25:21] 2026-03-14 00:24:43,508 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 01:25:21] 2026-03-14 00:24:43,508 | INFO     | aborting loop
[2026-03-14 01:25:21] 2026-03-14 00:24:44,121 | INFO     | job.realtimelogging is not enabled
[2026-03-14 01:25:21] 2026-03-14 00:24:44,266 | INFO     | all data control threads have been joined
[2026-03-14 01:25:21] 2026-03-14 00:24:44,388 | INFO     | all job control threads have been joined
[2026-03-14 01:25:21] 2026-03-14 00:24:44,514 | INFO     | [job] job monitor thread has finished
[2026-03-14 01:25:21] 2026-03-14 00:24:44,515 | INFO     | [job] retrieve thread has finished
[2026-03-14 01:25:21] 2026-03-14 00:24:44,554 | INFO     | [payload] validate_post thread has finished
[2026-03-14 01:25:21] 2026-03-14 00:24:44,767 | INFO     | all payload control threads have been joined
[2026-03-14 01:25:21] 2026-03-14 00:24:45,127 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 01:25:21] 2026-03-14 00:24:45,271 | INFO     | [data] control thread has finished
[2026-03-14 01:25:21] 2026-03-14 00:24:45,394 | INFO     | [job] control thread has finished
[2026-03-14 01:25:21] 2026-03-14 00:24:45,435 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 01:25:21] 2026-03-14 00:24:45,494 | INFO     | [payload] failed_post thread has finished
[2026-03-14 01:25:21] 2026-03-14 00:24:45,515 | INFO     | [data] copytool_out thread has finished
[2026-03-14 01:25:21] 2026-03-14 00:24:45,607 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 01:25:21] 2026-03-14 00:24:45,724 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 01:25:21] 2026-03-14 00:24:45,725 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 01:25:21] 2026-03-14 00:24:45,733 | INFO     | [data] copytool_in thread has finished
[2026-03-14 01:25:21] 2026-03-14 00:24:45,733 | INFO     | [job] validate thread has finished
[2026-03-14 01:25:21] 2026-03-14 00:24:45,775 | INFO     | [payload] control thread has finished
[2026-03-14 01:25:21] 2026-03-14 00:24:46,323 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 01:25:21] 2026-03-14 00:24:46,441 | INFO     | [job] queue monitor thread has finished
[2026-03-14 01:25:21] 2026-03-14 00:24:50,335 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 01:25:21] 2026-03-14 00:25:13,797 | INFO     | PID=3688408 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-14 01:25:21] 2026-03-14 00:25:13,798 | INFO     | .. there are 51 such processes running
[2026-03-14 01:25:21] 2026-03-14 00:25:13,798 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 01:25:21] 2026-03-14 00:25:13,798 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 01:25:21] 2026-03-14 00:25:13,798 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 01:25:21] 2026-03-14 00:25:15,288 | INFO     | [monitor] cgroup control has ended
[2026-03-14 01:25:21] 2026-03-14 00:25:15,510 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22838926047040)>', '<ExcThread(monitor, started 22838616508160)>']
[2026-03-14 01:25:21] 2026-03-14 00:25:15,809 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 01:25:21] 2026-03-14 00:25:15,809 | INFO     | [monitor] control thread has ended
[2026-03-14 01:25:21] 2026-03-14 00:25:20,543 | INFO     | all workflow threads have been joined
[2026-03-14 01:25:21] 2026-03-14 00:25:20,543 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 01:25:21] 2026-03-14 00:25:20,543 | INFO     | traces error code: 0
[2026-03-14 01:25:21] 2026-03-14 00:25:20,543 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 01:25:21] 2026-03-14 00:25:20,711 [wrapper] ==== pilot stdout END ====
[2026-03-14 01:25:21] 2026-03-14 00:25:20,740 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 01:25:21] 2026-03-14 00:25:20,763 [wrapper] pilotpid: 3688408
[2026-03-14 01:25:21] 2026-03-14 00:25:20,778 [wrapper] Pilot exit status: 0
[2026-03-14 01:25:21] 2026-03-14 00:25:20,853 [wrapper] pandaids: 7042031902
[2026-03-14 01:25:21] 2026-03-14 00:25:21,090 [wrapper] cleanup supervisor_pilot  151783 3688409
[2026-03-14 01:25:21] 2026-03-14 00:25:21,106 [wrapper] Test setup, not cleaning
[2026-03-14 01:25:21] 2026-03-14 00:25:21,119 [wrapper] apfmon messages muted
[2026-03-14 01:25:21] 2026-03-14 00:25:21,129 [wrapper] ==== wrapper stdout END ====
[2026-03-14 01:25:21] 2026-03-14 00:25:21,141 [wrapper] ==== wrapper stderr END ====
[2026-03-14 01:25:21]  *** Error codes and diagnostics ***
[2026-03-14 01:25:21]     "exeErrorCode": 0,
[2026-03-14 01:25:21]     "exeErrorDiag": "",
[2026-03-14 01:25:21]     "pilotErrorCode": 0,
[2026-03-14 01:25:21]     "pilotErrorDiag": "",
[2026-03-14 01:25:21]  *** Listing of results directory ***
[2026-03-14 01:25:21] total 612096
[2026-03-14 01:25:21] -rw-r--r--. 1 boinc boinc    584627 Mar 10 05:09 pilot3.tar.gz
[2026-03-14 01:25:21] -rwx------. 1 boinc boinc     36322 Mar 10 05:11 runpilot2-wrapper.sh
[2026-03-14 01:25:21] -rw-r--r--. 1 boinc boinc      5111 Mar 10 05:11 queuedata.json
[2026-03-14 01:25:21] -rw-r--r--. 1 boinc boinc       100 Mar 13 23:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 01:25:21] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 23:58 run_atlas
[2026-03-14 01:25:21] -rw-r--r--. 1 boinc boinc       105 Mar 13 23:58 job.xml
[2026-03-14 01:25:21] -rw-r--r--. 1 boinc boinc      6706 Mar 13 23:58 init_data.xml
[2026-03-14 01:25:21] -rw-r--r--. 2 boinc boinc 438113004 Mar 13 23:58 EVNT.46701403._000770.pool.root.1
[2026-03-14 01:25:21] -rw-r--r--. 2 boinc boinc     15845 Mar 13 23:58 start_atlas.sh
[2026-03-14 01:25:21] drwxrwx--x. 2 boinc boinc      4096 Mar 13 23:58 shared
[2026-03-14 01:25:21] -rw-r--r--. 2 boinc boinc    597961 Mar 13 23:58 input.tar.gz
[2026-03-14 01:25:21] -rw-r--r--. 1 boinc boinc         0 Mar 13 23:58 boinc_lockfile
[2026-03-14 01:25:21] -rw-r--r--. 1 boinc boinc      2565 Mar 13 23:58 pandaJob.out
[2026-03-14 01:25:21] -rw-------. 1 boinc boinc   1006717 Mar 13 23:59 agis_schedconf.cvmfs.json
[2026-03-14 01:25:21] -rw-------. 1 boinc boinc   1511579 Mar 13 23:59 agis_ddmendpoints.agis.ALL.json
[2026-03-14 01:25:21] -rw-------. 1 boinc boinc       442 Mar 13 23:59 workernode_map.json
[2026-03-14 01:25:21] drwx------. 5 boinc boinc      4096 Mar 13 23:59 pilot3
[2026-03-14 01:25:21] -rw-------. 1 boinc boinc 182661761 Mar 14 01:24 HITS.48955006._038623.pool.root.1
[2026-03-14 01:25:21] -rw-------. 1 boinc boinc        95 Mar 14 01:24 pilot_heartbeat.json
[2026-03-14 01:25:21] -rw-r--r--. 1 boinc boinc       531 Mar 14 01:24 boinc_task_state.xml
[2026-03-14 01:25:21] -rw-------. 1 boinc boinc      1028 Mar 14 01:24 memory_monitor_summary.json
[2026-03-14 01:25:21] -rw-------. 1 boinc boinc    310877 Mar 14 01:24 log.48955006._038623.job.log.tgz.1
[2026-03-14 01:25:21] -rw-------. 1 boinc boinc      6349 Mar 14 01:24 heartbeat.json
[2026-03-14 01:25:21] -rw-r--r--. 1 boinc boinc      8192 Mar 14 01:24 boinc_mmap_file
[2026-03-14 01:25:21] -rw-r--r--. 1 boinc boinc        27 Mar 14 01:24 wrapper_checkpoint.txt
[2026-03-14 01:25:21] -rw-------. 1 boinc boinc      4902 Mar 14 01:25 pilotlog.txt
[2026-03-14 01:25:21] -rw-------. 1 boinc boinc    724387 Mar 14 01:25 log.48955006._038623.job.log.1
[2026-03-14 01:25:21] -rw-------. 1 boinc boinc       357 Mar 14 01:25 output.list
[2026-03-14 01:25:21] -rw-r--r--. 1 boinc boinc       620 Mar 14 01:25 runtime_log
[2026-03-14 01:25:21] -rw-------. 1 boinc boinc   1054720 Mar 14 01:25 result.tar.gz
[2026-03-14 01:25:21] -rw-------. 1 boinc boinc       662 Mar 14 01:25 vo8NDm6b3J9n9Rq4apOajLDm4fhM0noT9bVooX4SDmtEcLDm7RjUHn.diag
[2026-03-14 01:25:21] -rw-r--r--. 1 boinc boinc      9221 Mar 14 01:25 runtime_log.err
[2026-03-14 01:25:21] -rw-r--r--. 1 boinc boinc     22092 Mar 14 01:25 stderr.txt
[2026-03-14 01:25:21] HITS file was successfully produced:
[2026-03-14 01:25:21] -rw-------. 1 boinc boinc 182661761 Mar 14 01:24 shared/HITS.pool.root.1
[2026-03-14 01:25:21]  *** Contents of shared directory: ***
[2026-03-14 01:25:21] total 607872
[2026-03-14 01:25:21] -rw-r--r--. 2 boinc boinc 438113004 Mar 13 23:58 ATLAS.root_0
[2026-03-14 01:25:21] -rw-r--r--. 2 boinc boinc     15845 Mar 13 23:58 start_atlas.sh
[2026-03-14 01:25:21] -rw-r--r--. 2 boinc boinc    597961 Mar 13 23:58 input.tar.gz
[2026-03-14 01:25:21] -rw-------. 1 boinc boinc 182661761 Mar 14 01:24 HITS.pool.root.1
[2026-03-14 01:25:21] -rw-------. 1 boinc boinc   1054720 Mar 14 01:25 result.tar.gz
01:25:22 (3683797): run_atlas exited; CPU time 18355.484496
01:25:22 (3683797): called boinc_finish(0)

</stderr_txt>
]]>

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