Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:20:29 (1786671): wrapper (7.7.26015): starting
10:20:29 (1786671): wrapper: running run_atlas (--nthreads 4)
[2026-03-15 10:20:29] Arguments: --nthreads 4
[2026-03-15 10:20:29] Threads: 4
[2026-03-15 10:20:29] Checking for CVMFS
[2026-03-15 10:20:29] No cvmfs_config command found, will try listing directly
[2026-03-15 10:20:29] CVMFS is ok
[2026-03-15 10:20:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 10:20:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 10:20:29] Further information can be found at the LHC@home message board.
[2026-03-15 10:20:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 10:20:29] Checking for apptainer binary...
[2026-03-15 10:20:29] which: no apptainer in ((null))
[2026-03-15 10:20:29] apptainer is not installed, using version from CVMFS
[2026-03-15 10:20:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 10:20:29] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot64/slots/16/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-03-15 10:20:29] apptainer works
[2026-03-15 10:20:29] Set ATHENA_PROC_NUMBER=4
[2026-03-15 10:20:29] Set ATHENA_CORE_NUMBER=4
[2026-03-15 10:20:29] Starting ATLAS job with PandaID=7047969714
[2026-03-15 10:20:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot64/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 12:23:01]  *** The last 200 lines of the pilot log: ***
[2026-03-15 12:23:01] 2026-03-15 11:22:20,623 | INFO     | extracted standard info from prmon json
[2026-03-15 12:23:01] 2026-03-15 11:22:20,623 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 12:23:01] 2026-03-15 11:22:20,623 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 12:23:01] 2026-03-15 11:22:20,623 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 12:23:01] 2026-03-15 11:22:20,623 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 12:23:01] 2026-03-15 11:22:20,625 | INFO     | fitting pss+swap vs Time
[2026-03-15 12:23:01] 2026-03-15 11:22:20,625 | INFO     | sum of square deviations: 535786790.0
[2026-03-15 12:23:01] 2026-03-15 11:22:20,625 | INFO     | sum of deviations: 3201599426.499998
[2026-03-15 12:23:01] 2026-03-15 11:22:20,625 | INFO     | mean x: 1773570092.5
[2026-03-15 12:23:01] 2026-03-15 11:22:20,625 | INFO     | mean y: 2319305.2916666665
[2026-03-15 12:23:01] 2026-03-15 11:22:20,625 | INFO     | intersect: -10595666865.672998
[2026-03-15 12:23:01] 2026-03-15 11:22:20,626 | INFO     | chi2: 1.9140275725907583
[2026-03-15 12:23:01] 2026-03-15 11:22:20,626 | INFO     | sum of square deviations: 471562330.0
[2026-03-15 12:23:01] 2026-03-15 11:22:20,626 | INFO     | sum of deviations: 10504266855.999998
[2026-03-15 12:23:01] 2026-03-15 11:22:20,626 | INFO     | mean x: 1773569940.0
[2026-03-15 12:23:01] 2026-03-15 11:22:20,626 | INFO     | mean y: 2336038.252173913
[2026-03-15 12:23:01] 2026-03-15 11:22:20,626 | INFO     | intersect: -39504746593.941765
[2026-03-15 12:23:01] 2026-03-15 11:22:20,626 | INFO     | chi2: 1.1064083366668904
[2026-03-15 12:23:01] 2026-03-15 11:22:20,626 | INFO     | current chi2=1.1064083366668904 (change=42.19475453170738 %)
[2026-03-15 12:23:01] 2026-03-15 11:22:20,626 | INFO     | sum of square deviations: 412686807.5
[2026-03-15 12:23:01] 2026-03-15 11:22:20,627 | INFO     | sum of deviations: 10081087896.0
[2026-03-15 12:23:01] 2026-03-15 11:22:20,627 | INFO     | mean x: 1773569787.5
[2026-03-15 12:23:01] 2026-03-15 11:22:20,627 | INFO     | mean y: 2334941.581818182
[2026-03-15 12:23:01] 2026-03-15 11:22:20,627 | INFO     | intersect: -43322318506.36622
[2026-03-15 12:23:01] 2026-03-15 11:22:20,627 | INFO     | chi2: 1.1079271313814987
[2026-03-15 12:23:01] 2026-03-15 11:22:20,627 | INFO     | current chi2=1.1079271313814987 (change=-0.13727252988563837 %)
[2026-03-15 12:23:01] 2026-03-15 11:22:20,627 | INFO     | right removable region: 109
[2026-03-15 12:23:01] 2026-03-15 11:22:20,627 | INFO     | sum of square deviations: 471562330.0
[2026-03-15 12:23:01] 2026-03-15 11:22:20,627 | INFO     | sum of deviations: -8040948935.0
[2026-03-15 12:23:01] 2026-03-15 11:22:20,627 | INFO     | mean x: 1773570245.0
[2026-03-15 12:23:01] 2026-03-15 11:22:20,627 | INFO     | mean y: 2345259.843478261
[2026-03-15 12:23:01] 2026-03-15 11:22:20,627 | INFO     | intersect: 30244768934.101852
[2026-03-15 12:23:01] 2026-03-15 11:22:20,627 | INFO     | chi2: 0.8366080729836279
[2026-03-15 12:23:01] 2026-03-15 11:22:20,627 | INFO     | current chi2=0.8366080729836279 (change=56.290698997025125 %)
[2026-03-15 12:23:01] 2026-03-15 11:22:20,628 | INFO     | sum of square deviations: 412686807.5
[2026-03-15 12:23:01] 2026-03-15 11:22:20,628 | INFO     | sum of deviations: -7912580352.0
[2026-03-15 12:23:01] 2026-03-15 11:22:20,628 | INFO     | mean x: 1773570397.5
[2026-03-15 12:23:01] 2026-03-15 11:22:20,628 | INFO     | mean y: 2344923.2
[2026-03-15 12:23:01] 2026-03-15 11:22:20,628 | INFO     | intersect: 34007595454.857304
[2026-03-15 12:23:01] 2026-03-15 11:22:20,628 | INFO     | chi2: 0.8372301667721602
[2026-03-15 12:23:01] 2026-03-15 11:22:20,628 | INFO     | current chi2=0.8372301667721602 (change=-0.07435904680117274 %)
[2026-03-15 12:23:01] 2026-03-15 11:22:20,628 | INFO     | left removable region: 20
[2026-03-15 12:23:01] 2026-03-15 11:22:20,628 | INFO     | sum of square deviations: 218571540.0
[2026-03-15 12:23:01] 2026-03-15 11:22:20,628 | INFO     | sum of deviations: -612772694.0000001
[2026-03-15 12:23:01] 2026-03-15 11:22:20,628 | INFO     | mean x: 1773570367.0
[2026-03-15 12:23:01] 2026-03-15 11:22:20,628 | INFO     | mean y: 2364433.146067416
[2026-03-15 12:23:01] 2026-03-15 11:22:20,628 | INFO     | intersect: 4974628854.145978
[2026-03-15 12:23:01] 2026-03-15 11:22:20,628 | INFO     | chi2: 0.0001278878488006406
[2026-03-15 12:23:01] 2026-03-15 11:22:20,629 | INFO     | current memory leak: -2.80 B/s (using 89 data points, chi2=0.00)
[2026-03-15 12:23:01] 2026-03-15 11:22:20,629 | INFO     | could have reported an average CPU frequency of 3538 MHz (8 samples)
[2026-03-15 12:23:01] 2026-03-15 11:22:20,629 | INFO     | ..............................
[2026-03-15 12:23:01] 2026-03-15 11:22:20,629 | INFO     | . Timing measurements:
[2026-03-15 12:23:01] 2026-03-15 11:22:20,629 | INFO     | . get job = 0 s
[2026-03-15 12:23:01] 2026-03-15 11:22:20,629 | INFO     | . initial setup = 4 s
[2026-03-15 12:23:01] 2026-03-15 11:22:20,629 | INFO     | . payload setup = 5 s
[2026-03-15 12:23:01] 2026-03-15 11:22:20,629 | INFO     | . stage-in = 0 s
[2026-03-15 12:23:01] 2026-03-15 11:22:20,629 | INFO     | . payload execution = 7275 s
[2026-03-15 12:23:01] 2026-03-15 11:22:20,629 | INFO     | . stage-out = 0 s
[2026-03-15 12:23:01] 2026-03-15 11:22:20,629 | INFO     | . log creation = 0 s
[2026-03-15 12:23:01] 2026-03-15 11:22:20,629 | INFO     | ..............................
[2026-03-15 12:23:01] 2026-03-15 11:22:20,676 | INFO     | 
[2026-03-15 12:23:01] 2026-03-15 11:22:20,676 | INFO     | job summary report
[2026-03-15 12:23:01] 2026-03-15 11:22:20,676 | INFO     | --------------------------------------------------
[2026-03-15 12:23:01] 2026-03-15 11:22:20,676 | INFO     | PanDA job id: 7047969714
[2026-03-15 12:23:01] 2026-03-15 11:22:20,676 | INFO     | task id: 48998012
[2026-03-15 12:23:01] 2026-03-15 11:22:20,676 | INFO     | errors: (none)
[2026-03-15 12:23:01] 2026-03-15 11:22:20,676 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 12:23:01] 2026-03-15 11:22:20,676 | INFO     | pilot state: finished 
[2026-03-15 12:23:01] 2026-03-15 11:22:20,676 | INFO     | transexitcode: 0
[2026-03-15 12:23:01] 2026-03-15 11:22:20,676 | INFO     | exeerrorcode: 0
[2026-03-15 12:23:01] 2026-03-15 11:22:20,676 | INFO     | exeerrordiag: 
[2026-03-15 12:23:01] 2026-03-15 11:22:20,677 | INFO     | exitcode: 0
[2026-03-15 12:23:01] 2026-03-15 11:22:20,677 | INFO     | exitmsg: OK
[2026-03-15 12:23:01] 2026-03-15 11:22:20,677 | INFO     | cpuconsumptiontime: 28056 s
[2026-03-15 12:23:01] 2026-03-15 11:22:20,677 | INFO     | nevents: 400
[2026-03-15 12:23:01] 2026-03-15 11:22:20,677 | INFO     | neventsw: 0
[2026-03-15 12:23:01] 2026-03-15 11:22:20,677 | INFO     | pid: 1797813
[2026-03-15 12:23:01] 2026-03-15 11:22:20,677 | INFO     | pgrp: 1797813
[2026-03-15 12:23:01] 2026-03-15 11:22:20,677 | INFO     | corecount: 4
[2026-03-15 12:23:01] 2026-03-15 11:22:20,677 | INFO     | event service: False
[2026-03-15 12:23:01] 2026-03-15 11:22:20,677 | INFO     | sizes: {0: 2280219, 11: 2280219, 7283: 2307628, 7284: 2307627, 7285: 2316705, 7287: 2317083}
[2026-03-15 12:23:01] 2026-03-15 11:22:20,677 | INFO     | --------------------------------------------------
[2026-03-15 12:23:01] 2026-03-15 11:22:20,677 | INFO     | 
[2026-03-15 12:23:01] 2026-03-15 11:22:20,677 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot64/slots/16
[2026-03-15 12:23:01] 2026-03-15 11:22:20,698 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 12:23:01] 2026-03-15 11:22:20,698 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 12:23:01] 2026-03-15 11:22:20,698 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 12:23:01] 2026-03-15 11:22:20,698 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 12:23:01] 2026-03-15 11:22:20,698 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 12:23:01] 2026-03-15 11:22:20,698 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 12:23:01] 2026-03-15 11:22:20,698 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 12:23:01] 2026-03-15 11:22:20,698 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 12:23:01] 2026-03-15 11:22:20,699 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 12:23:01] 2026-03-15 11:22:20,699 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 12:23:01] 2026-03-15 11:22:20,699 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 12:23:01] 2026-03-15 11:22:20,699 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 12:23:01] 2026-03-15 11:22:20,699 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 12:23:01] 2026-03-15 11:22:20,699 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 12:23:01] 2026-03-15 11:22:20,699 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 12:23:01] 2026-03-15 11:22:20,699 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 12:23:01] 2026-03-15 11:22:20,699 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 12:23:01] 2026-03-15 11:22:20,699 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 12:23:01] 2026-03-15 11:22:20,699 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 12:23:01] 2026-03-15 11:22:20,699 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 12:23:01] 2026-03-15 11:22:20,699 | INFO     | job 7047969714 has completed (purged errors)
[2026-03-15 12:23:01] 2026-03-15 11:22:20,699 | INFO     | overall cleanup function is called
[2026-03-15 12:23:01] 2026-03-15 11:22:21,707 | INFO     | --- collectZombieJob: --- 10, [1797813]
[2026-03-15 12:23:01] 2026-03-15 11:22:21,707 | INFO     | zombie collector waiting for pid 1797813
[2026-03-15 12:23:01] 2026-03-15 11:22:21,707 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 12:23:01] 2026-03-15 11:22:21,707 | INFO     | collected zombie processes
[2026-03-15 12:23:01] 2026-03-15 11:22:21,707 | INFO     | will attempt to kill all subprocesses of pid=1797813
[2026-03-15 12:23:01] 2026-03-15 11:22:23,033 | WARNING  | process 1797813 can no longer be monitored (due to stat problems) - aborting
[2026-03-15 12:23:01] 2026-03-15 11:22:23,265 | INFO     | process IDs to be killed: [1797813] (in reverse order)
[2026-03-15 12:23:01] 2026-03-15 11:22:23,483 | INFO     | using path: /var/lib/boinc/var/slot64/slots/16/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 12:23:01] 2026-03-15 11:22:23,494 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 12:23:01] 2026-03-15 11:22:23,494 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 12:23:01] 2026-03-15 11:22:23,558 | INFO     | did not find any defunct processes belonging to 1797813
[2026-03-15 12:23:01] 2026-03-15 11:22:23,619 | INFO     | did not find any defunct processes belonging to 1797813
[2026-03-15 12:23:01] 2026-03-15 11:22:23,619 | INFO     | ready for new job
[2026-03-15 12:23:01] 2026-03-15 11:22:23,619 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 12:23:01] 2026-03-15 11:22:23,620 | INFO     | **************************************
[2026-03-15 12:23:01] 2026-03-15 11:22:23,620 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-15 12:23:01] 2026-03-15 11:22:23,621 | INFO     | **************************************
[2026-03-15 12:23:01] 2026-03-15 11:22:23,621 | INFO     | 
[2026-03-15 12:23:01] 2026-03-15 11:22:23,628 | INFO     | architecture information:
[2026-03-15 12:23:01] 2026-03-15 11:22:23,628 | INFO     | executing command: cat /etc/os-release
[2026-03-15 12:23:01] 2026-03-15 11:22:23,644 | INFO     | cat /etc/os-release:
[2026-03-15 12:23:01] NAME="CentOS Linux"
[2026-03-15 12:23:01] VERSION="7 (Core)"
[2026-03-15 12:23:01] ID="centos"
[2026-03-15 12:23:01] ID_LIKE="rhel fedora"
[2026-03-15 12:23:01] VERSION_ID="7"
[2026-03-15 12:23:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 12:23:01] ANSI_COLOR="0;31"
[2026-03-15 12:23:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 12:23:01] HOME_URL="https://www.centos.org/"
[2026-03-15 12:23:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 12:23:01] 
[2026-03-15 12:23:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 12:23:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 12:23:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 12:23:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 12:23:01] 
[2026-03-15 12:23:01] 2026-03-15 11:22:23,644 | INFO     | **************************************
[2026-03-15 12:23:01] 2026-03-15 11:22:24,047 | INFO     | number of running child processes to parent process 1797813: 1
[2026-03-15 12:23:01] 2026-03-15 11:22:24,047 | INFO     | maximum number of monitored processes: 6
[2026-03-15 12:23:01] 2026-03-15 11:22:24,047 | INFO     | aborting job monitoring since job object (job id=7047969714) has expired
[2026-03-15 12:23:01] 2026-03-15 11:22:24,147 | INFO     | executing command: df -mP /var/lib/boinc/var/slot64/slots/16
[2026-03-15 12:23:01] 2026-03-15 11:22:24,162 | INFO     | sufficient remaining disk space (113301782528 B)
[2026-03-15 12:23:01] 2026-03-15 11:22:24,163 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 12:23:01] 2026-03-15 11:22:24,163 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 12:23:01] 2026-03-15 11:22:24,163 | INFO     | update_server=False
[2026-03-15 12:23:01] 2026-03-15 11:22:24,163 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 12:23:01] 2026-03-15 11:22:24,163 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 12:23:01] 2026-03-15 11:22:24,163 | INFO     | will abort loop
[2026-03-15 12:23:01] 2026-03-15 11:22:24,163 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 12:23:01] 2026-03-15 11:22:24,285 | INFO     | all payload control threads have been joined
[2026-03-15 12:23:01] 2026-03-15 11:22:24,831 | INFO     | all data control threads have been joined
[2026-03-15 12:23:01] 2026-03-15 11:22:25,168 | INFO     | [job] retrieve thread has finished
[2026-03-15 12:23:01] 2026-03-15 11:22:25,169 | INFO     | [job] job monitor thread has finished
[2026-03-15 12:23:01] 2026-03-15 11:22:25,261 | INFO     | all job control threads have been joined
[2026-03-15 12:23:01] 2026-03-15 11:22:25,289 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 12:23:01] 2026-03-15 11:22:25,291 | INFO     | [payload] control thread has finished
[2026-03-15 12:23:01] 2026-03-15 11:22:25,685 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 12:23:01] 2026-03-15 11:22:25,836 | INFO     | [data] control thread has finished
[2026-03-15 12:23:01] 2026-03-15 11:22:25,846 | INFO     | [payload] validate_post thread has finished
[2026-03-15 12:23:01] 2026-03-15 11:22:26,005 | INFO     | [payload] failed_post thread has finished
[2026-03-15 12:23:01] 2026-03-15 11:22:26,168 | INFO     | [data] copytool_out thread has finished
[2026-03-15 12:23:01] 2026-03-15 11:22:26,182 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 12:23:01] 2026-03-15 11:22:26,182 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 12:23:01] 2026-03-15 11:22:26,194 | INFO     | [data] copytool_in thread has finished
[2026-03-15 12:23:01] 2026-03-15 11:22:26,216 | INFO     | [job] validate thread has finished
[2026-03-15 12:23:01] 2026-03-15 11:22:26,266 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 12:23:01] 2026-03-15 11:22:26,267 | INFO     | [job] control thread has finished
[2026-03-15 12:23:01] 2026-03-15 11:22:26,609 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 12:23:01] 2026-03-15 11:22:26,690 | INFO     | [job] queue monitor thread has finished
[2026-03-15 12:23:01] 2026-03-15 11:22:30,615 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 12:23:01] 2026-03-15 11:22:53,629 | INFO     | [monitor] cgroup control has ended
[2026-03-15 12:23:01] 2026-03-15 11:22:53,929 | INFO     | PID=1791230 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-15 12:23:01] 2026-03-15 11:22:53,929 | INFO     | .. there are 48 such processes running
[2026-03-15 12:23:01] 2026-03-15 11:22:53,933 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 12:23:01] 2026-03-15 11:22:53,933 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 12:23:01] 2026-03-15 11:22:53,933 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 12:23:01] 2026-03-15 11:22:55,671 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23403115751232)>', '<ExcThread(monitor, started 23402790221568)>']
[2026-03-15 12:23:01] 2026-03-15 11:22:55,942 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 12:23:01] 2026-03-15 11:22:55,946 | INFO     | [monitor] control thread has ended
[2026-03-15 12:23:01] 2026-03-15 11:23:00,696 | INFO     | all workflow threads have been joined
[2026-03-15 12:23:01] 2026-03-15 11:23:00,697 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 12:23:01] 2026-03-15 11:23:00,697 | INFO     | traces error code: 0
[2026-03-15 12:23:01] 2026-03-15 11:23:00,697 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 12:23:01] 2026-03-15 11:23:00,820 [wrapper] ==== pilot stdout END ====
[2026-03-15 12:23:01] 2026-03-15 11:23:00,822 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 12:23:01] 2026-03-15 11:23:00,823 [wrapper] pilotpid: 1791230
[2026-03-15 12:23:01] 2026-03-15 11:23:00,824 [wrapper] Pilot exit status: 0
[2026-03-15 12:23:01] 2026-03-15 11:23:00,831 [wrapper] pandaids: 7047969714
[2026-03-15 12:23:01] 2026-03-15 11:23:00,968 [wrapper] cleanup supervisor_pilot 3012778 1791231
[2026-03-15 12:23:01] 2026-03-15 11:23:00,970 [wrapper] Test setup, not cleaning
[2026-03-15 12:23:01] 2026-03-15 11:23:00,971 [wrapper] apfmon messages muted
[2026-03-15 12:23:01] 2026-03-15 11:23:00,972 [wrapper] ==== wrapper stdout END ====
[2026-03-15 12:23:01] 2026-03-15 11:23:00,974 [wrapper] ==== wrapper stderr END ====
[2026-03-15 12:23:01]  *** Error codes and diagnostics ***
[2026-03-15 12:23:01]     "exeErrorCode": 0,
[2026-03-15 12:23:01]     "exeErrorDiag": "",
[2026-03-15 12:23:01]     "pilotErrorCode": 0,
[2026-03-15 12:23:01]     "pilotErrorDiag": "",
[2026-03-15 12:23:01]  *** Listing of results directory ***
[2026-03-15 12:23:01] total 599220
[2026-03-15 12:23:01] -rw-r--r--. 1 boinc boinc    584627 Mar 10 01:18 pilot3.tar.gz
[2026-03-15 12:23:01] -rw-r--r--. 1 boinc boinc      5111 Mar 10 01:51 queuedata.json
[2026-03-15 12:23:01] -rwx------. 1 boinc boinc     36322 Mar 10 01:51 runpilot2-wrapper.sh
[2026-03-15 12:23:01] -rw-r--r--. 1 boinc boinc       100 Mar 15 10:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 12:23:01] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 10:20 run_atlas
[2026-03-15 12:23:01] -rw-r--r--. 1 boinc boinc       105 Mar 15 10:20 job.xml
[2026-03-15 12:23:01] -rw-r--r--. 2 boinc boinc 341135033 Mar 15 10:20 EVNT.48998009._000004.pool.root.1
[2026-03-15 12:23:01] -rw-r--r--. 1 boinc boinc      6708 Mar 15 10:20 init_data.xml
[2026-03-15 12:23:01] -rw-r--r--. 2 boinc boinc     15845 Mar 15 10:20 start_atlas.sh
[2026-03-15 12:23:01] drwxrwx--x. 2 boinc boinc      4096 Mar 15 10:20 shared
[2026-03-15 12:23:01] -rw-r--r--. 2 boinc boinc    597976 Mar 15 10:20 input.tar.gz
[2026-03-15 12:23:01] -rw-r--r--. 1 boinc boinc         0 Mar 15 10:20 boinc_lockfile
[2026-03-15 12:23:01] -rw-r--r--. 1 boinc boinc      2582 Mar 15 10:20 pandaJob.out
[2026-03-15 12:23:01] -rw-------. 1 boinc boinc   1006481 Mar 15 10:20 agis_schedconf.cvmfs.json
[2026-03-15 12:23:01] -rw-------. 1 boinc boinc   1511579 Mar 15 10:20 agis_ddmendpoints.agis.ALL.json
[2026-03-15 12:23:01] -rw-------. 1 boinc boinc       443 Mar 15 10:20 workernode_map.json
[2026-03-15 12:23:01] drwx------. 5 boinc boinc      4096 Mar 15 10:20 pilot3
[2026-03-15 12:23:01] -rw-------. 1 boinc boinc 265800109 Mar 15 12:21 HITS.48998012._002587.pool.root.1
[2026-03-15 12:23:01] -rw-r--r--. 1 boinc boinc       529 Mar 15 12:21 boinc_task_state.xml
[2026-03-15 12:23:01] -rw-------. 1 boinc boinc      1025 Mar 15 12:22 memory_monitor_summary.json
[2026-03-15 12:23:01] -rw-------. 1 boinc boinc    319021 Mar 15 12:22 log.48998012._002587.job.log.tgz.1
[2026-03-15 12:23:01] -rw-------. 1 boinc boinc      6344 Mar 15 12:22 heartbeat.json
[2026-03-15 12:23:01] -rw-r--r--. 1 boinc boinc      8192 Mar 15 12:22 boinc_mmap_file
[2026-03-15 12:23:01] -rw-r--r--. 1 boinc boinc        27 Mar 15 12:22 wrapper_checkpoint.txt
[2026-03-15 12:23:01] -rw-------. 1 boinc boinc        95 Mar 15 12:22 pilot_heartbeat.json
[2026-03-15 12:23:01] -rw-------. 1 boinc boinc      5122 Mar 15 12:23 pilotlog.txt
[2026-03-15 12:23:01] -rw-------. 1 boinc boinc   1046780 Mar 15 12:23 log.48998012._002587.job.log.1
[2026-03-15 12:23:01] -rw-------. 1 boinc boinc       357 Mar 15 12:23 output.list
[2026-03-15 12:23:01] -rw-r--r--. 1 boinc boinc       620 Mar 15 12:23 runtime_log
[2026-03-15 12:23:01] -rw-------. 1 boinc boinc   1382400 Mar 15 12:23 result.tar.gz
[2026-03-15 12:23:01] -rw-r--r--. 1 boinc boinc      9221 Mar 15 12:23 runtime_log.err
[2026-03-15 12:23:01] -rw-------. 1 boinc boinc       663 Mar 15 12:23 HtJODmEV0J9n9Rq4apOajLDm4fhM0noT9bVooX4SDmCdbLDmmrbLyn.diag
[2026-03-15 12:23:01] -rw-r--r--. 1 boinc boinc     20844 Mar 15 12:23 stderr.txt
[2026-03-15 12:23:01] HITS file was successfully produced:
[2026-03-15 12:23:01] -rw-------. 1 boinc boinc 265800109 Mar 15 12:21 shared/HITS.pool.root.1
[2026-03-15 12:23:01]  *** Contents of shared directory: ***
[2026-03-15 12:23:01] total 594672
[2026-03-15 12:23:01] -rw-r--r--. 2 boinc boinc 341135033 Mar 15 10:20 ATLAS.root_0
[2026-03-15 12:23:01] -rw-r--r--. 2 boinc boinc     15845 Mar 15 10:20 start_atlas.sh
[2026-03-15 12:23:01] -rw-r--r--. 2 boinc boinc    597976 Mar 15 10:20 input.tar.gz
[2026-03-15 12:23:01] -rw-------. 1 boinc boinc 265800109 Mar 15 12:21 HITS.pool.root.1
[2026-03-15 12:23:01] -rw-------. 1 boinc boinc   1382400 Mar 15 12:23 result.tar.gz
12:23:02 (1786671): run_atlas exited; CPU time 28405.435207
12:23:02 (1786671): called boinc_finish(0)

</stderr_txt>
]]>

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