Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-10 00:02:05 (5060): vboxwrapper version 26210
2026-03-10 00:02:05 (5060): BOINC client version: 8.2.8
2026-03-10 00:02:07 (5060): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2026-03-10 00:02:07 (5060): Successfully copied 'init_data.xml' to the shared directory.
2026-03-10 00:02:07 (5060): Create VM. (boinc_213a47ce6bc39520, slot#0)
2026-03-10 00:02:08 (5060): Setting Memory Size for VM. (4200MB)
2026-03-10 00:02:09 (5060): Setting CPU Count for VM. (2)
2026-03-10 00:02:09 (5060): Setting Chipset Options for VM.
2026-03-10 00:02:09 (5060): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-10 00:02:10 (5060): Setting Boot Options for VM.
2026-03-10 00:02:10 (5060): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-10 00:02:10 (5060): Enabling VM Network Access.
2026-03-10 00:02:11 (5060): Disabling USB Support for VM.
2026-03-10 00:02:11 (5060): Disabling COM Port Support for VM.
2026-03-10 00:02:11 (5060): Disabling LPT Port Support for VM.
2026-03-10 00:02:12 (5060): Disabling Audio Support for VM.
2026-03-10 00:02:12 (5060): Disabling Clipboard Support for VM.
2026-03-10 00:02:12 (5060): Disabling Drag and Drop Support for VM.
2026-03-10 00:02:12 (5060): Adding storage controller(s) to VM.
2026-03-10 00:02:13 (5060): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-10 00:02:15 (5060): Adding VirtualBox Guest Additions to VM.
2026-03-10 00:02:15 (5060): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-10 00:02:16 (5060): forwarding host port 58344 to guest port 80
2026-03-10 00:02:16 (5060): Enabling remote desktop for VM.
2026-03-10 00:02:17 (5060): Enabling shared directory for VM.
2026-03-10 00:02:17 (5060): Starting VM using VBoxManage interface. (boinc_213a47ce6bc39520, slot#0)
2026-03-10 00:02:26 (5060): Successfully started VM. (PID = '12472')
2026-03-10 00:02:26 (5060): Reporting VM Process ID to BOINC.
2026-03-10 00:02:26 (5060): Guest Log: BIOS: VirtualBox 7.0.6
2026-03-10 00:02:26 (5060): Guest Log: CPUID EDX: 0x178bfbff
2026-03-10 00:02:26 (5060): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-10 00:02:26 (5060): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-10 00:02:26 (5060): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-10 00:02:26 (5060): Detected: Web Application Enabled (http://localhost:58344)
2026-03-10 00:02:26 (5060): Detected: Remote Desktop Enabled (localhost:58345)
2026-03-10 00:02:26 (5060): Preference change detected
2026-03-10 00:02:26 (5060): Setting CPU throttle for VM. (100%)
2026-03-10 00:02:26 (5060): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 420 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-10 00:02:28 (5060): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-10 00:02:28 (5060): Guest Log: BIOS: Booting from Hard Disk...
2026-03-10 00:02:31 (5060): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-10 00:02:31 (5060): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-10 00:02:31 (5060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-10 00:02:31 (5060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-10 00:02:31 (5060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-10 00:02:31 (5060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-10 00:02:31 (5060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-10 00:02:31 (5060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-10 00:02:31 (5060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-10 00:02:31 (5060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-10 00:02:31 (5060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-10 00:02:31 (5060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-10 00:02:31 (5060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-10 00:02:31 (5060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-10 00:02:31 (5060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-10 00:02:31 (5060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-10 00:02:31 (5060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-10 00:02:31 (5060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-10 00:02:31 (5060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-10 00:02:31 (5060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-10 00:02:31 (5060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-10 00:02:31 (5060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-10 00:02:31 (5060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-10 00:02:31 (5060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-10 00:02:31 (5060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-10 00:02:31 (5060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-10 00:02:31 (5060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-10 00:02:31 (5060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-10 00:02:31 (5060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-10 00:02:31 (5060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-10 00:02:31 (5060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-10 00:02:31 (5060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-10 00:02:45 (5060): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-10 00:02:45 (5060): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-10 00:03:24 (5060): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-10 00:03:24 (5060): Guest Log: 00:00:00.000781 main     Log opened 2026-03-10T00:03:23.381951000Z
2026-03-10 00:03:24 (5060): Guest Log: 00:00:00.001170 main     OS Product: Linux
2026-03-10 00:03:24 (5060): Guest Log: 00:00:00.001319 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-10 00:03:24 (5060): Guest Log: 00:00:00.001568 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-10 00:03:24 (5060): Guest Log: 00:00:00.001710 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-10 00:03:24 (5060): Guest Log: 00:00:00.001714 main     Process ID: 1288
2026-03-10 00:03:24 (5060): Guest Log: 00:00:00.001717 main     Package type: LINUX_64BITS_GENERIC
2026-03-10 00:03:24 (5060): Guest Log: 00:00:00.006677 main     5.2.32 r132073 started. Verbose level = 0
2026-03-10 00:03:25 (5060): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-10 00:03:25 (5060): Guest Log: [INFO] Mounting shared directory
2026-03-10 00:03:25 (5060): Guest Log: [INFO] Checking for init_data.xml
2026-03-10 00:03:33 (5060): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-10 00:03:33 (5060): Guest Log: [INFO] Detected branch: prod
2026-03-10 00:03:33 (5060): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-10 00:03:33 (5060): Guest Log: Copying input files
2026-03-10 00:03:34 (5060): Guest Log: 00:00:10.013559 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 265 856 000ns (GuestNow=1 773 115 414 660 281 000 ns GuestLast=1 773 101 003 394 425 000 ns fSetTimeLastLoop=true )
2026-03-10 00:03:41 (5060): Guest Log: Copied input files into RunAtlas.
2026-03-10 00:03:41 (5060): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-10 00:03:41 (5060): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-10 00:03:41 (5060): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-10 00:03:41 (5060): Guest Log: Further information can be found at the LHC@home message board.
2026-03-10 00:03:57 (5060): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-10 00:03:57 (5060): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-10 00:03:57 (5060): Guest Log: 2.6.3.0 1570 0 30072 157100 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-03-10 00:04:01 (5060): Guest Log: copied the webapp to /var/www
2026-03-10 00:04:01 (5060): Guest Log: ATHENA_PROC_NUMBER=2
2026-03-10 00:04:01 (5060): Guest Log: ATHENA_CORE_NUMBER=2
2026-03-10 00:04:02 (5060): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-10 00:04:02 (5060): Guest Log:  *** Starting ATLAS job. (PandaID=7041481377 taskID=48955006) ***
2026-03-10 01:42:45 (5060): Status Report: Elapsed Time: '6000.000000'
2026-03-10 01:42:45 (5060): Status Report: CPU Time: '11092.968750'
2026-03-10 03:23:15 (5060): Status Report: Elapsed Time: '12000.389193'
2026-03-10 03:23:15 (5060): Status Report: CPU Time: '23073.828125'
2026-03-10 05:03:37 (5060): Status Report: Elapsed Time: '18000.389193'
2026-03-10 05:03:37 (5060): Status Report: CPU Time: '35048.328125'
2026-03-10 06:43:55 (5060): Status Report: Elapsed Time: '24000.389193'
2026-03-10 06:43:55 (5060): Status Report: CPU Time: '47017.781250'
2026-03-10 07:03:53 (5060): Guest Log:  *** Job finished ***
2026-03-10 07:03:53 (5060): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-10 07:03:53 (5060): Guest Log: 2026-03-10 11:03:27,587 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-10 07:03:53 (5060): Guest Log: 2026-03-10 11:03:27,587 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-10 07:03:53 (5060): Guest Log: 2026-03-10 11:03:44,131 | INFO     | [monitor] cgroup control has ended
2026-03-10 07:03:53 (5060): Guest Log: 2026-03-10 11:03:45,508 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140281424070464)>', '<ExcThread(monitor, started 140280980289280)>']
2026-03-10 07:03:53 (5060): Guest Log: 2026-03-10 11:03:45,625 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-10 07:03:53 (5060): Guest Log: 2026-03-10 11:03:45,625 | INFO     | [monitor] control thread has ended
2026-03-10 07:03:53 (5060): Guest Log: 2026-03-10 11:03:50,516 | INFO     | all workflow threads have been joined
2026-03-10 07:03:53 (5060): Guest Log: 2026-03-10 11:03:50,516 | INFO     | end of generic workflow (traces error code: 0)
2026-03-10 07:03:53 (5060): Guest Log: 2026-03-10 11:03:50,517 | INFO     | traces error code: 0
2026-03-10 07:03:53 (5060): Guest Log: 2026-03-10 11:03:50,518 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-10 07:03:53 (5060): Guest Log: 2026-03-10 11:03:50,861 [wrapper] ==== pilot stdout END ====
2026-03-10 07:03:53 (5060): Guest Log: 2026-03-10 11:03:50,868 [wrapper] ==== wrapper stdout RESUME ====
2026-03-10 07:03:53 (5060): Guest Log: 2026-03-10 11:03:50,875 [wrapper] pilotpid: 5952
2026-03-10 07:03:53 (5060): Guest Log: 2026-03-10 11:03:50,881 [wrapper] Pilot exit status: 0
2026-03-10 07:03:53 (5060): Guest Log: 2026-03-10 11:03:51,299 [wrapper] pandaids: 7041481377
2026-03-10 07:03:53 (5060): Guest Log: 2026-03-10 11:03:51,340 [wrapper] cleanup supervisor_pilot 31401 5953
2026-03-10 07:03:53 (5060): Guest Log: 2026-03-10 11:03:51,348 [wrapper] Test setup, not cleaning
2026-03-10 07:03:53 (5060): Guest Log: 2026-03-10 11:03:51,354 [wrapper] apfmon messages muted
2026-03-10 07:03:53 (5060): Guest Log: 2026-03-10 11:03:51,360 [wrapper] ==== wrapper stdout END ====
2026-03-10 07:03:53 (5060): Guest Log: 2026-03-10 11:03:51,366 [wrapper] ==== wrapper stderr END ====
2026-03-10 07:03:53 (5060): Guest Log:  *** Error codes and diagnostics ***
2026-03-10 07:03:53 (5060): Guest Log:     "exeErrorCode": 0,
2026-03-10 07:03:53 (5060): Guest Log:     "exeErrorDiag": "",
2026-03-10 07:03:53 (5060): Guest Log:     "pilotErrorCode": 0,
2026-03-10 07:03:53 (5060): Guest Log:     "pilotErrorDiag": "",
2026-03-10 07:03:53 (5060): Guest Log:  *** Listing of results directory ***
2026-03-10 07:03:53 (5060): Guest Log: total 185776
2026-03-10 07:03:53 (5060): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  9 23:52 pilot3.tar.gz
2026-03-10 07:03:53 (5060): Guest Log: -rwx------. 1 atlas atlas     36322 Mar 10 00:14 runpilot2-wrapper.sh
2026-03-10 07:03:53 (5060): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar 10 00:15 queuedata.json
2026-03-10 07:03:53 (5060): Guest Log: -rwxr-xr-x. 1 atlas atlas      8149 Mar 10 04:03 init_data.xml
2026-03-10 07:03:53 (5060): Guest Log: -rwxr-xr-x. 1 atlas atlas    597953 Mar 10 04:03 input.tar.gz
2026-03-10 07:03:53 (5060): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar 10 04:03 start_atlas.sh
2026-03-10 07:03:53 (5060): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 10 04:03 EVNT.46701403._000733.pool.root.1 -> /data/./ATLAS.root_0
2026-03-10 07:03:53 (5060): Guest Log: -rw-r--r--. 1 atlas atlas      2564 Mar 10 04:04 pandaJob.out
2026-03-10 07:03:53 (5060): Guest Log: -rw-------. 1 atlas atlas   1006495 Mar 10 04:05 agis_schedconf.cvmfs.json
2026-03-10 07:03:53 (5060): Guest Log: -rw-------. 1 atlas atlas       425 Mar 10 04:05 workernode_map.json
2026-03-10 07:03:53 (5060): Guest Log: drwx------. 5 atlas atlas      4096 Mar 10 04:05 pilot3
2026-03-10 07:03:53 (5060): Guest Log: -rw-------. 1 atlas atlas 178353275 Mar 10 11:02 HITS.48955006._036649.pool.root.1
2026-03-10 07:03:53 (5060): Guest Log: -rw-------. 1 atlas atlas      1026 Mar 10 11:02 memory_monitor_summary.json
2026-03-10 07:03:53 (5060): Guest Log: -rw-------. 1 atlas atlas   1511578 Mar 10 11:02 agis_ddmendpoints.agis.ALL.json
2026-03-10 07:03:53 (5060): Guest Log: -rw-------. 1 atlas atlas    522048 Mar 10 11:02 log.48955006._036649.job.log.tgz.1
2026-03-10 07:03:53 (5060): Guest Log: -rw-------. 1 atlas atlas      6368 Mar 10 11:02 heartbeat.json
2026-03-10 07:03:53 (5060): Guest Log: -rw-------. 1 atlas atlas        95 Mar 10 11:03 pilot_heartbeat.json
2026-03-10 07:03:53 (5060): Guest Log: -rw-------. 1 atlas atlas      4801 Mar 10 11:03 pilotlog.txt
2026-03-10 07:03:53 (5060): Guest Log: -rw-------. 1 atlas atlas   3486253 Mar 10 11:03 log.48955006._036649.job.log.1
2026-03-10 07:03:53 (5060): Guest Log: -rw-------. 1 atlas atlas       357 Mar 10 11:03 output.list
2026-03-10 07:03:53 (5060): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 10 11:03 runtime_log
2026-03-10 07:03:53 (5060): Guest Log: -rw-------. 1 atlas atlas   4024320 Mar 10 11:03 result.tar.gz
2026-03-10 07:03:53 (5060): Guest Log: -rw-r--r--. 1 atlas atlas      8785 Mar 10 11:03 runtime_log.err
2026-03-10 07:03:53 (5060): Guest Log: -rw-------. 1 atlas atlas       669 Mar 10 11:03 kS4NDmbvzJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmPYbLDmAOiOSn.diag
2026-03-10 07:03:53 (5060): Guest Log: Looking for outputfile HITS.48955006._036649.pool.root.1
2026-03-10 07:03:53 (5060): Guest Log: HITS file was successfully produced
2026-03-10 07:03:53 (5060): Guest Log: -rw-------. 1 atlas atlas 178353275 Mar 10 11:02 /home/atlas/RunAtlas/HITS.48955006._036649.pool.root.1
2026-03-10 07:03:54 (5060): Guest Log: Successfully finished the ATLAS job!
2026-03-10 07:03:54 (5060): Guest Log: Copying the results back to the shared directory!
2026-03-10 07:03:54 (5060): Guest Log:  *** Contents of shared directory: ***
2026-03-10 07:03:55 (5060): Guest Log: total 607796
2026-03-10 07:03:55 (5060): Guest Log: -rwxrwxrwx. 1 root root 439374319 Mar 10 04:02 ATLAS.root_0
2026-03-10 07:03:55 (5060): Guest Log: -rwxrwxrwx. 1 root root 178353275 Mar 10 11:03 HITS.pool.root.1
2026-03-10 07:03:55 (5060): Guest Log: -rwxrwxrwx. 1 root root      8149 Mar 10 04:02 init_data.xml
2026-03-10 07:03:55 (5060): Guest Log: -rwxrwxrwx. 1 root root    597953 Mar 10 04:00 input.tar.gz
2026-03-10 07:03:55 (5060): Guest Log: -rwxrwxrwx. 1 root root   4024320 Mar 10 11:03 result.tar.gz
2026-03-10 07:03:55 (5060): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar 10 04:00 start_atlas.sh
2026-03-10 07:03:55 (5060): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-10 07:03:55 (5060): VM Completion File Detected.
2026-03-10 07:03:55 (5060): Powering off VM.
2026-03-10 07:03:57 (5060): Successfully stopped VM.
2026-03-10 07:03:57 (5060): Deregistering VM. (boinc_213a47ce6bc39520, slot#0)
2026-03-10 07:03:57 (5060): Removing network bandwidth throttle group from VM.
2026-03-10 07:03:57 (5060): Removing VM from VirtualBox.
2026-03-10 07:04:03 (5060): called boinc_finish(0)

</stderr_txt>
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