Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:01:56 (339586): wrapper (7.7.26015): starting
09:01:56 (339586): wrapper: running run_atlas (--nthreads 4)
[2026-03-16 09:01:56] Arguments: --nthreads 4
[2026-03-16 09:01:56] Threads: 4
[2026-03-16 09:01:56] Checking for CVMFS
[2026-03-16 09:01:56] No cvmfs_config command found, will try listing directly
[2026-03-16 09:01:56] CVMFS is ok
[2026-03-16 09:01:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-16 09:01:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-16 09:01:56] Further information can be found at the LHC@home message board.
[2026-03-16 09:01:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 09:01:56] Checking for apptainer binary...
[2026-03-16 09:01:56] which: no apptainer in ((null))
[2026-03-16 09:01:56] apptainer is not installed, using version from CVMFS
[2026-03-16 09:01:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 09:01:56] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot32/slots/10/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2026-03-16 09:01:56] apptainer works
[2026-03-16 09:01:56] Set ATHENA_PROC_NUMBER=4
[2026-03-16 09:01:56] Set ATHENA_CORE_NUMBER=4
[2026-03-16 09:01:56] Starting ATLAS job with PandaID=7041795439
[2026-03-16 09:01:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot32/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-16 11:46:43]  *** The last 200 lines of the pilot log: ***
[2026-03-16 11:46:43] 2026-03-16 10:46:08,812 | INFO     | log transfer has been attempted: DONE
[2026-03-16 11:46:43] 2026-03-16 10:46:08,813 | INFO     | job 7041795439 has finished - writing final server update
[2026-03-16 11:46:43] 2026-03-16 10:46:08,817 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3370556/.job.ad'
[2026-03-16 11:46:43] 2026-03-16 10:46:08,817 | INFO     | total number of processed events: 400 (read)
[2026-03-16 11:46:43] 2026-03-16 10:46:08,852 | INFO     | using path: /var/lib/boinc/var/slot32/slots/10/PanDA_Pilot-7041795439/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 11:46:43] 2026-03-16 10:46:08,853 | INFO     | extracted standard info from prmon json
[2026-03-16 11:46:43] 2026-03-16 10:46:08,853 | INFO     | extracted standard memory fields from prmon json
[2026-03-16 11:46:43] 2026-03-16 10:46:08,853 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 11:46:43] 2026-03-16 10:46:08,853 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-16 11:46:43] 2026-03-16 10:46:08,853 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 11:46:43] 2026-03-16 10:46:08,857 | INFO     | fitting pss+swap vs Time
[2026-03-16 11:46:43] 2026-03-16 10:46:08,857 | INFO     | sum of square deviations: 1294014960.0
[2026-03-16 11:46:43] 2026-03-16 10:46:08,858 | INFO     | sum of deviations: 13399831387.0
[2026-03-16 11:46:43] 2026-03-16 10:46:08,858 | INFO     | mean x: 1773653051.0
[2026-03-16 11:46:43] 2026-03-16 10:46:08,859 | INFO     | mean y: 2289114.1739130435
[2026-03-16 11:46:43] 2026-03-16 10:46:08,859 | INFO     | intersect: -18364308303.24552
[2026-03-16 11:46:43] 2026-03-16 10:46:08,859 | INFO     | chi2: 2.229278792449862
[2026-03-16 11:46:43] 2026-03-16 10:46:08,859 | INFO     | sum of square deviations: 1177156955.0
[2026-03-16 11:46:43] 2026-03-16 10:46:08,860 | INFO     | sum of deviations: 23185940088.499996
[2026-03-16 11:46:43] 2026-03-16 10:46:08,860 | INFO     | mean x: 1773652898.5
[2026-03-16 11:46:43] 2026-03-16 10:46:08,860 | INFO     | mean y: 2301541.5833333335
[2026-03-16 11:46:43] 2026-03-16 10:46:08,861 | INFO     | intersect: -34932555418.43468
[2026-03-16 11:46:43] 2026-03-16 10:46:08,861 | INFO     | chi2: 1.365418429344005
[2026-03-16 11:46:43] 2026-03-16 10:46:08,861 | INFO     | current chi2=1.365418429344005 (change=38.75066528383913 %)
[2026-03-16 11:46:43] 2026-03-16 10:46:08,861 | INFO     | sum of square deviations: 1067554900.0
[2026-03-16 11:46:43] 2026-03-16 10:46:08,862 | INFO     | sum of deviations: 22329592961.0
[2026-03-16 11:46:43] 2026-03-16 10:46:08,862 | INFO     | mean x: 1773652746.0
[2026-03-16 11:46:43] 2026-03-16 10:46:08,862 | INFO     | mean y: 2300349.609271523
[2026-03-16 11:46:43] 2026-03-16 10:46:08,862 | INFO     | intersect: -37096441712.5928
[2026-03-16 11:46:43] 2026-03-16 10:46:08,863 | INFO     | chi2: 1.3663562856700027
[2026-03-16 11:46:43] 2026-03-16 10:46:08,863 | INFO     | current chi2=1.3663562856700027 (change=-0.06868636791787054 %)
[2026-03-16 11:46:43] 2026-03-16 10:46:08,863 | INFO     | right removable region: 150
[2026-03-16 11:46:43] 2026-03-16 10:46:08,863 | INFO     | sum of square deviations: 1177156955.0
[2026-03-16 11:46:43] 2026-03-16 10:46:08,871 | INFO     | sum of deviations: -7563367521.5
[2026-03-16 11:46:43] 2026-03-16 10:46:08,871 | INFO     | mean x: 1773653203.5
[2026-03-16 11:46:43] 2026-03-16 10:46:08,871 | INFO     | mean y: 2316050.1987179485
[2026-03-16 11:46:43] 2026-03-16 10:46:08,871 | INFO     | intersect: 11398239913.00793
[2026-03-16 11:46:43] 2026-03-16 10:46:08,872 | INFO     | chi2: 0.8923465584293598
[2026-03-16 11:46:43] 2026-03-16 10:46:08,872 | INFO     | current chi2=0.8923465584293598 (change=59.971513592128275 %)
[2026-03-16 11:46:43] 2026-03-16 10:46:08,872 | INFO     | sum of square deviations: 1067554900.0
[2026-03-16 11:46:43] 2026-03-16 10:46:08,873 | INFO     | sum of deviations: -7108827638.0
[2026-03-16 11:46:43] 2026-03-16 10:46:08,873 | INFO     | mean x: 1773653356.0
[2026-03-16 11:46:43] 2026-03-16 10:46:08,873 | INFO     | mean y: 2315410.509933775
[2026-03-16 11:46:43] 2026-03-16 10:46:08,873 | INFO     | intersect: 11813039146.932531
[2026-03-16 11:46:43] 2026-03-16 10:46:08,873 | INFO     | chi2: 0.8926270254745456
[2026-03-16 11:46:43] 2026-03-16 10:46:08,873 | INFO     | current chi2=0.8926270254745456 (change=-0.03143028261121583 %)
[2026-03-16 11:46:43] 2026-03-16 10:46:08,874 | INFO     | left removable region: 20
[2026-03-16 11:46:43] 2026-03-16 10:46:08,874 | INFO     | sum of square deviations: 681212772.5
[2026-03-16 11:46:43] 2026-03-16 10:46:08,874 | INFO     | sum of deviations: 1803524353.0
[2026-03-16 11:46:43] 2026-03-16 10:46:08,875 | INFO     | mean x: 1773653325.5
[2026-03-16 11:46:43] 2026-03-16 10:46:08,875 | INFO     | mean y: 2330492.0
[2026-03-16 11:46:43] 2026-03-16 10:46:08,875 | INFO     | intersect: -4693451935.242563
[2026-03-16 11:46:43] 2026-03-16 10:46:08,875 | INFO     | chi2: 0.000229000143419728
[2026-03-16 11:46:43] 2026-03-16 10:46:08,875 | INFO     | current memory leak: 2.65 B/s (using 130 data points, chi2=0.00)
[2026-03-16 11:46:43] 2026-03-16 10:46:08,876 | INFO     | could have reported an average CPU frequency of 2708 MHz (9 samples)
[2026-03-16 11:46:43] 2026-03-16 10:46:08,876 | INFO     | ..............................
[2026-03-16 11:46:43] 2026-03-16 10:46:08,876 | INFO     | . Timing measurements:
[2026-03-16 11:46:43] 2026-03-16 10:46:08,876 | INFO     | . get job = 0 s
[2026-03-16 11:46:43] 2026-03-16 10:46:08,876 | INFO     | . initial setup = 9 s
[2026-03-16 11:46:43] 2026-03-16 10:46:08,876 | INFO     | . payload setup = 10 s
[2026-03-16 11:46:43] 2026-03-16 10:46:08,876 | INFO     | . stage-in = 0 s
[2026-03-16 11:46:43] 2026-03-16 10:46:08,876 | INFO     | . payload execution = 9797 s
[2026-03-16 11:46:43] 2026-03-16 10:46:08,876 | INFO     | . stage-out = 1 s
[2026-03-16 11:46:43] 2026-03-16 10:46:08,876 | INFO     | . log creation = 0 s
[2026-03-16 11:46:43] 2026-03-16 10:46:08,876 | INFO     | ..............................
[2026-03-16 11:46:43] 2026-03-16 10:46:08,992 | INFO     | 
[2026-03-16 11:46:43] 2026-03-16 10:46:08,992 | INFO     | job summary report
[2026-03-16 11:46:43] 2026-03-16 10:46:08,992 | INFO     | --------------------------------------------------
[2026-03-16 11:46:43] 2026-03-16 10:46:08,992 | INFO     | PanDA job id: 7041795439
[2026-03-16 11:46:43] 2026-03-16 10:46:08,993 | INFO     | task id: 48955015
[2026-03-16 11:46:43] 2026-03-16 10:46:08,993 | INFO     | errors: (none)
[2026-03-16 11:46:43] 2026-03-16 10:46:08,993 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-16 11:46:43] 2026-03-16 10:46:08,993 | INFO     | pilot state: finished 
[2026-03-16 11:46:43] 2026-03-16 10:46:08,993 | INFO     | transexitcode: 0
[2026-03-16 11:46:43] 2026-03-16 10:46:08,993 | INFO     | exeerrorcode: 0
[2026-03-16 11:46:43] 2026-03-16 10:46:08,993 | INFO     | exeerrordiag: 
[2026-03-16 11:46:43] 2026-03-16 10:46:08,993 | INFO     | exitcode: 0
[2026-03-16 11:46:43] 2026-03-16 10:46:08,993 | INFO     | exitmsg: OK
[2026-03-16 11:46:43] 2026-03-16 10:46:08,993 | INFO     | cpuconsumptiontime: 36607 s
[2026-03-16 11:46:43] 2026-03-16 10:46:08,993 | INFO     | nevents: 400
[2026-03-16 11:46:43] 2026-03-16 10:46:08,994 | INFO     | neventsw: 0
[2026-03-16 11:46:43] 2026-03-16 10:46:08,994 | INFO     | pid: 353228
[2026-03-16 11:46:43] 2026-03-16 10:46:08,994 | INFO     | pgrp: 353228
[2026-03-16 11:46:43] 2026-03-16 10:46:08,994 | INFO     | corecount: 4
[2026-03-16 11:46:43] 2026-03-16 10:46:08,994 | INFO     | event service: False
[2026-03-16 11:46:43] 2026-03-16 10:46:08,994 | INFO     | sizes: {0: 2279817, 1: 2280278, 12: 2280278, 9811: 2309014, 9813: 2318036, 9814: 2318092, 9816: 2318478}
[2026-03-16 11:46:43] 2026-03-16 10:46:08,994 | INFO     | --------------------------------------------------
[2026-03-16 11:46:43] 2026-03-16 10:46:08,994 | INFO     | 
[2026-03-16 11:46:43] 2026-03-16 10:46:08,994 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot32/slots/10
[2026-03-16 11:46:43] 2026-03-16 10:46:09,037 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-16 11:46:43] 2026-03-16 10:46:09,038 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-16 11:46:43] 2026-03-16 10:46:09,038 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-16 11:46:43] 2026-03-16 10:46:09,038 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-16 11:46:43] 2026-03-16 10:46:09,038 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-16 11:46:43] 2026-03-16 10:46:09,038 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-16 11:46:43] 2026-03-16 10:46:09,038 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-16 11:46:43] 2026-03-16 10:46:09,038 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-16 11:46:43] 2026-03-16 10:46:09,038 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-16 11:46:43] 2026-03-16 10:46:09,038 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-16 11:46:43] 2026-03-16 10:46:09,039 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-16 11:46:43] 2026-03-16 10:46:09,039 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-16 11:46:43] 2026-03-16 10:46:09,039 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-16 11:46:43] 2026-03-16 10:46:09,039 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-16 11:46:43] 2026-03-16 10:46:09,039 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-16 11:46:43] 2026-03-16 10:46:09,039 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-16 11:46:43] 2026-03-16 10:46:09,039 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-16 11:46:43] 2026-03-16 10:46:09,039 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-16 11:46:43] 2026-03-16 10:46:09,039 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-16 11:46:43] 2026-03-16 10:46:09,039 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-16 11:46:43] 2026-03-16 10:46:09,040 | INFO     | job 7041795439 has completed (purged errors)
[2026-03-16 11:46:43] 2026-03-16 10:46:09,040 | INFO     | overall cleanup function is called
[2026-03-16 11:46:43] 2026-03-16 10:46:10,049 | INFO     | --- collectZombieJob: --- 10, [353228]
[2026-03-16 11:46:43] 2026-03-16 10:46:10,049 | INFO     | zombie collector waiting for pid 353228
[2026-03-16 11:46:43] 2026-03-16 10:46:10,049 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-16 11:46:43] 2026-03-16 10:46:10,049 | INFO     | collected zombie processes
[2026-03-16 11:46:43] 2026-03-16 10:46:10,049 | INFO     | will attempt to kill all subprocesses of pid=353228
[2026-03-16 11:46:43] 2026-03-16 10:46:10,950 | INFO     | process IDs to be killed: [353228] (in reverse order)
[2026-03-16 11:46:43] 2026-03-16 10:46:11,422 | WARNING  | found no corresponding commands to process id(s)
[2026-03-16 11:46:43] 2026-03-16 10:46:11,422 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-16 11:46:43] 2026-03-16 10:46:11,467 | INFO     | did not find any defunct processes belonging to 353228
[2026-03-16 11:46:43] 2026-03-16 10:46:11,499 | INFO     | did not find any defunct processes belonging to 353228
[2026-03-16 11:46:43] 2026-03-16 10:46:11,499 | INFO     | ready for new job
[2026-03-16 11:46:43] 2026-03-16 10:46:11,499 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-16 11:46:43] 2026-03-16 10:46:11,502 | INFO     | **************************************
[2026-03-16 11:46:43] 2026-03-16 10:46:11,503 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-16 11:46:43] 2026-03-16 10:46:11,503 | INFO     | **************************************
[2026-03-16 11:46:43] 2026-03-16 10:46:11,503 | INFO     | 
[2026-03-16 11:46:43] 2026-03-16 10:46:11,512 | INFO     | architecture information:
[2026-03-16 11:46:43] 2026-03-16 10:46:11,512 | INFO     | executing command: cat /etc/os-release
[2026-03-16 11:46:43] 2026-03-16 10:46:11,540 | INFO     | cat /etc/os-release:
[2026-03-16 11:46:43] NAME="CentOS Linux"
[2026-03-16 11:46:43] VERSION="7 (Core)"
[2026-03-16 11:46:43] ID="centos"
[2026-03-16 11:46:43] ID_LIKE="rhel fedora"
[2026-03-16 11:46:43] VERSION_ID="7"
[2026-03-16 11:46:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-16 11:46:43] ANSI_COLOR="0;31"
[2026-03-16 11:46:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-16 11:46:43] HOME_URL="https://www.centos.org/"
[2026-03-16 11:46:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-16 11:46:43] 
[2026-03-16 11:46:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-16 11:46:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-16 11:46:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-16 11:46:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-16 11:46:43] 
[2026-03-16 11:46:43] 2026-03-16 10:46:11,540 | INFO     | **************************************
[2026-03-16 11:46:43] 2026-03-16 10:46:12,043 | INFO     | executing command: df -mP /var/lib/boinc/var/slot32/slots/10
[2026-03-16 11:46:43] 2026-03-16 10:46:12,071 | INFO     | sufficient remaining disk space (137730457600 B)
[2026-03-16 11:46:43] 2026-03-16 10:46:12,071 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-16 11:46:43] 2026-03-16 10:46:12,071 | INFO     | current server update state: UPDATING_FINAL
[2026-03-16 11:46:43] 2026-03-16 10:46:12,071 | INFO     | update_server=False
[2026-03-16 11:46:43] 2026-03-16 10:46:12,071 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-16 11:46:43] 2026-03-16 10:46:12,072 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-16 11:46:43] 2026-03-16 10:46:12,350 | INFO     | all data control threads have been joined
[2026-03-16 11:46:43] 2026-03-16 10:46:12,479 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-16 11:46:43] 2026-03-16 10:46:12,479 | INFO     | aborting loop
[2026-03-16 11:46:43] 2026-03-16 10:46:12,864 | INFO     | all job control threads have been joined
[2026-03-16 11:46:43] 2026-03-16 10:46:13,076 | INFO     | [job] retrieve thread has finished
[2026-03-16 11:46:43] 2026-03-16 10:46:13,128 | INFO     | [job] create_data_payload thread has finished
[2026-03-16 11:46:43] 2026-03-16 10:46:13,227 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-16 11:46:43] 2026-03-16 10:46:13,355 | INFO     | [data] control thread has finished
[2026-03-16 11:46:43] 2026-03-16 10:46:13,373 | INFO     | all payload control threads have been joined
[2026-03-16 11:46:43] 2026-03-16 10:46:13,484 | INFO     | [job] job monitor thread has finished
[2026-03-16 11:46:43] 2026-03-16 10:46:13,532 | INFO     | [data] copytool_in thread has finished
[2026-03-16 11:46:43] 2026-03-16 10:46:13,541 | INFO     | [payload] failed_post thread has finished
[2026-03-16 11:46:43] 2026-03-16 10:46:13,568 | INFO     | [payload] execute_payloads thread has finished
[2026-03-16 11:46:43] 2026-03-16 10:46:13,869 | INFO     | [job] control thread has finished
[2026-03-16 11:46:43] 2026-03-16 10:46:14,004 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-16 11:46:43] 2026-03-16 10:46:14,078 | INFO     | [data] copytool_out thread has finished
[2026-03-16 11:46:43] 2026-03-16 10:46:14,134 | INFO     | [job] validate thread has finished
[2026-03-16 11:46:43] 2026-03-16 10:46:14,178 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-16 11:46:43] 2026-03-16 10:46:14,378 | INFO     | [payload] control thread has finished
[2026-03-16 11:46:43] 2026-03-16 10:46:14,422 | INFO     | [payload] validate_pre thread has finished
[2026-03-16 11:46:43] 2026-03-16 10:46:14,483 | INFO     | [payload] validate_post thread has finished
[2026-03-16 11:46:43] 2026-03-16 10:46:15,009 | INFO     | [job] queue monitor thread has finished
[2026-03-16 11:46:43] 2026-03-16 10:46:17,233 | INFO     | [data] queue_monitor thread has finished
[2026-03-16 11:46:43] 2026-03-16 10:46:37,180 | INFO     | [monitor] cgroup control has ended
[2026-03-16 11:46:43] 2026-03-16 10:46:38,321 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22531287488320)>', '<ExcThread(monitor, started 22531049535232)>']
[2026-03-16 11:46:43] 2026-03-16 10:46:42,202 | INFO     | PID=344123 has CPU usage=11.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-16 11:46:43] 2026-03-16 10:46:42,203 | INFO     | .. there are 25 such processes running
[2026-03-16 11:46:43] 2026-03-16 10:46:42,204 | INFO     | found 0 job(s) in 20 queues
[2026-03-16 11:46:43] 2026-03-16 10:46:42,204 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-16 11:46:43] 2026-03-16 10:46:42,204 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-16 11:46:43] 2026-03-16 10:46:42,204 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-16 11:46:43] 2026-03-16 10:46:42,204 | INFO     | [monitor] control thread has ended
[2026-03-16 11:46:43] 2026-03-16 10:46:43,347 | INFO     | all workflow threads have been joined
[2026-03-16 11:46:43] 2026-03-16 10:46:43,347 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-16 11:46:43] 2026-03-16 10:46:43,347 | INFO     | traces error code: 0
[2026-03-16 11:46:43] 2026-03-16 10:46:43,348 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-16 11:46:43] 2026-03-16 10:46:43,581 [wrapper] ==== pilot stdout END ====
[2026-03-16 11:46:43] 2026-03-16 10:46:43,585 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-16 11:46:43] 2026-03-16 10:46:43,589 [wrapper] pilotpid: 344123
[2026-03-16 11:46:43] 2026-03-16 10:46:43,593 [wrapper] Pilot exit status: 0
[2026-03-16 11:46:43] 2026-03-16 10:46:43,609 [wrapper] pandaids: 7041795439
[2026-03-16 11:46:43] 2026-03-16 10:46:43,828 [wrapper] cleanup supervisor_pilot  709315 344124
[2026-03-16 11:46:43] 2026-03-16 10:46:43,833 [wrapper] Test setup, not cleaning
[2026-03-16 11:46:43] 2026-03-16 10:46:43,837 [wrapper] apfmon messages muted
[2026-03-16 11:46:43] 2026-03-16 10:46:43,842 [wrapper] ==== wrapper stdout END ====
[2026-03-16 11:46:43] 2026-03-16 10:46:43,846 [wrapper] ==== wrapper stderr END ====
[2026-03-16 11:46:43]  *** Error codes and diagnostics ***
[2026-03-16 11:46:43]     "exeErrorCode": 0,
[2026-03-16 11:46:43]     "exeErrorDiag": "",
[2026-03-16 11:46:43]     "pilotErrorCode": 0,
[2026-03-16 11:46:43]     "pilotErrorDiag": "",
[2026-03-16 11:46:43]  *** Listing of results directory ***
[2026-03-16 11:46:43] total 609848
[2026-03-16 11:46:43] -rw-r--r--. 1 boinc boinc    584627 Mar 10 04:18 pilot3.tar.gz
[2026-03-16 11:46:43] -rwx------. 1 boinc boinc     36322 Mar 10 04:55 runpilot2-wrapper.sh
[2026-03-16 11:46:43] -rw-r--r--. 1 boinc boinc      5111 Mar 10 04:55 queuedata.json
[2026-03-16 11:46:43] -rw-r--r--. 1 boinc boinc       100 Mar 16 09:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-16 11:46:43] -rwxr-xr-x. 1 boinc boinc      7986 Mar 16 09:01 run_atlas
[2026-03-16 11:46:43] -rw-r--r--. 1 boinc boinc       105 Mar 16 09:01 job.xml
[2026-03-16 11:46:43] -rw-r--r--. 1 boinc boinc      6621 Mar 16 09:01 init_data.xml
[2026-03-16 11:46:43] -rw-r--r--. 2 boinc boinc 438187102 Mar 16 09:01 EVNT.46701403._002287.pool.root.1
[2026-03-16 11:46:43] -rw-r--r--. 2 boinc boinc     15845 Mar 16 09:01 start_atlas.sh
[2026-03-16 11:46:43] drwxrwx--x. 2 boinc boinc      4096 Mar 16 09:01 shared
[2026-03-16 11:46:43] -rw-r--r--. 2 boinc boinc    597962 Mar 16 09:01 input.tar.gz
[2026-03-16 11:46:43] -rw-r--r--. 1 boinc boinc         0 Mar 16 09:01 boinc_lockfile
[2026-03-16 11:46:43] -rw-r--r--. 1 boinc boinc      2572 Mar 16 09:01 pandaJob.out
[2026-03-16 11:46:43] -rw-------. 1 boinc boinc   1006471 Mar 16 09:02 agis_schedconf.cvmfs.json
[2026-03-16 11:46:43] -rw-------. 1 boinc boinc   1511579 Mar 16 09:02 agis_ddmendpoints.agis.ALL.json
[2026-03-16 11:46:43] -rw-------. 1 boinc boinc       443 Mar 16 09:02 workernode_map.json
[2026-03-16 11:46:43] drwx------. 5 boinc boinc      4096 Mar 16 09:02 pilot3
[2026-03-16 11:46:43] -rw-------. 1 boinc boinc 178915956 Mar 16 11:45 HITS.48955015._011851.pool.root.1
[2026-03-16 11:46:43] -rw-r--r--. 1 boinc boinc       530 Mar 16 11:45 boinc_task_state.xml
[2026-03-16 11:46:43] -rw-------. 1 boinc boinc      1037 Mar 16 11:46 memory_monitor_summary.json
[2026-03-16 11:46:43] -rw-------. 1 boinc boinc    376979 Mar 16 11:46 log.48955015._011851.job.log.tgz.1
[2026-03-16 11:46:43] -rw-------. 1 boinc boinc      6349 Mar 16 11:46 heartbeat.json
[2026-03-16 11:46:43] -rw-r--r--. 1 boinc boinc      8192 Mar 16 11:46 boinc_mmap_file
[2026-03-16 11:46:43] -rw-r--r--. 1 boinc boinc        27 Mar 16 11:46 wrapper_checkpoint.txt
[2026-03-16 11:46:43] -rw-------. 1 boinc boinc        95 Mar 16 11:46 pilot_heartbeat.json
[2026-03-16 11:46:43] -rw-------. 1 boinc boinc      4831 Mar 16 11:46 pilotlog.txt
[2026-03-16 11:46:43] -rw-------. 1 boinc boinc   1342141 Mar 16 11:46 log.48955015._011851.job.log.1
[2026-03-16 11:46:43] -rw-------. 1 boinc boinc       357 Mar 16 11:46 output.list
[2026-03-16 11:46:43] -rw-r--r--. 1 boinc boinc       620 Mar 16 11:46 runtime_log
[2026-03-16 11:46:43] -rw-------. 1 boinc boinc   1740800 Mar 16 11:46 result.tar.gz
[2026-03-16 11:46:43] -rw-r--r--. 1 boinc boinc      9221 Mar 16 11:46 runtime_log.err
[2026-03-16 11:46:43] -rw-------. 1 boinc boinc       663 Mar 16 11:46 WdQMDmaM3J9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm0oeLDmLESWem.diag
[2026-03-16 11:46:43] -rw-r--r--. 1 boinc boinc     20863 Mar 16 11:46 stderr.txt
[2026-03-16 11:46:43] HITS file was successfully produced:
[2026-03-16 11:46:43] -rw-------. 1 boinc boinc 178915956 Mar 16 11:45 shared/HITS.pool.root.1
[2026-03-16 11:46:43]  *** Contents of shared directory: ***
[2026-03-16 11:46:43] total 604952
[2026-03-16 11:46:43] -rw-r--r--. 2 boinc boinc 438187102 Mar 16 09:01 ATLAS.root_0
[2026-03-16 11:46:43] -rw-r--r--. 2 boinc boinc     15845 Mar 16 09:01 start_atlas.sh
[2026-03-16 11:46:43] -rw-r--r--. 2 boinc boinc    597962 Mar 16 09:01 input.tar.gz
[2026-03-16 11:46:43] -rw-------. 1 boinc boinc 178915956 Mar 16 11:45 HITS.pool.root.1
[2026-03-16 11:46:43] -rw-------. 1 boinc boinc   1740800 Mar 16 11:46 result.tar.gz
11:46:45 (339586): run_atlas exited; CPU time 37202.922302
11:46:45 (339586): called boinc_finish(0)

</stderr_txt>
]]>

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