Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:05 (912917): wrapper (7.7.26015): starting
00:02:05 (912917): wrapper: running run_atlas (--nthreads 9)
[2026-03-10 00:02:06] Arguments: --nthreads 9
[2026-03-10 00:02:06] Threads: 9
[2026-03-10 00:02:06] Checking for CVMFS
[2026-03-10 00:02:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-10 00:02:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-10 00:02:07] Running cvmfs_config stat atlas.cern.ch
[2026-03-10 00:02:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-10 00:02:08] 2.13.3.0 11793 179304 410596 157100 1 184 19179251 32935936 29034 16776704 0 650044272 99.531 824891499 34195 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-10 00:02:08] CVMFS is ok
[2026-03-10 00:02:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 00:02:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 00:02:08] Further information can be found at the LHC@home message board.
[2026-03-10 00:02:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 00:02:08] Checking for apptainer binary...
[2026-03-10 00:02:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-10 00:02:08] Running /usr/bin/apptainer --version
[2026-03-10 00:02:08] apptainer version 1.4.5-2.el9
[2026-03-10 00:02:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 00:02:09] c6-2-11-2.aglt2.org
[2026-03-10 00:02:09] apptainer works
[2026-03-10 00:02:09] Set ATHENA_PROC_NUMBER=9
[2026-03-10 00:02:09] Set ATHENA_CORE_NUMBER=9
[2026-03-10 00:02:09] Starting ATLAS job with PandaID=7035659226
[2026-03-10 00:02:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 10:06:33]  *** The last 200 lines of the pilot log: ***
[2026-03-10 10:06:33] 2026-03-10 14:05:30,295 | INFO     | preparing for final server update for job 7035659226 in state='finished'
[2026-03-10 10:06:33] 2026-03-10 14:05:30,295 | INFO     | reading metadata from: /tmp/boinchome/slots/7/PanDA_Pilot-7035659226/jobReport.json
[2026-03-10 10:06:33] 2026-03-10 14:05:30,297 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/7/workernode_map.json
[2026-03-10 10:06:33] 2026-03-10 14:05:30,298 | INFO     | this job has now completed (state=finished)
[2026-03-10 10:06:33] 2026-03-10 14:05:30,298 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 10:06:33] 2026-03-10 14:05:30,298 | INFO     | log transfer has been attempted: DONE
[2026-03-10 10:06:33] 2026-03-10 14:05:30,298 | INFO     | job 7035659226 has finished - writing final server update
[2026-03-10 10:06:33] 2026-03-10 14:05:30,320 | INFO     | total number of processed events: 400 (read)
[2026-03-10 10:06:33] 2026-03-10 14:05:30,324 | INFO     | monitor loop #1923: job 0:7035659226 is in state 'finished'
[2026-03-10 10:06:33] 2026-03-10 14:05:30,324 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-10 10:06:33] 2026-03-10 14:05:30,425 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-7035659226/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 10:06:33] 2026-03-10 14:05:30,426 | INFO     | extracted standard info from prmon json
[2026-03-10 10:06:33] 2026-03-10 14:05:30,426 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 10:06:33] 2026-03-10 14:05:30,426 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 10:06:33] 2026-03-10 14:05:30,427 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 10:06:33] 2026-03-10 14:05:30,427 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 10:06:33] 2026-03-10 14:05:30,493 | INFO     | fitting pss+swap vs Time
[2026-03-10 10:06:33] 2026-03-10 14:05:30,495 | INFO     | sum of square deviations: 63683584918.75233
[2026-03-10 10:06:33] 2026-03-10 14:05:30,504 | INFO     | sum of deviations: 481536321233.75903
[2026-03-10 10:06:33] 2026-03-10 14:05:30,504 | INFO     | mean x: 1773133519.7355933
[2026-03-10 10:06:33] 2026-03-10 14:05:30,504 | INFO     | mean y: 2540462.0305084744
[2026-03-10 10:06:33] 2026-03-10 14:05:30,505 | INFO     | intersect: -13404810792.442062
[2026-03-10 10:06:33] 2026-03-10 14:05:30,505 | INFO     | chi2: 6.232256116892292
[2026-03-10 10:06:33] 2026-03-10 14:05:30,506 | INFO     | sum of square deviations: 62078211165.972565
[2026-03-10 10:06:33] 2026-03-10 14:05:30,513 | INFO     | sum of deviations: 556479992937.0393
[2026-03-10 10:06:33] 2026-03-10 14:05:30,514 | INFO     | mean x: 1773133367.2376068
[2026-03-10 10:06:33] 2026-03-10 14:05:30,514 | INFO     | mean y: 2547541.970940171
[2026-03-10 10:06:33] 2026-03-10 14:05:30,514 | INFO     | intersect: -15892131527.28786
[2026-03-10 10:06:33] 2026-03-10 14:05:30,515 | INFO     | chi2: 4.745522004101594
[2026-03-10 10:06:33] 2026-03-10 14:05:30,515 | INFO     | current chi2=4.745522004101594 (change=23.855471997708214 %)
[2026-03-10 10:06:33] 2026-03-10 14:05:30,515 | INFO     | right removable region: 584
[2026-03-10 10:06:33] 2026-03-10 14:05:30,515 | INFO     | sum of square deviations: 62078126375.97255
[2026-03-10 10:06:33] 2026-03-10 14:05:30,523 | INFO     | sum of deviations: 295598010658.7534
[2026-03-10 10:06:33] 2026-03-10 14:05:30,523 | INFO     | mean x: 1773133672.2376068
[2026-03-10 10:06:33] 2026-03-10 14:05:30,525 | INFO     | mean y: 2558111.1384615386
[2026-03-10 10:06:33] 2026-03-10 14:05:30,525 | INFO     | intersect: -8440589527.872016
[2026-03-10 10:06:33] 2026-03-10 14:05:30,526 | INFO     | chi2: 2.805896174560299
[2026-03-10 10:06:33] 2026-03-10 14:05:30,527 | INFO     | current chi2=2.805896174560299 (change=54.97784234259846 %)
[2026-03-10 10:06:33] 2026-03-10 14:05:30,527 | INFO     | sum of square deviations: 60499948892.63968
[2026-03-10 10:06:33] 2026-03-10 14:05:30,538 | INFO     | sum of deviations: 218420087364.51013
[2026-03-10 10:06:33] 2026-03-10 14:05:30,539 | INFO     | mean x: 1773133824.736207
[2026-03-10 10:06:33] 2026-03-10 14:05:30,539 | INFO     | mean y: 2565559.8137931037
[2026-03-10 10:06:33] 2026-03-10 14:05:30,539 | INFO     | intersect: -6398895135.55164
[2026-03-10 10:06:33] 2026-03-10 14:05:30,539 | INFO     | chi2: 2.239242518059813
[2026-03-10 10:06:33] 2026-03-10 14:05:30,540 | INFO     | current chi2=2.239242518059813 (change=20.195104210842164 %)
[2026-03-10 10:06:33] 2026-03-10 14:05:30,540 | INFO     | left removable region: 20
[2026-03-10 10:06:33] 2026-03-10 14:05:30,540 | INFO     | sum of square deviations: 55629901833.163185
[2026-03-10 10:06:33] 2026-03-10 14:05:30,547 | INFO     | sum of deviations: 197827681937.75903
[2026-03-10 10:06:33] 2026-03-10 14:05:30,547 | INFO     | mean x: 1773133946.7375886
[2026-03-10 10:06:33] 2026-03-10 14:05:30,547 | INFO     | mean y: 2582579.8226950355
[2026-03-10 10:06:33] 2026-03-10 14:05:30,547 | INFO     | intersect: -6302928788.869604
[2026-03-10 10:06:33] 2026-03-10 14:05:30,548 | INFO     | chi2: 0.3317747998428423
[2026-03-10 10:06:33] 2026-03-10 14:05:30,548 | INFO     | current memory leak: 3.56 B/s (using 564 data points, chi2=0.33)
[2026-03-10 10:06:33] 2026-03-10 14:05:30,549 | INFO     | could have reported an average CPU frequency of 2673 MHz (23 samples)
[2026-03-10 10:06:33] 2026-03-10 14:05:30,549 | INFO     | ..............................
[2026-03-10 10:06:33] 2026-03-10 14:05:30,550 | INFO     | . Timing measurements:
[2026-03-10 10:06:33] 2026-03-10 14:05:30,550 | INFO     | . get job = 1 s
[2026-03-10 10:06:33] 2026-03-10 14:05:30,550 | INFO     | . initial setup = 47 s
[2026-03-10 10:06:33] 2026-03-10 14:05:30,550 | INFO     | . payload setup = 46 s
[2026-03-10 10:06:33] 2026-03-10 14:05:30,550 | INFO     | . stage-in = 0 s
[2026-03-10 10:06:33] 2026-03-10 14:05:30,550 | INFO     | . payload execution = 35992 s
[2026-03-10 10:06:33] 2026-03-10 14:05:30,550 | INFO     | . stage-out = 6 s
[2026-03-10 10:06:33] 2026-03-10 14:05:30,550 | INFO     | . log creation = 1 s
[2026-03-10 10:06:33] 2026-03-10 14:05:30,550 | INFO     | ..............................
[2026-03-10 10:06:33] 2026-03-10 14:05:30,564 | INFO     | time since job start (36070s) is within the limit (349056.0s)
[2026-03-10 10:06:33] 2026-03-10 14:05:30,897 | INFO     | 
[2026-03-10 10:06:33] 2026-03-10 14:05:30,898 | INFO     | job summary report
[2026-03-10 10:06:33] 2026-03-10 14:05:30,898 | INFO     | --------------------------------------------------
[2026-03-10 10:06:33] 2026-03-10 14:05:30,898 | INFO     | PanDA job id: 7035659226
[2026-03-10 10:06:33] 2026-03-10 14:05:30,898 | INFO     | task id: 48838432
[2026-03-10 10:06:33] 2026-03-10 14:05:30,898 | INFO     | errors: (none)
[2026-03-10 10:06:33] 2026-03-10 14:05:30,898 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 10:06:33] 2026-03-10 14:05:30,898 | INFO     | pilot state: finished 
[2026-03-10 10:06:33] 2026-03-10 14:05:30,898 | INFO     | transexitcode: 0
[2026-03-10 10:06:33] 2026-03-10 14:05:30,898 | INFO     | exeerrorcode: 0
[2026-03-10 10:06:33] 2026-03-10 14:05:30,898 | INFO     | exeerrordiag: 
[2026-03-10 10:06:33] 2026-03-10 14:05:30,898 | INFO     | exitcode: 0
[2026-03-10 10:06:33] 2026-03-10 14:05:30,898 | INFO     | exitmsg: OK
[2026-03-10 10:06:33] 2026-03-10 14:05:30,898 | INFO     | cpuconsumptiontime: 54786 s
[2026-03-10 10:06:33] 2026-03-10 14:05:30,898 | INFO     | nevents: 400
[2026-03-10 10:06:33] 2026-03-10 14:05:30,899 | INFO     | neventsw: 0
[2026-03-10 10:06:33] 2026-03-10 14:05:30,899 | INFO     | pid: 965243
[2026-03-10 10:06:33] 2026-03-10 14:05:30,899 | INFO     | pgrp: 965243
[2026-03-10 10:06:33] 2026-03-10 14:05:30,899 | INFO     | corecount: 9
[2026-03-10 10:06:33] 2026-03-10 14:05:30,899 | INFO     | event service: False
[2026-03-10 10:06:33] 2026-03-10 14:05:30,899 | INFO     | sizes: {0: 2279820, 2: 2279848, 3: 2279848, 4: 2280309, 15: 2280309, 36043: 2320363, 36044: 2320490, 36051: 2329544, 36052: 2329600, 36055: 2329794}
[2026-03-10 10:06:33] 2026-03-10 14:05:30,899 | INFO     | --------------------------------------------------
[2026-03-10 10:06:33] 2026-03-10 14:05:30,899 | INFO     | 
[2026-03-10 10:06:33] 2026-03-10 14:05:30,899 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2026-03-10 10:06:33] 2026-03-10 14:05:31,062 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 10:06:33] 2026-03-10 14:05:31,063 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 10:06:33] 2026-03-10 14:05:31,063 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 10:06:33] 2026-03-10 14:05:31,063 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 10:06:33] 2026-03-10 14:05:31,063 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 10:06:33] 2026-03-10 14:05:31,063 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 10:06:33] 2026-03-10 14:05:31,063 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 10:06:33] 2026-03-10 14:05:31,063 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 10:06:33] 2026-03-10 14:05:31,063 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 10:06:33] 2026-03-10 14:05:31,063 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 10:06:33] 2026-03-10 14:05:31,063 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 10:06:33] 2026-03-10 14:05:31,064 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 10:06:33] 2026-03-10 14:05:31,064 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 10:06:33] 2026-03-10 14:05:31,064 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 10:06:33] 2026-03-10 14:05:31,064 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 10:06:33] 2026-03-10 14:05:31,064 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 10:06:33] 2026-03-10 14:05:31,064 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 10:06:33] 2026-03-10 14:05:31,064 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 10:06:33] 2026-03-10 14:05:31,064 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 10:06:33] 2026-03-10 14:05:31,064 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 10:06:33] 2026-03-10 14:05:31,064 | INFO     | job 7035659226 has completed (purged errors)
[2026-03-10 10:06:33] 2026-03-10 14:05:31,064 | INFO     | overall cleanup function is called
[2026-03-10 10:06:33] 2026-03-10 14:05:32,083 | INFO     | --- collectZombieJob: --- 10, [965243]
[2026-03-10 10:06:33] 2026-03-10 14:05:32,083 | INFO     | zombie collector waiting for pid 965243
[2026-03-10 10:06:33] 2026-03-10 14:05:32,084 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 10:06:33] 2026-03-10 14:05:32,084 | INFO     | collected zombie processes
[2026-03-10 10:06:33] 2026-03-10 14:05:32,084 | INFO     | will attempt to kill all subprocesses of pid=965243
[2026-03-10 10:06:33] 2026-03-10 14:05:34,085 | INFO     | process IDs to be killed: [965243] (in reverse order)
[2026-03-10 10:06:33] 2026-03-10 14:05:34,410 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 10:06:33] 2026-03-10 14:05:34,411 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 10:06:33] 2026-03-10 14:05:34,521 | INFO     | did not find any defunct processes belonging to 965243
[2026-03-10 10:06:33] 2026-03-10 14:05:34,618 | INFO     | did not find any defunct processes belonging to 965243
[2026-03-10 10:06:33] 2026-03-10 14:05:34,619 | INFO     | ready for new job
[2026-03-10 10:06:33] 2026-03-10 14:05:34,619 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 10:06:33] 2026-03-10 14:05:34,642 | INFO     | **************************************
[2026-03-10 10:06:33] 2026-03-10 14:05:34,642 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 10:06:33] 2026-03-10 14:05:34,643 | INFO     | **************************************
[2026-03-10 10:06:33] 2026-03-10 14:05:34,643 | INFO     | 
[2026-03-10 10:06:33] 2026-03-10 14:05:34,689 | INFO     | architecture information:
[2026-03-10 10:06:33] 2026-03-10 14:05:34,693 | INFO     | executing command: cat /etc/os-release
[2026-03-10 10:06:33] 2026-03-10 14:05:34,771 | INFO     | cat /etc/os-release:
[2026-03-10 10:06:33] NAME="CentOS Linux"
[2026-03-10 10:06:33] VERSION="7 (Core)"
[2026-03-10 10:06:33] ID="centos"
[2026-03-10 10:06:33] ID_LIKE="rhel fedora"
[2026-03-10 10:06:33] VERSION_ID="7"
[2026-03-10 10:06:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 10:06:33] ANSI_COLOR="0;31"
[2026-03-10 10:06:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 10:06:33] HOME_URL="https://www.centos.org/"
[2026-03-10 10:06:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 10:06:33] 
[2026-03-10 10:06:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 10:06:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 10:06:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 10:06:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 10:06:33] 
[2026-03-10 10:06:33] 2026-03-10 14:05:34,772 | INFO     | **************************************
[2026-03-10 10:06:33] 2026-03-10 14:05:35,274 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2026-03-10 10:06:33] 2026-03-10 14:05:35,376 | INFO     | sufficient remaining disk space (93189046272 B)
[2026-03-10 10:06:33] 2026-03-10 14:05:35,376 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 10:06:33] 2026-03-10 14:05:35,376 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 10:06:33] 2026-03-10 14:05:35,376 | INFO     | update_server=False
[2026-03-10 10:06:33] 2026-03-10 14:05:35,376 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 10:06:33] 2026-03-10 14:05:35,377 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 10:06:33] 2026-03-10 14:05:35,436 | INFO     | all payload control threads have been joined
[2026-03-10 10:06:33] 2026-03-10 14:05:35,453 | INFO     | all job control threads have been joined
[2026-03-10 10:06:33] 2026-03-10 14:05:35,738 | INFO     | all data control threads have been joined
[2026-03-10 10:06:33] 2026-03-10 14:05:35,874 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 10:06:33] 2026-03-10 14:05:36,376 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 10:06:33] 2026-03-10 14:05:36,376 | INFO     | aborting loop
[2026-03-10 10:06:33] 2026-03-10 14:05:36,401 | INFO     | [job] retrieve thread has finished
[2026-03-10 10:06:33] 2026-03-10 14:05:36,442 | INFO     | [payload] control thread has finished
[2026-03-10 10:06:33] 2026-03-10 14:05:36,446 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 10:06:33] 2026-03-10 14:05:36,461 | INFO     | [job] control thread has finished
[2026-03-10 10:06:33] 2026-03-10 14:05:36,744 | INFO     | [data] control thread has finished
[2026-03-10 10:06:33] 2026-03-10 14:05:36,763 | INFO     | [payload] failed_post thread has finished
[2026-03-10 10:06:33] 2026-03-10 14:05:36,880 | INFO     | [job] queue monitor thread has finished
[2026-03-10 10:06:33] 2026-03-10 14:05:37,177 | INFO     | [payload] validate_post thread has finished
[2026-03-10 10:06:33] 2026-03-10 14:05:37,382 | INFO     | [job] job monitor thread has finished
[2026-03-10 10:06:33] 2026-03-10 14:05:37,407 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 10:06:33] 2026-03-10 14:05:37,408 | INFO     | [data] copytool_out thread has finished
[2026-03-10 10:06:33] 2026-03-10 14:05:37,455 | INFO     | [job] validate thread has finished
[2026-03-10 10:06:33] 2026-03-10 14:05:37,869 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 10:06:33] 2026-03-10 14:05:37,881 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 10:06:33] 2026-03-10 14:05:37,887 | INFO     | [data] copytool_in thread has finished
[2026-03-10 10:06:33] 2026-03-10 14:05:38,334 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 10:06:33] 2026-03-10 14:05:42,343 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 10:06:33] 2026-03-10 14:06:08,741 | INFO     | PID=931453 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-10 10:06:33] 2026-03-10 14:06:08,741 | INFO     | .. there are 37 such processes running
[2026-03-10 10:06:33] 2026-03-10 14:06:08,741 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 10:06:33] 2026-03-10 14:06:08,741 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 10:06:33] 2026-03-10 14:06:08,742 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 10:06:33] 2026-03-10 14:06:24,996 | INFO     | [monitor] cgroup control has ended
[2026-03-10 10:06:33] 2026-03-10 14:06:25,968 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139760173422400)>', '<ExcThread(monitor, started 139759687026432)>']
[2026-03-10 10:06:33] 2026-03-10 14:06:26,849 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 10:06:33] 2026-03-10 14:06:26,849 | INFO     | [monitor] control thread has ended
[2026-03-10 10:06:33] 2026-03-10 14:06:30,994 | INFO     | all workflow threads have been joined
[2026-03-10 10:06:33] 2026-03-10 14:06:30,994 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 10:06:33] 2026-03-10 14:06:30,995 | INFO     | traces error code: 0
[2026-03-10 10:06:33] 2026-03-10 14:06:30,995 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 10:06:33] 2026-03-10 14:06:31,916 [wrapper] ==== pilot stdout END ====
[2026-03-10 10:06:33] 2026-03-10 14:06:31,926 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 10:06:33] 2026-03-10 14:06:31,936 [wrapper] pilotpid: 931453
[2026-03-10 10:06:33] 2026-03-10 14:06:31,948 [wrapper] Pilot exit status: 0
[2026-03-10 10:06:33] 2026-03-10 14:06:31,990 [wrapper] pandaids: 7035659226
[2026-03-10 10:06:33] 2026-03-10 14:06:32,777 [wrapper] cleanup supervisor_pilot 3089511 931454
[2026-03-10 10:06:33] 2026-03-10 14:06:32,790 [wrapper] Test setup, not cleaning
[2026-03-10 10:06:33] 2026-03-10 14:06:32,797 [wrapper] apfmon messages muted
[2026-03-10 10:06:33] 2026-03-10 14:06:32,823 [wrapper] ==== wrapper stdout END ====
[2026-03-10 10:06:33] 2026-03-10 14:06:32,843 [wrapper] ==== wrapper stderr END ====
[2026-03-10 10:06:33]  *** Error codes and diagnostics ***
[2026-03-10 10:06:33]     "exeErrorCode": 0,
[2026-03-10 10:06:33]     "exeErrorDiag": "",
[2026-03-10 10:06:33]     "pilotErrorCode": 0,
[2026-03-10 10:06:33]     "pilotErrorDiag": "",
[2026-03-10 10:06:33]  *** Listing of results directory ***
[2026-03-10 10:06:33] total 515496
[2026-03-10 10:06:33] -rw-r--r--. 1 boincer umatlas    584627 Mar  1 17:23 pilot3.tar.gz
[2026-03-10 10:06:33] -rw-r--r--. 1 boincer umatlas      5111 Mar  1 17:23 queuedata.json
[2026-03-10 10:06:33] -rwx------. 1 boincer umatlas     36322 Mar  1 17:23 runpilot2-wrapper.sh
[2026-03-10 10:06:33] -rw-r--r--. 1 boincer umatlas       100 Mar 10 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 10:06:33] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 10 00:02 run_atlas
[2026-03-10 10:06:33] -rw-r--r--. 1 boincer umatlas       105 Mar 10 00:02 job.xml
[2026-03-10 10:06:33] -rw-r--r--. 2 boincer umatlas 284737725 Mar 10 00:02 EVNT.48220101._000199.pool.root.1
[2026-03-10 10:06:33] -rw-r--r--. 2 boincer umatlas     15845 Mar 10 00:02 start_atlas.sh
[2026-03-10 10:06:33] drwxrwx--x. 2 boincer umatlas      4096 Mar 10 00:02 shared
[2026-03-10 10:06:33] -rw-r--r--. 2 boincer umatlas    597980 Mar 10 00:02 input.tar.gz
[2026-03-10 10:06:33] -rw-r--r--. 1 boincer umatlas         0 Mar 10 00:02 boinc_lockfile
[2026-03-10 10:06:33] -rw-r--r--. 1 boincer umatlas      2580 Mar 10 00:02 pandaJob.out
[2026-03-10 10:06:33] -rw-------. 1 boincer umatlas        57 Mar 10 00:02 setup.sh.local
[2026-03-10 10:06:33] -rw-------. 1 boincer umatlas   1006495 Mar 10 00:03 agis_schedconf.cvmfs.json
[2026-03-10 10:06:33] -rw-------. 1 boincer umatlas       443 Mar 10 00:04 workernode_map.json
[2026-03-10 10:06:33] drwx------. 5 boincer umatlas      4096 Mar 10 00:04 pilot3
[2026-03-10 10:06:33] -rw-------. 1 boincer umatlas 229455761 Mar 10 10:03 HITS.48838432._005286.pool.root.1
[2026-03-10 10:06:33] -rw-r--r--. 1 boincer umatlas       531 Mar 10 10:03 boinc_task_state.xml
[2026-03-10 10:06:33] -rw-r--r--. 1 boincer umatlas      6877 Mar 10 10:03 init_data.xml
[2026-03-10 10:06:33] -rw-------. 1 boincer umatlas      1045 Mar 10 10:05 memory_monitor_summary.json
[2026-03-10 10:06:33] -rw-------. 1 boincer umatlas   1511578 Mar 10 10:05 agis_ddmendpoints.agis.ALL.json
[2026-03-10 10:06:33] -rw-------. 1 boincer umatlas        95 Mar 10 10:05 pilot_heartbeat.json
[2026-03-10 10:06:33] -rw-------. 1 boincer umatlas    716895 Mar 10 10:05 log.48838432._005286.job.log.tgz.1
[2026-03-10 10:06:33] -rw-------. 1 boincer umatlas      6398 Mar 10 10:05 heartbeat.json
[2026-03-10 10:06:33] -rw-------. 1 boincer umatlas      4819 Mar 10 10:06 pilotlog.txt
[2026-03-10 10:06:33] -rw-r--r--. 1 boincer umatlas        28 Mar 10 10:06 wrapper_checkpoint.txt
[2026-03-10 10:06:33] -rw-r--r--. 1 boincer umatlas      8192 Mar 10 10:06 boinc_mmap_file
[2026-03-10 10:06:33] -rw-------. 1 boincer umatlas   4148901 Mar 10 10:06 log.48838432._005286.job.log.1
[2026-03-10 10:06:33] -rw-------. 1 boincer umatlas       357 Mar 10 10:06 output.list
[2026-03-10 10:06:33] -rw-r--r--. 1 boincer umatlas       620 Mar 10 10:06 runtime_log
[2026-03-10 10:06:33] -rw-------. 1 boincer umatlas   4884480 Mar 10 10:06 result.tar.gz
[2026-03-10 10:06:33] -rw-r--r--. 1 boincer umatlas      9347 Mar 10 10:06 runtime_log.err
[2026-03-10 10:06:33] -rw-------. 1 boincer umatlas       658 Mar 10 10:06 BZWNDmYN4G9n9Rq4apOajLDm4fhM0noT9bVooX4SDm3q9KDmKxe6Oo.diag
[2026-03-10 10:06:33] -rw-r--r--. 1 boincer umatlas     21405 Mar 10 10:06 stderr.txt
[2026-03-10 10:06:33] HITS file was successfully produced:
[2026-03-10 10:06:33] -rw-------. 1 boincer umatlas 229455761 Mar 10 10:03 shared/HITS.pool.root.1
[2026-03-10 10:06:33]  *** Contents of shared directory: ***
[2026-03-10 10:06:33] total 507524
[2026-03-10 10:06:33] -rw-r--r--. 2 boincer umatlas 284737725 Mar 10 00:02 ATLAS.root_0
[2026-03-10 10:06:33] -rw-r--r--. 2 boincer umatlas     15845 Mar 10 00:02 start_atlas.sh
[2026-03-10 10:06:33] -rw-r--r--. 2 boincer umatlas    597980 Mar 10 00:02 input.tar.gz
[2026-03-10 10:06:33] -rw-------. 1 boincer umatlas 229455761 Mar 10 10:03 HITS.pool.root.1
[2026-03-10 10:06:33] -rw-------. 1 boincer umatlas   4884480 Mar 10 10:06 result.tar.gz
10:06:35 (912917): run_atlas exited; CPU time 56727.423257
10:06:35 (912917): called boinc_finish(0)

</stderr_txt>
]]>

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